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"Candidatus Liberibacter solanacearum" MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

This MLST scheme was developed by Minna Haapalainen and colleagues at the Department of Agricultural Sciences, University of Helsinki, Finland. It is described in Haapalainen et al. 2018 Phytopathology 108:925-934.

Database curated by Minna Haapalainen.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Candidatus Liberibacter solanacearum MLST website (https://pubmlst.org/ liberibacter/) sited at the University of Oxford (Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved]). The development of this site has been funded by the Wellcome Trust.


Sequence database
Sequences: 41
Profiles (MLST): 10
Last updated: 2019-01-15

Isolate database
Isolates: 10
Last updated: 2019-02-08