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Welcome to PubMLST - Public databases for molecular typing and microbial genome diversity.

Please contact us if you would like us to host a MLST database for a particular organism, or have a request for new functionality.

The primary PubMLST site is hosted at The Department of Zoology, University of Oxford, UK and is funded by The Wellcome Trust.


2018-11-15: A MLST scheme for Pseudomonas putida has been developed by Kohei Ogura at Kanazawa University, Japan, and is now available.

2018-10-30: A MLST scheme for Treponema pallidum subsp. pallidum has been developed by Linda Grillová and colleagues at the Masaryk University, Brno, Czech Republic and University of Zurich, Zurich, Switzerland, and is now available.

2018-10-26: A MLST scheme for Piscirickettsia salmonis has been developed by Adolfo Isla and colleagues at Universidad Austral de Chile, and is now available.

2018-10-15: A new paper describing the PubMLST website and its underlying genomics platform, BIGSdb, has been published in Wellcome Open Research.

Latest updates