Candidatus Liberibacter solanacearum samples database
The Candidatus Liberibacter solanacearum PubMLST database contains data for a collection of isolates that represent the total known diversity of this species. For every allelic profile in the profiles/sequence definition database there is at least one corresponding isolate deposited here. Any sample may be submitted to this database and consequently it should be noted that it does not represent a population sample.
Projects
Option settings
- Set general options - including isolate table field handling.
- Set display and query options for locus, schemes or scheme fields.
Submissions
General information
- Isolates: 10
- Last updated: 2019-02-08
- Defined field values
- Update history
- About BIGSdb
Export
- Export dataset
- Sequences - XMFA / concatenated FASTA formats
Analysis
Third party tools
- GrapeTree - Visualization of genomic relationships
- iTOL - Phylogenetic trees with data overlays
- PhyloViz - Visualization and phylogenetic inference
- Microreact - Open data visualization and sharing for genomic epidemiology