Achromobacter spp.

Source of isolates submitted to the Achromobacter spp. database

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The MLST scheme hosted in this database was developed by tspilkermed.umich.edu (Theodore Spilker, )Peter Vandamme and jlipumamed.umich.edu (John Lipuma), University of Michigan, USA. It is descibed in Spilker et al. 2012 J Clin Microbiol 9:3010-5.

The database is curated by aliwiensmed.umich.edu (Amy Bumford).

Primers

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:

Last updated:

2022-03-07