MLST databases and software - PubMLST.org

Welcome to PubMLST - Public databases for molecular typing and microbial genome diversity.

Databases
Download MLST definitions - allelic profiles and sequences from all publicly accessible databases
BIGSdb - software that runs most of the databases on this site
MLST schemes hosted on other sites
Information about all species MLST databases and published schemes
Recent publications that use or mention MLST
News and updates
Site map
Policy document
International mirrors of this site: Primary | NL1 | NO1 | UK2 | UK4 | US1 | US2

Please contact us if you would like us to host or help develop a MLST database for a particular organism, or have a request for new functionality.

The primary PubMLST site is hosted at The Department of Zoology, University of Oxford, UK and is funded by The Wellcome Trust.

News

2014-06-17: A MLST scheme for Citrobacter freundii, first developed by Li Bai and colleagues, has been set up by Piotr Majewski, Piotr Wieczorek, and colleagues at the Medical University of Bialystok, Poland, and is now available.

2014-05-08: A MLST scheme for Carnobacterium maltaromaticum has been developed by Frédéric Borges, Abdur Rahman and colleagues at the Laboratoire d'Ingénierie des Biomolécules, Université de Lorraine, France and is now available.

2014-03-14: A MLST scheme for Melissococcus plutonius has been developed by Edward Haynes, Giles Budge and colleagues at the Food and Environment Agency, UK and is now available.