Welcome to PubMLST. This site hosts publicly accessible Multilocus Sequence Typing (MLST) databases and software. We provide means of accessing these databases in common formats suitable for easy linking and importation to local resources.
- MLST allelic profiles and allele sequences from publicly accessible databases
- Software
- Data analysis - web based tools
- Databases hosted on PubMLST
Bacterial MLSTBacterial MLST
- Acinetobacter baumannii
- Arcobacter spp.
- Bacillus cereus
- Bordetella spp.
- Brachyspira hyodysenteriae
- Brachyspira intermedia
- Brachyspira spp.
- Burkholderia cepacia complex
- Campylobacter fetus
- Campylobacter helveticus
- Campylobacter insulaenigrae
- Campylobacter jejuni and Campylobacter coli
- Campylobacter lari
- Campylobacter upsaliensis
- Chlamydiales spp.
- Clostridium botulinum
- Clostridium difficile
- Clostridium septicum
- Corynebacterium diphtheriae
- Cronobacter spp.
- Helicobacter pylori
- Mannheimia haemolytica
- Neisseria spp.
- Pasteurella multocida
- Porphyromonas gingivalis
- Propionibacterium acnes
- Pseudomonas aeruginosa
- Sinorhizobium spp.
- Stenotrophomonas maltophilia
- Streptococcus agalactiae
- Streptococcus oralis
- Streptococcus uberis
- Streptococcus zooepidemicus
- Streptomyces spp.
- Vibrio parahaemolyticus
- Vibrio vulnificus
- Wolbachia spp.
- Xylella fastidiosa
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Eukaryote MLSTEukaryote MLST
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Other databasesOther databases
- All species MLST databases (local and externally hosted) and published schemes
- Recent publications that use or mention MLST
- News and updates
- International mirrors of this site: Primary | UK1 | UK2 | UK3 | US1
Please contact us if you would like us to host or help develop a MLST database for a particular organism, or have a request for new functionality.