Recent database update activity
2025-08-28:- Acinetobacter baumannii: 103 isolates; 21 genomes; 1 allele; 2 MLST (Pasteur) profiles
- Aeromonas spp.: 32 isolates; 32 genomes; 58 alleles; 12 MLST profiles
- Borrelia spp.: 1 isolate; 461 alleles
- Brachyspira spp.: 1 isolate; 1 Brachyspira MLST profile
- Burkholderia cepacia complex: 232 isolates; 160 alleles
- Campylobacter jejuni/coli: 1 isolate; 1 MLST profile
- Chlamydiales spp.: 777 isolates; 3 alleles
- Cronobacter spp.: 193 isolates
- Enterobacter spp.: 2 isolates
- Enterococcus faecium: 9 alleles; 27 MLST profiles; 30 MLST (Bezdíček et al.) profiles
- Escherichia spp.: 4 isolates; 2 alleles; 4 MLST (Achtman) profiles
- Haemophilus influenzae: 28 isolates; 19 genomes
- Mycobacteria spp.: 54 isolates; 54 genomes
- Neisseria spp.: 38 isolates; 37 genomes; 8 MLST profiles
- Pasteurella multocida: 2 isolates
- Ribosomal MLST: 11 isolates; 123 alleles; 97 rMLST profiles
- Staphylococcus aureus: 9 isolates
- Staphylococcus hominis: 6 isolates
- Streptococcus agalactiae: 13 isolates
- Streptococcus pneumoniae: 16 isolates; 1 genome; 62 alleles; 6 cgMLST profiles; 1 MLST profile
- Vibrio cholerae: 1 isolate; 1 allele; 1 MLST profile
- Yersinia pseudotuberculosis: 1 allele; 2 MLST profiles
- Acinetobacter baumannii: 77 isolates; 1 allele
- Borrelia spp.: 1,476 alleles; 1 cgMLST profile
- Burkholderia cepacia complex: 24 isolates; 59 alleles
- Campylobacter jejuni/coli: 4 isolates; 1 allele; 4 MLST profiles
- Chlamydiales spp.: 34 alleles
- Clostridioides difficile: 2 isolates; 2 MLST profiles
- Edwardsiella spp.: 1 allele
- Enterobacter spp.: 2 genomes; 1 MLST profile
- Escherichia spp.: 5 isolates; 4 genomes; 7 alleles; 12 MLST (Achtman) profiles
- Flavobacterium psychrophilum: 14 MLST profiles
- Mycoplasma genitalium: 11 isolates; 11 MG191-MG309 typing profiles
- Neisseria spp.: 28 isolates; 49 alleles; 1 MLST profile; 8 NG MAST v2.0 profiles; 3 N. meningitidis cgMLST v3 profiles
- Proteus spp.: 1 isolate
- Pseudomonas aeruginosa: 359 isolates; 4 genomes; 234 alleles; 16 MLST profiles
- Ribosomal MLST: 32 isolates; 12 alleles
- Salmonella spp.: 2 alleles; 3 MLST profiles
- Serratia spp.: 2 isolates; 2 MLST profiles
- Staphylococcus aureus: 5 isolates; 9 alleles; 12 MLST profiles
- Streptococcus pneumoniae: 4 isolates; 6 genomes; 128 alleles; 37 cgMLST profiles; 1 MLST profile
- Streptococcus pyogenes: 7,132 cgMLST profiles
- Streptococcus suis: 1 isolate; 3 alleles; 1 MLST profile
- Vibrio parahaemolyticus: 1 isolate; 1 genome; 1 allele; 1 cgMLST profile
- Xylella fastidiosa: 1 isolate
- Achromobacter spp.: 5 isolates; 2 alleles; 1 MLST profile
- Actinobacillus spp.: 248 isolates
- Burkholderia cepacia complex: 6 isolates; 4 alleles; 4 MLST profiles
- Campylobacter jejuni/coli: 7 C. jejuni / C. coli cgMLST v1 profiles
- Enterococcus faecium: 6 isolates; 6 genomes; 753 alleles; 4 MLST profiles
- Escherichia spp.: 26 isolates; 9,272 alleles; 4 MLST (Achtman) profiles
- Haemophilus influenzae: 3 isolates; 3 MLST profiles
- Mycoplasma bovis: 10 isolates; 10 genomes
- Mycoplasma genitalium: 1 allele
- Mycoplasma synoviae: 43 isolates
- Neisseria spp.: 5 isolates; 5 genomes; 230 alleles; 1 N. meningitidis cgMLST v3 profile
- Ribosomal MLST: 1,182 isolates; 192 rMLST profiles
- Salmonella spp.: 3 alleles; 4 MLST profiles
- Staphylococcus aureus: 5 isolates; 13 genomes; 410 alleles; 2 MLST profiles
- Streptococcus pneumoniae: 36 isolates; 1 genome; 104 alleles; 116 cgMLST profiles; 2 MLST profiles
- Xylella fastidiosa: 7 isolates