Recent database update activity
2026-02-14:- Cronobacter spp.: 2 isolates
- Escherichia spp.: 22 isolates
- Neisseria spp.: 1 allele
- Staphylococcus capitis: 6 alleles
- Streptococcus pneumoniae: 23 cgMLST profiles
- Vibrio parahaemolyticus: 67 isolates
- Acinetobacter baumannii: 3 isolates; 4 alleles; 3 MLST (Pasteur) profiles
- Bacillus cereus: 1 isolate; 1 MLST profile
- Campylobacter jejuni/coli: 32 isolates; 563 alleles; 30 C. jejuni / C. coli cgMLST v1 profiles; 31 C. jejuni / C. coli cgMLST v2 profiles
- Candida albicans: 3 alleles
- Chlamydiales spp.: 942 isolates; 33 alleles
- Citrobacter spp.: 1 isolate; 2 MLST profiles
- Cronobacter spp.: 4 isolates; 4 genomes
- Escherichia spp.: 22 genomes; 20 alleles; 34 MLST (Achtman) profiles
- Haemophilus influenzae: 659 isolates; 1 allele; 35 cgMLST v1 profiles; 29 H. parainfluenzae cgMLST v1 profiles
- Mycoplasma genitalium: 13 isolates
- Neisseria spp.: 85 isolates; 35 genomes; 911 alleles; 55 MLST profiles; 1 N. meningitidis cgMLST v3 profile
- Pseudomonas putida: 1 isolate; 1 MLST profile
- Ribosomal MLST: 11 alleles
- Streptococcus pneumoniae: 2,235 isolates; 23 genomes; 231 alleles; 7 MLST profiles
- Treponema pallidum: 7 alleles
- Campylobacter jejuni/coli: 7 isolates; 39 genomes; 3 alleles; 1 MLST profile
- Chlamydiales spp.: 238 isolates; 2 alleles
- Clostridium botulinum: 40 isolates
- Clostridium perfringens: 10 isolates; 26 alleles; 6 cgMLST profiles; 12 MLST profiles
- Cronobacter spp.: 23 isolates; 20 genomes; 19 alleles
- Escherichia spp.: 2 isolates; 4 alleles; 11 MLST (Achtman) profiles
- Haemophilus influenzae: 69 isolates; 69 genomes; 15,442 alleles; 32 H. parainfluenzae cgMLST v1 profiles
- Klebsiella oxytoca: 1 isolate; 1 allele; 1 MLST profile
- Mycoplasma genitalium: 112 isolates; 125 genomes; 125 alleles
- Neisseria spp.: 10 isolates; 2 genomes; 44 alleles; 1 MLST profile; 17 N. meningitidis cgMLST v3 profiles
- Salmonella spp.: 2 alleles; 3 MLST profiles
- Staphylococcus capitis: 4 alleles
- Staphylococcus pseudintermedius: 8 isolates; 8 MLST profiles
- Streptococcus pneumoniae: 2,607 isolates
- Yersinia pseudotuberculosis: 1 allele; 1 MLST profile