Recent database update activity
2023-06-08:- Anaplasma phagocytophilum: 14 isolates
- Enterobacter cloacae: 3 isolates
- Enterococcus faecium: 7 isolates; 6 genomes; 184 alleles; 3 MLST profiles
- Escherichia spp.: 1 allele; 3 MLST (Achtman) profiles
- Neisseria spp.: 93 isolates; 3,052 alleles; 105 N. meningitidis cgMLST v2 profiles
- Pasteurella multocida: 1 isolate; 1 genome
- Ribosomal MLST: 4 isolates; 19 alleles
- Salmonella spp.: 4 alleles; 6 MLST profiles
- Staphylococcus aureus: 647 isolates; 652 alleles
- Staphylococcus haemolyticus: 4 isolates
- Streptococcus thermophilus: 12 alleles
- Anaplasma phagocytophilum: 30 isolates
- Borrelia spp.: 2 alleles
- Burkholderia cepacia complex: 16 isolates; 2 alleles; 30 MLST profiles
- Campylobacter jejuni/coli: 56 C. jejuni / C. coli cgMLST v1.0 profiles
- Citrobacter spp.: 6 isolates; 5 genomes; 8 alleles; 5 MLST profiles
- Enterobacter cloacae: 127 isolates; 134 alleles; 92 MLST profiles
- Enterococcus faecalis: 3 isolates
- Escherichia spp.: 2 alleles; 3 MLST (Achtman) profiles
- Klebsiella aerogenes: 1 isolate; 1 genome; 1 allele; 1 MLST profile
- Klebsiella oxytoca: 1 isolate; 1 genome; 1 MLST profile
- Neisseria spp.: 32,332 isolates; 93 genomes; 10 alleles; 3 MLST profiles; 2 NG MAST v2.0 profiles; 74 N. meningitidis cgMLST v2 profiles
- Pasteurella multocida: 1 Multiple host MLST profile
- Ribosomal MLST: 18 isolates; 45 alleles
- Salmonella spp.: 3 alleles; 4 MLST profiles
- Staphylococcus aureus: 163 isolates; 636 alleles
- Streptococcus zooepidemicus: 3 alleles; 1 MLST profile
- Anaplasma phagocytophilum: 587 isolates
- Borrelia spp.: 1 isolate; 1 MLST profile
- Burkholderia cepacia complex: 1 isolate; 11 alleles; 1 MLST profile
- Campylobacter jejuni/coli: 55,755 isolates; 61 genomes; 631 alleles; 8 MLST profiles
- Campylobacter non-jejuni/coli: 10 isolates; 1 C. fetus MLST profile
- Enterobacter cloacae: 38 isolates; 164 genomes; 33 alleles; 24 MLST profiles
- Escherichia spp.: 20,615 alleles; 4 MLST (Achtman) profiles; 6 MLST (Pasteur) profiles
- Lactococcus garvieae: 16 alleles
- Mycoplasma hominis: 4 alleles
- Neisseria spp.: 5 isolates; 2,088 alleles; 5 NG MAST v2.0 profiles; 22 N. meningitidis cgMLST v2 profiles
- Pseudomonas aeruginosa: 28 isolates; 25 MLST profiles
- Ribosomal MLST: 10 alleles; 20 rMLST profiles
- Salmonella spp.: 7 alleles; 7 MLST profiles; 3 SalmcgMLST v1.0 profiles
- Staphylococcus aureus: 188 isolates; 838 alleles; 1 MLST profile
- Staphylococcus pseudintermedius: 2 alleles
- Streptococcus suis: 26 isolates; 19 alleles; 26 MLST profiles
- Streptococcus thermophilus: 7 alleles
- Streptococcus uberis: 250 isolates
- Vibrio vulnificus: 10 isolates; 8 MLST profiles