Recent database update activity
2026-04-23:- Acinetobacter baumannii: 1 cgMLST v1 profile
- Burkholderia cepacia complex: 1 isolate; 3 alleles
- Enterobacter spp.: 8 isolates; 7 genomes; 4 alleles; 2 MLST profiles
- Flavobacterium psychrophilum: 1 isolate; 1 MLST profile
- Neisseria spp.: 6 isolates; 2 genomes; 1 allele; 8 N. meningitidis cgMLST v3 profiles
- Pseudomonas aeruginosa: 1 isolate; 1 genome; 1 MLST profile
- Streptococcus pneumoniae: 7 cgMLST profiles
- Acinetobacter baumannii: 1 isolate; 1 genome; 2 alleles; 1 MLST (Oxford) profile; 1 MLST (Pasteur) profile
- Burkholderia cepacia complex: 50 isolates; 51 genomes; 2,255 alleles; 5 cgMLST profiles
- Campylobacter jejuni/coli: 166 isolates; 125 alleles; 132 C. jejuni / C. coli cgMLST v1 profiles; 114 C. jejuni / C. coli cgMLST v2 profiles
- Campylobacter non-jejuni/coli: 6 isolates; 6 genomes; 20 alleles
- Escherichia spp.: 3 alleles; 21 MLST (Achtman) profiles
- Flavobacterium psychrophilum: 91 isolates; 91 genomes; 21 MLST profiles
- Leptospira spp.: 1 isolate
- Mycobacteria spp.: 7 isolates; 6 genomes; 2 MLST profiles
- Mycobacteroides abscessus complex: 110 isolates; 110 genomes; 58 alleles
- Neisseria spp.: 19 isolates; 13 genomes; 491 alleles; 2 N. meningitidis cgMLST v3 profiles
- Rhodococcus spp.: 1 allele
- Salmonella spp.: 4 alleles; 5 MLST profiles
- Staphylococcus chromogenes: 49 isolates; 29 MLST profiles
- Streptococcus agalactiae: 1 isolate
- Streptococcus pneumoniae: 23 isolates; 7 genomes; 65 alleles; 67 cgMLST profiles
- Vibrio parahaemolyticus: 2 isolates; 2 alleles
- Acinetobacter baumannii: 1 isolate; 1 genome; 780 alleles; 9 cgMLST v1 profiles; 1 MLST (Oxford) profile
- Campylobacter jejuni/coli: 24 isolates; 190 genomes; 37 C. jejuni / C. coli cgMLST v1 profiles; 27 C. jejuni / C. coli cgMLST v2 profiles
- Enterobacter spp.: 2 alleles
- Enterococcus faecium: 1 isolate; 1 genome; 22 alleles; 1 MLST profile
- Escherichia spp.: 18,982 alleles; 3 MLST (Achtman) profiles
- Flavobacterium psychrophilum: 89 isolates; 89 genomes; 30 alleles; 8 MLST profiles
- Mycobacteria spp.: 1 isolate; 3 alleles; 1 MLST profile
- Mycoplasma hyopneumoniae: 1 isolate; 7 alleles; 1 MLST profile
- Neisseria spp.: 16 isolates; 2 genomes; 22 alleles; 8 NG MAST v2.0 profiles; 7,723 N. gonorrhoeae cgMLST v1.0 profiles; 5,801 N. gonorrhoeae cgMLST v2 profiles; 84 N. meningitidis cgMLST v3 profiles
- Pseudomonas aeruginosa: 1 isolate; 1 genome
- Salmonella spp.: 1 allele; 3 MLST profiles
- Staphylococcus aureus: 2 isolates; 2 genomes; 87 alleles; 2 cgMLST profiles; 2 MLST profiles
- Streptococcus pneumoniae: 1 isolate; 914 alleles; 48 cgMLST profiles
- Vibrio vulnificus: 2 isolates
- Yersinia pseudotuberculosis: 2 MLST profiles