Recent database update activity
2026-06-10:- Acinetobacter baumannii: 1 isolate; 1 allele; 1 MLST (Oxford) profile
- Burkholderia cepacia complex: 1 isolate; 1 MLST profile
- Campylobacter jejuni/coli: 4 isolates; 1 allele
- Enterobacter spp.: 4 isolates; 4 MLST profiles
- Escherichia spp.: 2 isolates; 2 alleles; 6 MLST (Achtman) profiles
- Haemophilus influenzae: 40 isolates; 40 genomes
- Neisseria spp.: 7 isolates; 50 alleles; 5 MLST profiles; 27 N. meningitidis cgMLST v3 profiles
- Salmonella spp.: 1 allele; 2 MLST profiles
- Staphylococcus aureus: 795 isolates; 1 genome; 1 MLST profile
- Streptococcus pneumoniae: 33 cgMLST profiles
- Vibrio parahaemolyticus: 1 isolate; 1 genome; 1 MLST profile
- Acinetobacter baumannii: 5 isolates; 5 alleles; 34 cgMLST v1 profiles; 81 MLST (Pasteur) profiles
- Campylobacter jejuni/coli: 2,010 alleles; 151 C. jejuni / C. coli cgMLST v1 profiles; 129 C. jejuni / C. coli cgMLST v2 profiles
- Citrobacter spp.: 1 isolate; 1 genome; 1 MLST profile
- Clostridium perfringens: 13 MLST profiles
- Enterococcus faecium: 1 isolate; 1 genome; 34 alleles; 1 MLST profile
- Escherichia spp.: 2 genomes; 19,640 alleles; 8 MLST (Achtman) profiles
- Flavobacterium psychrophilum: 1 isolate
- Mycoplasma hyopneumoniae: 1 isolate
- Neisseria spp.: 32 isolates; 748 alleles; 11 MLST profiles; 28 N. meningitidis cgMLST v3 profiles
- Salmonella spp.: 6 alleles; 7 MLST profiles
- Staphylococcus aureus: 1 MLST profile
- Streptococcus pneumoniae: 36 isolates; 36 genomes; 315 alleles
- Streptococcus pyogenes: 82 cgMLST profiles
- Tenacibaculum spp.: 8 isolates; 4 MLST profiles
- Yersinia pseudotuberculosis: 2 MLST profiles
- Acinetobacter baumannii: 87 isolates; 92 genomes; 23,969 alleles
- Actinobacillus spp.: 1 allele
- Bacillus cereus: 5 B. cereus cgMLST profiles
- Campylobacter jejuni/coli: 4 genomes; 1 MLST profile
- Chlamydiales spp.: 3 alleles; 2 MLST (C. trachomatis Uppsala) profiles
- Clostridium perfringens: 14 isolates; 6 alleles; 12 cgMLST profiles
- Enterobacter spp.: 5 alleles
- Escherichia spp.: 21 alleles; 35 MLST (Achtman) profiles
- Haemophilus influenzae: 12 isolates; 12 genomes; 85 alleles; 15 cgMLST v1 profiles; 6 H. parainfluenzae cgMLST v1 profiles
- Helicobacter pylori: 30 isolates; 30 genomes; 172 alleles; 29 MLST profiles
- Lactococcus garvieae: 5 MLST profiles
- Mycoplasma genitalium: 9 isolates; 9 MG191-MG309 typing profiles
- Neisseria spp.: 5 isolates; 32 genomes; 1,364 alleles; 5 NG MAST v2.0 profiles
- Salmonella spp.: 9 alleles; 14 MLST profiles
- Staphylococcus aureus: 2 isolates; 1 genome; 42 alleles; 1 cgMLST profile; 5 MLST profiles