Recent database update activity
2025-11-12:- Bacillus cereus: 2 alleles
- Bacteroides fragilis: 5 MLST profiles
- Escherichia spp.: 3 alleles; 3 MLST (Achtman) profiles
- Glaesserella parasuis: 1 isolate; 1 MLST profile
- Leptospira spp.: 10 alleles
- Mycoplasma gallisepticum: 2 isolates; 2 MLST#1 (Ghanem) profiles; 1 MLST#2 (Bekő) profile
- Mycoplasma synoviae: 1 allele
- Neisseria spp.: 68 isolates; 13 genomes; 287 alleles; 42 NG MAST v2.0 profiles
- Pseudomonas aeruginosa: 19 isolates; 1 genome; 1 allele; 16 MLST profiles
- Ribosomal MLST: 1 allele
- Salmonella spp.: 3 MLST profiles
- Staphylococcus aureus: 147 isolates; 2 genomes; 54 alleles; 2 cgMLST profiles; 60 MLST profiles
- Staphylococcus chromogenes: 6 alleles
- Streptococcus pneumoniae: 6 isolates; 6 genomes; 76 alleles; 2 MLST profiles
- Streptococcus pyogenes: 1 isolate
- Achromobacter spp.: 7 isolates
- Acinetobacter baumannii: 672 isolates; 1 cgMLST v1 profile
- Campylobacter jejuni/coli: 9 C. jejuni / C. coli cgMLST v1 profiles; 10 C. jejuni / C. coli cgMLST v2 profiles
- Candida albicans: 4 alleles; 5 MLST profiles
- Chlamydiales spp.: 50 isolates
- Clostridium perfringens: 2 cgMLST profiles; 3 MLST profiles
- Cronobacter spp.: 6 isolates; 2 genomes; 380 alleles
- Enterococcus faecalis: 133 isolates
- Enterococcus faecium: 148 isolates; 2 genomes; 190 alleles; 2 MLST profiles
- Escherichia spp.: 3 isolates; 9,788 alleles
- Haemophilus influenzae: 7 isolates
- Leptospira spp.: 5 isolates; 5 MLST (scheme 3) profiles
- Neisseria spp.: 82 isolates; 16 alleles; 529 N. gonorrhoeae cgMLST v1.0 profiles; 484 N. gonorrhoeae cgMLST v2 profiles; 330 N. meningitidis cgMLST v3 profiles
- Pseudomonas putida: 10 alleles; 2 MLST profiles
- Salmonella spp.: 1 allele; 1 MLST profile
- Streptococcus pneumoniae: 154 isolates; 221 cgMLST profiles
- Streptococcus pyogenes: 214 cgMLST profiles
- Achromobacter spp.: 7 genomes; 7 alleles
- Acinetobacter baumannii: 15 isolates; 14 MLST (Oxford) profiles
- Aeromonas spp.: 12 isolates; 12 genomes; 15 alleles; 8 MLST profiles
- Campylobacter jejuni/coli: 10 isolates; 10 genomes; 337 alleles; 1 C. jejuni / C. coli cgMLST v1 profile; 1 C. jejuni / C. coli cgMLST v2 profile
- Candida albicans: 3 isolates; 2 alleles
- Clostridioides difficile: 4 MLST profiles
- Clostridium perfringens: 6 isolates; 3 genomes; 949 alleles
- Cronobacter spp.: 7 isolates; 6 genomes; 73 alleles; 3 MLST profiles
- Escherichia spp.: 13 isolates; 3 genomes; 2 alleles; 2 MLST (Achtman) profiles
- Haemophilus influenzae: 3 isolates; 108 cgMLST v1 profiles; 3 H. parainfluenzae cgMLST v1 profiles; 6 MLST profiles
- Klebsiella oxytoca: 1 isolate; 2 alleles; 1 MLST profile
- Mycoplasma genitalium: 8 isolates; 8 MG191-MG309 typing profiles
- Neisseria spp.: 21 isolates; 23 genomes; 183 alleles; 1 MLST profile; 157 N. gonorrhoeae cgMLST v1.0 profiles; 146 N. gonorrhoeae cgMLST v2 profiles
- Pseudomonas putida: 2 isolates
- Salmonella spp.: 1 allele; 4 MLST profiles
- Staphylococcus aureus: 401 alleles
- Streptococcus agalactiae: 1 isolate
- Streptococcus pneumoniae: 7 isolates
- Vibrio parahaemolyticus: 35 isolates; 13 genomes; 2,927 alleles; 9 cgMLST profiles; 24 MLST profiles