Recent database update activity
2026-10-15:- Burkholderia cepacia complex: 1 MLST profile
- Campylobacter jejuni/coli: 1 isolate; 1 allele; 1 MLST profile
- Chlamydiales spp.: 7 isolates; 2 alleles
- Cronobacter spp.: 156 isolates; 156 genomes; 9 alleles
- Enterococcus faecium: 3 isolates; 2 genomes; 2 alleles; 3 MLST profiles
- Neisseria spp.: 474 isolates; 12 alleles
- Pasteurella multocida: 3 isolates
- Pseudomonas aeruginosa: 28 isolates
- Stenotrophomonas maltophilia: 50 isolates; 49 MLST profiles
- Streptococcus agalactiae: 2 isolates; 2 MLST profiles
- Streptococcus zooepidemicus: 2 alleles
- Achromobacter spp.: 145 isolates; 276 alleles; 937 A. xylosoxidans cgMLST profiles
- Avibacterium paragallinarum: 115 isolates; 6,904 alleles
- Bacillus cereus: 7 MLST profiles
- Burkholderia cepacia complex: 3 alleles
- Chlamydiales spp.: 2 isolates; 1 allele
- Clostridioides difficile: 1 allele
- Cronobacter spp.: 19 isolates; 18 genomes; 519 alleles; 1 MLST profile
- Edwardsiella spp.: 6 isolates
- Enterobacter spp.: 6 isolates; 4 alleles
- Escherichia spp.: 1 allele; 1 MLST (Achtman) profile
- Haemophilus spp.: 1 isolate
- Lactococcus garvieae: 2 MLST profiles
- Mannheimia haemolytica: 1 MLST profile
- Mycoplasma pneumoniae: 3 alleles
- Neisseria spp.: 2,389 isolates; 17 genomes; 4 alleles; 4 MLST profiles; 60 N. meningitidis cgMLST v3 profiles
- Pasteurella multocida: 3 genomes
- Pseudomonas aeruginosa: 1 isolate; 1 allele
- Ribosomal MLST: 1 allele
- Salmonella spp.: 1 allele; 1 MLST profile
- Stenotrophomonas maltophilia: 8 isolates; 25 alleles; 1 MLST profile
- Streptococcus agalactiae: 43 isolates; 1 allele; 1 MLST profile
- Acinetobacter baumannii: 6 isolates; 1 cgMLST v1 profile; 6 MLST (Oxford) profiles
- Campylobacter jejuni/coli: 5 isolates; 5 genomes; 630 alleles; 5 C. jejuni / C. coli cgMLST v2 profiles; 1 MLST profile
- Candida tropicalis: 1 allele; 6 MLST profiles
- Chlamydiales spp.: 24 isolates
- Cronobacter spp.: 19 isolates
- Enterobacter spp.: 6 genomes; 1 MLST profile
- Enterococcus faecalis: 1 isolate; 1 genome; 1 MLST profile
- Escherichia spp.: 33,543 alleles
- Haemophilus spp.: 10 isolates; 10 genomes; 27 alleles; 7 H. influenzae cgMLST v1 profiles
- Mannheimia haemolytica: 1 allele
- Mycobacteria spp.: 10 isolates; 10 genomes; 104 alleles; 6 MTBC cgMLST profiles
- Mycoplasma bovis: 10 isolates
- Mycoplasma genitalium: 4 alleles
- Mycoplasma hyopneumoniae: 2 alleles
- Neisseria spp.: 879 isolates; 78 genomes; 1,755 alleles; 78 Conjugative Plasmid profiles; 1 MLST profile; 7 NG MAST v2.0 profiles
- Proteus spp.: 2 isolates; 2 MLST profiles
- Streptococcus agalactiae: 55 isolates
- Streptococcus pneumoniae: 115 isolates