Taxonomic coverage of the rMLST databases

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Click isolate links to view records (registration required). Click tree links to display Neighbour-joining tree of rSTs belonging to node - trees are pre-generated using RapidNJ and displayed using NCBI Tree Viewer.

Please note that some taxa may appear more than once in the hierarchy. This is caused by a delay in propagating changes in taxonomic placement.

• Abditibacteriota (isolates:1; rSTs:1)
  • Abditibacteriia (isolates:1; rSTs:1)
    • Abditibacteriales (isolates:1; rSTs:1)
      • Abditibacteriaceae (isolates:1; rSTs:1)
        • Abditibacterium (isolates:1; rSTs:1)
          • Abditibacterium utsteinense (isolates:1; rSTs:1)
• Acidobacteriota (isolates:109; rSTs:92 tree)
  • Blastocatellia (isolates:1; rSTs:1 tree)
    • Blastocatellales (isolates:1; rSTs:1)
      • Pyrinomonadaceae (isolates:1; rSTs:1)
        • Pyrinomonas (isolates:1; rSTs:1)
          • Pyrinomonas methylaliphatogenes (isolates:1; rSTs:1)
  • Holophagae (isolates:23; rSTs:19 tree)
    • Acanthopleuribacterales (isolates:2)
      • Acanthopleuribacteraceae (isolates:2)
        • Acanthopleuribacter (isolates:1)
          • Acanthopleuribacter pedis (isolates:1)
        • Sulfidibacter (isolates:1)
          • Sulfidibacter corallicola (isolates:1)
    • Holophagales (isolates:20; rSTs:19 tree)
      • Holophagaceae (isolates:20; rSTs:19 tree)
        • Geothrix (isolates:17; rSTs:16 tree)
          • Candidatus Geothrix odensensis (isolates:1; rSTs:1)
          • Candidatus Geothrix skivensis (isolates:1)
          • Geothrix alkalitolerans (isolates:1; rSTs:1)
          • Geothrix campi (isolates:1; rSTs:1)
          • Geothrix edaphica (isolates:1; rSTs:1)
          • Geothrix fermentans (isolates:1; rSTs:1)
          • Geothrix fuzhouensis (isolates:1; rSTs:1)
          • Geothrix limicola (isolates:1; rSTs:1)
          • Geothrix mesophila (isolates:1; rSTs:1)
          • Geothrix oryzae (isolates:1; rSTs:1)
          • Geothrix oryzisoli (isolates:1; rSTs:1)
          • Geothrix paludis (isolates:1; rSTs:1)
          • Geothrix rubra (isolates:1; rSTs:1)
          • Geothrix sp. (isolates:3; rSTs:3 tree)
          • Geothrix terrae (isolates:1; rSTs:1)
        • Holophaga (isolates:1; rSTs:1)
          • Holophaga foetida (isolates:1; rSTs:1)
        • Mesoterricola (isolates:2; rSTs:2)
          • Mesoterricola sediminis (isolates:1; rSTs:1)
          • Mesoterricola silvestris (isolates:1; rSTs:1)
    • Thermotomaculales (isolates:1)
      • Thermotomaculaceae (isolates:1)
        • Thermotomaculum (isolates:1)
          • Thermotomaculum hydrothermale (isolates:1)
  • Terriglobia (isolates:82; rSTs:69 tree)
    • Bryobacterales (isolates:4; rSTs:3 tree)
      • Bryobacteraceae (isolates:2; rSTs:2)
        • Bryobacter (isolates:1; rSTs:1)
          • Bryobacter aggregatus (isolates:1; rSTs:1)
        • Paludibaculum (isolates:1; rSTs:1)
          • Paludibaculum fermentans (isolates:1; rSTs:1)
      • Solibacteraceae (isolates:2; rSTs:1)
        • Candidatus Solibacter (isolates:1; rSTs:1)
          • Candidatus Solibacter usitatus (isolates:1; rSTs:1)
        • Candidatus Sulfopaludibacter (isolates:1)
          • Candidatus Sulfopaludibacter sp. (isolates:1)
    • Candidatus Acidiferrales (isolates:1; rSTs:1)
    • Terriglobales (isolates:76; rSTs:65 tree)
      • Acidobacteriaceae (isolates:73; rSTs:64 tree)
        • Acidicapsa (isolates:3; rSTs:3 tree)
          • Acidicapsa acidisoli (isolates:1; rSTs:1)
          • Acidicapsa dinghuensis (isolates:1; rSTs:1)
          • Acidicapsa ligni (isolates:1; rSTs:1)
        • Acidipila (isolates:1; rSTs:1)
          • Acidipila rosea (isolates:1; rSTs:1)
        • Acidisarcina (isolates:1; rSTs:1)
          • Acidisarcina polymorpha (isolates:1; rSTs:1)
        • Acidobacterium (isolates:1; rSTs:1)
          • Acidobacterium capsulatum (isolates:1; rSTs:1)
        • Alloacidobacterium (isolates:1; rSTs:1)
          • Alloacidobacterium dinghuense (isolates:1; rSTs:1)
        • Bryocella (isolates:1; rSTs:1)
          • Bryocella elongata (isolates:1; rSTs:1)
        • Candidatus Sulfotelmatomonas (isolates:1)
          • Candidatus Sulfotelmatomonas gaucii (isolates:1)
        • Chloracidobacterium (isolates:10; rSTs:6)
          • Chloracidobacterium aggregatum (isolates:6; rSTs:4)
          • Chloracidobacterium sp. (isolates:1; rSTs:1)
          • Chloracidobacterium thermophilum (isolates:2; rSTs:1)
          • Chloracidobacterium validum (isolates:1)
        • Edaphobacter (isolates:15; rSTs:14 tree)
          • Edaphobacter acidisoli (isolates:2; rSTs:1)
          • Edaphobacter aggregans (isolates:1; rSTs:1)
          • Edaphobacter bradus (isolates:1; rSTs:1)
          • Edaphobacter dinghuensis (isolates:3; rSTs:2)
          • Edaphobacter flagellatus (isolates:1; rSTs:1)
          • Edaphobacter lichenicola (isolates:1; rSTs:1 tree)
          • Edaphobacter modestus (isolates:1; rSTs:1)
          • Edaphobacter sp. (isolates:5; rSTs:6 tree)
        • Granulicella (isolates:15; rSTs:15 tree)
          • Granulicella aggregans (isolates:2; rSTs:2)
          • Granulicella arctica (isolates:2; rSTs:2)
          • Granulicella cerasi (isolates:1; rSTs:1)
          • Granulicella mallensis (isolates:2; rSTs:2)
          • Granulicella paludicola (isolates:1; rSTs:1)
          • Granulicella pectinivorans (isolates:1; rSTs:1)
          • Granulicella rosea (isolates:1; rSTs:1)
          • Granulicella sibirica (isolates:1; rSTs:1)
          • Granulicella sp. (isolates:3; rSTs:3 tree)
          • Granulicella tundricola (isolates:1; rSTs:1)
        • Occallatibacter (isolates:2; rSTs:2)
          • Occallatibacter riparius (isolates:1; rSTs:1)
          • Occallatibacter savannae (isolates:1; rSTs:1)
        • Paracidobacterium (isolates:1; rSTs:1)
          • Paracidobacterium acidisoli (isolates:1; rSTs:1)
        • Pseudacidobacterium (isolates:1; rSTs:1)
          • Pseudacidobacterium ailaaui (isolates:1; rSTs:1)
        • Silvibacterium (isolates:4; rSTs:2)
          • Silvibacterium bohemicum (isolates:2; rSTs:1)
          • Silvibacterium dinghuense (isolates:2; rSTs:1)
        • Telmatobacter (isolates:1; rSTs:1)
          • Telmatobacter sp. (isolates:1; rSTs:1)
        • Terracidiphilus (isolates:1; rSTs:1)
          • Terracidiphilus gabretensis (isolates:1; rSTs:1)
        • Terriglobus (isolates:11; rSTs:10 tree)
          • Terriglobus albidus (isolates:2; rSTs:2)
          • Terriglobus aquaticus (isolates:2; rSTs:1)
          • Terriglobus roseus (isolates:3; rSTs:3 tree)
          • Terriglobus saanensis (isolates:1; rSTs:1)
          • Terriglobus sp. (isolates:2; rSTs:2)
          • Terriglobus tenax (isolates:1; rSTs:1)
        • Tunturibacter (isolates:3; rSTs:3 tree)
          • Tunturibacter empetritectus (isolates:1; rSTs:1)
          • Tunturibacter gelidoferens (isolates:1; rSTs:1)
          • Tunturibacter psychrotolerans (isolates:1; rSTs:1)
      • Candidatus Korobacteraceae (isolates:3; rSTs:1)
        • Candidatus Korobacter (isolates:1; rSTs:1)
          • Candidatus Korobacter versatilis (isolates:1; rSTs:1)
        • Candidatus Sulfotelmatobacter (isolates:2)
          • Candidatus Sulfotelmatobacter kueseliae (isolates:1)
          • Candidatus Sulfotelmatobacter sp. (isolates:1)
  • Thermoanaerobaculia (isolates:1; rSTs:1)
    • Thermoanaerobaculales (isolates:1; rSTs:1)
      • Thermoanaerobaculaceae (isolates:1; rSTs:1)
        • Thermoanaerobaculum (isolates:1; rSTs:1)
          • Thermoanaerobaculum aquaticum (isolates:1; rSTs:1)
  • Vicinamibacteria (isolates:2; rSTs:2)
    • Vicinamibacterales (isolates:2; rSTs:2)
      • Vicinamibacteraceae (isolates:2; rSTs:2)
        • Luteitalea (isolates:2; rSTs:2)
          • Luteitalea pratensis (isolates:1; rSTs:1)
          • Luteitalea sp. (isolates:1; rSTs:1)
• Actinomycetota (isolates:40315; rSTs:19648)
  • Acidimicrobiia (isolates:21; rSTs:19 tree)
    • Acidimicrobiales (isolates:21; rSTs:19 tree)
      • Acidimicrobiaceae (isolates:8; rSTs:7 tree)
        • Acidiferrimicrobium (isolates:1; rSTs:1)
          • Acidiferrimicrobium sp. (isolates:1; rSTs:1)
        • Acidimicrobium (isolates:2; rSTs:1)
          • Acidimicrobium ferrooxidans (isolates:2; rSTs:1)
        • Aciditerrimonas (isolates:1; rSTs:1)
          • Aciditerrimonas ferrireducens (isolates:1; rSTs:1)
        • Acidithrix (isolates:2; rSTs:2)
          • Acidithrix ferrooxidans (isolates:1; rSTs:1)
          • Acidithrix sp. (isolates:1; rSTs:1)
        • Ferrimicrobium (isolates:1; rSTs:1)
          • Ferrimicrobium acidiphilum (isolates:1; rSTs:1)
        • Ferrithrix (isolates:1; rSTs:1)
          • Ferrithrix thermotolerans (isolates:1; rSTs:1)
      • Iamiaceae (isolates:7; rSTs:6 tree)
        • Actinomarinicola (isolates:1; rSTs:1)
          • Actinomarinicola tropica (isolates:1; rSTs:1)
        • Aquihabitans (isolates:1; rSTs:1)
          • Aquihabitans sp. (isolates:1; rSTs:1)
        • Dermatobacter (isolates:1)
          • Dermatobacter hominis (isolates:1)
        • Iamia (isolates:2; rSTs:2)
          • Iamia majanohamensis (isolates:1; rSTs:1)
          • Iamia sp. (isolates:1; rSTs:1)
        • Rhabdothermincola (isolates:2; rSTs:2)
          • Rhabdothermincola salaria (isolates:1; rSTs:1)
          • Rhabdothermincola sediminis (isolates:1; rSTs:1)
      • Ilumatobacteraceae (isolates:4; rSTs:4 tree)
        • Desertimonas (isolates:1; rSTs:1)
          • Desertimonas flava (isolates:1; rSTs:1)
        • Ilumatobacter (isolates:3; rSTs:3 tree)
          • Ilumatobacter coccineus (isolates:1; rSTs:1)
          • Ilumatobacter fluminis (isolates:1; rSTs:1)
          • Ilumatobacter nonamiensis (isolates:1; rSTs:1)
      • Microthrixaceae (isolates:2; rSTs:2)
        • Candidatus Microthrix (isolates:2; rSTs:2)
          • Candidatus Microthrix parvicella (isolates:2; rSTs:2)
  • Actinomycetes (isolates:39541; rSTs:19120)
    • Acidothermales (isolates:2; rSTs:1)
      • Acidothermaceae (isolates:2; rSTs:1)
        • Acidothermus (isolates:2; rSTs:1)
          • Acidothermus cellulolyticus (isolates:2; rSTs:1)
    • Actinomycetales (isolates:544; rSTs:439 tree)
      • Actinomycetaceae (isolates:544; rSTs:439 tree)
        • Actinobaculum (isolates:10; rSTs:6 tree)
          • Actinobaculum massiliense (isolates:4; rSTs:1)
          • Actinobaculum suis (isolates:6; rSTs:5 tree)
        • Actinomyces (isolates:165; rSTs:135 tree)
          • Actinomyces acetigenes (isolates:1)
          • Actinomyces bouchesdurhonensis (isolates:1; rSTs:1)
          • Actinomyces bowdenii (isolates:2; rSTs:2 tree)
          • Actinomyces capricornis (isolates:1; rSTs:1)
          • Actinomyces culturomici (isolates:1; rSTs:1)
          • Actinomyces dentalis (isolates:1; rSTs:1)
          • Actinomyces denticolens (isolates:4; rSTs:2)
          • Actinomyces faecalis (isolates:2; rSTs:2)
          • Actinomyces gaoshouyii (isolates:3; rSTs:2)
          • Actinomyces gerencseriae (isolates:1; rSTs:1)
          • Actinomyces glycerinitolerans (isolates:1; rSTs:1)
          • Actinomyces graevenitzii (isolates:3; rSTs:3 tree)
          • Actinomyces haliotis (isolates:1; rSTs:1)
          • Actinomyces howellii (isolates:2; rSTs:1)
          • Actinomyces ihuae (isolates:1; rSTs:1)
          • Actinomyces israelii (isolates:1; rSTs:1)
          • Actinomyces johnsonii (isolates:5; rSTs:2)
          • Actinomyces lilanjuaniae (isolates:1; rSTs:1)
          • Actinomyces marmotae (isolates:3; rSTs:1)
          • Actinomyces marseillensis (isolates:1; rSTs:1)
          • Actinomyces massiliensis (isolates:3; rSTs:2)
          • Actinomyces mediterranea (isolates:1; rSTs:1)
          • Actinomyces minihominis (isolates:1; rSTs:1)
          • Actinomyces naeslundii (isolates:27; rSTs:20 tree)
          • Actinomyces oricola (isolates:1; rSTs:1)
          • Actinomyces oris (isolates:21; rSTs:16 tree)
          • Actinomyces polynesiensis (isolates:2)
          • Actinomyces procaprae (isolates:2; rSTs:2)
          • Actinomyces provencensis (isolates:1; rSTs:1)
          • Actinomyces qiguomingii (isolates:2; rSTs:1)
          • Actinomyces radicidentis (isolates:1; rSTs:1)
          • Actinomyces respiraculi (isolates:2; rSTs:2)
          • Actinomyces ruminicola (isolates:2; rSTs:2)
          • Actinomyces slackii (isolates:2; rSTs:1)
          • Actinomyces sp. (isolates:39; rSTs:40 tree)
          • Actinomyces stomatis (isolates:1; rSTs:1)
          • Actinomyces succiniciruminis (isolates:1; rSTs:1)
          • Actinomyces timonensis (isolates:1; rSTs:1)
          • Actinomyces trachealis (isolates:2; rSTs:2)
          • Actinomyces urinae (isolates:1; rSTs:1)
          • Actinomyces urogenitalis (isolates:9; rSTs:7 tree)
          • Actinomyces viscosus (isolates:3; rSTs:1)
          • Actinomyces vulturis (isolates:1; rSTs:1)
          • Actinomyces weissii (isolates:1; rSTs:1)
          • Actinomyces wuliandei (isolates:2; rSTs:2)
        • Actinotignum (isolates:49; rSTs:35 tree)
          • Actinotignum sanguinis (isolates:17; rSTs:9 tree)
          • Actinotignum schaalii (isolates:4; rSTs:2)
          • Actinotignum sp. (isolates:1; rSTs:3 tree)
          • Actinotignum timonense (isolates:21; rSTs:14 tree)
          • Actinotignum urinale (isolates:6; rSTs:7 tree)
        • Ancrocorticia (isolates:1; rSTs:1)
          • Ancrocorticia populi (isolates:1; rSTs:1)
        • Arcanobacterium (isolates:57; rSTs:39 tree)
          • Arcanobacterium bovis (isolates:1; rSTs:1)
          • Arcanobacterium buesumense (isolates:1; rSTs:1)
          • Arcanobacterium haemolyticum (isolates:5; rSTs:3 tree)
          • Arcanobacterium hippocoleae (isolates:3; rSTs:1)
          • Arcanobacterium ihumii (isolates:1; rSTs:1)
          • Arcanobacterium phocae (isolates:42; rSTs:28 tree)
          • Arcanobacterium phocisimile (isolates:1; rSTs:1)
          • Arcanobacterium pinnipediorum (isolates:1; rSTs:1)
          • Arcanobacterium pluranimalium (isolates:1; rSTs:1)
          • Arcanobacterium urinimassiliense (isolates:1; rSTs:1)
        • Boudabousia (isolates:4; rSTs:4 tree)
          • Boudabousia liubingyangii (isolates:2; rSTs:2)
          • Boudabousia marimammalium (isolates:1; rSTs:1)
          • Boudabousia tangfeifanii (isolates:1; rSTs:1)
        • Bowdeniella (isolates:2; rSTs:2 tree)
          • Bowdeniella massiliensis (isolates:1; rSTs:1)
          • Bowdeniella nasicola (isolates:1; rSTs:1)
        • Buchananella (isolates:3; rSTs:3 tree)
          • Buchananella hordeovulneris (isolates:3; rSTs:3 tree)
        • Changpingibacter (isolates:2; rSTs:2)
          • Changpingibacter yushuensis (isolates:2; rSTs:2)
        • Flaviflexus (isolates:8; rSTs:6 tree)
          • Flaviflexus ciconiae (isolates:1; rSTs:1)
          • Flaviflexus equikiangi (isolates:3; rSTs:2)
          • Flaviflexus huanghaiensis (isolates:1; rSTs:1)
          • Flaviflexus massiliensis (isolates:2; rSTs:1)
          • Flaviflexus salsibiostraticola (isolates:1; rSTs:1)
        • Gleimia (isolates:5; rSTs:5 tree)
          • Gleimia coleocanis (isolates:1; rSTs:1)
          • Gleimia europaea (isolates:1; rSTs:1)
          • Gleimia hominis (isolates:2; rSTs:2)
          • Gleimia sp. (isolates:1; rSTs:1)
        • Mobiluncus (isolates:53; rSTs:42 tree)
          • Mobiluncus curtisii (isolates:19; rSTs:12 tree)
          • Mobiluncus holmesii (isolates:2; rSTs:1)
          • Mobiluncus massiliensis (isolates:1; rSTs:1)
          • Mobiluncus mulieris (isolates:30; rSTs:27 tree)
          • Mobiluncus porci (isolates:1; rSTs:1)
        • Nanchangia (isolates:2; rSTs:1)
          • Nanchangia anserum (isolates:2; rSTs:1)
        • Neoactinobaculum (isolates:1; rSTs:1)
          • Neoactinobaculum massilliense (isolates:1; rSTs:1)
        • Peptidiphaga (isolates:1; rSTs:1)
          • Peptidiphaga gingivicola (isolates:1; rSTs:1)
        • Schaalia (isolates:33; rSTs:30 tree)
          • Schaalia canis (isolates:1; rSTs:1)
          • Schaalia cardiffensis (isolates:3; rSTs:2)
          • Schaalia dentiphila (isolates:3; rSTs:2)
          • Schaalia georgiae (isolates:3; rSTs:3 tree)
          • Schaalia hyovaginalis (isolates:3; rSTs:3 tree)
          • Schaalia meyeri (isolates:3; rSTs:2)
          • Schaalia odontolytica (isolates:6; rSTs:2 tree)
          • Schaalia radingae (isolates:1; rSTs:1)
          • Schaalia sp. (isolates:2; rSTs:7 tree)
          • Schaalia suimastitidis (isolates:1; rSTs:1)
          • Schaalia turicensis (isolates:6; rSTs:5 tree)
          • Schaalia vaccimaxillae (isolates:1; rSTs:1)
        • Scrofimicrobium (isolates:1; rSTs:1)
          • Scrofimicrobium canadense (isolates:1; rSTs:1)
        • Trueperella (isolates:117; rSTs:100 tree)
          • Trueperella abortisuis (isolates:2; rSTs:2)
          • Trueperella bernardiae (isolates:7; rSTs:6 tree)
          • Trueperella bialowiezensis (isolates:1; rSTs:1)
          • Trueperella bonasi (isolates:1; rSTs:1)
          • Trueperella pecoris (isolates:4; rSTs:4 tree)
          • Trueperella pyogenes (isolates:100; rSTs:84 tree)
          • Trueperella sp. (isolates:2; rSTs:2)
        • Varibaculum (isolates:11; rSTs:8 tree)
          • Varibaculum cambriense (isolates:5; rSTs:4 tree)
          • Varibaculum massiliense (isolates:1; rSTs:1)
          • Varibaculum prostatecancerukia (isolates:2; rSTs:1)
          • Varibaculum timonense (isolates:2; rSTs:1)
          • Varibaculum vaginae (isolates:1; rSTs:1)
        • Winkia (isolates:19; rSTs:17 tree)
          • Winkia neuii (isolates:7; rSTs:8 tree)
          • Winkia sp. (isolates:12; rSTs:9 tree)
    • Actinopolysporales (isolates:16; rSTs:14 tree)
      • Actinopolysporaceae (isolates:16; rSTs:14 tree)
        • Actinopolyspora (isolates:15; rSTs:13 tree)
          • Actinopolyspora alba (isolates:1; rSTs:1)
          • Actinopolyspora biskrensis (isolates:1; rSTs:1)
          • Actinopolyspora erythraea (isolates:2; rSTs:1)
          • Actinopolyspora halophila (isolates:1; rSTs:1)
          • Actinopolyspora mortivallis (isolates:2; rSTs:2)
          • Actinopolyspora mzabensis (isolates:1; rSTs:1)
          • Actinopolyspora righensis (isolates:2; rSTs:2)
          • Actinopolyspora saharensis (isolates:1; rSTs:1)
          • Actinopolyspora sp. (isolates:3; rSTs:2 tree)
          • Actinopolyspora xinjiangensis (isolates:1; rSTs:1)
        • Haloactinomyces (isolates:1; rSTs:1)
          • Haloactinomyces albus (isolates:1; rSTs:1)
    • Bifidobacteriales (isolates:3912; rSTs:1709)
      • Bifidobacteriaceae (isolates:3911; rSTs:1709)
        • Aeriscardovia (isolates:2; rSTs:1)
          • Aeriscardovia aeriphila (isolates:2; rSTs:1)
        • Alloscardovia (isolates:25; rSTs:24 tree)
          • Alloscardovia macacae (isolates:3; rSTs:3 tree)
          • Alloscardovia omnicolens (isolates:20; rSTs:19 tree)
          • Alloscardovia sp. (isolates:1; rSTs:1)
          • Alloscardovia theropitheci (isolates:1; rSTs:1)
        • Bifidobacterium (isolates:3766; rSTs:1583)
          • Bifidobacterium actinocoloniiforme (isolates:3; rSTs:1)
          • Bifidobacterium adolescentis (isolates:606; rSTs:205 tree)
          • Bifidobacterium aemilianum (isolates:1; rSTs:1)
          • Bifidobacterium aerophilum (isolates:1; rSTs:1)
          • Bifidobacterium aesculapii (isolates:1; rSTs:1)
          • Bifidobacterium amazonense (isolates:1; rSTs:1)
          • Bifidobacterium angulatum (isolates:13; rSTs:5 tree)
          • Bifidobacterium animalis (isolates:205; rSTs:24 tree)
          • Bifidobacterium anseris (isolates:1; rSTs:1)
          • Bifidobacterium apis (isolates:1; rSTs:1)
          • Bifidobacterium apousia (isolates:3; rSTs:3 tree)
          • Bifidobacterium apri (isolates:1; rSTs:1)
          • Bifidobacterium aquikefiri (isolates:1; rSTs:1)
          • Bifidobacterium asteroides (isolates:7; rSTs:6 tree)
          • Bifidobacterium avesanii (isolates:2; rSTs:1)
          • Bifidobacterium biavatii (isolates:2; rSTs:2)
          • Bifidobacterium bifidum (isolates:274; rSTs:94 tree)
          • Bifidobacterium bohemicum (isolates:3; rSTs:1)
          • Bifidobacterium bombi (isolates:2; rSTs:1)
          • Bifidobacterium boum (isolates:5; rSTs:3 tree)
          • Bifidobacterium breve (isolates:250; rSTs:124 tree)
          • Bifidobacterium callimiconis (isolates:2; rSTs:2)
          • Bifidobacterium callitrichidarum (isolates:1; rSTs:1)
          • Bifidobacterium callitrichos (isolates:4; rSTs:4 tree)
          • Bifidobacterium canis (isolates:1; rSTs:1)
          • Bifidobacterium castoris (isolates:1; rSTs:1)
          • Bifidobacterium catenulatum (isolates:45; rSTs:28 tree)
          • Bifidobacterium catulorum (isolates:1; rSTs:1)
          • Bifidobacterium cebidarum (isolates:1; rSTs:1)
          • Bifidobacterium choerinum (isolates:4; rSTs:2)
          • Bifidobacterium choladohabitans (isolates:4; rSTs:4 tree)
          • Bifidobacterium choloepi (isolates:1; rSTs:1)
          • Bifidobacterium colobi (isolates:1; rSTs:1)
          • Bifidobacterium commune (isolates:2; rSTs:1)
          • Bifidobacterium coryneforme (isolates:9; rSTs:2)
          • Bifidobacterium criceti (isolates:1; rSTs:1)
          • Bifidobacterium crudilactis (isolates:1; rSTs:1)
          • Bifidobacterium cuniculi (isolates:2; rSTs:1)
          • Bifidobacterium dentium (isolates:55; rSTs:38 tree)
          • Bifidobacterium dolichotidis (isolates:1; rSTs:1)
          • Bifidobacterium erythrocebi (isolates:1; rSTs:1)
          • Bifidobacterium eulemuris (isolates:2; rSTs:1)
          • Bifidobacterium felsineum (isolates:2; rSTs:2)
          • Bifidobacterium gallicum (isolates:4; rSTs:1)
          • Bifidobacterium goeldii (isolates:1; rSTs:1)
          • Bifidobacterium hapali (isolates:1; rSTs:1)
          • Bifidobacterium hominis (isolates:1; rSTs:1)
          • Bifidobacterium imperatoris (isolates:2; rSTs:1)
          • Bifidobacterium indicum (isolates:6; rSTs:1)
          • Bifidobacterium italicum (isolates:1; rSTs:1)
          • Bifidobacterium jacchi (isolates:1; rSTs:1)
          • Bifidobacterium lemurum (isolates:3; rSTs:1)
          • Bifidobacterium leontopitheci (isolates:1; rSTs:1)
          • Bifidobacterium longum (isolates:1457; rSTs:587 tree)
          • Bifidobacterium magnum (isolates:3; rSTs:2)
          • Bifidobacterium margollesii (isolates:1; rSTs:1)
          • Bifidobacterium mellis (isolates:1; rSTs:1)
          • Bifidobacterium merycicum (isolates:4; rSTs:3 tree)
          • Bifidobacterium miconis (isolates:1; rSTs:1)
          • Bifidobacterium miconisargentati (isolates:1; rSTs:1)
          • Bifidobacterium minimum (isolates:3; rSTs:1)
          • Bifidobacterium mizhiense (isolates:1; rSTs:1)
          • Bifidobacterium mongoliense (isolates:13; rSTs:11 tree)
          • Bifidobacterium moraviense (isolates:1; rSTs:1)
          • Bifidobacterium moukalabense (isolates:13; rSTs:6 tree)
          • Bifidobacterium myosotis (isolates:2; rSTs:2)
          • Bifidobacterium oedipodis (isolates:1; rSTs:1)
          • Bifidobacterium olomucense (isolates:1; rSTs:1)
          • Bifidobacterium panos (isolates:1)
          • Bifidobacterium parmae (isolates:1; rSTs:1)
          • Bifidobacterium phasiani (isolates:1; rSTs:1)
          • Bifidobacterium platyrrhinorum (isolates:1; rSTs:1)
          • Bifidobacterium pluvialisilvae (isolates:1; rSTs:1)
          • Bifidobacterium polysaccharolyticum (isolates:5; rSTs:5 tree)
          • Bifidobacterium pongonis (isolates:1; rSTs:1)
          • Bifidobacterium porcinum (isolates:1; rSTs:1)
          • Bifidobacterium primatium (isolates:1; rSTs:1)
          • Bifidobacterium pseudocatenulatum (isolates:458; rSTs:181 tree)
          • Bifidobacterium pseudolongum (isolates:97; rSTs:72 tree)
          • Bifidobacterium psychraerophilum (isolates:4; rSTs:2)
          • Bifidobacterium pullorum (isolates:15; rSTs:11 tree)
          • Bifidobacterium ramosum (isolates:2; rSTs:1)
          • Bifidobacterium reuteri (isolates:3; rSTs:2)
          • Bifidobacterium rousetti (isolates:1; rSTs:1)
          • Bifidobacterium ruminantium (isolates:5; rSTs:3 tree)
          • Bifidobacterium saguini (isolates:3; rSTs:1)
          • Bifidobacterium saguinibicoloris (isolates:1; rSTs:1)
          • Bifidobacterium saimiriisciurei (isolates:1; rSTs:1)
          • Bifidobacterium samirii (isolates:1; rSTs:1)
          • Bifidobacterium santillanense (isolates:1; rSTs:1)
          • Bifidobacterium scaligerum (isolates:1; rSTs:1)
          • Bifidobacterium scardovii (isolates:6; rSTs:3 tree)
          • Bifidobacterium simiarum (isolates:2; rSTs:2)
          • Bifidobacterium simiiventris (isolates:1; rSTs:1)
          • Bifidobacterium sp. (isolates:73; rSTs:65 tree)
          • Bifidobacterium stellenboschense (isolates:1; rSTs:1)
          • Bifidobacterium subtile (isolates:4; rSTs:1)
          • Bifidobacterium thermacidophilum (isolates:3; rSTs:1)
          • Bifidobacterium thermophilum (isolates:7; rSTs:5 tree)
          • Bifidobacterium tibiigranuli (isolates:2; rSTs:1)
          • Bifidobacterium tissieri (isolates:3; rSTs:2)
          • Bifidobacterium tsurumiense (isolates:4; rSTs:2)
          • Bifidobacterium vansinderenii (isolates:1; rSTs:1)
          • Bifidobacterium vespertilionis (isolates:3; rSTs:2)
          • Bifidobacterium xylocopae (isolates:1; rSTs:1)
        • Bombiscardovia (isolates:2; rSTs:2)
          • Bombiscardovia apis (isolates:1; rSTs:1)
          • Bombiscardovia coagulans (isolates:1; rSTs:1)
        • Galliscardovia (isolates:1; rSTs:1)
          • Galliscardovia ingluviei (isolates:1; rSTs:1)
        • Gardnerella (isolates:102; rSTs:92 tree)
          • Gardnerella greenwoodii (isolates:4; rSTs:3 tree)
          • Gardnerella leopoldii (isolates:5; rSTs:5 tree)
          • Gardnerella pickettii (isolates:8; rSTs:6 tree)
          • Gardnerella piotii (isolates:4; rSTs:2)
          • Gardnerella sp. (isolates:5; rSTs:23 tree)
          • Gardnerella swidsinskii (isolates:9; rSTs:7 tree)
          • Gardnerella vaginalis (isolates:67; rSTs:46 tree)
        • Parascardovia (isolates:4; rSTs:2)
          • Parascardovia denticolens (isolates:4; rSTs:2)
        • Pseudoscardovia (isolates:3; rSTs:2)
          • Pseudoscardovia radai (isolates:1; rSTs:1)
          • Pseudoscardovia suis (isolates:2; rSTs:1)
        • Scardovia (isolates:6; rSTs:2)
          • Scardovia inopinata (isolates:3; rSTs:1)
          • Scardovia wiggsiae (isolates:3; rSTs:1)
    • Candidatus Nanopelagicales (isolates:16; rSTs:16 tree)
      • Candidatus Nanopelagicaceae (isolates:16; rSTs:16 tree)
        • Candidatus Nanopelagicus (isolates:3; rSTs:3 tree)
          • Candidatus Nanopelagicus abundans (isolates:1; rSTs:1)
          • Candidatus Nanopelagicus hibericus (isolates:1; rSTs:1)
          • Candidatus Nanopelagicus limnes (isolates:1; rSTs:1)
        • Candidatus Planktophila (isolates:13; rSTs:13 tree)
          • Candidatus Planktophila dulcis (isolates:3; rSTs:3 tree)
          • Candidatus Planktophila lacus (isolates:3; rSTs:3 tree)
          • Candidatus Planktophila limnetica (isolates:1; rSTs:1)
          • Candidatus Planktophila sulfonica (isolates:1; rSTs:1)
          • Candidatus Planktophila vernalis (isolates:1; rSTs:1)
          • Candidatus Planktophila versatilis (isolates:4; rSTs:4 tree)
    • Catenulisporales (isolates:12; rSTs:11 tree)
      • Actinospicaceae (isolates:4; rSTs:4 tree)
        • Actinocrinis (isolates:1; rSTs:1)
          • Actinocrinis puniceicyclus (isolates:1; rSTs:1)
        • Actinospica (isolates:3; rSTs:3 tree)
          • Actinospica acidithermotolerans (isolates:1; rSTs:1)
          • Actinospica durhamensis (isolates:1; rSTs:1)
          • Actinospica robiniae (isolates:1; rSTs:1)
      • Catenulisporaceae (isolates:8; rSTs:7 tree)
        • Catenulispora (isolates:8; rSTs:7 tree)
          • Catenulispora acidiphila (isolates:1; rSTs:1)
          • Catenulispora pinisilvae (isolates:2; rSTs:2)
          • Catenulispora pinistramenti (isolates:2; rSTs:2)
          • Catenulispora rubra (isolates:1; rSTs:1)
          • Catenulispora subtropica (isolates:1; rSTs:1)
          • Catenulispora yoronensis (isolates:1)
    • Cryptosporangiales (isolates:5; rSTs:5 tree)
      • Cryptosporangiaceae (isolates:5; rSTs:5 tree)
        • Cryptosporangium (isolates:5; rSTs:5 tree)
          • Cryptosporangium arvum (isolates:1; rSTs:1)
          • Cryptosporangium aurantiacum (isolates:1; rSTs:1)
          • Cryptosporangium japonicum (isolates:1; rSTs:1)
          • Cryptosporangium minutisporangium (isolates:1; rSTs:1)
          • Cryptosporangium phraense (isolates:1; rSTs:1)
    • Frankiales (isolates:83; rSTs:40 tree)
      • Frankiaceae (isolates:83; rSTs:40 tree)
        • Frankia (isolates:56; rSTs:25 tree)
          • Candidatus Frankia alpina (isolates:2; rSTs:2)
          • Candidatus Frankia meridionalis (isolates:2)
          • Candidatus Frankia nodulisporulans (isolates:3; rSTs:1)
          • Frankia alni (isolates:1; rSTs:1)
          • Frankia canadensis (isolates:2; rSTs:1)
          • Frankia casuarinae (isolates:4; rSTs:1)
          • Frankia gtarii (isolates:2; rSTs:2)
          • Frankia nepalensis (isolates:4; rSTs:1)
          • Frankia sp. (isolates:33; rSTs:13 tree)
          • Frankia tisae (isolates:1; rSTs:1)
          • Frankia torreyi (isolates:1; rSTs:1)
          • Frankia umida (isolates:1; rSTs:1)
        • Parafrankia (isolates:10; rSTs:7 tree)
          • Parafrankia colletiae (isolates:1)
          • Parafrankia discariae (isolates:1; rSTs:1)
          • Parafrankia elaeagni (isolates:1; rSTs:1)
          • Parafrankia irregularis (isolates:1; rSTs:1)
          • Parafrankia soli (isolates:1)
          • Parafrankia sp. (isolates:5; rSTs:4 tree)
        • Protofrankia (isolates:10; rSTs:2)
          • Candidatus Protofrankia californiensis (isolates:3)
          • Candidatus Protofrankia datiscae (isolates:5; rSTs:1)
          • Protofrankia coriariae (isolates:1; rSTs:1)
          • Protofrankia sp. (isolates:1)
        • Pseudofrankia (isolates:7; rSTs:6 tree)
          • Pseudofrankia asymbiotica (isolates:1; rSTs:1)
          • Pseudofrankia inefficax (isolates:1; rSTs:1)
          • Pseudofrankia saprophytica (isolates:1; rSTs:1)
          • Pseudofrankia sp. (isolates:4; rSTs:3 tree)
    • Geodermatophilales (isolates:121; rSTs:105 tree)
      • Antricoccaceae (isolates:1; rSTs:1)
        • Antricoccus (isolates:1; rSTs:1)
          • Antricoccus suffuscus (isolates:1; rSTs:1)
      • Geodermatophilaceae (isolates:120; rSTs:104 tree)
        • Blastococcus (isolates:42; rSTs:39 tree)
          • Blastococcus aggregatus (isolates:1; rSTs:1)
          • Blastococcus atacamensis (isolates:1; rSTs:1)
          • Blastococcus aurantiacus (isolates:1; rSTs:1)
          • Blastococcus brunescens (isolates:1)
          • Blastococcus capsensis (isolates:1; rSTs:1)
          • Blastococcus carthaginiensis (isolates:1; rSTs:1)
          • Blastococcus colisei (isolates:1; rSTs:1)
          • Blastococcus fimeti (isolates:1; rSTs:1)
          • Blastococcus haudaquaticus (isolates:1; rSTs:1)
          • Blastococcus jejuensis (isolates:1; rSTs:1)
          • Blastococcus litoris (isolates:1; rSTs:1)
          • Blastococcus mobilis (isolates:1; rSTs:1)
          • Blastococcus saxobsidens (isolates:3; rSTs:1)
          • Blastococcus sp. (isolates:23; rSTs:24 tree)
          • Blastococcus tunisiensis (isolates:1; rSTs:1)
          • Blastococcus xanthinilyticus (isolates:1; rSTs:1)
          • Candidatus Blastococcus massiliensis (isolates:2; rSTs:1)
        • Cumulibacter (isolates:2; rSTs:2)
          • Cumulibacter manganitolerans (isolates:1; rSTs:1)
          • Cumulibacter soli (isolates:1; rSTs:1)
        • Geodermatophilus (isolates:29; rSTs:27 tree)
          • Geodermatophilus africanus (isolates:1; rSTs:1)
          • Geodermatophilus amargosae (isolates:1; rSTs:1)
          • Geodermatophilus aquaeductus (isolates:1; rSTs:1)
          • Geodermatophilus bullaregiensis (isolates:1; rSTs:1)
          • Geodermatophilus chilensis (isolates:1; rSTs:1)
          • Geodermatophilus dictyosporus (isolates:1; rSTs:1)
          • Geodermatophilus nigrescens (isolates:1; rSTs:1)
          • Geodermatophilus normandii (isolates:1; rSTs:1)
          • Geodermatophilus obscurus (isolates:3; rSTs:2)
          • Geodermatophilus poikilotrophus (isolates:1; rSTs:1)
          • Geodermatophilus pulveris (isolates:1; rSTs:1)
          • Geodermatophilus ruber (isolates:1; rSTs:1)
          • Geodermatophilus sabuli (isolates:2; rSTs:1)
          • Geodermatophilus saharensis (isolates:1; rSTs:1)
          • Geodermatophilus siccatus (isolates:1; rSTs:1)
          • Geodermatophilus sp. (isolates:9; rSTs:9 tree)
          • Geodermatophilus telluris (isolates:1; rSTs:1)
          • Geodermatophilus tzadiensis (isolates:1; rSTs:1)
        • Goekera (isolates:4; rSTs:2)
          • Goekera deserti (isolates:4; rSTs:2)
        • Klenkia (isolates:9; rSTs:8 tree)
          • Klenkia brasiliensis (isolates:1; rSTs:1)
          • Klenkia marina (isolates:1; rSTs:1)
          • Klenkia sesuvii (isolates:1; rSTs:1)
          • Klenkia soli (isolates:1; rSTs:1)
          • Klenkia sp. (isolates:1; rSTs:1)
          • Klenkia taihuensis (isolates:2; rSTs:1)
          • Klenkia terrae (isolates:2; rSTs:2)
        • Modestobacter (isolates:31; rSTs:23 tree)
          • Modestobacter altitudinis (isolates:1; rSTs:1)
          • Modestobacter caceresii (isolates:1; rSTs:1)
          • Modestobacter excelsi (isolates:1; rSTs:1)
          • Modestobacter italicus (isolates:1; rSTs:1)
          • Modestobacter marinus (isolates:4; rSTs:2)
          • Modestobacter multiseptatus (isolates:1; rSTs:1)
          • Modestobacter muralis (isolates:2; rSTs:1)
          • Modestobacter roseus (isolates:2; rSTs:1)
          • Modestobacter sp. (isolates:16; rSTs:13 tree)
          • Modestobacter versicolor (isolates:2; rSTs:1)
        • Petropleomorpha (isolates:1; rSTs:1)
          • Petropleomorpha daqingensis (isolates:1; rSTs:1)
        • Trujillonella (isolates:2; rSTs:2)
          • Trujillonella endophytica (isolates:2; rSTs:2)
    • Glycomycetales (isolates:41; rSTs:32 tree)
      • Glycomycetaceae (isolates:41; rSTs:32 tree)
        • Glycomyces (isolates:35; rSTs:27 tree)
          • Glycomyces albidus (isolates:1; rSTs:1)
          • Glycomyces algeriensis (isolates:4; rSTs:2)
          • Glycomyces amatae (isolates:1; rSTs:1)
          • Glycomyces arizonensis (isolates:1; rSTs:1)
          • Glycomyces artemisiae (isolates:1; rSTs:1)
          • Glycomyces buryatensis (isolates:1; rSTs:1)
          • Glycomyces dulcitolivorans (isolates:1; rSTs:1)
          • Glycomyces endophyticus (isolates:1; rSTs:1)
          • Glycomyces harbinensis (isolates:2; rSTs:1)
          • Glycomyces lechevalierae (isolates:3; rSTs:1)
          • Glycomyces luteolus (isolates:1; rSTs:1)
          • Glycomyces niveus (isolates:1; rSTs:1)
          • Glycomyces paridis (isolates:1; rSTs:1)
          • Glycomyces salinus (isolates:1; rSTs:1)
          • Glycomyces sambucus (isolates:1; rSTs:1)
          • Glycomyces sp. (isolates:9; rSTs:7 tree)
          • Glycomyces tenuis (isolates:2; rSTs:1)
          • Glycomyces terrestris (isolates:1; rSTs:1)
          • Glycomyces tritici (isolates:1; rSTs:1)
          • Glycomyces xiaoerkulensis (isolates:1; rSTs:1)
        • Haloglycomyces (isolates:1; rSTs:1)
          • Haloglycomyces albus (isolates:1; rSTs:1)
        • Natronoglycomyces (isolates:1; rSTs:1)
          • Natronoglycomyces albus (isolates:1; rSTs:1)
        • Stackebrandtia (isolates:4; rSTs:3 tree)
          • Stackebrandtia albiflava (isolates:2; rSTs:1)
          • Stackebrandtia endophytica (isolates:1; rSTs:1)
          • Stackebrandtia nassauensis (isolates:1; rSTs:1)
    • Jatrophihabitantales (isolates:5; rSTs:5 tree)
      • Jatrophihabitantaceae (isolates:5; rSTs:5 tree)
        • Jatrophihabitans (isolates:5; rSTs:5 tree)
          • Jatrophihabitans cynanchi (isolates:1; rSTs:1)
          • Jatrophihabitans endophyticus (isolates:1; rSTs:1)
          • Jatrophihabitans sp. (isolates:2; rSTs:2 tree)
          • Jatrophihabitans telluris (isolates:1; rSTs:1)
    • Jiangellales (isolates:22; rSTs:19 tree)
      • Jiangellaceae (isolates:22; rSTs:19 tree)
        • Haloactinopolyspora (isolates:2; rSTs:1)
          • Haloactinopolyspora alba (isolates:2; rSTs:1)
        • Jiangella (isolates:14; rSTs:13 tree)
          • Jiangella alba (isolates:2; rSTs:1)
          • Jiangella alkaliphila (isolates:2; rSTs:2)
          • Jiangella anatolica (isolates:1; rSTs:1)
          • Jiangella asiatica (isolates:1; rSTs:1)
          • Jiangella aurantiaca (isolates:1; rSTs:1)
          • Jiangella endophytica (isolates:1; rSTs:1)
          • Jiangella gansuensis (isolates:1; rSTs:1)
          • Jiangella mangrovi (isolates:1; rSTs:1)
          • Jiangella muralis (isolates:1; rSTs:1)
          • Jiangella rhizosphaerae (isolates:1; rSTs:1)
          • Jiangella sp. (isolates:1; rSTs:1)
          • Jiangella ureilytica (isolates:1; rSTs:1)
        • Phytoactinopolyspora (isolates:6; rSTs:5 tree)
          • Phytoactinopolyspora alkaliphila (isolates:1; rSTs:1)
          • Phytoactinopolyspora endophytica (isolates:1)
          • Phytoactinopolyspora halophila (isolates:1; rSTs:1)
          • Phytoactinopolyspora halotolerans (isolates:1; rSTs:1)
          • Phytoactinopolyspora limicola (isolates:1; rSTs:1)
          • Phytoactinopolyspora mesophila (isolates:1; rSTs:1)
    • Kineosporiales (isolates:43; rSTs:31 tree)
      • Kineosporiaceae (isolates:43; rSTs:31 tree)
        • Angustibacter (isolates:3; rSTs:2)
          • Angustibacter aerolatus (isolates:1)
          • Angustibacter luteus (isolates:1; rSTs:1)
          • Angustibacter sp. (isolates:1; rSTs:1)
        • Kineococcus (isolates:16; rSTs:15 tree)
          • Kineococcus aurantiacus (isolates:2; rSTs:1)
          • Kineococcus endophyticus (isolates:1; rSTs:1)
          • Kineococcus glutinatus (isolates:1; rSTs:1)
          • Kineococcus indalonis (isolates:1; rSTs:1)
          • Kineococcus radiotolerans (isolates:2; rSTs:2)
          • Kineococcus rhizosphaerae (isolates:1; rSTs:1)
          • Kineococcus rubinsiae (isolates:1; rSTs:1)
          • Kineococcus siccus (isolates:1; rSTs:1)
          • Kineococcus sp. (isolates:4; rSTs:4 tree)
          • Kineococcus vitellinus (isolates:1; rSTs:1)
          • Kineococcus xinjiangensis (isolates:1; rSTs:1)
        • Kineosporia (isolates:12; rSTs:7 tree)
          • Kineosporia aurantiaca (isolates:1)
          • Kineosporia babensis (isolates:1; rSTs:1)
          • Kineosporia corallincola (isolates:1; rSTs:1)
          • Kineosporia mesophila (isolates:2; rSTs:1)
          • Kineosporia rhamnosa (isolates:1)
          • Kineosporia rhizophila (isolates:2; rSTs:1)
          • Kineosporia sp. (isolates:2; rSTs:2)
          • Kineosporia succinea (isolates:2; rSTs:1)
        • Pseudokineococcus (isolates:7; rSTs:4 tree)
          • Pseudokineococcus basanitobsidens (isolates:1; rSTs:1)
          • Pseudokineococcus lusitanus (isolates:1; rSTs:1)
          • Pseudokineococcus marinus (isolates:3; rSTs:1)
          • Pseudokineococcus sp. (isolates:2; rSTs:1)
        • Quadrisphaera (isolates:5; rSTs:3 tree)
          • Quadrisphaera granulorum (isolates:2; rSTs:1)
          • Quadrisphaera setariae (isolates:1; rSTs:1)
          • Quadrisphaera sp. (isolates:2; rSTs:1)
    • Kitasatosporales (isolates:5386; rSTs:4394)
      • Carbonactinosporaceae (isolates:4; rSTs:3 tree)
        • Carbonactinospora (isolates:4; rSTs:3 tree)
          • Carbonactinospora thermoautotrophica (isolates:4; rSTs:3 tree)
      • Streptomycetaceae (isolates:5382; rSTs:4391)
        • Actinacidiphila (isolates:25; rSTs:21 tree)
          • Actinacidiphila acididurans (isolates:1; rSTs:1)
          • Actinacidiphila alni (isolates:3; rSTs:3 tree)
          • Actinacidiphila bryophytorum (isolates:4; rSTs:2)
          • Actinacidiphila cocklensis (isolates:2; rSTs:1)
          • Actinacidiphila epipremni (isolates:1; rSTs:1)
          • Actinacidiphila glaucinigra (isolates:5; rSTs:5 tree)
          • Actinacidiphila guanduensis (isolates:1; rSTs:1)
          • Actinacidiphila oryziradicis (isolates:1; rSTs:1)
          • Actinacidiphila paucisporea (isolates:1; rSTs:1)
          • Actinacidiphila rubida (isolates:2; rSTs:1)
          • Actinacidiphila soli (isolates:1; rSTs:1)
          • Actinacidiphila sp. (isolates:1; rSTs:1)
          • Actinacidiphila yanglinensis (isolates:1; rSTs:1)
          • Actinacidiphila yeochonensis (isolates:1; rSTs:1)
        • Allostreptomyces (isolates:1; rSTs:1)
          • Allostreptomyces psammosilenae (isolates:1; rSTs:1)
        • Embleya (isolates:4; rSTs:5 tree)
          • Embleya hyalina (isolates:1; rSTs:1)
          • Embleya scabrispora (isolates:1; rSTs:1)
          • Embleya sp. (isolates:2; rSTs:3 tree)
        • Kitasatospora (isolates:132; rSTs:107 tree)
          • Kitasatospora aburaviensis (isolates:1; rSTs:1)
          • Kitasatospora acidiphila (isolates:1; rSTs:1)
          • Kitasatospora albolonga (isolates:1; rSTs:1)
          • Kitasatospora arboriphila (isolates:1; rSTs:1)
          • Kitasatospora atroaurantiaca (isolates:2; rSTs:1)
          • Kitasatospora aureofaciens (isolates:11; rSTs:4 tree)
          • Kitasatospora azatica (isolates:1; rSTs:1)
          • Kitasatospora brasiliensis (isolates:1; rSTs:1)
          • Kitasatospora cathayae (isolates:1; rSTs:1)
          • Kitasatospora cheerisanensis (isolates:1; rSTs:1)
          • Kitasatospora cineracea (isolates:5; rSTs:4 tree)
          • Kitasatospora cystarginea (isolates:1; rSTs:1)
          • Kitasatospora fiedleri (isolates:1; rSTs:1)
          • Kitasatospora gansuensis (isolates:1; rSTs:1)
          • Kitasatospora griseola (isolates:3; rSTs:3 tree)
          • Kitasatospora herbaricolor (isolates:4; rSTs:2)
          • Kitasatospora humi (isolates:1; rSTs:1)
          • Kitasatospora indigofera (isolates:2; rSTs:2)
          • Kitasatospora kazusensis (isolates:1; rSTs:1)
          • Kitasatospora kifunensis (isolates:1; rSTs:1)
          • Kitasatospora mediocidica (isolates:1; rSTs:1)
          • Kitasatospora misakiensis (isolates:1)
          • Kitasatospora nipponensis (isolates:1; rSTs:1)
          • Kitasatospora paracochleata (isolates:2; rSTs:1)
          • Kitasatospora paranensis (isolates:1; rSTs:1)
          • Kitasatospora phosalacinea (isolates:2; rSTs:2)
          • Kitasatospora purpeofusca (isolates:9; rSTs:7 tree)
          • Kitasatospora putterlickiae (isolates:1)
          • Kitasatospora saccharophila (isolates:1; rSTs:1)
          • Kitasatospora setae (isolates:2; rSTs:1)
          • Kitasatospora sp. (isolates:66; rSTs:59 tree)
          • Kitasatospora terrestris (isolates:1; rSTs:1)
          • Kitasatospora viridis (isolates:2; rSTs:1)
          • Kitasatospora xanthocidica (isolates:1; rSTs:1)
        • Mangrovactinospora (isolates:1; rSTs:1)
          • Mangrovactinospora gilvigrisea (isolates:1; rSTs:1)
        • Peterkaempfera (isolates:2; rSTs:2)
          • Peterkaempfera bronchialis (isolates:1; rSTs:1)
          • Peterkaempfera griseoplana (isolates:1; rSTs:1)
        • Phaeacidiphilus (isolates:1; rSTs:1)
          • Phaeacidiphilus oryzae (isolates:1; rSTs:1)
        • Streptacidiphilus (isolates:15; rSTs:12 tree)
          • Streptacidiphilus albus (isolates:2; rSTs:1)
          • Streptacidiphilus anmyonensis (isolates:1; rSTs:1)
          • Streptacidiphilus carbonis (isolates:1; rSTs:1)
          • Streptacidiphilus fuscans (isolates:1; rSTs:1)
          • Streptacidiphilus jeojiense (isolates:1; rSTs:1)
          • Streptacidiphilus jiangxiensis (isolates:2; rSTs:1)
          • Streptacidiphilus melanogenes (isolates:1; rSTs:1)
          • Streptacidiphilus neutrinimicus (isolates:1; rSTs:1)
          • Streptacidiphilus pinicola (isolates:1; rSTs:1)
          • Streptacidiphilus rugosus (isolates:1; rSTs:1)
          • Streptacidiphilus sp. (isolates:3; rSTs:2 tree)
        • Streptantibioticus (isolates:9; rSTs:8 tree)
          • Streptantibioticus cattleyicolor (isolates:2; rSTs:2)
          • Streptantibioticus ferralitis (isolates:2; rSTs:1)
          • Streptantibioticus parmotrematis (isolates:2; rSTs:2)
          • Streptantibioticus rubrisoli (isolates:1; rSTs:1)
          • Streptantibioticus silvisoli (isolates:2; rSTs:2)
        • Streptodolium (isolates:1; rSTs:1)
          • Streptodolium elevatio (isolates:1; rSTs:1)
        • Streptomyces (isolates:5185; rSTs:4227)
          • Candidatus Streptomyces massiliensis (isolates:1; rSTs:1)
          • Streptomyces abikoensis (isolates:2; rSTs:2)
          • Streptomyces abyssalis (isolates:2; rSTs:1)
          • Streptomyces abyssomicinicus (isolates:1; rSTs:1)
          • Streptomyces achromogenes (isolates:5; rSTs:4 tree)
          • Streptomyces acidicola (isolates:2; rSTs:2)
          • Streptomyces acidipaludis (isolates:1; rSTs:1)
          • Streptomyces acidiscabies (isolates:17; rSTs:6 tree)
          • Streptomyces actinomycinicus (isolates:1; rSTs:1)
          • Streptomyces actuosus (isolates:2; rSTs:1)
          • Streptomyces aculeolatus (isolates:1; rSTs:1)
          • Streptomyces adelaidensis (isolates:1; rSTs:1)
          • Streptomyces adustus (isolates:1; rSTs:1)
          • Streptomyces afghaniensis (isolates:2; rSTs:2)
          • Streptomyces africanus (isolates:2; rSTs:2)
          • Streptomyces agglomeratus (isolates:5; rSTs:4 tree)
          • Streptomyces aidingensis (isolates:1; rSTs:1)
          • Streptomyces akebiae (isolates:1; rSTs:1)
          • Streptomyces alanosinicus (isolates:1; rSTs:1)
          • Streptomyces albaduncus (isolates:2; rSTs:1)
          • Streptomyces albiaxialis (isolates:1; rSTs:1)
          • Streptomyces albicerus (isolates:1; rSTs:1)
          • Streptomyces albidochromogenes (isolates:1; rSTs:1)
          • Streptomyces albidoflavus (isolates:84; rSTs:59 tree)
          • Streptomyces albidus (ex Kaewkla and Franco 2022) (isolates:1; rSTs:1)
          • Streptomyces albiflavescens (isolates:1; rSTs:1)
          • Streptomyces albipurpureus (isolates:1; rSTs:1)
          • Streptomyces albireticuli (isolates:5; rSTs:2)
          • Streptomyces albofaciens (isolates:2; rSTs:1)
          • Streptomyces alboflavus (isolates:3; rSTs:3 tree)
          • Streptomyces albogriseolus (isolates:15; rSTs:13 tree)
          • Streptomyces alboniger (isolates:2; rSTs:1)
          • Streptomyces albospinus (isolates:1; rSTs:1)
          • Streptomyces alboverticillatus (isolates:1; rSTs:1)
          • Streptomyces albovinaceus (isolates:1; rSTs:1)
          • Streptomyces alboviridis (isolates:1; rSTs:1)
          • Streptomyces albus (isolates:16; rSTs:11 tree)
          • Streptomyces alfalfae (isolates:5; rSTs:3 tree)
          • Streptomyces alkaliphilus (isolates:2; rSTs:1)
          • Streptomyces alkaliterrae (isolates:3; rSTs:2)
          • Streptomyces althioticus (isolates:2; rSTs:2)
          • Streptomyces altiplanensis (isolates:1; rSTs:1)
          • Streptomyces amakusaensis (isolates:1; rSTs:1)
          • Streptomyces ambofaciens (isolates:2; rSTs:2)
          • Streptomyces amritsarensis (isolates:1; rSTs:1)
          • Streptomyces anandii (isolates:2; rSTs:1)
          • Streptomyces anatolicus (isolates:1; rSTs:1)
          • Streptomyces angustmyceticus (isolates:5; rSTs:2)
          • Streptomyces anthocyanicus (isolates:9; rSTs:8 tree)
          • Streptomyces antibioticus (isolates:1; rSTs:1)
          • Streptomyces antimicrobicus (isolates:1; rSTs:1)
          • Streptomyces antimycoticus (isolates:10; rSTs:8 tree)
          • Streptomyces antioxidans (isolates:1; rSTs:1)
          • Streptomyces antnestii (isolates:1; rSTs:1)
          • Streptomyces anulatus (isolates:36; rSTs:33 tree)
          • Streptomyces apocyni (isolates:1; rSTs:1)
          • Streptomyces apricus (isolates:1; rSTs:1)
          • Streptomyces aquilus (isolates:1; rSTs:1)
          • Streptomyces arboris (isolates:1; rSTs:1)
          • Streptomyces ardesiacus (isolates:7; rSTs:7 tree)
          • Streptomyces arenae (isolates:1; rSTs:1)
          • Streptomyces argenteolus (isolates:1; rSTs:1)
          • Streptomyces argyrophyllae (isolates:1; rSTs:1)
          • Streptomyces armeniacus (isolates:1; rSTs:1)
          • Streptomyces asiaticus (isolates:1; rSTs:1)
          • Streptomyces asoensis (isolates:10; rSTs:8 tree)
          • Streptomyces atratus (isolates:4; rSTs:4 tree)
          • Streptomyces atriruber (isolates:2; rSTs:2)
          • Streptomyces atroolivaceus (isolates:4; rSTs:4 tree)
          • Streptomyces atrovirens (isolates:1; rSTs:1)
          • Streptomyces aurantiacus (isolates:2; rSTs:2)
          • Streptomyces aurantiogriseus (isolates:1; rSTs:1)
          • Streptomyces auratus (isolates:1; rSTs:1)
          • Streptomyces aureocirculatus (isolates:2; rSTs:1)
          • Streptomyces aureoverticillatus (isolates:1; rSTs:1)
          • Streptomyces aureus (isolates:1; rSTs:1)
          • Streptomyces autolyticus (isolates:1; rSTs:1)
          • Streptomyces avermitilis (isolates:19; rSTs:11 tree)
          • Streptomyces avicenniae (isolates:1; rSTs:1)
          • Streptomyces avidinii (isolates:1; rSTs:1)
          • Streptomyces axinellae (isolates:1; rSTs:1)
          • Streptomyces azureus (isolates:1; rSTs:1)
          • Streptomyces baarnensis (isolates:2; rSTs:1)
          • Streptomyces bacillaris (isolates:6; rSTs:6 tree)
          • Streptomyces badius (isolates:2; rSTs:1)
          • Streptomyces bambusae (isolates:1; rSTs:1)
          • Streptomyces barkulensis (isolates:2; rSTs:1)
          • Streptomyces barringtoniae (isolates:1; rSTs:1)
          • Streptomyces bathyalis (isolates:1; rSTs:1)
          • Streptomyces bauhiniae (isolates:5; rSTs:5 tree)
          • Streptomyces beigongshangae (isolates:1; rSTs:1)
          • Streptomyces beihaiensis (isolates:1; rSTs:1)
          • Streptomyces beijiangensis (isolates:2; rSTs:1)
          • Streptomyces benahoarensis (isolates:2; rSTs:1)
          • Streptomyces bicolor (isolates:2; rSTs:1)
          • Streptomyces bikiniensis (isolates:4; rSTs:1)
          • Streptomyces bingchenggensis (isolates:1; rSTs:1)
          • Streptomyces blastmyceticus (isolates:1; rSTs:1)
          • Streptomyces blattellae (isolates:1; rSTs:1)
          • Streptomyces bluensis (isolates:3; rSTs:3 tree)
          • Streptomyces bobili (isolates:1)
          • Streptomyces bohaiensis (isolates:2; rSTs:1)
          • Streptomyces boluensis (isolates:1; rSTs:1)
          • Streptomyces boncukensis (isolates:1; rSTs:1)
          • Streptomyces botrytidirepellens (isolates:1; rSTs:1)
          • Streptomyces bottropensis (isolates:3; rSTs:2)
          • Streptomyces brasiliensis (isolates:1; rSTs:1)
          • Streptomyces brasiliscabiei (isolates:5; rSTs:3 tree)
          • Streptomyces brevispora (isolates:4; rSTs:4 tree)
          • Streptomyces broussonetiae (isolates:1; rSTs:1)
          • Streptomyces buecherae (isolates:9; rSTs:5 tree)
          • Streptomyces bungoensis (isolates:3; rSTs:3 tree)
          • Streptomyces caatingaensis (isolates:1; rSTs:1)
          • Streptomyces cacaoi (isolates:6; rSTs:4 tree)
          • Streptomyces cadmiisoli (isolates:1; rSTs:1)
          • Streptomyces caelestis (isolates:2; rSTs:2)
          • Streptomyces caeruleatus (isolates:1; rSTs:1)
          • Streptomyces cahuitamycinicus (isolates:1; rSTs:1)
          • Streptomyces calidiresistens (isolates:1; rSTs:1)
          • Streptomyces californicus (isolates:12; rSTs:10 tree)
          • Streptomyces calvus (isolates:5; rSTs:3 tree)
          • Streptomyces camelliae (isolates:1; rSTs:1)
          • Streptomyces camponoticapitis (isolates:1; rSTs:1)
          • Streptomyces canarius (isolates:1; rSTs:1)
          • Streptomyces candidus (isolates:2; rSTs:1)
          • Streptomyces cangkringensis (isolates:2; rSTs:2)
          • Streptomyces caniferus (isolates:8; rSTs:7 tree)
          • Streptomyces caniscabiei (isolates:22; rSTs:5 tree)
          • Streptomyces canus (isolates:20; rSTs:20 tree)
          • Streptomyces capillispiralis (isolates:2; rSTs:1)
          • Streptomyces capitiformicae (isolates:2; rSTs:1)
          • Streptomyces capoamus (isolates:2; rSTs:1)
          • Streptomyces capuensis (isolates:2; rSTs:1)
          • Streptomyces carminius (isolates:1; rSTs:1)
          • Streptomyces carpinensis (isolates:1; rSTs:1)
          • Streptomyces catenulae (isolates:2; rSTs:1)
          • Streptomyces cathayae (isolates:1; rSTs:1)
          • Streptomyces cavernae (isolates:1; rSTs:1)
          • Streptomyces cavourensis (isolates:5; rSTs:4 tree)
          • Streptomyces cellostaticus (isolates:2; rSTs:1)
          • Streptomyces cellulosae (isolates:1; rSTs:1)
          • Streptomyces chartreusis (isolates:4; rSTs:2)
          • Streptomyces chattanoogensis (isolates:1; rSTs:1)
          • Streptomyces chengmaiensis (isolates:1; rSTs:1)
          • Streptomyces chiangmaiensis (isolates:2; rSTs:1)
          • Streptomyces chilikensis (isolates:2; rSTs:2)
          • Streptomyces chitinivorans (isolates:2; rSTs:1)
          • Streptomyces chrestomyceticus (isolates:4; rSTs:2)
          • Streptomyces chromofuscus (isolates:2; rSTs:1)
          • Streptomyces chryseus (isolates:4; rSTs:2)
          • Streptomyces chumphonensis (isolates:2; rSTs:1)
          • Streptomyces cinereoruber (isolates:7; rSTs:3 tree)
          • Streptomyces cinerochromogenes (isolates:2; rSTs:2)
          • Streptomyces cinnabarinus (isolates:2; rSTs:1)
          • Streptomyces cinnamoneus (isolates:6; rSTs:3 tree)
          • Streptomyces cirratus (isolates:1; rSTs:1)
          • Streptomyces clavifer (isolates:8; rSTs:8 tree)
          • Streptomyces clavuligerus (isolates:31; rSTs:2)
          • Streptomyces coacervatus (isolates:2; rSTs:1)
          • Streptomyces coelicoflavus (isolates:9; rSTs:9 tree)
          • Streptomyces coelicolor (isolates:13; rSTs:2)
          • Streptomyces coeruleofuscus (isolates:1; rSTs:1)
          • Streptomyces coeruleoprunus (isolates:1; rSTs:1)
          • Streptomyces coeruleorubidus (isolates:9; rSTs:7 tree)
          • Streptomyces coffeae (isolates:1; rSTs:1)
          • Streptomyces collinus (isolates:8; rSTs:6 tree)
          • Streptomyces colonosanans (isolates:1; rSTs:1)
          • Streptomyces composti (isolates:1; rSTs:1)
          • Streptomyces corallincola (isolates:1; rSTs:1)
          • Streptomyces corchorusii (isolates:1; rSTs:1)
          • Streptomyces coriariae (isolates:1; rSTs:1)
          • Streptomyces coryli (isolates:1; rSTs:1)
          • Streptomyces corynorhini (isolates:1; rSTs:1)
          • Streptomyces cremeus (isolates:1; rSTs:1)
          • Streptomyces crystallinus (isolates:1; rSTs:1)
          • Streptomyces cupreus (isolates:1; rSTs:1)
          • Streptomyces curacoi (isolates:1; rSTs:1)
          • Streptomyces cyaneochromogenes (isolates:1; rSTs:1)
          • Streptomyces cyaneofuscatus (isolates:22; rSTs:20 tree)
          • Streptomyces cyaneogriseus (isolates:1; rSTs:1)
          • Streptomyces cyaneus (isolates:1; rSTs:1)
          • Streptomyces cyanogenus (isolates:1; rSTs:1)
          • Streptomyces cylindrosporus (isolates:1; rSTs:1)
          • Streptomyces cynarae (isolates:1; rSTs:1)
          • Streptomyces daghestanicus (isolates:2; rSTs:1)
          • Streptomyces dangxiongensis (isolates:1; rSTs:1)
          • Streptomyces daqingensis (isolates:1; rSTs:1)
          • Streptomyces davaonensis (isolates:1; rSTs:1)
          • Streptomyces deccanensis (isolates:1; rSTs:1)
          • Streptomyces decoyicus (isolates:10; rSTs:7 tree)
          • Streptomyces dengpaensis (isolates:1; rSTs:1)
          • Streptomyces diacarni (isolates:1; rSTs:1)
          • Streptomyces diastaticus (isolates:1; rSTs:1)
          • Streptomyces diastatochromogenes (isolates:1; rSTs:1)
          • Streptomyces dioscori (isolates:1; rSTs:1)
          • Streptomyces djakartensis (isolates:1; rSTs:1)
          • Streptomyces drozdowiczii (isolates:4; rSTs:2)
          • Streptomyces durbertensis (isolates:1; rSTs:1)
          • Streptomyces durhamensis (isolates:2; rSTs:2)
          • Streptomyces durmitorensis (isolates:2; rSTs:1)
          • Streptomyces durocortorensis (isolates:1; rSTs:1)
          • Streptomyces dysideae (isolates:1; rSTs:1)
          • Streptomyces echinatus (isolates:3; rSTs:1)
          • Streptomyces echinoruber (isolates:1; rSTs:1)
          • Streptomyces endocoffeicus (isolates:1; rSTs:1)
          • Streptomyces endophyticus (isolates:1; rSTs:1)
          • Streptomyces enissocaesilis (isolates:1; rSTs:1)
          • Streptomyces erythrochromogenes (isolates:7; rSTs:7 tree)
          • Streptomyces eurocidicus (isolates:3; rSTs:1)
          • Streptomyces europaeiscabiei (isolates:1; rSTs:1)
          • Streptomyces eurythermus (isolates:3; rSTs:2)
          • Streptomyces exfoliatus (isolates:2; rSTs:1)
          • Streptomyces fagopyri (isolates:2; rSTs:2)
          • Streptomyces ferrugineus (isolates:1; rSTs:1)
          • Streptomyces ficellus (isolates:1; rSTs:1)
          • Streptomyces filamentosus (isolates:3; rSTs:2)
          • Streptomyces fildesensis (isolates:1; rSTs:1)
          • Streptomyces filipinensis (isolates:1; rSTs:1)
          • Streptomyces fimbriatus (isolates:1; rSTs:1)
          • Streptomyces fimicarius (isolates:3; rSTs:2)
          • Streptomyces finlayi (isolates:1; rSTs:1)
          • Streptomyces flaveolus (isolates:7; rSTs:7 tree)
          • Streptomyces flaveus (isolates:1)
          • Streptomyces flavidovirens (isolates:3; rSTs:3 tree)
          • Streptomyces flavochromogenes (isolates:1; rSTs:1)
          • Streptomyces flavofungini (isolates:2; rSTs:1)
          • Streptomyces flavotricini (isolates:1; rSTs:1)
          • Streptomyces flavovariabilis (isolates:1; rSTs:1)
          • Streptomyces flavovirens (isolates:1; rSTs:1)
          • Streptomyces fodineus (isolates:1; rSTs:1)
          • Streptomyces formicae (isolates:1; rSTs:1)
          • Streptomyces fradiae (isolates:2; rSTs:1)
          • Streptomyces fragilis (isolates:3; rSTs:1)
          • Streptomyces fructofermentans (isolates:2; rSTs:2)
          • Streptomyces fulvorobeus (isolates:3; rSTs:1)
          • Streptomyces fulvoviolaceus (isolates:2; rSTs:2)
          • Streptomyces fulvoviridis (isolates:1; rSTs:1)
          • Streptomyces fumanus (isolates:3; rSTs:2)
          • Streptomyces fumigatiscleroticus (isolates:1; rSTs:1)
          • Streptomyces fungicidicus (isolates:11; rSTs:4 tree)
          • Streptomyces fuscichromogenes (isolates:1; rSTs:1)
          • Streptomyces fuscigenes (isolates:1; rSTs:1)
          • Streptomyces fuscus (isolates:1; rSTs:1)
          • Streptomyces galbus (isolates:1; rSTs:1)
          • Streptomyces galilaeus (isolates:2; rSTs:1)
          • Streptomyces gancidicus (isolates:1; rSTs:1)
          • Streptomyces gardneri (isolates:5; rSTs:4 tree)
          • Streptomyces gelaticus (isolates:1; rSTs:1)
          • Streptomyces genisteinicus (isolates:1; rSTs:1)
          • Streptomyces geranii (isolates:1; rSTs:1)
          • Streptomyces geysiriensis (isolates:2; rSTs:2)
          • Streptomyces gilvifuscus (isolates:1; rSTs:1)
          • Streptomyces gilvosporeus (isolates:2; rSTs:1)
          • Streptomyces glaucescens (isolates:4; rSTs:3 tree)
          • Streptomyces glaucosporus (isolates:1; rSTs:1)
          • Streptomyces glaucus (isolates:1; rSTs:1)
          • Streptomyces glebosus (isolates:2; rSTs:1)
          • Streptomyces globisporus (isolates:2; rSTs:2)
          • Streptomyces globosus (isolates:2; rSTs:2)
          • Streptomyces glomeratus (isolates:2; rSTs:1)
          • Streptomyces gobiensis (isolates:1; rSTs:1)
          • Streptomyces gobitricini (isolates:1; rSTs:1)
          • Streptomyces goshikiensis (isolates:11; rSTs:10 tree)
          • Streptomyces gossypii (isolates:1; rSTs:1)
          • Streptomyces gossypiisoli (isolates:1; rSTs:1)
          • Streptomyces gougerotii (isolates:2; rSTs:1)
          • Streptomyces graminilatus (isolates:1; rSTs:1)
          • Streptomyces graminofaciens (isolates:1; rSTs:1)
          • Streptomyces griseicoloratus (isolates:1; rSTs:1)
          • Streptomyces griseiscabiei (isolates:3; rSTs:1)
          • Streptomyces griseoaurantiacus (isolates:6; rSTs:6 tree)
          • Streptomyces griseocarneus (isolates:1; rSTs:1)
          • Streptomyces griseochromogenes (isolates:2; rSTs:1)
          • Streptomyces griseoflavus (isolates:1; rSTs:1)
          • Streptomyces griseofuscus (isolates:12; rSTs:11 tree)
          • Streptomyces griseoincarnatus (isolates:1; rSTs:1)
          • Streptomyces griseoloalbus (isolates:2; rSTs:2)
          • Streptomyces griseolus (isolates:3; rSTs:3 tree)
          • Streptomyces griseoluteus (isolates:1; rSTs:1)
          • Streptomyces griseomycini (isolates:4; rSTs:3 tree)
          • Streptomyces griseorubens (isolates:1; rSTs:1)
          • Streptomyces griseoruber (isolates:2; rSTs:1)
          • Streptomyces griseorubiginosus (isolates:14; rSTs:10 tree)
          • Streptomyces griseosporeus (isolates:1; rSTs:1)
          • Streptomyces griseoviridis (isolates:8; rSTs:6 tree)
          • Streptomyces griseus (isolates:28; rSTs:10 tree)
          • Streptomyces gulbargensis (isolates:1; rSTs:1)
          • Streptomyces guryensis (isolates:1; rSTs:1)
          • Streptomyces hainanensis (isolates:1; rSTs:1)
          • Streptomyces haliclonae (isolates:1; rSTs:1)
          • Streptomyces halobius (isolates:1; rSTs:1)
          • Streptomyces halstedii (isolates:6; rSTs:3 tree)
          • Streptomyces harbinensis (isolates:2; rSTs:2)
          • Streptomyces harenosi (isolates:1; rSTs:1)
          • Streptomyces hawaiiensis (isolates:1; rSTs:1)
          • Streptomyces hebeiensis (isolates:1; rSTs:1)
          • Streptomyces heilongjiangensis (isolates:1; rSTs:1)
          • Streptomyces herbicida (isolates:1; rSTs:1)
          • Streptomyces hilarionis (isolates:1; rSTs:1)
          • Streptomyces himalayensis (isolates:2; rSTs:2)
          • Streptomyces himastatinicus (isolates:1; rSTs:1)
          • Streptomyces hiroshimensis (isolates:1; rSTs:1)
          • Streptomyces hirsutus (isolates:10; rSTs:10 tree)
          • Streptomyces hokutonensis (isolates:2; rSTs:2)
          • Streptomyces hoynatensis (isolates:1; rSTs:1)
          • Streptomyces huasconensis (isolates:8; rSTs:3 tree)
          • Streptomyces huiliensis (isolates:1; rSTs:1)
          • Streptomyces humi (isolates:1; rSTs:1)
          • Streptomyces humicola (isolates:1; rSTs:1)
          • Streptomyces humidus (isolates:3; rSTs:2)
          • Streptomyces hundungensis (isolates:3; rSTs:2)
          • Streptomyces hyaluromycini (isolates:2; rSTs:2)
          • Streptomyces hyderabadensis (isolates:2; rSTs:1)
          • Streptomyces hydrogenans (isolates:10; rSTs:7 tree)
          • Streptomyces hygroscopicus (isolates:17; rSTs:13 tree)
          • Streptomyces iakyrus (isolates:4; rSTs:2)
          • Streptomyces iconiensis (isolates:1; rSTs:1)
          • Streptomyces incarnatus (isolates:2; rSTs:1)
          • Streptomyces indiaensis (isolates:2; rSTs:1)
          • Streptomyces indicus (isolates:1; rSTs:1)
          • Streptomyces indonesiensis (isolates:1; rSTs:1)
          • Streptomyces inhibens (isolates:2; rSTs:2)
          • Streptomyces inusitatus (isolates:1; rSTs:1)
          • Streptomyces ipomoeae (isolates:9; rSTs:5 tree)
          • Streptomyces iranensis (isolates:3; rSTs:1)
          • Streptomyces janthinus (isolates:2; rSTs:1)
          • Streptomyces javensis (isolates:1; rSTs:1)
          • Streptomyces jeddahensis (isolates:1; rSTs:1)
          • Streptomyces jietaisiensis (isolates:2; rSTs:2)
          • Streptomyces jumonjinensis (isolates:2; rSTs:2)
          • Streptomyces justiciae (isolates:3; rSTs:3 tree)
          • Streptomyces kanamyceticus (isolates:2; rSTs:1)
          • Streptomyces kanasensis (isolates:1; rSTs:1)
          • Streptomyces kaniharaensis (isolates:1; rSTs:1)
          • Streptomyces kasugaensis (isolates:2; rSTs:1)
          • Streptomyces katrae (isolates:1; rSTs:1)
          • Streptomyces katsurahamanus (isolates:1; rSTs:1)
          • Streptomyces kebangsaanensis (isolates:1; rSTs:1)
          • Streptomyces klenkii (isolates:4; rSTs:3 tree)
          • Streptomyces koelreuteriae (isolates:2; rSTs:1)
          • Streptomyces koyangensis (isolates:4; rSTs:4 tree)
          • Streptomyces kronopolitis (isolates:3; rSTs:3 tree)
          • Streptomyces kunmingensis (isolates:2; rSTs:1)
          • Streptomyces kurssanovii (isolates:2; rSTs:2)
          • Streptomyces lacrimifluminis (isolates:2; rSTs:1)
          • Streptomyces laculatispora (isolates:2; rSTs:1)
          • Streptomyces lanatus (isolates:2; rSTs:1)
          • Streptomyces lannensis (isolates:1; rSTs:1)
          • Streptomyces lasalocidi (isolates:1; rSTs:1)
          • Streptomyces lasiicapitis (isolates:1; rSTs:1)
          • Streptomyces lateritius (isolates:1; rSTs:1)
          • Streptomyces laurentii (isolates:2; rSTs:2)
          • Streptomyces lavendofoliae (isolates:2; rSTs:2)
          • Streptomyces lavendulae (isolates:13; rSTs:9 tree)
          • Streptomyces lavenduligriseus (isolates:3; rSTs:3 tree)
          • Streptomyces lavendulocolor (isolates:6; rSTs:4 tree)
          • Streptomyces leeuwenhoekii (isolates:3; rSTs:2)
          • Streptomyces levis (isolates:1; rSTs:1)
          • Streptomyces liangshanensis (isolates:1; rSTs:1)
          • Streptomyces libani (isolates:4; rSTs:2)
          • Streptomyces lichenis (isolates:1; rSTs:1)
          • Streptomyces lienomycini (isolates:2; rSTs:1)
          • Streptomyces lilacinus (isolates:1; rSTs:1)
          • Streptomyces liliifuscus (isolates:1; rSTs:1)
          • Streptomyces liliiviolaceus (isolates:1; rSTs:1)
          • Streptomyces lincolnensis (isolates:5; rSTs:2)
          • Streptomyces litmocidini (isolates:2; rSTs:2)
          • Streptomyces lividans (isolates:6; rSTs:3 tree)
          • Streptomyces lomondensis (isolates:2; rSTs:1)
          • Streptomyces lonarensis (isolates:2; rSTs:1)
          • Streptomyces longhuiensis (isolates:1; rSTs:1)
          • Streptomyces longisporoflavus (isolates:1; rSTs:1)
          • Streptomyces longispororuber (isolates:2; rSTs:2)
          • Streptomyces longisporus (isolates:1; rSTs:1)
          • Streptomyces longwoodensis (isolates:6; rSTs:6 tree)
          • Streptomyces lucensis (isolates:2; rSTs:1)
          • Streptomyces lunaelactis (isolates:18; rSTs:16 tree)
          • Streptomyces lunalinharesii (isolates:1; rSTs:1)
          • Streptomyces luomodiensis (isolates:1; rSTs:1)
          • Streptomyces luridiscabiei (isolates:1; rSTs:1)
          • Streptomyces lushanensis (isolates:1; rSTs:1)
          • Streptomyces luteireticuli (isolates:1; rSTs:1)
          • Streptomyces luteocolor (isolates:1; rSTs:1)
          • Streptomyces luteogriseus (isolates:5; rSTs:4 tree)
          • Streptomyces luteolifulvus (isolates:1; rSTs:1)
          • Streptomyces luteosporeus (isolates:1; rSTs:1)
          • Streptomyces luteoverticillatus (isolates:1; rSTs:1)
          • Streptomyces lycii (isolates:1; rSTs:1)
          • Streptomyces lydicamycinicus (isolates:2; rSTs:2)
          • Streptomyces lydicus (isolates:17; rSTs:8 tree)
          • Streptomyces lysosuperificus (isolates:1; rSTs:1)
          • Streptomyces macrolidinus (isolates:1; rSTs:1)
          • Streptomyces macrosporus (isolates:1; rSTs:1)
          • Streptomyces malachitofuscus (isolates:1; rSTs:1)
          • Streptomyces malaysiense (isolates:1; rSTs:1)
          • Streptomyces malaysiensis (isolates:2; rSTs:1)
          • Streptomyces mangrovisoli (isolates:1; rSTs:1)
          • Streptomyces marianii (isolates:1; rSTs:1)
          • Streptomyces marincola (isolates:2; rSTs:2)
          • Streptomyces marispadix (isolates:1; rSTs:1)
          • Streptomyces marokkonensis (isolates:1; rSTs:1)
          • Streptomyces mashuensis (isolates:1; rSTs:1)
          • Streptomyces massasporeus (isolates:11; rSTs:11 tree)
          • Streptomyces mauvecolor (isolates:1; rSTs:1)
          • Streptomyces mediolani (isolates:1; rSTs:1)
          • Streptomyces megasporus (isolates:1; rSTs:1)
          • Streptomyces melanogenes (isolates:2; rSTs:3 tree)
          • Streptomyces melanosporofaciens (isolates:1; rSTs:1)
          • Streptomyces meridianus (isolates:1; rSTs:1)
          • Streptomyces mesophilus (isolates:2; rSTs:2)
          • Streptomyces mexicanus (isolates:4; rSTs:2)
          • Streptomyces microflavus (isolates:22; rSTs:19 tree)
          • Streptomyces milbemycinicus (isolates:1; rSTs:1)
          • Streptomyces mimosae (isolates:1; rSTs:1)
          • Streptomyces minutiscleroticus (isolates:3; rSTs:2)
          • Streptomyces mirabilis (isolates:1; rSTs:1)
          • Streptomyces misionensis (isolates:9; rSTs:9 tree)
          • Streptomyces mobaraensis (isolates:7; rSTs:5 tree)
          • Streptomyces monashensis (isolates:2; rSTs:2)
          • Streptomyces monomycini (isolates:2; rSTs:1)
          • Streptomyces montanisoli (isolates:1; rSTs:1)
          • Streptomyces montanus (isolates:1; rSTs:1)
          • Streptomyces morookaense (isolates:3; rSTs:2)
          • Streptomyces muensis (isolates:1; rSTs:1)
          • Streptomyces murinus (isolates:12; rSTs:9 tree)
          • Streptomyces musisoli (isolates:1; rSTs:1)
          • Streptomyces mutabilis (isolates:4; rSTs:4 tree)
          • Streptomyces mutomycini (isolates:2; rSTs:2)
          • Streptomyces naganishii (isolates:2; rSTs:1)
          • Streptomyces nanshensis (isolates:2; rSTs:1)
          • Streptomyces naphthomycinicus (isolates:1; rSTs:1)
          • Streptomyces narbonensis (isolates:5; rSTs:4 tree)
          • Streptomyces natalensis (isolates:2; rSTs:1)
          • Streptomyces netropsis (isolates:3; rSTs:2)
          • Streptomyces neyagawaensis (isolates:4; rSTs:1)
          • Streptomyces niger (isolates:1; rSTs:1)
          • Streptomyces nigra (isolates:6; rSTs:6 tree)
          • Streptomyces nigrescens (isolates:1; rSTs:1)
          • Streptomyces niphimycinicus (isolates:1; rSTs:1)
          • Streptomyces nitrosporeus (isolates:3; rSTs:2)
          • Streptomyces niveiscabiei (isolates:2; rSTs:2)
          • Streptomyces niveoruber (isolates:1; rSTs:1)
          • Streptomyces niveus (isolates:21; rSTs:19 tree)
          • Streptomyces nodosus (isolates:6; rSTs:3 tree)
          • Streptomyces nogalater (isolates:1; rSTs:1)
          • Streptomyces nojiriensis (isolates:4; rSTs:2)
          • Streptomyces nondiastaticus (isolates:1; rSTs:1)
          • Streptomyces noursei (isolates:3; rSTs:2 tree)
          • Streptomyces novaecaesareae (isolates:1; rSTs:1)
          • Streptomyces nymphaeiformis (isolates:1; rSTs:1)
          • Streptomyces oceani (isolates:1; rSTs:1)
          • Streptomyces ochraceiscleroticus (isolates:1; rSTs:1)
          • Streptomyces odonnellii (isolates:1; rSTs:1)
          • Streptomyces odorifer (isolates:1; rSTs:1)
          • Streptomyces olindensis (isolates:3; rSTs:3 tree)
          • Streptomyces olivaceoviridis (isolates:1; rSTs:1)
          • Streptomyces olivaceus (isolates:49; rSTs:27 tree)
          • Streptomyces olivochromogenes (isolates:2; rSTs:1)
          • Streptomyces olivoreticuli (isolates:1; rSTs:1)
          • Streptomyces olivoverticillatus (isolates:1; rSTs:1)
          • Streptomyces omiyaensis (isolates:1; rSTs:1)
          • Streptomyces orinoci (isolates:2; rSTs:1)
          • Streptomyces ortus (isolates:1; rSTs:1)
          • Streptomyces oryzae (isolates:1; rSTs:1)
          • Streptomyces osmaniensis (isolates:1; rSTs:1)
          • Streptomyces ossamyceticus (isolates:4; rSTs:4 tree)
          • Streptomyces otsuchiensis (isolates:1; rSTs:1)
          • Streptomyces pacificus (isolates:1; rSTs:1)
          • Streptomyces pactum (isolates:2; rSTs:1)
          • Streptomyces pakalii (isolates:1; rSTs:1)
          • Streptomyces palmae (isolates:1; rSTs:1)
          • Streptomyces paludis (isolates:1; rSTs:1)
          • Streptomyces panaciradicis (isolates:1; rSTs:1)
          • Streptomyces paradoxus (isolates:2; rSTs:1)
          • Streptomyces paromomycinus (isolates:2; rSTs:1)
          • Streptomyces parvulus (isolates:20; rSTs:18 tree)
          • Streptomyces parvus (isolates:14; rSTs:11 tree)
          • Streptomyces pathocidini (isolates:1; rSTs:1)
          • Streptomyces peruviensis (isolates:1; rSTs:1)
          • Streptomyces peucetius (isolates:1; rSTs:1)
          • Streptomyces phaeochromogenes (isolates:11; rSTs:10 tree)
          • Streptomyces phaeofaciens (isolates:2; rSTs:1)
          • Streptomyces phaeolivaceus (isolates:1; rSTs:1)
          • Streptomyces phaeoluteigriseus (isolates:2; rSTs:3 tree)
          • Streptomyces phyllanthi (isolates:2; rSTs:1)
          • Streptomyces physcomitrii (isolates:2; rSTs:2)
          • Streptomyces phytohabitans (isolates:1; rSTs:1)
          • Streptomyces phytophilus (isolates:1)
          • Streptomyces pilosus (isolates:3; rSTs:2)
          • Streptomyces pini (isolates:1; rSTs:1)
          • Streptomyces pinistramenti (isolates:1; rSTs:1)
          • Streptomyces piniterrae (isolates:1; rSTs:1)
          • Streptomyces platensis (isolates:5; rSTs:3 tree)
          • Streptomyces plicatus (isolates:1; rSTs:1)
          • Streptomyces plumbidurans (isolates:1; rSTs:1)
          • Streptomyces plumbiresistens (isolates:1; rSTs:1)
          • Streptomyces pluricolorescens (isolates:1; rSTs:1)
          • Streptomyces pluripotens (isolates:2; rSTs:1)
          • Streptomyces polyasparticus (isolates:1; rSTs:1)
          • Streptomyces polychromogenes (isolates:1; rSTs:1)
          • Streptomyces poonensis (isolates:2; rSTs:1)
          • Streptomyces populi (isolates:1; rSTs:1)
          • Streptomyces poriferorum (isolates:2; rSTs:1)
          • Streptomyces prasinopilosus (isolates:3; rSTs:1)
          • Streptomyces prasinus (isolates:7; rSTs:6 tree)
          • Streptomyces pratensis (isolates:1; rSTs:1)
          • Streptomyces pristinaespiralis (isolates:6; rSTs:3 tree)
          • Streptomyces profundus (isolates:1; rSTs:1)
          • Streptomyces prunicolor (isolates:6; rSTs:4 tree)
          • Streptomyces pseudogriseolus (isolates:1; rSTs:1)
          • Streptomyces pseudovenezuelae (isolates:6; rSTs:5 tree)
          • Streptomyces pulveraceus (isolates:1; rSTs:1)
          • Streptomyces puniciscabiei (isolates:3; rSTs:2)
          • Streptomyces purpurascens (isolates:3; rSTs:3 tree)
          • Streptomyces purpureus (isolates:2; rSTs:2)
          • Streptomyces purpurogeneiscleroticus (isolates:1; rSTs:1)
          • Streptomyces pyridomyceticus (isolates:1; rSTs:1)
          • Streptomyces pyxinae (isolates:1; rSTs:1)
          • Streptomyces pyxinicus (isolates:1; rSTs:1)
          • Streptomyces qaidamensis (isolates:1; rSTs:1)
          • Streptomyces qinglanensis (isolates:2; rSTs:1)
          • Streptomyces qinzhouensis (isolates:1; rSTs:1)
          • Streptomyces racemochromogenes (isolates:1; rSTs:1)
          • Streptomyces radicis (isolates:2; rSTs:1)
          • Streptomyces radiopugnans (isolates:1; rSTs:1)
          • Streptomyces rameus (isolates:1; rSTs:1)
          • Streptomyces ramulosus (isolates:1; rSTs:1)
          • Streptomyces rapamycinicus (isolates:5; rSTs:1)
          • Streptomyces recifensis (isolates:1; rSTs:1)
          • Streptomyces rectiverticillatus (isolates:1; rSTs:1)
          • Streptomyces rectiviolaceus (isolates:1; rSTs:1)
          • Streptomyces regalis (isolates:1; rSTs:1)
          • Streptomyces reniochalinae (isolates:1; rSTs:1)
          • Streptomyces resistomycificus (isolates:3; rSTs:1)
          • Streptomyces reticuli (isolates:1; rSTs:1)
          • Streptomyces reticuliscabiei (isolates:1; rSTs:1)
          • Streptomyces rhizoryzae (isolates:1; rSTs:1)
          • Streptomyces rhizosphaericola (isolates:1; rSTs:1)
          • Streptomyces rhizosphaericus (isolates:4; rSTs:1)
          • Streptomyces rhizosphaerihabitans (isolates:1; rSTs:1)
          • Streptomyces rishiriensis (isolates:2; rSTs:2)
          • Streptomyces rochei (isolates:1; rSTs:1)
          • Streptomyces roseicoloratus (isolates:2; rSTs:2)
          • Streptomyces roseifaciens (isolates:1; rSTs:1)
          • Streptomyces roseirectus (isolates:1; rSTs:1)
          • Streptomyces roseiscleroticus (isolates:1; rSTs:1)
          • Streptomyces roseochromogenus (isolates:1; rSTs:1)
          • Streptomyces roseofulvus (isolates:2; rSTs:2)
          • Streptomyces roseolilacinus (isolates:1; rSTs:1)
          • Streptomyces roseolus (isolates:2; rSTs:2)
          • Streptomyces roseoverticillatus (isolates:4; rSTs:4 tree)
          • Streptomyces roseoviolaceus (isolates:1; rSTs:1)
          • Streptomyces roseoviridis (isolates:1; rSTs:1)
          • Streptomyces roseus (isolates:2; rSTs:2)
          • Streptomyces rubellomurinus (isolates:2; rSTs:2)
          • Streptomyces rubiginosohelvolus (isolates:12; rSTs:12 tree)
          • Streptomyces rubiginosus (isolates:1; rSTs:1)
          • Streptomyces rubradiris (isolates:4; rSTs:1)
          • Streptomyces rubrogriseus (isolates:2; rSTs:1)
          • Streptomyces rubrolavendulae (isolates:1; rSTs:1)
          • Streptomyces rugosispiralis (isolates:1; rSTs:1)
          • Streptomyces rutgersensis (isolates:1; rSTs:1)
          • Streptomyces sabulosicollis (isolates:1; rSTs:1)
          • Streptomyces salinarius (isolates:3; rSTs:3 tree)
          • Streptomyces sampsonii (isolates:1; rSTs:2)
          • Streptomyces samsunensis (isolates:1; rSTs:1)
          • Streptomyces sannanensis (isolates:1; rSTs:1)
          • Streptomyces sanyensis (isolates:1; rSTs:1)
          • Streptomyces sasae (isolates:1; rSTs:1)
          • Streptomyces scabichelini (isolates:1; rSTs:1)
          • Streptomyces scabiei (isolates:75; rSTs:18 tree)
          • Streptomyces scopuliridis (isolates:6; rSTs:4 tree)
          • Streptomyces sedi (isolates:2; rSTs:1)
          • Streptomyces sennicomposti (isolates:1; rSTs:1)
          • Streptomyces seoulensis (isolates:4; rSTs:3 tree)
          • Streptomyces shaanxiensis (isolates:1; rSTs:1)
          • Streptomyces shenzhenensis (isolates:2; rSTs:2)
          • Streptomyces showdoensis (isolates:2; rSTs:1)
          • Streptomyces siamensis (isolates:1)
          • Streptomyces sichuanensis (isolates:1; rSTs:1)
          • Streptomyces silaceus (isolates:1; rSTs:1)
          • Streptomyces silvae (isolates:2; rSTs:2)
          • Streptomyces silvensis (isolates:1; rSTs:1)
          • Streptomyces silvisoli (isolates:1; rSTs:1)
          • Streptomyces similanensis (isolates:1; rSTs:1)
          • Streptomyces sindenensis (isolates:1; rSTs:1)
          • Streptomyces sioyaensis (isolates:2; rSTs:2)
          • Streptomyces smaragdinus (isolates:1; rSTs:1)
          • Streptomyces smyrnaeus (isolates:4; rSTs:4 tree)
          • Streptomyces sodiiphilus (isolates:1; rSTs:1)
          • Streptomyces solaniscabiei (isolates:4; rSTs:1)
          • Streptomyces solincola (isolates:1; rSTs:1)
          • Streptomyces solisilvae (isolates:1; rSTs:1)
          • Streptomyces somaliensis (isolates:2; rSTs:2)
          • Streptomyces sp. (isolates:3041; rSTs:2640)
          • Streptomyces sparsogenes (isolates:9; rSTs:7 tree)
          • Streptomyces specialis (isolates:1; rSTs:1)
          • Streptomyces spectabilis (isolates:8; rSTs:3 tree)
          • Streptomyces speibonae (isolates:1; rSTs:1)
          • Streptomyces spinosisporus (isolates:1; rSTs:1)
          • Streptomyces spinosus (isolates:1; rSTs:1)
          • Streptomyces spinoverrucosus (isolates:2; rSTs:1)
          • Streptomyces spiralis (isolates:2; rSTs:2)
          • Streptomyces spiramenti (isolates:1; rSTs:1)
          • Streptomyces spiramyceticus (isolates:2; rSTs:1)
          • Streptomyces spirodelae (isolates:1; rSTs:1)
          • Streptomyces spongiae (isolates:1; rSTs:1)
          • Streptomyces spongiicola (isolates:3; rSTs:3 tree)
          • Streptomyces sporangiiformans (isolates:2; rSTs:1)
          • Streptomyces spororaveus (isolates:3; rSTs:2)
          • Streptomyces stelliscabiei (isolates:17; rSTs:6 tree)
          • Streptomyces stramineus (isolates:1; rSTs:1)
          • Streptomyces subrutilus (isolates:5; rSTs:4 tree)
          • Streptomyces sudanensis (isolates:4; rSTs:2)
          • Streptomyces sulfonofaciens (isolates:1; rSTs:1)
          • Streptomyces sulphureus (isolates:1; rSTs:1)
          • Streptomyces sviceus (isolates:2; rSTs:2)
          • Streptomyces swartbergensis (isolates:1; rSTs:1)
          • Streptomyces synnematoformans (isolates:1; rSTs:1)
          • Streptomyces syringium (isolates:10; rSTs:7 tree)
          • Streptomyces tagetis (isolates:1; rSTs:1)
          • Streptomyces tailanensis (isolates:1; rSTs:1)
          • Streptomyces taklimakanensis (isolates:1; rSTs:1)
          • Streptomyces tamarix (isolates:1; rSTs:1)
          • Streptomyces tanashiensis (isolates:9; rSTs:7 tree)
          • Streptomyces tardus (isolates:1; rSTs:1)
          • Streptomyces tateyamensis (isolates:1; rSTs:1)
          • Streptomyces tauricus (isolates:5; rSTs:5 tree)
          • Streptomyces telluris (isolates:2; rSTs:1)
          • Streptomyces tendae (isolates:1; rSTs:1)
          • Streptomyces termitum (isolates:2; rSTs:2)
          • Streptomyces thermoalcalitolerans (isolates:1; rSTs:1)
          • Streptomyces thermocarboxydovorans (isolates:1; rSTs:1)
          • Streptomyces thermocarboxydus (isolates:5; rSTs:4 tree)
          • Streptomyces thermodiastaticus (isolates:2; rSTs:1)
          • Streptomyces thermolilacinus (isolates:2; rSTs:2)
          • Streptomyces thermolineatus (isolates:1; rSTs:1)
          • Streptomyces thermospinosisporus (isolates:1; rSTs:1)
          • Streptomyces thermotolerans (isolates:1)
          • Streptomyces thermoviolaceus (isolates:5; rSTs:5 tree)
          • Streptomyces thermovulgaris (isolates:1; rSTs:1)
          • Streptomyces thinghirensis (isolates:1; rSTs:1)
          • Streptomyces tibetensis (isolates:7; rSTs:6 tree)
          • Streptomyces tirandamycinicus (isolates:3; rSTs:3 tree)
          • Streptomyces torulosus (isolates:1; rSTs:1)
          • Streptomyces toxytricini (isolates:2; rSTs:2)
          • Streptomyces toyocaensis (isolates:2; rSTs:1)
          • Streptomyces tremellae (isolates:1; rSTs:1)
          • Streptomyces tricolor (isolates:2; rSTs:1)
          • Streptomyces triculaminicus (isolates:2; rSTs:2)
          • Streptomyces triticagri (isolates:1; rSTs:1)
          • Streptomyces triticiradicis (isolates:1; rSTs:1)
          • Streptomyces triticirhizae (isolates:1; rSTs:1)
          • Streptomyces triticisoli (isolates:1; rSTs:1)
          • Streptomyces tropicalis (isolates:1; rSTs:1)
          • Streptomyces tsukubensis (isolates:2; rSTs:1)
          • Streptomyces tubbatahanensis (isolates:1; rSTs:1)
          • Streptomyces tubercidicus (isolates:5; rSTs:4 tree)
          • Streptomyces tuirus (isolates:3; rSTs:2)
          • Streptomyces turgidiscabies (isolates:1; rSTs:1)
          • Streptomyces typhae (isolates:1; rSTs:1)
          • Streptomyces umbrinus (isolates:8; rSTs:7 tree)
          • Streptomyces uncialis (isolates:4; rSTs:4 tree)
          • Streptomyces ureilyticus (isolates:1; rSTs:1)
          • Streptomyces variabilis (isolates:1)
          • Streptomyces varsoviensis (isolates:4; rSTs:2)
          • Streptomyces vastus (isolates:1; rSTs:1)
          • Streptomyces venetus (isolates:1; rSTs:1)
          • Streptomyces venezuelae (isolates:12; rSTs:4 tree)
          • Streptomyces verrucosisporus (isolates:1; rSTs:1)
          • Streptomyces vietnamensis (isolates:2; rSTs:2)
          • Streptomyces vilmorinianum (isolates:1; rSTs:1)
          • Streptomyces vinaceus (isolates:2; rSTs:1)
          • Streptomyces vinaceusdrappus (isolates:1; rSTs:1)
          • Streptomyces violaceochromogenes (isolates:2; rSTs:1)
          • Streptomyces violaceoruber (isolates:2; rSTs:2)
          • Streptomyces violaceorubidus (isolates:2; rSTs:2)
          • Streptomyces violaceus (isolates:1)
          • Streptomyces violaceusniger (isolates:2; rSTs:2)
          • Streptomyces violarus (isolates:2; rSTs:1)
          • Streptomyces violascens (isolates:2; rSTs:1)
          • Streptomyces violens (isolates:1; rSTs:1)
          • Streptomyces virginiae (isolates:18; rSTs:15 tree)
          • Streptomyces viridifaciens (isolates:2; rSTs:1)
          • Streptomyces viridiviolaceus (isolates:1; rSTs:1)
          • Streptomyces viridochromogenes (isolates:1; rSTs:1)
          • Streptomyces viridosporus (isolates:7; rSTs:6 tree)
          • Streptomyces wadayamensis (isolates:1)
          • Streptomyces wedmorensis (isolates:2; rSTs:2)
          • Streptomyces werraensis (isolates:15; rSTs:13 tree)
          • Streptomyces wuyuanensis (isolates:3; rSTs:3 tree)
          • Streptomyces xanthii (isolates:1; rSTs:1)
          • Streptomyces xanthochromogenes (isolates:8; rSTs:7 tree)
          • Streptomyces xantholiticus (isolates:2; rSTs:2)
          • Streptomyces xanthophaeus (isolates:5; rSTs:4 tree)
          • Streptomyces xiamenensis (isolates:2; rSTs:2)
          • Streptomyces xiaopingdaonensis (isolates:1; rSTs:1)
          • Streptomyces xinghaiensis (isolates:3; rSTs:4 tree)
          • Streptomyces xylophagus (isolates:1; rSTs:1)
          • Streptomyces yangpuensis (isolates:3; rSTs:3 tree)
          • Streptomyces yanii (isolates:1; rSTs:1)
          • Streptomyces yatensis (isolates:2; rSTs:1)
          • Streptomyces yerevanensis (isolates:1; rSTs:1)
          • Streptomyces yogyakartensis (isolates:1; rSTs:1)
          • Streptomyces yokosukanensis (isolates:2; rSTs:2)
          • Streptomyces yunnanensis (isolates:2; rSTs:2)
          • Streptomyces zagrosensis (isolates:1; rSTs:1)
          • Streptomyces zaomyceticus (isolates:6; rSTs:6 tree)
          • Streptomyces zhaozhouensis (isolates:1; rSTs:1)
          • Streptomyces zhihengii (isolates:3; rSTs:3 tree)
          • Streptomyces zinciresistens (isolates:1; rSTs:1)
          • Streptomyces zingiberis (isolates:1; rSTs:1)
          • Streptomyces ziwulingensis (isolates:1; rSTs:1)
          • [Kitasatospora] papulosa (isolates:3; rSTs:3 tree)
        • Wenjunlia (isolates:3; rSTs:2)
          • Wenjunlia tyrosinilytica (isolates:1; rSTs:1)
          • Wenjunlia vitaminophila (isolates:2; rSTs:1)
        • Yinghuangia (isolates:3; rSTs:3 tree)
          • Yinghuangia aomiensis (isolates:1; rSTs:1)
          • Yinghuangia seranimata (isolates:1; rSTs:1)
          • Yinghuangia soli (isolates:1; rSTs:1)
    • Micrococcales (isolates:4496; rSTs:3472)
      • Beutenbergiaceae (isolates:8; rSTs:8 tree)
        • Beutenbergia (isolates:1; rSTs:1)
          • Beutenbergia cavernae (isolates:1; rSTs:1)
        • Litorihabitans (isolates:1; rSTs:1)
          • Litorihabitans aurantiacus (isolates:1; rSTs:1)
        • Miniimonas (isolates:2; rSTs:2)
          • Miniimonas arenae (isolates:1; rSTs:1)
          • Miniimonas sp. (isolates:1; rSTs:1)
        • Salana (isolates:1; rSTs:1)
          • Salana multivorans (isolates:1; rSTs:1)
        • Serinibacter (isolates:3; rSTs:3 tree)
          • Serinibacter arcticus (isolates:2; rSTs:2)
          • Serinibacter salmoneus (isolates:1; rSTs:1)
      • Bogoriellaceae (isolates:30; rSTs:22 tree)
        • Bogoriella (isolates:1; rSTs:1)
          • Bogoriella caseilytica (isolates:1; rSTs:1)
        • Georgenia (isolates:29; rSTs:21 tree)
          • Georgenia daeguensis (isolates:1; rSTs:1)
          • Georgenia faecalis (isolates:2; rSTs:2)
          • Georgenia halophila (isolates:1; rSTs:1)
          • Georgenia muralis (isolates:1; rSTs:1)
          • Georgenia ruanii (isolates:2; rSTs:1)
          • Georgenia satyanarayanai (isolates:2; rSTs:2)
          • Georgenia soli (isolates:1; rSTs:1)
          • Georgenia sp. (isolates:11; rSTs:6 tree)
          • Georgenia subflava (isolates:2; rSTs:1)
          • Georgenia thermotolerans (isolates:2; rSTs:1)
          • Georgenia wutianyii (isolates:1; rSTs:1)
          • Georgenia yuyongxinii (isolates:2; rSTs:2)
          • Oceanitalea stevensii (isolates:1; rSTs:1)
      • Brevibacteriaceae (isolates:174; rSTs:147 tree)
        • Brevibacterium (isolates:168; rSTs:142 tree)
          • Brevibacterium album (isolates:1; rSTs:1)
          • Brevibacterium ammoniilyticum (isolates:2; rSTs:1)
          • Brevibacterium antiquum (isolates:3; rSTs:2)
          • Brevibacterium atlanticum (isolates:1; rSTs:1)
          • Brevibacterium aurantiacum (isolates:28; rSTs:25 tree)
          • Brevibacterium casei (isolates:24; rSTs:13 tree)
          • Brevibacterium celere (isolates:1; rSTs:1)
          • Brevibacterium daeguense (isolates:2; rSTs:1)
          • Brevibacterium epidermidis (isolates:2; rSTs:2)
          • Brevibacterium gallinarum (isolates:1; rSTs:1)
          • Brevibacterium ihuae (isolates:1; rSTs:1)
          • Brevibacterium iodinum (isolates:2; rSTs:1)
          • Brevibacterium jeotgali (isolates:2; rSTs:1)
          • Brevibacterium limosum (isolates:1; rSTs:1)
          • Brevibacterium linens (isolates:4; rSTs:3 tree)
          • Brevibacterium luteolum (isolates:13; rSTs:8 tree)
          • Brevibacterium marinum (isolates:2; rSTs:1)
          • Brevibacterium mcbrellneri (isolates:1; rSTs:1)
          • Brevibacterium oceani (isolates:2; rSTs:2)
          • Brevibacterium paucivorans (isolates:4; rSTs:4 tree)
          • Brevibacterium permense (isolates:2; rSTs:1)
          • Brevibacterium pigmentatum (isolates:1; rSTs:1)
          • Brevibacterium pityocampae (isolates:1; rSTs:1)
          • Brevibacterium ravenspurgense (isolates:6; rSTs:5 tree)
          • Brevibacterium renqingii (isolates:2; rSTs:2)
          • Brevibacterium rongguiense (isolates:1; rSTs:1)
          • Brevibacterium salitolerans (isolates:1; rSTs:1)
          • Brevibacterium samyangense (isolates:1; rSTs:1)
          • Brevibacterium sandarakinum (isolates:1; rSTs:1)
          • Brevibacterium sanguinis (isolates:1)
          • Brevibacterium sediminis (isolates:4; rSTs:3 tree)
          • Brevibacterium senegalense (isolates:2; rSTs:1)
          • Brevibacterium siliguriense (isolates:1; rSTs:1)
          • Brevibacterium sp. (isolates:42; rSTs:48 tree)
          • Brevibacterium spongiae (isolates:1; rSTs:1)
          • Brevibacterium yomogidense (isolates:2; rSTs:1)
          • Brevibacterium zhoupengii (isolates:2; rSTs:2)
        • Saxibacter (isolates:1; rSTs:1)
          • Saxibacter everestensis (isolates:1; rSTs:1)
        • Sediminivirga (isolates:3; rSTs:2)
          • Sediminivirga luteola (isolates:3; rSTs:2)
        • Spelaeicoccus (isolates:2; rSTs:2)
          • Spelaeicoccus albus (isolates:2; rSTs:2)
      • Cellulomonadaceae (isolates:171; rSTs:127 tree)
        • Actinotalea (isolates:15; rSTs:11 tree)
          • Actinotalea caeni (isolates:1; rSTs:1)
          • Actinotalea fermentans (isolates:3; rSTs:1)
          • Actinotalea ferrariae (isolates:1; rSTs:1)
          • Actinotalea lenta (isolates:2; rSTs:2)
          • Actinotalea soli (isolates:1; rSTs:1)
          • Actinotalea solisilvae (isolates:1; rSTs:1)
          • Actinotalea sp. (isolates:5; rSTs:3 tree)
          • Actinotalea subterranea (isolates:1; rSTs:1)
        • Cellulomonas (isolates:131; rSTs:97 tree)
          • Cellulomonas aerilata (isolates:2; rSTs:1)
          • Cellulomonas alba (isolates:1; rSTs:1)
          • Cellulomonas algicola (isolates:2; rSTs:2)
          • Cellulomonas avistercoris (isolates:1; rSTs:1)
          • Cellulomonas biazotea (isolates:1; rSTs:1)
          • Cellulomonas bogoriensis (isolates:1; rSTs:1)
          • Cellulomonas carbonis (isolates:2; rSTs:1)
          • Cellulomonas cellasea (isolates:3; rSTs:2)
          • Cellulomonas chengniuliangii (isolates:3; rSTs:2)
          • Cellulomonas chitinilytica (isolates:2; rSTs:1)
          • Cellulomonas citrea (isolates:1; rSTs:1)
          • Cellulomonas composti (isolates:2; rSTs:1)
          • Cellulomonas denverensis (isolates:3; rSTs:1)
          • Cellulomonas dongxiuzhuiae (isolates:3; rSTs:2)
          • Cellulomonas edaphi (isolates:1; rSTs:1)
          • Cellulomonas endometrii (isolates:1; rSTs:1)
          • Cellulomonas endophytica (isolates:1; rSTs:1)
          • Cellulomonas fengjieae (isolates:3; rSTs:2)
          • Cellulomonas fimi (isolates:4; rSTs:2)
          • Cellulomonas flavigena (isolates:2; rSTs:1)
          • Cellulomonas fulva (isolates:1; rSTs:1)
          • Cellulomonas gelida (isolates:2; rSTs:2)
          • Cellulomonas gilvus (isolates:1; rSTs:1)
          • Cellulomonas hominis (isolates:5; rSTs:3 tree)
          • Cellulomonas humilata (isolates:1; rSTs:1)
          • Cellulomonas iranensis (isolates:5; rSTs:3 tree)
          • Cellulomonas marina (isolates:2; rSTs:1)
          • Cellulomonas massiliensis (isolates:2; rSTs:1)
          • Cellulomonas oligotrophica (isolates:3; rSTs:1)
          • Cellulomonas pakistanensis (isolates:1; rSTs:1)
          • Cellulomonas palmilytica (isolates:1; rSTs:1)
          • Cellulomonas persica (isolates:2; rSTs:1)
          • Cellulomonas phragmiteti (isolates:1; rSTs:1)
          • Cellulomonas rhizosphaerae (isolates:1; rSTs:1)
          • Cellulomonas septica (isolates:1; rSTs:1)
          • Cellulomonas shaoxiangyii (isolates:2; rSTs:1)
          • Cellulomonas soli (isolates:3; rSTs:1)
          • Cellulomonas sp. (isolates:38; rSTs:36 tree)
          • Cellulomonas taurus (isolates:1; rSTs:1)
          • Cellulomonas telluris (isolates:1; rSTs:1)
          • Cellulomonas terrae (isolates:2; rSTs:1)
          • Cellulomonas timonensis (isolates:2; rSTs:1)
          • Cellulomonas triticagri (isolates:1; rSTs:1)
          • Cellulomonas uda (isolates:2; rSTs:1)
          • Cellulomonas wangleii (isolates:3; rSTs:2)
          • Cellulomonas wangsupingiae (isolates:3; rSTs:2)
          • Cellulomonas xiejunii (isolates:3; rSTs:2)
          • Cellulomonas xylanilytica (isolates:2; rSTs:1)
        • Oerskovia (isolates:19; rSTs:14 tree)
          • Oerskovia douganii (isolates:1; rSTs:1)
          • Oerskovia enterophila (isolates:3; rSTs:3 tree)
          • Oerskovia flava (isolates:1)
          • Oerskovia gallyi (isolates:1; rSTs:1)
          • Oerskovia jenensis (isolates:2; rSTs:1)
          • Oerskovia merdavium (isolates:1; rSTs:1)
          • Oerskovia paurometabola (isolates:2; rSTs:1)
          • Oerskovia rustica (isolates:1; rSTs:1)
          • Oerskovia sp. (isolates:4; rSTs:4 tree)
          • Oerskovia turbata (isolates:3; rSTs:1)
        • Paraoerskovia (isolates:2; rSTs:2)
          • Paraoerskovia marina (isolates:2; rSTs:2)
        • Pseudactinotalea (isolates:2; rSTs:2)
          • Pseudactinotalea suaedae (isolates:1; rSTs:1)
          • Pseudactinotalea terrae (isolates:1; rSTs:1)
        • Sediminihabitans (isolates:2; rSTs:1)
          • Sediminihabitans luteus (isolates:2; rSTs:1)
      • Demequinaceae (isolates:47; rSTs:40 tree)
        • Demequina (isolates:47; rSTs:40 tree)
          • Demequina activiva (isolates:1; rSTs:1)
          • Demequina aestuarii (isolates:1; rSTs:1)
          • Demequina aurantiaca (isolates:1; rSTs:1)
          • Demequina capsici (isolates:2; rSTs:2)
          • Demequina flava (isolates:1; rSTs:1)
          • Demequina gelatinilytica (isolates:1; rSTs:1)
          • Demequina globuliformis (isolates:1; rSTs:1)
          • Demequina iriomotensis (isolates:1; rSTs:1)
          • Demequina litorisediminis (isolates:1)
          • Demequina lutea (isolates:2; rSTs:1)
          • Demequina mangrovi (isolates:2; rSTs:1)
          • Demequina maris (isolates:3; rSTs:3 tree)
          • Demequina oxidasica (isolates:1; rSTs:1)
          • Demequina pelophila (isolates:1; rSTs:1)
          • Demequina phytophila (isolates:1; rSTs:1)
          • Demequina rhizosphaerae (isolates:3; rSTs:3 tree)
          • Demequina salsinemoris (isolates:1; rSTs:1)
          • Demequina sediminicola (isolates:1; rSTs:1)
          • Demequina sediminis (isolates:2; rSTs:1)
          • Demequina silvatica (isolates:1; rSTs:1)
          • Demequina soli (isolates:1; rSTs:1)
          • Demequina sp. (isolates:17; rSTs:14 tree)
          • Demequina subtropica (isolates:1; rSTs:1)
      • Dermabacteraceae (isolates:110; rSTs:93 tree)
        • Brachybacterium (isolates:78; rSTs:69 tree)
          • Brachybacterium alimentarium (isolates:9; rSTs:9 tree)
          • Brachybacterium aquaticum (isolates:1; rSTs:1)
          • Brachybacterium atlanticum (isolates:1; rSTs:1)
          • Brachybacterium avium (isolates:1; rSTs:1)
          • Brachybacterium endophyticum (isolates:1; rSTs:1)
          • Brachybacterium epidermidis (isolates:1; rSTs:1)
          • Brachybacterium equifaecis (isolates:1; rSTs:1)
          • Brachybacterium faecium (isolates:1; rSTs:1)
          • Brachybacterium fresconis (isolates:2; rSTs:1)
          • Brachybacterium ginsengisoli (isolates:1; rSTs:1)
          • Brachybacterium halotolerans (isolates:2; rSTs:2)
          • Brachybacterium huguangmaarense (isolates:1; rSTs:1)
          • Brachybacterium kimchii (isolates:1; rSTs:1)
          • Brachybacterium massiliense (isolates:1; rSTs:1)
          • Brachybacterium muris (isolates:9; rSTs:8 tree)
          • Brachybacterium nesterenkovii (isolates:2; rSTs:2)
          • Brachybacterium paraconglomeratum (isolates:8; rSTs:6 tree)
          • Brachybacterium phenoliresistens (isolates:2; rSTs:2)
          • Brachybacterium rhamnosum (isolates:1; rSTs:1)
          • Brachybacterium sacelli (isolates:2; rSTs:1)
          • Brachybacterium saurashtrense (isolates:2; rSTs:1)
          • Brachybacterium sillae (isolates:1; rSTs:1)
          • Brachybacterium sp. (isolates:21; rSTs:18 tree)
          • Brachybacterium squillarum (isolates:1; rSTs:1)
          • Brachybacterium subflavum (isolates:1; rSTs:1)
          • Brachybacterium timonense (isolates:1; rSTs:1)
          • Brachybacterium tyrofermentans (isolates:2; rSTs:2)
          • Brachybacterium vulturis (isolates:1; rSTs:1)
        • Dermabacter (isolates:24; rSTs:18 tree)
          • Dermabacter hominis (isolates:10; rSTs:5 tree)
          • Dermabacter indicis (isolates:1)
          • Dermabacter jinjuensis (isolates:3; rSTs:2)
          • Dermabacter sp. (isolates:6; rSTs:7 tree)
          • Dermabacter vaginalis (isolates:4; rSTs:4 tree)
        • Devriesea (isolates:1; rSTs:1)
          • Devriesea agamarum (isolates:1; rSTs:1)
        • Helcobacillus (isolates:7; rSTs:5 tree)
          • Helcobacillus massiliensis (isolates:6; rSTs:4 tree)
          • Helcobacillus sp. (isolates:1; rSTs:1)
      • Dermacoccaceae (isolates:51; rSTs:45 tree)
        • Allobranchiibius (isolates:4; rSTs:4 tree)
          • Allobranchiibius huperziae (isolates:1; rSTs:1)
          • Allobranchiibius sp. (isolates:3; rSTs:3 tree)
        • Barrientosiimonas (isolates:2; rSTs:1)
          • Barrientosiimonas humi (isolates:2; rSTs:1)
        • Branchiibius (isolates:2; rSTs:2)
          • Branchiibius hedensis (isolates:1; rSTs:1)
          • Branchiibius sp. (isolates:1; rSTs:1)
        • Calidifontibacter (isolates:1; rSTs:1)
          • Calidifontibacter indicus (isolates:1; rSTs:1)
        • Demetria (isolates:1; rSTs:1)
          • Demetria terragena (isolates:1; rSTs:1)
        • Dermacoccus (isolates:24; rSTs:22 tree)
          • Dermacoccus abyssi (isolates:1; rSTs:1)
          • Dermacoccus barathri (isolates:1; rSTs:1)
          • Dermacoccus nishinomiyaensis (isolates:14; rSTs:11 tree)
          • Dermacoccus sp. (isolates:8; rSTs:9 tree)
        • Flexivirga (isolates:6; rSTs:5 tree)
          • Flexivirga aerilata (isolates:1; rSTs:1)
          • Flexivirga caeni (isolates:1; rSTs:1)
          • Flexivirga endophytica (isolates:2; rSTs:1)
          • Flexivirga meconopsidis (isolates:1; rSTs:1)
          • Flexivirga oryzae (isolates:1; rSTs:1)
        • Leekyejoonella (isolates:1; rSTs:1)
          • Leekyejoonella antrihumi (isolates:1; rSTs:1)
        • Luteipulveratus (isolates:4; rSTs:3 tree)
          • Luteipulveratus halotolerans (isolates:1; rSTs:1)
          • Luteipulveratus mongoliensis (isolates:1; rSTs:1)
          • Luteipulveratus sp. (isolates:2; rSTs:1)
        • Metallococcus (isolates:1; rSTs:1)
          • Metallococcus carri (isolates:1; rSTs:1)
        • Rudaeicoccus (isolates:1; rSTs:1)
          • Rudaeicoccus suwonensis (isolates:1; rSTs:1)
        • Yimella (isolates:4; rSTs:3 tree)
          • Yimella lutea (isolates:2; rSTs:1)
          • Yimella sp. (isolates:2; rSTs:2)
      • Dermatophilaceae (isolates:56; rSTs:17 tree)
        • Agilicoccus (isolates:1; rSTs:1)
          • Agilicoccus flavus (isolates:1; rSTs:1)
        • Austwickia (isolates:4; rSTs:3 tree)
          • Austwickia chelonae (isolates:3; rSTs:2)
          • Austwickia sp. (isolates:1; rSTs:1)
        • Dermatophilus (isolates:44; rSTs:8 tree)
          • Dermatophilus congolensis (isolates:44; rSTs:8 tree)
        • Gephyromycinifex (isolates:1; rSTs:1)
          • Gephyromycinifex aptenodytis (isolates:1; rSTs:1)
        • Kineosphaera (isolates:2; rSTs:1)
          • Kineosphaera limosa (isolates:2; rSTs:1)
        • Mobilicoccus (isolates:3; rSTs:2)
          • Mobilicoccus massiliensis (isolates:2; rSTs:1)
          • Mobilicoccus pelagius (isolates:1; rSTs:1)
        • Piscicoccus (isolates:1; rSTs:1)
          • Piscicoccus intestinalis (isolates:1; rSTs:1)
      • Intrasporangiaceae (isolates:148; rSTs:113 tree)
        • Aquipuribacter (isolates:3)
          • Aquipuribacter hungaricus (isolates:1)
          • Aquipuribacter nitratireducens (isolates:1)
          • Aquipuribacter sp. (isolates:1)
        • Arsenicicoccus (isolates:7; rSTs:7 tree)
          • Arsenicicoccus bolidensis (isolates:2; rSTs:2)
          • Arsenicicoccus cauae (isolates:1; rSTs:1)
          • Arsenicicoccus dermatophilus (isolates:1; rSTs:1)
          • Arsenicicoccus piscis (isolates:2; rSTs:2)
          • Arsenicicoccus sp. (isolates:1; rSTs:1)
        • Fodinibacter (isolates:1; rSTs:1)
          • Fodinibacter luteus (isolates:1; rSTs:1)
        • Humibacillus (isolates:3; rSTs:2)
          • Humibacillus xanthopallidus (isolates:3; rSTs:2)
        • Intrasporangium (isolates:9; rSTs:7 tree)
          • Intrasporangium calvum (isolates:4; rSTs:2)
          • Intrasporangium chromatireducens (isolates:1; rSTs:1)
          • Intrasporangium flavum (isolates:1; rSTs:1)
          • Intrasporangium oryzae (isolates:1; rSTs:1)
          • Intrasporangium sp. (isolates:2; rSTs:2)
        • Janibacter (isolates:49; rSTs:34 tree)
          • Janibacter alkaliphilus (isolates:1; rSTs:1)
          • Janibacter anophelis (isolates:2; rSTs:2)
          • Janibacter corallicola (isolates:1; rSTs:1)
          • Janibacter cremeus (isolates:1; rSTs:1)
          • Janibacter endophyticus (isolates:1; rSTs:1)
          • Janibacter hoylei (isolates:6; rSTs:3 tree)
          • Janibacter indicus (isolates:3; rSTs:3 tree)
          • Janibacter limosus (isolates:3; rSTs:2)
          • Janibacter massiliensis (isolates:1; rSTs:1)
          • Janibacter melonis (isolates:18; rSTs:7 tree)
          • Janibacter sp. (isolates:8; rSTs:8 tree)
          • Janibacter terrae (isolates:4; rSTs:4 tree)
        • Knoellia (isolates:11; rSTs:9 tree)
          • Knoellia aerolata (isolates:1; rSTs:1)
          • Knoellia flava (isolates:2; rSTs:1)
          • Knoellia koreensis (isolates:1; rSTs:1)
          • Knoellia locipacati (isolates:2; rSTs:1)
          • Knoellia remsis (isolates:1; rSTs:1)
          • Knoellia sinensis (isolates:1; rSTs:1)
          • Knoellia sp. (isolates:2; rSTs:2)
          • Knoellia subterranea (isolates:1; rSTs:1)
        • Kribbia (isolates:1; rSTs:1)
          • Kribbia dieselivorans (isolates:1; rSTs:1)
        • Lapillicoccus (isolates:2; rSTs:1)
          • Lapillicoccus jejuensis (isolates:2; rSTs:1)
        • Marihabitans (isolates:2; rSTs:1)
          • Marihabitans asiaticum (isolates:2; rSTs:1)
        • Nostocoides (isolates:5; rSTs:3 tree)
          • Nostocoides australiense (isolates:1)
          • Nostocoides japonicum (isolates:1; rSTs:1)
          • Nostocoides jenkinsii (isolates:1; rSTs:1)
          • Nostocoides vanveenii (isolates:1)
          • Nostocoides veronense (isolates:1; rSTs:1)
        • Ornithinibacter (isolates:2; rSTs:1)
          • Ornithinibacter aureus (isolates:2; rSTs:1)
        • Ornithinicoccus (isolates:4; rSTs:2)
          • Ornithinicoccus halotolerans (isolates:1; rSTs:1)
          • Ornithinicoccus hortensis (isolates:3; rSTs:1)
        • Oryzihumus (isolates:2; rSTs:1)
          • Oryzihumus leptocrescens (isolates:2; rSTs:1)
        • Pedococcus (isolates:7; rSTs:7 tree)
          • Pedococcus aerophilus (isolates:1; rSTs:1)
          • Pedococcus badiiscoriae (isolates:1; rSTs:1)
          • Pedococcus bigeumensis (isolates:1; rSTs:1)
          • Pedococcus cremeus (isolates:1; rSTs:1)
          • Pedococcus dokdonensis (isolates:1; rSTs:1)
          • Pedococcus ginsenosidimutans (isolates:1; rSTs:1)
          • Pedococcus sp. (isolates:1; rSTs:1)
        • Phycicoccus (isolates:14; rSTs:12 tree)
          • Phycicoccus avicenniae (isolates:1; rSTs:1)
          • Phycicoccus duodecadis (isolates:1; rSTs:1)
          • Phycicoccus elongatus (isolates:1; rSTs:1)
          • Phycicoccus endophyticus (isolates:3; rSTs:1)
          • Phycicoccus flavus (isolates:1; rSTs:1)
          • Phycicoccus jejuensis (isolates:1; rSTs:1)
          • Phycicoccus mangrovi (isolates:2; rSTs:2)
          • Phycicoccus sonneratiae (isolates:1; rSTs:1)
          • Phycicoccus sp. (isolates:3; rSTs:3 tree)
        • Segeticoccus (isolates:1; rSTs:1)
          • Segeticoccus rhizosphaerae (isolates:1; rSTs:1)
        • Terrabacter (isolates:22; rSTs:21 tree)
          • Terrabacter aeriphilus (isolates:1; rSTs:1)
          • Terrabacter aerolatus (isolates:2; rSTs:1)
          • Terrabacter carboxydivorans (isolates:1; rSTs:1)
          • Terrabacter ginsenosidimutans (isolates:1; rSTs:1)
          • Terrabacter lapilli (isolates:2; rSTs:2)
          • Terrabacter sp. (isolates:13; rSTs:13 tree)
          • Terrabacter terrae (isolates:1; rSTs:1)
          • Terrabacter tumescens (isolates:1; rSTs:1)
        • Terracoccus (isolates:3; rSTs:2)
          • Terracoccus luteus (isolates:3; rSTs:2)
      • Jonesiaceae (isolates:9; rSTs:5 tree)
        • Flavimobilis (isolates:4; rSTs:3 tree)
          • Flavimobilis marinus (isolates:2; rSTs:1)
          • Flavimobilis rhizosphaerae (isolates:1; rSTs:1)
          • Flavimobilis soli (isolates:1; rSTs:1)
        • Jonesia (isolates:5; rSTs:2)
          • Jonesia denitrificans (isolates:4; rSTs:1)
          • Jonesia quinghaiensis (isolates:1; rSTs:1)
      • Kytococcaceae (isolates:9; rSTs:6 tree)
        • Kytococcus (isolates:9; rSTs:6 tree)
          • Kytococcus aerolatus (isolates:1; rSTs:1)
          • Kytococcus schroeteri (isolates:2; rSTs:2)
          • Kytococcus sedentarius (isolates:4; rSTs:2)
          • Kytococcus sp. (isolates:2; rSTs:1)
      • Microbacteriaceae (isolates:2079; rSTs:1612)
        • Agreia (isolates:11; rSTs:11 tree)
          • Agreia bicolorata (isolates:2; rSTs:2)
          • Agreia pratensis (isolates:2; rSTs:2)
          • Agreia sp. (isolates:7; rSTs:7 tree)
        • Agrococcus (isolates:25; rSTs:26 tree)
          • Agrococcus beijingensis (isolates:1; rSTs:1)
          • Agrococcus carbonis (isolates:1; rSTs:1)
          • Agrococcus casei (isolates:1; rSTs:1)
          • Agrococcus citreus (isolates:1; rSTs:1)
          • Agrococcus jejuensis (isolates:2; rSTs:2)
          • Agrococcus jenensis (isolates:1; rSTs:1)
          • Agrococcus lahaulensis (isolates:1; rSTs:1)
          • Agrococcus pavilionensis (isolates:1; rSTs:1)
          • Agrococcus sediminis (isolates:2; rSTs:2)
          • Agrococcus sp. (isolates:12; rSTs:13 tree)
          • Agrococcus terreus (isolates:1; rSTs:1)
          • Agrococcus versicolor (isolates:1; rSTs:1)
        • Agromyces (isolates:97; rSTs:78 tree)
          • Agromyces agglutinans (isolates:1; rSTs:1)
          • Agromyces albus (isolates:2; rSTs:2)
          • Agromyces allii (isolates:2; rSTs:1)
          • Agromyces archimandritae (isolates:1; rSTs:1)
          • Agromyces atrinae (isolates:3; rSTs:2)
          • Agromyces aurantiacus (isolates:1; rSTs:1)
          • Agromyces aureus (isolates:2; rSTs:1)
          • Agromyces badenianii (isolates:2; rSTs:2)
          • Agromyces bauzanensis (isolates:2; rSTs:2)
          • Agromyces binzhouensis (isolates:1; rSTs:1)
          • Agromyces bracchium (isolates:2; rSTs:1)
          • Agromyces cavernae (isolates:1; rSTs:1)
          • Agromyces cerinus (isolates:1; rSTs:1)
          • Agromyces chromiiresistens (isolates:1; rSTs:1)
          • Agromyces flavus (isolates:3; rSTs:1)
          • Agromyces fucosus (isolates:1; rSTs:1)
          • Agromyces hippuratus (isolates:1; rSTs:1)
          • Agromyces humatus (isolates:2; rSTs:1)
          • Agromyces humi (isolates:1; rSTs:1)
          • Agromyces indicus (isolates:2; rSTs:1)
          • Agromyces intestinalis (isolates:1; rSTs:1)
          • Agromyces italicus (isolates:2; rSTs:2)
          • Agromyces kandeliae (isolates:1; rSTs:1)
          • Agromyces laixinhei (isolates:3; rSTs:3 tree)
          • Agromyces lapidis (isolates:2; rSTs:1)
          • Agromyces larvae (isolates:1; rSTs:1)
          • Agromyces luteolus (isolates:3; rSTs:1)
          • Agromyces mangrovi (isolates:1; rSTs:1)
          • Agromyces mariniharenae (isolates:1; rSTs:1)
          • Agromyces marinus (isolates:2; rSTs:1)
          • Agromyces mediolanus (isolates:3; rSTs:2 tree)
          • Agromyces neolithicus (isolates:1; rSTs:1)
          • Agromyces protaetiae (isolates:1; rSTs:1)
          • Agromyces ramosus (isolates:1; rSTs:1)
          • Agromyces rhizosphaerae (isolates:1; rSTs:1)
          • Agromyces salentinus (isolates:2; rSTs:1)
          • Agromyces seonyuensis (isolates:1; rSTs:1)
          • Agromyces soli (isolates:2; rSTs:1)
          • Agromyces sp. (isolates:30; rSTs:28 tree)
          • Agromyces subbeticus (isolates:1; rSTs:1)
          • Agromyces tardus (isolates:1; rSTs:1)
          • Agromyces terreus (isolates:3; rSTs:1)
          • Agromyces tropicus (isolates:1; rSTs:1)
        • Alpinimonas (isolates:1; rSTs:1)
          • Alpinimonas psychrophila (isolates:1; rSTs:1)
        • Amnibacterium (isolates:6; rSTs:4 tree)
          • Amnibacterium flavum (isolates:1; rSTs:1)
          • Amnibacterium kyonggiense (isolates:2; rSTs:1)
          • Amnibacterium setariae (isolates:1; rSTs:1)
          • Amnibacterium soli (isolates:1)
          • Amnibacterium sp. (isolates:1; rSTs:1)
        • Antiquaquibacter (isolates:1; rSTs:1)
          • Antiquaquibacter oligotrophicus (isolates:1; rSTs:1)
        • Aquiluna (isolates:3; rSTs:3 tree)
          • Aquiluna borgnonia (isolates:1; rSTs:1)
          • Aquiluna sp. (isolates:1; rSTs:1)
          • Candidatus Aquiluna sp. (isolates:1; rSTs:1)
        • Arenivirga (isolates:1)
          • Arenivirga flava (isolates:1)
        • Aurantimicrobium (isolates:5; rSTs:5 tree)
          • Aurantimicrobium minutum (isolates:2; rSTs:2)
          • Aurantimicrobium photophilum (isolates:1; rSTs:1)
          • Aurantimicrobium sp. (isolates:2; rSTs:2)
        • Candidatus Lumbricidophila (isolates:1; rSTs:1)
          • Candidatus Lumbricidophila eiseniae (isolates:1; rSTs:1)
        • Canibacter (isolates:5; rSTs:5 tree)
          • Canibacter oris (isolates:1; rSTs:1)
          • Canibacter zhoujuaniae (isolates:2; rSTs:2)
          • Canibacter zhuwentaonis (isolates:2; rSTs:2)
        • Clavibacter (isolates:182; rSTs:104 tree)
          • Clavibacter californiensis (isolates:2; rSTs:1)
          • Clavibacter capsici (isolates:5; rSTs:5 tree)
          • Clavibacter lycopersici (isolates:2; rSTs:1)
          • Clavibacter michiganensis (isolates:141; rSTs:69 tree)
          • Clavibacter nebraskensis (isolates:12; rSTs:5 tree)
          • Clavibacter phaseoli (isolates:6; rSTs:4 tree)
          • Clavibacter sepedonicus (isolates:4; rSTs:1)
          • Clavibacter sp. (isolates:8; rSTs:17 tree)
          • Clavibacter zhangzhiyongii (isolates:2; rSTs:1)
        • Cnuibacter (isolates:3; rSTs:2)
          • Cnuibacter physcomitrellae (isolates:3; rSTs:2)
        • Compostimonas (isolates:1; rSTs:1)
          • Compostimonas suwonensis (isolates:1; rSTs:1)
        • Conyzicola (isolates:3; rSTs:3 tree)
          • Conyzicola lurida (isolates:1; rSTs:1)
          • Conyzicola nivalis (isolates:2; rSTs:2)
        • Cryobacterium (isolates:130; rSTs:111 tree)
          • Cryobacterium adonitolivorans (isolates:1; rSTs:1)
          • Cryobacterium algoricola (isolates:1; rSTs:1)
          • Cryobacterium algoritolerans (isolates:1; rSTs:1)
          • Cryobacterium arcticum (isolates:1; rSTs:1)
          • Cryobacterium aureum (isolates:1; rSTs:1)
          • Cryobacterium breve (isolates:1; rSTs:1)
          • Cryobacterium cheniae (isolates:1; rSTs:1)
          • Cryobacterium cryoconiti (isolates:1; rSTs:1)
          • Cryobacterium flavum (isolates:2; rSTs:1)
          • Cryobacterium frigoriphilum (isolates:1; rSTs:1)
          • Cryobacterium fucosi (isolates:1; rSTs:1)
          • Cryobacterium gelidum (isolates:1; rSTs:1)
          • Cryobacterium glaciale (isolates:1; rSTs:1)
          • Cryobacterium glucosi (isolates:1; rSTs:1)
          • Cryobacterium lactosi (isolates:1; rSTs:1)
          • Cryobacterium levicorallinum (isolates:3; rSTs:1)
          • Cryobacterium luteum (isolates:2; rSTs:1)
          • Cryobacterium lyxosi (isolates:1; rSTs:1)
          • Cryobacterium mannosilyticum (isolates:1; rSTs:1)
          • Cryobacterium melibiosiphilum (isolates:1; rSTs:1)
          • Cryobacterium psychrophilum (isolates:2; rSTs:1)
          • Cryobacterium psychrotolerans (isolates:2; rSTs:1)
          • Cryobacterium roopkundense (isolates:2; rSTs:1)
          • Cryobacterium ruanii (isolates:1; rSTs:1)
          • Cryobacterium sandaracinum (isolates:1; rSTs:1)
          • Cryobacterium serini (isolates:1; rSTs:1)
          • Cryobacterium shii (isolates:1; rSTs:1)
          • Cryobacterium sinapicolor (isolates:1; rSTs:1)
          • Cryobacterium soli (isolates:1; rSTs:1)
          • Cryobacterium sp. (isolates:87; rSTs:75 tree)
          • Cryobacterium suzukii (isolates:1; rSTs:1)
          • Cryobacterium tagatosivorans (isolates:1; rSTs:1)
          • Cryobacterium tepidiphilum (isolates:1; rSTs:1)
          • Cryobacterium zhongshanensis (isolates:1; rSTs:1)
          • Cryobacterium zongtaii (isolates:3; rSTs:3 tree)
        • Curtobacterium (isolates:270; rSTs:229 tree)
          • Curtobacterium albidum (isolates:2; rSTs:1)
          • Curtobacterium ammoniigenes (isolates:1; rSTs:1)
          • Curtobacterium caseinilyticum (isolates:1; rSTs:1)
          • Curtobacterium citreum (isolates:3; rSTs:2)
          • Curtobacterium citri (isolates:1; rSTs:1)
          • Curtobacterium flaccumfaciens (isolates:67; rSTs:32 tree)
          • Curtobacterium herbarum (isolates:5; rSTs:3 tree)
          • Curtobacterium luteum (isolates:4; rSTs:5 tree)
          • Curtobacterium oceanosedimentum (isolates:2; rSTs:1)
          • Curtobacterium poinsettiae (isolates:7; rSTs:5 tree)
          • Curtobacterium pusillum (isolates:7; rSTs:5 tree)
          • Curtobacterium salicis (isolates:1; rSTs:1)
          • Curtobacterium sp. (isolates:168; rSTs:170 tree)
          • Curtobacterium subtropicum (isolates:1; rSTs:1)
        • Diaminobutyricibacter (isolates:2; rSTs:2)
          • Diaminobutyricibacter sp. (isolates:1; rSTs:1)
          • Diaminobutyricibacter tongyongensis (isolates:1; rSTs:1)
        • Diaminobutyricimonas (isolates:1; rSTs:1)
          • Diaminobutyricimonas aerilata (isolates:1; rSTs:1)
        • Frigoribacterium (isolates:46; rSTs:35 tree)
          • Frigoribacterium endophyticum (isolates:1; rSTs:1)
          • Frigoribacterium faeni (isolates:5; rSTs:3 tree)
          • Frigoribacterium sp. (isolates:40; rSTs:31 tree)
        • Frondihabitans (isolates:11; rSTs:8 tree)
          • Frondihabitans australicus (isolates:1; rSTs:1)
          • Frondihabitans cladoniiphilus (isolates:1; rSTs:1)
          • Frondihabitans peucedani (isolates:1; rSTs:1)
          • Frondihabitans sp. (isolates:7; rSTs:4 tree)
          • Frondihabitans sucicola (isolates:1; rSTs:1)
        • Galbitalea (isolates:2; rSTs:1)
          • Galbitalea soli (isolates:2; rSTs:1)
        • Glaciibacter (isolates:2; rSTs:2)
          • Glaciibacter flavus (isolates:1; rSTs:1)
          • Glaciibacter superstes (isolates:1; rSTs:1)
        • Glaciihabitans (isolates:2; rSTs:2)
          • Glaciihabitans arcticus (isolates:1; rSTs:1)
          • Glaciihabitans tibetensis (isolates:1; rSTs:1)
        • Gryllotalpicola (isolates:5; rSTs:5 tree)
          • Gryllotalpicola daejeonensis (isolates:1; rSTs:1)
          • Gryllotalpicola ginsengisoli (isolates:1; rSTs:1)
          • Gryllotalpicola koreensis (isolates:1; rSTs:1)
          • Gryllotalpicola kribbensis (isolates:1; rSTs:1)
          • Gryllotalpicola protaetiae (isolates:1; rSTs:1)
        • Gulosibacter (isolates:17; rSTs:14 tree)
          • Gulosibacter bifidus (isolates:1; rSTs:1)
          • Gulosibacter chungangensis (isolates:1; rSTs:1)
          • Gulosibacter faecalis (isolates:1; rSTs:1)
          • Gulosibacter hominis (isolates:3; rSTs:3 tree)
          • Gulosibacter macacae (isolates:1; rSTs:1)
          • Gulosibacter massiliensis (isolates:1; rSTs:1)
          • Gulosibacter molinativorax (isolates:3; rSTs:1)
          • Gulosibacter sediminis (isolates:4; rSTs:4 tree)
          • Gulosibacter sp. (isolates:2; rSTs:1)
        • Herbiconiux (isolates:15; rSTs:11 tree)
          • Herbiconiux aconitum (isolates:1; rSTs:1)
          • Herbiconiux daphne (isolates:1; rSTs:1)
          • Herbiconiux flava (isolates:2; rSTs:1)
          • Herbiconiux gentiana (isolates:2; rSTs:1)
          • Herbiconiux ginsengi (isolates:1; rSTs:1)
          • Herbiconiux moechotypicola (isolates:2; rSTs:1)
          • Herbiconiux oxytropis (isolates:2; rSTs:1)
          • Herbiconiux solani (isolates:1; rSTs:1)
          • Herbiconiux sp. (isolates:3; rSTs:3 tree)
        • Homoserinibacter (isolates:1; rSTs:1)
          • Homoserinibacter sp. (isolates:1; rSTs:1)
        • Homoserinimonas (isolates:1; rSTs:1)
          • Homoserinimonas aerilata (isolates:1; rSTs:1)
        • Humibacter (isolates:3; rSTs:3 tree)
          • Humibacter albus (isolates:1; rSTs:1)
          • Humibacter ginsenosidimutans (isolates:1; rSTs:1)
          • Humibacter sp. (isolates:1; rSTs:1)
        • Klugiella (isolates:2; rSTs:1)
          • Klugiella xanthotipulae (isolates:2; rSTs:1)
        • Labedella (isolates:4; rSTs:4 tree)
          • Labedella endophytica (isolates:1; rSTs:1)
          • Labedella gwakjiensis (isolates:1; rSTs:1)
          • Labedella phragmitis (isolates:1; rSTs:1)
          • Labedella populi (isolates:1; rSTs:1)
        • Lacisediminihabitans (isolates:2; rSTs:2)
          • Lacisediminihabitans changchengi (isolates:1; rSTs:1)
          • Lacisediminihabitans profunda (isolates:1; rSTs:1)
        • Leifsonia (isolates:57; rSTs:46 tree)
          • Leifsonia aquatica (isolates:2; rSTs:1)
          • Leifsonia flava (isolates:1; rSTs:1)
          • Leifsonia kafniensis (isolates:1; rSTs:1)
          • Leifsonia naganoensis (isolates:2; rSTs:1)
          • Leifsonia poae (isolates:1; rSTs:1)
          • Leifsonia psychrotolerans (isolates:1; rSTs:1)
          • Leifsonia shinshuensis (isolates:4; rSTs:3 tree)
          • Leifsonia soli (isolates:2; rSTs:1)
          • Leifsonia sp. (isolates:36; rSTs:31 tree)
          • Leifsonia virtsii (isolates:1; rSTs:1)
          • Leifsonia williamsii (isolates:2; rSTs:1)
          • Leifsonia xyli (isolates:4; rSTs:3 tree)
        • Leucobacter (isolates:92; rSTs:63 tree)
          • Leucobacter albus (isolates:1; rSTs:1)
          • Leucobacter allii (isolates:2; rSTs:2)
          • Leucobacter aridicollis (isolates:5; rSTs:3 tree)
          • Leucobacter celer (isolates:1; rSTs:1)
          • Leucobacter chinensis (isolates:1; rSTs:1)
          • Leucobacter chironomi (isolates:1; rSTs:1)
          • Leucobacter chromiireducens (isolates:5; rSTs:3 tree)
          • Leucobacter chromiiresistens (isolates:3; rSTs:1)
          • Leucobacter chromiisoli (isolates:1; rSTs:1)
          • Leucobacter coleopterorum (isolates:1; rSTs:1)
          • Leucobacter denitrificans (isolates:1; rSTs:1)
          • Leucobacter edaphi (isolates:1; rSTs:1)
          • Leucobacter exalbidus (isolates:1; rSTs:1)
          • Leucobacter iarius (isolates:1; rSTs:1)
          • Leucobacter insecticola (isolates:1; rSTs:1)
          • Leucobacter japonicus (isolates:1; rSTs:1)
          • Leucobacter komagatae (isolates:2; rSTs:1)
          • Leucobacter luti (isolates:6; rSTs:4 tree)
          • Leucobacter manosquensis (isolates:1; rSTs:1)
          • Leucobacter massiliensis (isolates:1; rSTs:1)
          • Leucobacter muris (isolates:1; rSTs:1)
          • Leucobacter musarum (isolates:1; rSTs:1)
          • Leucobacter rhizosphaerae (isolates:1; rSTs:1)
          • Leucobacter ruminantium (isolates:1; rSTs:1)
          • Leucobacter salsicius (isolates:1; rSTs:1)
          • Leucobacter soli (isolates:1; rSTs:1)
          • Leucobacter sp. (isolates:42; rSTs:23 tree)
          • Leucobacter tardus (isolates:2; rSTs:1)
          • Leucobacter tenebrionis (isolates:1; rSTs:1)
          • Leucobacter triazinivorans (isolates:1; rSTs:1)
          • Leucobacter viscericola (isolates:1; rSTs:1)
          • Leucobacter weissii (isolates:1; rSTs:1)
          • Leucobacter zeae (isolates:1; rSTs:1)
        • Lysinibacter (isolates:1; rSTs:1)
          • Lysinibacter cavernae (isolates:1; rSTs:1)
        • Marisediminicola (isolates:3; rSTs:3 tree)
          • Marisediminicola antarctica (isolates:1; rSTs:1)
          • Marisediminicola senii (isolates:1; rSTs:1)
          • Marisediminicola sp. (isolates:1; rSTs:1)
        • Microbacterium (isolates:699; rSTs:552 tree)
          • Microbacterium abyssi (isolates:1; rSTs:1)
          • Microbacterium aerolatum (isolates:3; rSTs:2)
          • Microbacterium album (isolates:1; rSTs:1)
          • Microbacterium algeriense (isolates:17; rSTs:3 tree)
          • Microbacterium algihabitans (isolates:1; rSTs:1)
          • Microbacterium allomyrinae (isolates:1; rSTs:1)
          • Microbacterium amylolyticum (isolates:2; rSTs:1)
          • Microbacterium aoyamense (isolates:2; rSTs:1)
          • Microbacterium aquilitoris (isolates:2; rSTs:2)
          • Microbacterium aquimaris (isolates:3; rSTs:2)
          • Microbacterium arabinogalactanolyticum (isolates:1; rSTs:1)
          • Microbacterium arborescens (isolates:2; rSTs:2)
          • Microbacterium arthrosphaerae (isolates:1; rSTs:1)
          • Microbacterium atlanticum (isolates:1; rSTs:1)
          • Microbacterium aurantiacum (isolates:1; rSTs:1)
          • Microbacterium aurugineum (isolates:3; rSTs:3 tree)
          • Microbacterium aurum (isolates:3; rSTs:2)
          • Microbacterium awajiense (isolates:1; rSTs:1)
          • Microbacterium azadirachtae (isolates:7; rSTs:5 tree)
          • Microbacterium barkeri (isolates:1; rSTs:1)
          • Microbacterium binotii (isolates:2; rSTs:2)
          • Microbacterium bovistercoris (isolates:1; rSTs:1)
          • Microbacterium caowuchunii (isolates:2; rSTs:1)
          • Microbacterium chocolatum (isolates:5; rSTs:4 tree)
          • Microbacterium commune (isolates:1; rSTs:1)
          • Microbacterium cremeum (isolates:1; rSTs:1)
          • Microbacterium croceum (isolates:1; rSTs:1)
          • Microbacterium dauci (isolates:1; rSTs:1)
          • Microbacterium deminutum (isolates:1; rSTs:1)
          • Microbacterium dextranolyticum (isolates:3; rSTs:1)
          • Microbacterium elymi (isolates:1)
          • Microbacterium enclense (isolates:4; rSTs:3 tree)
          • Microbacterium endophyticum (isolates:3; rSTs:1)
          • Microbacterium esteraromaticum (isolates:3; rSTs:2)
          • Microbacterium excoecariae (isolates:1; rSTs:1)
          • Microbacterium faecale (isolates:1; rSTs:1)
          • Microbacterium festucae (isolates:1; rSTs:1)
          • Microbacterium flavescens (isolates:1; rSTs:1)
          • Microbacterium flavum (isolates:2; rSTs:2)
          • Microbacterium fluvii (isolates:2; rSTs:1)
          • Microbacterium foliorum (isolates:5; rSTs:3 tree)
          • Microbacterium forte (isolates:1; rSTs:1)
          • Microbacterium galbinum (isolates:3; rSTs:3 tree)
          • Microbacterium galbum (isolates:1; rSTs:1)
          • Microbacterium gallinarum (isolates:1; rSTs:1)
          • Microbacterium gawkjiense (isolates:1; rSTs:1)
          • Microbacterium gilvum (isolates:1; rSTs:1)
          • Microbacterium ginsengisoli (isolates:1; rSTs:1)
          • Microbacterium ginsengiterrae (isolates:3; rSTs:1)
          • Microbacterium gorillae (isolates:1; rSTs:1)
          • Microbacterium gubbeenense (isolates:1; rSTs:1)
          • Microbacterium halimionae (isolates:2; rSTs:1)
          • Microbacterium halophytorum (isolates:2; rSTs:1)
          • Microbacterium halotolerans (isolates:1; rSTs:1)
          • Microbacterium hatanonis (isolates:2; rSTs:1)
          • Microbacterium helvum (isolates:1; rSTs:1)
          • Microbacterium hibisci (isolates:1; rSTs:1)
          • Microbacterium hominis (isolates:6; rSTs:4 tree)
          • Microbacterium horticulturae (isolates:1; rSTs:1)
          • Microbacterium hydrocarbonoxydans (isolates:2; rSTs:1)
          • Microbacterium hydrothermale (isolates:2; rSTs:2)
          • Microbacterium ihumii (isolates:1; rSTs:1)
          • Microbacterium immunditiarum (isolates:1; rSTs:1)
          • Microbacterium imperiale (isolates:3; rSTs:1)
          • Microbacterium indicum (isolates:1; rSTs:1)
          • Microbacterium insulae (isolates:1; rSTs:1)
          • Microbacterium invictum (isolates:3; rSTs:1)
          • Microbacterium jejuense (isolates:1; rSTs:1)
          • Microbacterium keratanolyticum (isolates:3; rSTs:1)
          • Microbacterium kribbense (isolates:1; rSTs:1)
          • Microbacterium kunmingense (isolates:1; rSTs:1)
          • Microbacterium kyungheense (isolates:2; rSTs:1)
          • Microbacterium lacticum (isolates:5; rSTs:2)
          • Microbacterium lacus (isolates:1; rSTs:1)
          • Microbacterium laevaniformans (isolates:6; rSTs:4 tree)
          • Microbacterium lemovicicum (isolates:1; rSTs:1)
          • Microbacterium limosum (isolates:1; rSTs:1)
          • Microbacterium liquefaciens (isolates:10; rSTs:8 tree)
          • Microbacterium lushaniae (isolates:2; rSTs:1)
          • Microbacterium luteolum (isolates:2; rSTs:1)
          • Microbacterium luteum (isolates:1; rSTs:1)
          • Microbacterium luticocti (isolates:1; rSTs:1)
          • Microbacterium mangrovi (isolates:1; rSTs:1)
          • Microbacterium marinilacus (isolates:2; rSTs:1)
          • Microbacterium marinum (isolates:1; rSTs:1)
          • Microbacterium memoriense (isolates:1; rSTs:1)
          • Microbacterium mitrae (isolates:2; rSTs:1)
          • Microbacterium murale (isolates:1; rSTs:1)
          • Microbacterium nanhaiense (isolates:1; rSTs:1)
          • Microbacterium natoriense (isolates:2; rSTs:2)
          • Microbacterium neungamense (isolates:1; rSTs:1)
          • Microbacterium nymphoidis (isolates:1; rSTs:1)
          • Microbacterium oleivorans (isolates:4; rSTs:4 tree)
          • Microbacterium oryzae (isolates:3; rSTs:2)
          • Microbacterium oxydans (isolates:15; rSTs:5 tree)
          • Microbacterium paludicola (isolates:2; rSTs:2)
          • Microbacterium panaciterrae (isolates:1; rSTs:1)
          • Microbacterium paraoxydans (isolates:14; rSTs:11 tree)
          • Microbacterium paulum (isolates:1; rSTs:1)
          • Microbacterium phycohabitans (isolates:1; rSTs:1)
          • Microbacterium phyllosphaerae (isolates:4; rSTs:2)
          • Microbacterium plantarum (isolates:2; rSTs:2)
          • Microbacterium profundi (isolates:3; rSTs:3 tree)
          • Microbacterium protaetiae (isolates:1; rSTs:1)
          • Microbacterium proteolyticum (isolates:2; rSTs:2)
          • Microbacterium pseudoresistens (isolates:2; rSTs:1)
          • Microbacterium psychrotolerans (isolates:1; rSTs:1)
          • Microbacterium pullorum (isolates:1; rSTs:1)
          • Microbacterium pumilum (isolates:1; rSTs:1)
          • Microbacterium pygmaeum (isolates:1; rSTs:1)
          • Microbacterium radiodurans (isolates:1; rSTs:1)
          • Microbacterium resistens (isolates:3; rSTs:3 tree)
          • Microbacterium rhizomatis (isolates:1; rSTs:1)
          • Microbacterium rhizosphaerae (isolates:3; rSTs:1)
          • Microbacterium saccharophilum (isolates:4; rSTs:2)
          • Microbacterium salsuginis (isolates:1; rSTs:1)
          • Microbacterium saperdae (isolates:2; rSTs:1)
          • Microbacterium schleiferi (isolates:5; rSTs:3 tree)
          • Microbacterium sediminicola (isolates:1; rSTs:1)
          • Microbacterium sediminis (isolates:3; rSTs:2)
          • Microbacterium soli (isolates:1; rSTs:1)
          • Microbacterium sorbitolivorans (isolates:2; rSTs:1)
          • Microbacterium sp. (isolates:381; rSTs:331 tree)
          • Microbacterium stercoris (isolates:1; rSTs:1)
          • Microbacterium suaedae (isolates:2; rSTs:1)
          • Microbacterium sufflavum (isolates:2; rSTs:2)
          • Microbacterium sulfonylureivorans (isolates:1; rSTs:1)
          • Microbacterium suwonense (isolates:1; rSTs:1)
          • Microbacterium telephonicum (isolates:1; rSTs:1)
          • Microbacterium tenebrionis (isolates:1; rSTs:1)
          • Microbacterium terrae (isolates:4; rSTs:1)
          • Microbacterium terregens (isolates:1; rSTs:1)
          • Microbacterium terricola (isolates:3; rSTs:1)
          • Microbacterium testaceum (isolates:5; rSTs:5 tree)
          • Microbacterium thalassium (isolates:3; rSTs:1)
          • Microbacterium thalli (isolates:3; rSTs:3 tree)
          • Microbacterium timonense (isolates:1; rSTs:1)
          • Microbacterium trichothecenolyticum (isolates:3; rSTs:3 tree)
          • Microbacterium ulmi (isolates:3; rSTs:1)
          • Microbacterium ureisolvens (isolates:1; rSTs:1)
          • Microbacterium wangchenii (isolates:2; rSTs:2)
          • Microbacterium yannicii (isolates:3; rSTs:1)
        • Microcella (isolates:19; rSTs:16 tree)
          • Chryseoglobus sp. 28M-23 (isolates:1; rSTs:1)
          • Microcella alkalica (isolates:2; rSTs:1)
          • Microcella alkaliphila (isolates:2; rSTs:2)
          • Microcella daejeonensis (isolates:2; rSTs:2)
          • Microcella flavibacter (isolates:1; rSTs:1)
          • Microcella frigidaquae (isolates:3; rSTs:1)
          • Microcella humidisoli (isolates:1; rSTs:1)
          • Microcella indica (isolates:1; rSTs:1)
          • Microcella pacifica (isolates:1; rSTs:1)
          • Microcella putealis (isolates:2; rSTs:1)
          • Microcella sp. (isolates:1; rSTs:2)
          • Yonghaparkia sp. Root332 (isolates:1; rSTs:1)
          • Yonghaparkia sp. Soil809 (isolates:1; rSTs:1)
        • Microterricola (isolates:4; rSTs:5 tree)
          • Microterricola gilva (isolates:1; rSTs:1)
          • Microterricola pindariensis (isolates:1; rSTs:1)
          • Microterricola sp. (isolates:1; rSTs:2)
          • Microterricola viridarii (isolates:1; rSTs:1)
        • Mycetocola (isolates:18; rSTs:14 tree)
          • Mycetocola lacteus (isolates:1; rSTs:1)
          • Mycetocola manganoxydans (isolates:2; rSTs:1)
          • Mycetocola miduiensis (isolates:1; rSTs:1)
          • Mycetocola reblochoni (isolates:2; rSTs:2)
          • Mycetocola saprophilus (isolates:2; rSTs:1)
          • Mycetocola sp. (isolates:4; rSTs:4 tree)
          • Mycetocola spongiae (isolates:1; rSTs:1)
          • Mycetocola tolaasinivorans (isolates:1)
          • Mycetocola zhadangensis (isolates:2; rSTs:1)
          • Mycetocola zhujimingii (isolates:2; rSTs:2)
        • Naasia (isolates:4; rSTs:4 tree)
          • Naasia aerilata (isolates:1; rSTs:1)
          • Naasia lichenicola (isolates:1; rSTs:1)
          • Naasia sp. (isolates:2; rSTs:2)
        • Okibacterium (isolates:1; rSTs:1)
          • Okibacterium fritillariae (isolates:1; rSTs:1)
        • Parafrigoribacterium (isolates:1; rSTs:1)
          • Parafrigoribacterium mesophilum (isolates:1; rSTs:1)
        • Paramicrobacterium (isolates:7; rSTs:7 tree)
          • Paramicrobacterium agarici (isolates:2; rSTs:2)
          • Paramicrobacterium chengjingii (isolates:2; rSTs:2)
          • Paramicrobacterium fandaimingii (isolates:2; rSTs:2)
          • Paramicrobacterium humi (isolates:1; rSTs:1)
        • Planctomonas (isolates:1; rSTs:1)
          • Planctomonas psychrotolerans (isolates:1; rSTs:1)
        • Plantibacter (isolates:27; rSTs:23 tree)
          • Plantibacter cousiniae (isolates:2; rSTs:1)
          • Plantibacter flavus (isolates:3; rSTs:2)
          • Plantibacter sp. (isolates:22; rSTs:20 tree)
        • Pontimonas (isolates:1; rSTs:1)
          • Pontimonas salivibrio (isolates:1; rSTs:1)
        • Protaetiibacter (isolates:4; rSTs:4 tree)
          • Protaetiibacter intestinalis (isolates:1; rSTs:1)
          • Protaetiibacter larvae (isolates:1; rSTs:1)
          • Protaetiibacter mangrovi (isolates:1; rSTs:1)
          • Protaetiibacter sp. (isolates:1; rSTs:1)
        • Pseudoclavibacter (isolates:38; rSTs:31 tree)
          • Pseudoclavibacter alba (isolates:3; rSTs:3 tree)
          • Pseudoclavibacter caeni (isolates:3; rSTs:1)
          • Pseudoclavibacter chungangensis (isolates:2; rSTs:1)
          • Pseudoclavibacter endophyticus (isolates:2; rSTs:2)
          • Pseudoclavibacter helvolus (isolates:3; rSTs:2 tree)
          • Pseudoclavibacter soli (isolates:1; rSTs:1)
          • Pseudoclavibacter sp. (isolates:21; rSTs:18 tree)
          • Pseudoclavibacter terrae (isolates:2; rSTs:2)
          • Pseudoclavibacter triregionum (isolates:1; rSTs:1)
        • Pseudolysinimonas (isolates:1; rSTs:1)
          • Pseudolysinimonas yzui (isolates:1; rSTs:1)
        • Rathayibacter (isolates:178; rSTs:113 tree)
          • Rathayibacter agropyri (isolates:1; rSTs:1)
          • Rathayibacter caricis (isolates:2; rSTs:2)
          • Rathayibacter festucae (isolates:4; rSTs:4 tree)
          • Rathayibacter iranicus (isolates:6; rSTs:2)
          • Rathayibacter oskolensis (isolates:1; rSTs:1)
          • Rathayibacter rathayi (isolates:27; rSTs:16 tree)
          • Rathayibacter rubneri (isolates:1; rSTs:1)
          • Rathayibacter sp. (isolates:87; rSTs:73 tree)
          • Rathayibacter tanaceti (isolates:3; rSTs:2)
          • Rathayibacter toxicus (isolates:40; rSTs:8 tree)
          • Rathayibacter tritici (isolates:6; rSTs:3 tree)
        • Rhodoglobus (isolates:2; rSTs:2)
          • Rhodoglobus aureus (isolates:1; rSTs:1)
          • Rhodoglobus vestalii (isolates:1; rSTs:1)
        • Rhodoluna (isolates:7; rSTs:7 tree)
          • Candidatus Rhodoluna planktonica (isolates:1; rSTs:1)
          • Rhodoluna lacicola (isolates:2; rSTs:2)
          • Rhodoluna limnophila (isolates:3; rSTs:3 tree)
          • Rhodoluna sp. (isolates:1; rSTs:1)
        • Ruicaihuangia (isolates:2; rSTs:1)
          • Ruicaihuangia caeni (isolates:2; rSTs:1)
        • Salinibacterium (isolates:28; rSTs:21 tree)
          • Salinibacterium amurskyense (isolates:4; rSTs:2)
          • Salinibacterium hongtaonis (isolates:2; rSTs:2)
          • Salinibacterium metalliresistens (isolates:1; rSTs:1)
          • Salinibacterium sedimenticola (isolates:1; rSTs:1)
          • Salinibacterium sp. (isolates:18; rSTs:14 tree)
          • Salinibacterium xinjiangense (isolates:2; rSTs:1)
        • Schumannella (isolates:3; rSTs:3 tree)
          • Schumannella luteola (isolates:1; rSTs:1)
          • Schumannella soli (isolates:1; rSTs:1)
          • Schumannella sp. (isolates:1; rSTs:1)
        • Subtercola (isolates:17; rSTs:12 tree)
          • Subtercola boreus (isolates:7; rSTs:4 tree)
          • Subtercola endophyticus (isolates:1; rSTs:1)
          • Subtercola frigoramans (isolates:2; rSTs:1)
          • Subtercola lobariae (isolates:2; rSTs:1)
          • Subtercola sp. (isolates:4; rSTs:4 tree)
          • Subtercola vilae (isolates:1; rSTs:1)
        • Terrimesophilobacter (isolates:3; rSTs:1)
          • Terrimesophilobacter mesophilus (isolates:3; rSTs:1)
      • Micrococcaceae (isolates:1406; rSTs:1067 tree)
        • Acaricomes (isolates:2; rSTs:1)
          • Acaricomes phytoseiuli (isolates:2; rSTs:1)
        • Arthrobacter (isolates:297; rSTs:255 tree)
          • Arthrobacter agilis (isolates:5; rSTs:3 tree)
          • Arthrobacter alkaliphilus (isolates:1; rSTs:1)
          • Arthrobacter alpinus (isolates:4; rSTs:4 tree)
          • Arthrobacter antioxidans (isolates:1; rSTs:1)
          • Arthrobacter bambusae (isolates:3; rSTs:2)
          • Arthrobacter burdickii (isolates:1; rSTs:1)
          • Arthrobacter bussei (isolates:1; rSTs:1)
          • Arthrobacter caoxuetaonis (isolates:3; rSTs:2)
          • Arthrobacter castelli (isolates:1; rSTs:1)
          • Arthrobacter cavernae (isolates:1; rSTs:1)
          • Arthrobacter celericrescens (isolates:1; rSTs:1)
          • Arthrobacter cheniae (isolates:1; rSTs:1)
          • Arthrobacter citreus (isolates:2; rSTs:1)
          • Arthrobacter crusticola (isolates:1; rSTs:1)
          • Arthrobacter cryoconiti (isolates:2; rSTs:1)
          • Arthrobacter crystallopoietes (isolates:4; rSTs:3 tree)
          • Arthrobacter cupressi (isolates:2; rSTs:1)
          • Arthrobacter dokdonellae (isolates:1; rSTs:1)
          • Arthrobacter echini (isolates:1; rSTs:1)
          • Arthrobacter flavus (isolates:1; rSTs:1)
          • Arthrobacter gallicola (isolates:1; rSTs:1)
          • Arthrobacter gandavensis (isolates:1; rSTs:1)
          • Arthrobacter gengyunqii (isolates:3; rSTs:2)
          • Arthrobacter glacialis (isolates:2; rSTs:2)
          • Arthrobacter globiformis (isolates:3; rSTs:2)
          • Arthrobacter gyeryongensis (isolates:1; rSTs:1)
          • Arthrobacter hankyongi (isolates:1; rSTs:1)
          • Arthrobacter horti (isolates:1; rSTs:1)
          • Arthrobacter humicola (isolates:2; rSTs:2)
          • Arthrobacter ipis (isolates:1; rSTs:1)
          • Arthrobacter jiangjiafuii (isolates:3; rSTs:2)
          • Arthrobacter jinronghuae (isolates:3; rSTs:2)
          • Arthrobacter koreensis (isolates:5; rSTs:4 tree)
          • Arthrobacter liuii (isolates:1; rSTs:1)
          • Arthrobacter livingstonensis (isolates:1; rSTs:1)
          • Arthrobacter luteolus (isolates:2; rSTs:1)
          • Arthrobacter mangrovi (isolates:1)
          • Arthrobacter methylotrophus (isolates:1; rSTs:1)
          • Arthrobacter mobilis (isolates:1; rSTs:1)
          • Arthrobacter nitrophenolicus (isolates:3; rSTs:2)
          • Arthrobacter oryzae (isolates:1; rSTs:1)
          • Arthrobacter pascens (isolates:3; rSTs:2)
          • Arthrobacter pigmenti (isolates:1; rSTs:1)
          • Arthrobacter pityocampae (isolates:1; rSTs:1)
          • Arthrobacter psychrochitiniphilus (isolates:2; rSTs:1)
          • Arthrobacter psychrolactophilus (isolates:1; rSTs:1)
          • Arthrobacter pullicola (isolates:1; rSTs:1)
          • Arthrobacter ramosus (isolates:2; rSTs:1)
          • Arthrobacter rhizosphaerae (isolates:1; rSTs:1)
          • Arthrobacter rhombi (isolates:2; rSTs:2)
          • Arthrobacter roseus (isolates:1; rSTs:1)
          • Arthrobacter ruber (isolates:1; rSTs:1)
          • Arthrobacter silvisoli (isolates:1; rSTs:1)
          • Arthrobacter silviterrae (isolates:2; rSTs:1)
          • Arthrobacter sp. (isolates:176; rSTs:159 tree)
          • Arthrobacter stackebrandtii (isolates:1; rSTs:1)
          • Arthrobacter subterraneus (isolates:1; rSTs:1)
          • Arthrobacter sulfonylureivorans (isolates:2; rSTs:2)
          • Arthrobacter sunyaminii (isolates:3; rSTs:2)
          • Arthrobacter terrae (isolates:1; rSTs:1)
          • Arthrobacter terricola (isolates:1; rSTs:1)
          • Arthrobacter tumbae (isolates:1; rSTs:1)
          • Arthrobacter ulcerisalmonis (isolates:1; rSTs:1)
          • Arthrobacter vasquezii (isolates:1)
          • Arthrobacter wenxiniae (isolates:1; rSTs:1)
          • Arthrobacter woluwensis (isolates:5; rSTs:4 tree)
          • Arthrobacter yangruifuii (isolates:2; rSTs:2)
          • Arthrobacter zhangbolii (isolates:3; rSTs:2)
          • Arthrobacter zhaoguopingii (isolates:2; rSTs:2)
          • Arthrobacter zhaoxinii (isolates:2; rSTs:1)
        • Auritidibacter (isolates:16; rSTs:13 tree)
          • Auritidibacter ignavus (isolates:12; rSTs:10 tree)
          • Auritidibacter sp. (isolates:4; rSTs:3 tree)
        • Citricoccus (isolates:13; rSTs:11 tree)
          • Citricoccus alkalitolerans (isolates:1; rSTs:1)
          • Citricoccus muralis (isolates:1; rSTs:1)
          • Citricoccus nitrophenolicus (isolates:2; rSTs:2)
          • Citricoccus sp. (isolates:7; rSTs:6 tree)
          • Citricoccus zhacaiensis (isolates:2; rSTs:1)
        • Enteractinococcus (isolates:5; rSTs:3 tree)
          • Enteractinococcus coprophilus (isolates:2; rSTs:1)
          • Enteractinococcus fodinae (isolates:2; rSTs:1)
          • Enteractinococcus helveticum (isolates:1; rSTs:1)
        • Falsarthrobacter (isolates:2; rSTs:1)
          • Falsarthrobacter nasiphocae (isolates:2; rSTs:1)
        • Galactobacter (isolates:2; rSTs:2)
          • Galactobacter caseinivorans (isolates:1; rSTs:1)
          • Galactobacter valiniphilus (isolates:1; rSTs:1)
        • Garicola (isolates:2)
          • Garicola koreensis (isolates:2)
        • Glutamicibacter (isolates:47; rSTs:39 tree)
          • Glutamicibacter ardleyensis (isolates:1; rSTs:1)
          • Glutamicibacter arilaitensis (isolates:4; rSTs:4 tree)
          • Glutamicibacter creatinolyticus (isolates:3; rSTs:2)
          • Glutamicibacter halophytocola (isolates:5; rSTs:4 tree)
          • Glutamicibacter mishrai (isolates:3; rSTs:3 tree)
          • Glutamicibacter mysorens (isolates:2; rSTs:1)
          • Glutamicibacter nicotianae (isolates:6; rSTs:4 tree)
          • Glutamicibacter protophormiae (isolates:6; rSTs:4 tree)
          • Glutamicibacter soli (isolates:2; rSTs:2)
          • Glutamicibacter sp. (isolates:13; rSTs:13 tree)
          • Glutamicibacter uratoxydans (isolates:2; rSTs:1)
        • Haematomicrobium (isolates:1; rSTs:1)
          • Haematomicrobium sanguinis (isolates:1; rSTs:1)
        • Kocuria (isolates:155; rSTs:122 tree)
          • Kocuria aegyptia (isolates:1; rSTs:1)
          • Kocuria atrinae (isolates:1; rSTs:1)
          • Kocuria carniphila (isolates:2; rSTs:1)
          • Kocuria coralli (isolates:1; rSTs:1)
          • Kocuria dechangensis (isolates:1; rSTs:1)
          • Kocuria flava (isolates:5; rSTs:3 tree)
          • Kocuria gwangalliensis (isolates:1)
          • Kocuria indica (isolates:10; rSTs:6 tree)
          • Kocuria marina (isolates:7; rSTs:7 tree)
          • Kocuria massiliensis (isolates:1; rSTs:1)
          • Kocuria oceani (isolates:1; rSTs:1)
          • Kocuria palustris (isolates:21; rSTs:13 tree)
          • Kocuria polaris (isolates:1; rSTs:1)
          • Kocuria rhizophila (isolates:43; rSTs:31 tree)
          • Kocuria rosea (isolates:16; rSTs:13 tree)
          • Kocuria salina (isolates:1; rSTs:1)
          • Kocuria salsicia (isolates:6; rSTs:6 tree)
          • Kocuria sediminis (isolates:1; rSTs:1)
          • Kocuria soli (isolates:1; rSTs:1)
          • Kocuria sp. (isolates:26; rSTs:25 tree)
          • Kocuria subflava (isolates:1; rSTs:1)
          • Kocuria turfanensis (isolates:2; rSTs:1)
          • Kocuria tytonicola (isolates:2; rSTs:2)
          • Kocuria tytonis (isolates:1; rSTs:1)
          • Kocuria varians (isolates:2; rSTs:2)
        • Micrococcoides (isolates:1; rSTs:1)
          • Micrococcoides hystricis (isolates:1; rSTs:1)
        • Micrococcus (isolates:373; rSTs:241 tree)
          • Micrococcus cohnii (isolates:1; rSTs:1)
          • Micrococcus endophyticus (isolates:3; rSTs:2)
          • Micrococcus flavus (isolates:4; rSTs:1)
          • Micrococcus lacusdianchii (isolates:1; rSTs:1)
          • Micrococcus luteus (isolates:309; rSTs:191 tree)
          • Micrococcus lylae (isolates:6; rSTs:4 tree)
          • Micrococcus porci (isolates:1; rSTs:1)
          • Micrococcus sp. (isolates:42; rSTs:36 tree)
          • Micrococcus terreus (isolates:6; rSTs:4 tree)
        • Neomicrococcus (isolates:5; rSTs:4 tree)
          • Neomicrococcus aestuarii (isolates:3; rSTs:2)
          • Neomicrococcus lactis (isolates:2; rSTs:2)
        • Nesterenkonia (isolates:49; rSTs:37 tree)
          • Nesterenkonia aerolata (isolates:1; rSTs:1)
          • Nesterenkonia aethiopica (isolates:1; rSTs:1)
          • Nesterenkonia alba (isolates:1; rSTs:1)
          • Nesterenkonia alkaliphila (isolates:2; rSTs:1)
          • Nesterenkonia aurantiaca (isolates:1; rSTs:1)
          • Nesterenkonia cremea (isolates:1; rSTs:1)
          • Nesterenkonia ebinurensis (isolates:1; rSTs:1)
          • Nesterenkonia flava (isolates:2; rSTs:1)
          • Nesterenkonia haasae (isolates:1; rSTs:1)
          • Nesterenkonia halobia (isolates:1)
          • Nesterenkonia halophila (isolates:1)
          • Nesterenkonia halotolerans (isolates:1; rSTs:1)
          • Nesterenkonia jeotgali (isolates:3; rSTs:2)
          • Nesterenkonia lacusekhoensis (isolates:1; rSTs:1)
          • Nesterenkonia lutea (isolates:2; rSTs:1)
          • Nesterenkonia marinintestina (isolates:1; rSTs:1)
          • Nesterenkonia massiliensis (isolates:3; rSTs:2)
          • Nesterenkonia muleiensis (isolates:1; rSTs:1)
          • Nesterenkonia natronophila (isolates:1; rSTs:1)
          • Nesterenkonia populi (isolates:1; rSTs:1)
          • Nesterenkonia rhizosphaerae (isolates:1; rSTs:1)
          • Nesterenkonia salmonea (isolates:1; rSTs:1)
          • Nesterenkonia sandarakina (isolates:2; rSTs:1)
          • Nesterenkonia sedimenti (isolates:1; rSTs:1)
          • Nesterenkonia sp. (isolates:14; rSTs:11 tree)
          • Nesterenkonia sphaerica (isolates:1; rSTs:1)
          • Nesterenkonia xinjiangensis (isolates:2; rSTs:1)
        • Paenarthrobacter (isolates:80; rSTs:53 tree)
          • Paenarthrobacter aromaticivorans (isolates:1; rSTs:1)
          • Paenarthrobacter aurescens (isolates:6; rSTs:2)
          • Paenarthrobacter histidinolovorans (isolates:1; rSTs:1)
          • Paenarthrobacter ilicis (isolates:4; rSTs:3 tree)
          • Paenarthrobacter nicotinovorans (isolates:8; rSTs:4 tree)
          • Paenarthrobacter nitroguajacolicus (isolates:5; rSTs:4 tree)
          • Paenarthrobacter sp. (isolates:35; rSTs:28 tree)
          • Paenarthrobacter ureafaciens (isolates:20; rSTs:10 tree)
        • Paeniglutamicibacter (isolates:17; rSTs:13 tree)
          • Paeniglutamicibacter antarcticus (isolates:1; rSTs:1)
          • Paeniglutamicibacter cryotolerans (isolates:2; rSTs:1)
          • Paeniglutamicibacter gangotriensis (isolates:2; rSTs:2)
          • Paeniglutamicibacter kerguelensis (isolates:2; rSTs:1)
          • Paeniglutamicibacter psychrophenolicus (isolates:3; rSTs:2)
          • Paeniglutamicibacter quisquiliarum (isolates:1; rSTs:1)
          • Paeniglutamicibacter sp. (isolates:2; rSTs:2)
          • Paeniglutamicibacter sulfureus (isolates:3; rSTs:2)
          • Paeniglutamicibacter terrestris (isolates:1; rSTs:1)
        • Pseudarthrobacter (isolates:78; rSTs:65 tree)
          • Pseudarthrobacter albicanus (isolates:1; rSTs:1)
          • Pseudarthrobacter chlorophenolicus (isolates:3; rSTs:3 tree)
          • Pseudarthrobacter enclensis (isolates:3; rSTs:2)
          • Pseudarthrobacter equi (isolates:2; rSTs:2)
          • Pseudarthrobacter humi (isolates:1; rSTs:1)
          • Pseudarthrobacter oxydans (isolates:18; rSTs:9 tree)
          • Pseudarthrobacter phenanthrenivorans (isolates:3; rSTs:3 tree)
          • Pseudarthrobacter polychromogenes (isolates:2; rSTs:1)
          • Pseudarthrobacter psychrotolerans (isolates:1; rSTs:1)
          • Pseudarthrobacter scleromae (isolates:1; rSTs:1)
          • Pseudarthrobacter siccitolerans (isolates:1; rSTs:1)
          • Pseudarthrobacter sp. (isolates:40; rSTs:38 tree)
          • Pseudarthrobacter sulfonivorans (isolates:1; rSTs:1)
          • [Micrococcus luteus] (isolates:1; rSTs:1)
        • Pseudoglutamicibacter (isolates:9; rSTs:10 tree)
          • Pseudoglutamicibacter albus (isolates:3; rSTs:3 tree)
          • Pseudoglutamicibacter cumminsii (isolates:6; rSTs:7 tree)
        • Psychromicrobium (isolates:3; rSTs:3 tree)
          • Psychromicrobium lacuslunae (isolates:1; rSTs:1)
          • Psychromicrobium silvestre (isolates:1; rSTs:1)
          • Psychromicrobium xiongbiense (isolates:1; rSTs:1)
        • Renibacterium (isolates:13; rSTs:6 tree)
          • Renibacterium salmoninarum (isolates:13; rSTs:6 tree)
        • Rothia (isolates:204; rSTs:157 tree)
          • Rothia aeria (isolates:13; rSTs:12 tree)
          • Rothia aerolata (isolates:1; rSTs:1)
          • Rothia amarae (isolates:3; rSTs:3 tree)
          • Rothia dentocariosa (isolates:22; rSTs:18 tree)
          • Rothia endophytica (isolates:2; rSTs:2)
          • Rothia halotolerans (isolates:1; rSTs:1)
          • Rothia koreensis (isolates:2; rSTs:1)
          • Rothia kristinae (isolates:31; rSTs:13 tree)
          • Rothia mucilaginosa (isolates:28; rSTs:25 tree)
          • Rothia nasimurium (isolates:39; rSTs:22 tree)
          • Rothia nasisuis (isolates:6; rSTs:4 tree)
          • Rothia santali (isolates:1; rSTs:1)
          • Rothia sp. (isolates:50; rSTs:50 tree)
          • Rothia terrae (isolates:5; rSTs:4 tree)
        • Sinomonas (isolates:19; rSTs:16 tree)
          • Sinomonas albida (isolates:2; rSTs:2)
          • Sinomonas atrocyanea (isolates:3; rSTs:1)
          • Sinomonas cellulolyticus (isolates:1; rSTs:1)
          • Sinomonas flava (isolates:1; rSTs:1)
          • Sinomonas gamaensis (isolates:1; rSTs:1)
          • Sinomonas halotolerans (isolates:1; rSTs:1)
          • Sinomonas humi (isolates:1; rSTs:1)
          • Sinomonas mesophila (isolates:1; rSTs:1)
          • Sinomonas notoginsengisoli (isolates:1; rSTs:1)
          • Sinomonas sp. (isolates:4; rSTs:3 tree)
          • Sinomonas susongensis (isolates:1; rSTs:1)
          • Sinomonas terrae (isolates:1; rSTs:1)
          • Sinomonas terricola (isolates:1; rSTs:1)
        • Specibacter (isolates:1; rSTs:1)
          • Specibacter cremeus (isolates:1; rSTs:1)
        • Tersicoccus (isolates:4; rSTs:4 tree)
          • Tersicoccus phoenicis (isolates:1; rSTs:1)
          • Tersicoccus solisilvae (isolates:1; rSTs:1)
          • Tersicoccus sp. (isolates:2; rSTs:2)
        • Yaniella (isolates:2; rSTs:2)
          • Yaniella flava (isolates:1; rSTs:1)
          • Yaniella halotolerans (isolates:1; rSTs:1)
        • Zafaria (isolates:1; rSTs:1)
          • Zafaria cholistanensis (isolates:1; rSTs:1)
        • Zhihengliuella (isolates:5; rSTs:5 tree)
          • Zhihengliuella alba (isolates:1; rSTs:1)
          • Zhihengliuella flava (isolates:1; rSTs:1)
          • Zhihengliuella halotolerans (isolates:2; rSTs:2)
          • Zhihengliuella salsuginis (isolates:1; rSTs:1)
      • Ornithinimicrobiaceae (isolates:42; rSTs:30 tree)
        • Ornithinimicrobium (isolates:29; rSTs:19 tree)
          • Ornithinimicrobium avium (isolates:1; rSTs:1)
          • Ornithinimicrobium cerasi (isolates:2; rSTs:2)
          • Ornithinimicrobium ciconiae (isolates:1; rSTs:1)
          • Ornithinimicrobium cryptoxanthini (isolates:4; rSTs:2)
          • Ornithinimicrobium faecis (isolates:4; rSTs:2)
          • Ornithinimicrobium flavum (isolates:1; rSTs:1)
          • Ornithinimicrobium humiphilum (isolates:2; rSTs:1)
          • Ornithinimicrobium kibberense (isolates:1; rSTs:1)
          • Ornithinimicrobium laminariae (isolates:1; rSTs:1)
          • Ornithinimicrobium murale (isolates:1)
          • Ornithinimicrobium pekingense (isolates:2; rSTs:1)
          • Ornithinimicrobium pratense (isolates:1; rSTs:1)
          • Ornithinimicrobium sediminis (isolates:1; rSTs:1)
          • Ornithinimicrobium sp. (isolates:3; rSTs:2 tree)
          • Ornithinimicrobium sufpigmenti (isolates:2; rSTs:1)
          • Ornithinimicrobium tianjinense (isolates:2; rSTs:1)
        • Serinicoccus (isolates:13; rSTs:11 tree)
          • Serinicoccus chungangensis (isolates:3; rSTs:2)
          • Serinicoccus hydrothermalis (isolates:1; rSTs:1)
          • Serinicoccus kebangsaanensis (isolates:1; rSTs:1)
          • Serinicoccus marinus (isolates:3; rSTs:3 tree)
          • Serinicoccus profundi (isolates:2; rSTs:1)
          • Serinicoccus sediminis (isolates:1; rSTs:1)
          • Serinicoccus sp. (isolates:2; rSTs:2)
      • Promicromonosporaceae (isolates:101; rSTs:94 tree)
        • Antribacter (isolates:1; rSTs:1)
          • Antribacter soli (isolates:1; rSTs:1)
        • Cellulosimicrobium (isolates:40; rSTs:39 tree)
          • Cellulosimicrobium aquatile (isolates:2; rSTs:2)
          • Cellulosimicrobium arenosum (isolates:1; rSTs:1)
          • Cellulosimicrobium cellulans (isolates:15; rSTs:13 tree)
          • Cellulosimicrobium composti (isolates:2; rSTs:2)
          • Cellulosimicrobium funkei (isolates:2; rSTs:1)
          • Cellulosimicrobium marinum (isolates:1; rSTs:1)
          • Cellulosimicrobium protaetiae (isolates:1; rSTs:1)
          • Cellulosimicrobium sp. (isolates:16; rSTs:18 tree)
        • Isoptericola (isolates:23; rSTs:20 tree)
          • Isoptericola chiayiensis (isolates:2; rSTs:1)
          • Isoptericola croceus (isolates:1; rSTs:1)
          • Isoptericola cucumis (isolates:2; rSTs:2)
          • Isoptericola dokdonensis (isolates:1; rSTs:1)
          • Isoptericola halalbus (isolates:1; rSTs:1)
          • Isoptericola haloaureus (isolates:1; rSTs:1)
          • Isoptericola halotolerans (isolates:2; rSTs:1)
          • Isoptericola hypogeus (isolates:1; rSTs:1)
          • Isoptericola jiangsuensis (isolates:1; rSTs:1)
          • Isoptericola luteus (isolates:1; rSTs:1)
          • Isoptericola sediminis (isolates:1; rSTs:1)
          • Isoptericola sp. (isolates:7; rSTs:7 tree)
          • Isoptericola variabilis (isolates:2; rSTs:1)
        • Krasilnikoviella (isolates:1; rSTs:1)
          • Krasilnikoviella flava (isolates:1; rSTs:1)
        • Myceligenerans (isolates:6; rSTs:5 tree)
          • Myceligenerans crystallogenes (isolates:1; rSTs:1)
          • Myceligenerans indicum (isolates:1; rSTs:1)
          • Myceligenerans pegani (isolates:2; rSTs:1)
          • Myceligenerans salitolerans (isolates:1; rSTs:1)
          • Myceligenerans xiligouense (isolates:1; rSTs:1)
        • Promicromonospora (isolates:23; rSTs:21 tree)
          • Promicromonospora citrea (isolates:2; rSTs:1)
          • Promicromonospora iranensis (isolates:3; rSTs:2)
          • Promicromonospora kroppenstedtii (isolates:1; rSTs:1)
          • Promicromonospora panici (isolates:1; rSTs:1)
          • Promicromonospora soli (isolates:1; rSTs:1)
          • Promicromonospora sp. (isolates:9; rSTs:11 tree)
          • Promicromonospora sukumoe (isolates:2; rSTs:1)
          • Promicromonospora thailandica (isolates:2; rSTs:2)
          • Promicromonospora umidemergens (isolates:2; rSTs:1)
        • Puerhibacterium (isolates:1; rSTs:1)
          • Puerhibacterium puerhi (isolates:1; rSTs:1)
        • Xylanimonas (isolates:6; rSTs:6 tree)
          • Xylanimonas allomyrinae (isolates:1; rSTs:1)
          • Xylanimonas cellulosilytica (isolates:1; rSTs:1)
          • Xylanimonas oleitrophica (isolates:1; rSTs:1)
          • Xylanimonas pachnodae (isolates:1; rSTs:1)
          • Xylanimonas protaetiae (isolates:1; rSTs:1)
          • Xylanimonas ulmi (isolates:1; rSTs:1)
      • Rarobacteraceae (isolates:4; rSTs:2)
        • Rarobacter (isolates:4; rSTs:2)
          • Rarobacter faecitabidus (isolates:2; rSTs:1)
          • Rarobacter incanus (isolates:2; rSTs:1)
      • Ruaniaceae (isolates:13; rSTs:12 tree)
        • Occultella (isolates:5; rSTs:5 tree)
          • Occultella aeris (isolates:1; rSTs:1)
          • Occultella glacieicola (isolates:1; rSTs:1)
          • Occultella gossypii (isolates:1; rSTs:1)
          • Occultella kanbiaonis (isolates:2; rSTs:2)
        • Ruania (isolates:8; rSTs:7 tree)
          • Ruania alba (isolates:1; rSTs:1)
          • Ruania albidiflava (isolates:1; rSTs:1)
          • Ruania alkalisoli (isolates:1; rSTs:1)
          • Ruania halotolerans (isolates:1; rSTs:1)
          • Ruania rhizosphaerae (isolates:1; rSTs:1)
          • Ruania suaedae (isolates:1; rSTs:1)
          • Ruania zhangjianzhongii (isolates:2; rSTs:1)
      • Sanguibacteraceae (isolates:12; rSTs:10 tree)
        • Sanguibacter (isolates:12; rSTs:10 tree)
          • Sanguibacter antarcticus (isolates:1; rSTs:1)
          • Sanguibacter gelidistatuariae (isolates:1; rSTs:1)
          • Sanguibacter hominis (isolates:1; rSTs:1)
          • Sanguibacter inulinus (isolates:2; rSTs:1)
          • Sanguibacter keddieii (isolates:1; rSTs:1)
          • Sanguibacter sp. (isolates:4; rSTs:3 tree)
          • Sanguibacter suaedae (isolates:1; rSTs:1)
          • Sanguibacter suarezii (isolates:1; rSTs:1)
      • Tropherymataceae (isolates:19; rSTs:16 tree)
        • Tropheryma (isolates:19; rSTs:16 tree)
          • Tropheryma whipplei (isolates:19; rSTs:16 tree)
    • Micromonosporales (isolates:984; rSTs:824 tree)
      • Micromonosporaceae (isolates:984; rSTs:824 tree)
        • Actinocatenispora (isolates:8; rSTs:5 tree)
          • Actinocatenispora comari (isolates:1; rSTs:1)
          • Actinocatenispora rupis (isolates:2; rSTs:1)
          • Actinocatenispora sera (isolates:3; rSTs:2)
          • Actinocatenispora thailandica (isolates:2; rSTs:1)
        • Actinoplanes (isolates:126; rSTs:86 tree)
          • Actinoplanes abujensis (isolates:2; rSTs:1)
          • Actinoplanes aksuensis (isolates:1; rSTs:1)
          • Actinoplanes atraurantiacus (isolates:1; rSTs:1)
          • Actinoplanes auranticolor (isolates:2; rSTs:1)
          • Actinoplanes aureus (isolates:1; rSTs:1)
          • Actinoplanes awajinensis (isolates:1; rSTs:1)
          • Actinoplanes bogorensis (isolates:1; rSTs:1)
          • Actinoplanes brasiliensis (isolates:2; rSTs:1)
          • Actinoplanes campanulatus (isolates:3; rSTs:1)
          • Actinoplanes capillaceus (isolates:2; rSTs:1)
          • Actinoplanes consettensis (isolates:2; rSTs:1)
          • Actinoplanes couchii (isolates:3; rSTs:1)
          • Actinoplanes cyaneus (isolates:3; rSTs:1)
          • Actinoplanes deccanensis (isolates:2; rSTs:1)
          • Actinoplanes derwentensis (isolates:2; rSTs:1)
          • Actinoplanes digitatis (isolates:2; rSTs:1)
          • Actinoplanes durhamensis (isolates:2; rSTs:2)
          • Actinoplanes ferrugineus (isolates:2; rSTs:1)
          • Actinoplanes flavus (isolates:1; rSTs:1)
          • Actinoplanes friuliensis (isolates:1; rSTs:1)
          • Actinoplanes globisporus (isolates:1; rSTs:1)
          • Actinoplanes hotanensis (isolates:1; rSTs:1)
          • Actinoplanes hulinensis (isolates:1; rSTs:1)
          • Actinoplanes humidus (isolates:2; rSTs:1)
          • Actinoplanes ianthinogenes (isolates:2; rSTs:1)
          • Actinoplanes italicus (isolates:2; rSTs:1)
          • Actinoplanes lichenicola (isolates:1; rSTs:1)
          • Actinoplanes liguriensis (isolates:1)
          • Actinoplanes lobatus (isolates:3; rSTs:1)
          • Actinoplanes lutulentus (isolates:2; rSTs:1)
          • Actinoplanes maris (isolates:1; rSTs:1)
          • Actinoplanes missouriensis (isolates:2; rSTs:1)
          • Actinoplanes nipponensis (isolates:2; rSTs:2)
          • Actinoplanes oblitus (isolates:1; rSTs:1)
          • Actinoplanes octamycinicus (isolates:3; rSTs:1)
          • Actinoplanes ovalisporus (isolates:1; rSTs:1)
          • Actinoplanes palleronii (isolates:2; rSTs:1)
          • Actinoplanes philippinensis (isolates:3; rSTs:2)
          • Actinoplanes polyasparticus (isolates:1; rSTs:1)
          • Actinoplanes pyxinae (isolates:1; rSTs:1)
          • Actinoplanes rectilineatus (isolates:1; rSTs:1)
          • Actinoplanes regularis (isolates:3; rSTs:2)
          • Actinoplanes rishiriensis (isolates:1; rSTs:1)
          • Actinoplanes sandaracinus (isolates:1; rSTs:1)
          • Actinoplanes siamensis (isolates:1; rSTs:1)
          • Actinoplanes sichuanensis (isolates:1; rSTs:1)
          • Actinoplanes solisilvae (isolates:1; rSTs:1)
          • Actinoplanes sp. (isolates:33; rSTs:29 tree)
          • Actinoplanes subtropicus (isolates:1; rSTs:1)
          • Actinoplanes teichomyceticus (isolates:4; rSTs:1)
          • Actinoplanes tereljensis (isolates:2; rSTs:1)
          • Actinoplanes toevensis (isolates:1; rSTs:1)
          • Actinoplanes utahensis (isolates:3; rSTs:1)
          • Actinoplanes xinjiangensis (isolates:3; rSTs:2)
          • Ampullariella violaceochromogenes (isolates:1)
        • Actinorhabdospora (isolates:1; rSTs:1)
          • Actinorhabdospora filicis (isolates:1; rSTs:1)
        • Allocatelliglobosispora (isolates:1; rSTs:1)
          • Allocatelliglobosispora scoriae (isolates:1; rSTs:1)
        • Allorhizocola (isolates:1; rSTs:1)
          • Allorhizocola rhizosphaerae (isolates:1; rSTs:1)
        • Asanoa (isolates:13; rSTs:8 tree)
          • Asanoa ferruginea (isolates:2; rSTs:1)
          • Asanoa hainanensis (isolates:1; rSTs:1)
          • Asanoa iriomotensis (isolates:2; rSTs:1)
          • Asanoa ishikariensis (isolates:2; rSTs:1)
          • Asanoa siamensis (isolates:1; rSTs:1)
          • Asanoa sp. (isolates:5; rSTs:3 tree)
        • Catellatospora (isolates:21; rSTs:15 tree)
          • Catellatospora bangladeshensis (isolates:1; rSTs:1)
          • Catellatospora chokoriensis (isolates:3; rSTs:1)
          • Catellatospora citrea (isolates:1; rSTs:1)
          • Catellatospora coxensis (isolates:2; rSTs:1)
          • Catellatospora methionotrophica (isolates:4; rSTs:2)
          • Catellatospora paridis (isolates:1; rSTs:1)
          • Catellatospora sichuanensis (isolates:1; rSTs:1)
          • Catellatospora sp. (isolates:6; rSTs:5 tree)
          • Catellatospora tritici (isolates:1; rSTs:1)
          • Catellatospora vulcania (isolates:1; rSTs:1)
        • Catelliglobosispora (isolates:1; rSTs:1)
          • Catelliglobosispora koreensis (isolates:1; rSTs:1)
        • Catenuloplanes (isolates:12; rSTs:5 tree)
          • Catenuloplanes atrovinosus (isolates:2; rSTs:1)
          • Catenuloplanes castaneus (isolates:1)
          • Catenuloplanes crispus (isolates:1)
          • Catenuloplanes indicus (isolates:2; rSTs:1)
          • Catenuloplanes japonicus (isolates:2; rSTs:1)
          • Catenuloplanes nepalensis (isolates:2; rSTs:1)
          • Catenuloplanes niger (isolates:2; rSTs:1)
        • Couchioplanes (isolates:3; rSTs:2)
          • Couchioplanes caeruleus (isolates:3; rSTs:2)
        • Dactylosporangium (isolates:32; rSTs:23 tree)
          • Dactylosporangium aurantiacum (isolates:4; rSTs:1)
          • Dactylosporangium darangshiense (isolates:1; rSTs:1)
          • Dactylosporangium fulvum (isolates:2; rSTs:1)
          • Dactylosporangium maewongense (isolates:1; rSTs:1)
          • Dactylosporangium matsuzakiense (isolates:3; rSTs:1)
          • Dactylosporangium roseum (isolates:2; rSTs:1)
          • Dactylosporangium salmoneum (isolates:1; rSTs:1)
          • Dactylosporangium siamense (isolates:2; rSTs:1)
          • Dactylosporangium sp. (isolates:14; rSTs:13 tree)
          • Dactylosporangium sucinum (isolates:1; rSTs:1)
          • Dactylosporangium vinaceum (isolates:1; rSTs:1)
        • Hamadaea (isolates:4; rSTs:4 tree)
          • Hamadaea flava (isolates:1; rSTs:1)
          • Hamadaea sp. (isolates:2; rSTs:2)
          • Hamadaea tsunoensis (isolates:1; rSTs:1)
        • Jidongwangia (isolates:1; rSTs:1)
          • Jidongwangia harbinensis (isolates:1; rSTs:1)
        • Krasilnikovia (isolates:1; rSTs:1)
          • Krasilnikovia cinnamomea (isolates:1; rSTs:1)
        • Longispora (isolates:4; rSTs:3 tree)
          • Longispora albida (isolates:1; rSTs:1)
          • Longispora fulva (isolates:2; rSTs:1)
          • Longispora sp. (isolates:1; rSTs:1)
        • Luedemannella (isolates:2; rSTs:1)
          • Luedemannella flava (isolates:1)
          • Luedemannella helvata (isolates:1; rSTs:1)
        • Mangrovihabitans (isolates:1; rSTs:1)
          • Mangrovihabitans endophyticus (isolates:1; rSTs:1)
        • Micromonospora (isolates:597; rSTs:535 tree)
          • Micromonospora acroterricola (isolates:1; rSTs:1)
          • Micromonospora alfalfae (isolates:1; rSTs:1)
          • Micromonospora andamanensis (isolates:2; rSTs:2)
          • Micromonospora antibiotica (isolates:1; rSTs:1)
          • Micromonospora arborensis (isolates:4; rSTs:4 tree)
          • Micromonospora arida (isolates:5; rSTs:5 tree)
          • Micromonospora aurantiaca (isolates:8; rSTs:8 tree)
          • Micromonospora auratinigra (isolates:1; rSTs:1)
          • Micromonospora avicenniae (isolates:3; rSTs:3 tree)
          • Micromonospora cabrerizensis (isolates:1; rSTs:1)
          • Micromonospora carbonacea (isolates:5; rSTs:3 tree)
          • Micromonospora cathayae (isolates:1; rSTs:1)
          • Micromonospora chaiyaphumensis (isolates:1; rSTs:1)
          • Micromonospora chalcea (isolates:17; rSTs:16 tree)
          • Micromonospora chersina (isolates:9; rSTs:9 tree)
          • Micromonospora chokoriensis (isolates:1; rSTs:1)
          • Micromonospora citrea (isolates:1; rSTs:1)
          • Micromonospora coriariae (isolates:1; rSTs:1)
          • Micromonospora costi (isolates:2; rSTs:2)
          • Micromonospora coxensis (isolates:3; rSTs:3 tree)
          • Micromonospora craniellae (isolates:2; rSTs:1)
          • Micromonospora craterilacus (isolates:1; rSTs:1)
          • Micromonospora cremea (isolates:1; rSTs:1)
          • Micromonospora deserti (isolates:1; rSTs:1)
          • Micromonospora eburnea (isolates:1; rSTs:1)
          • Micromonospora echinaurantiaca (isolates:2; rSTs:2)
          • Micromonospora echinofusca (isolates:8; rSTs:8 tree)
          • Micromonospora echinospora (isolates:4; rSTs:3 tree)
          • Micromonospora endolithica (isolates:2; rSTs:1)
          • Micromonospora endophytica (isolates:3; rSTs:1)
          • Micromonospora ferruginea (isolates:1; rSTs:1)
          • Micromonospora fiedleri (isolates:1; rSTs:1)
          • Micromonospora foliorum (isolates:1; rSTs:1)
          • Micromonospora fulviviridis (isolates:3; rSTs:2)
          • Micromonospora gifhornensis (isolates:2; rSTs:1)
          • Micromonospora globbae (isolates:4; rSTs:4 tree)
          • Micromonospora globispora (isolates:3; rSTs:3 tree)
          • Micromonospora globosa (isolates:1; rSTs:1)
          • Micromonospora haikouensis (isolates:5; rSTs:5 tree)
          • Micromonospora halophytica (isolates:1; rSTs:1)
          • Micromonospora halotolerans (isolates:1; rSTs:1)
          • Micromonospora hortensis (isolates:1; rSTs:1)
          • Micromonospora humi (isolates:1; rSTs:1)
          • Micromonospora humida (isolates:5; rSTs:4 tree)
          • Micromonospora humidisoli (isolates:1; rSTs:1)
          • Micromonospora inaquosa (isolates:2; rSTs:2)
          • Micromonospora inositola (isolates:1; rSTs:1)
          • Micromonospora inyonensis (isolates:1; rSTs:1)
          • Micromonospora jinlongensis (isolates:1; rSTs:1)
          • Micromonospora kangleipakensis (isolates:1; rSTs:1)
          • Micromonospora krabiensis (isolates:1; rSTs:1)
          • Micromonospora lupini (isolates:5; rSTs:4 tree)
          • Micromonospora lutea (isolates:1; rSTs:1)
          • Micromonospora luteifusca (isolates:2; rSTs:1)
          • Micromonospora marina (isolates:2; rSTs:2)
          • Micromonospora maris (isolates:2; rSTs:1)
          • Micromonospora maritima (isolates:2; rSTs:1)
          • Micromonospora matsumotoense (isolates:4; rSTs:4 tree)
          • Micromonospora mirobrigensis (isolates:1; rSTs:1)
          • Micromonospora musae (isolates:6; rSTs:5 tree)
          • Micromonospora narathiwatensis (isolates:1; rSTs:1)
          • Micromonospora nigra (isolates:1; rSTs:1)
          • Micromonospora noduli (isolates:8; rSTs:8 tree)
          • Micromonospora okii (isolates:1; rSTs:1)
          • Micromonospora olivasterospora (isolates:2; rSTs:1)
          • Micromonospora orduensis (isolates:2; rSTs:2)
          • Micromonospora pallida (isolates:1; rSTs:1)
          • Micromonospora palomenae (isolates:1; rSTs:1)
          • Micromonospora parastrephiae (isolates:1)
          • Micromonospora parathelypteridis (isolates:2; rSTs:1)
          • Micromonospora parva (isolates:9; rSTs:9 tree)
          • Micromonospora pattaloongensis (isolates:1; rSTs:1)
          • Micromonospora peucetia (isolates:4; rSTs:4 tree)
          • Micromonospora phaseoli (isolates:3; rSTs:1)
          • Micromonospora phytophila (isolates:1; rSTs:1)
          • Micromonospora pisi (isolates:1; rSTs:1)
          • Micromonospora polyrhachis (isolates:1; rSTs:1)
          • Micromonospora profundi (isolates:5; rSTs:5 tree)
          • Micromonospora provocatoris (isolates:1)
          • Micromonospora purpureochromogenes (isolates:2; rSTs:2)
          • Micromonospora qiuiae (isolates:1; rSTs:1)
          • Micromonospora radicis (isolates:1; rSTs:1)
          • Micromonospora rhizosphaerae (isolates:1; rSTs:1)
          • Micromonospora rifamycinica (isolates:6; rSTs:6 tree)
          • Micromonospora rosaria (isolates:1; rSTs:1)
          • Micromonospora rubida (isolates:1; rSTs:1)
          • Micromonospora saelicesensis (isolates:6; rSTs:6 tree)
          • Micromonospora sagamiensis (isolates:2; rSTs:1)
          • Micromonospora salmantinae (isolates:1; rSTs:1)
          • Micromonospora sediminicola (isolates:6; rSTs:4 tree)
          • Micromonospora sediminimaris (isolates:1; rSTs:1)
          • Micromonospora siamensis (isolates:1; rSTs:1)
          • Micromonospora solifontis (isolates:2; rSTs:1)
          • Micromonospora sonchi (isolates:1; rSTs:1)
          • Micromonospora sp. (isolates:289; rSTs:263 tree)
          • Micromonospora tarapacensis (isolates:1; rSTs:1)
          • Micromonospora taraxaci (isolates:8; rSTs:7 tree)
          • Micromonospora tarensis (isolates:1; rSTs:1)
          • Micromonospora terminaliae (isolates:2; rSTs:1)
          • Micromonospora thermarum (isolates:1; rSTs:1)
          • Micromonospora trifolii (isolates:1; rSTs:1)
          • Micromonospora tulbaghiae (isolates:15; rSTs:13 tree)
          • Micromonospora ureilytica (isolates:5; rSTs:4 tree)
          • Micromonospora veneta (isolates:1; rSTs:1)
          • Micromonospora vinacea (isolates:3; rSTs:2)
          • Micromonospora violae (isolates:2; rSTs:2)
          • Micromonospora viridifaciens (isolates:1; rSTs:1)
          • Micromonospora wenchangensis (isolates:3; rSTs:3 tree)
          • Micromonospora yangpuensis (isolates:2; rSTs:1)
          • Micromonospora yasonensis (isolates:1; rSTs:1)
          • Micromonospora zamorensis (isolates:13; rSTs:12 tree)
          • Micromonospora zingiberis (isolates:1; rSTs:1)
          • Verrucosispora sioxanthis (isolates:2; rSTs:1)
          • Verrucosispora sp. (isolates:10; rSTs:9 tree)
        • Natronosporangium (isolates:1)
          • Natronosporangium hydrolyticum (isolates:1)
        • Nucisporomicrobium (isolates:1; rSTs:1)
          • Nucisporomicrobium flavum (isolates:1; rSTs:1)
        • Phytohabitans (isolates:9; rSTs:8 tree)
          • Phytohabitans aurantiacus (isolates:1; rSTs:1)
          • Phytohabitans flavus (isolates:2; rSTs:1)
          • Phytohabitans houttuyneae (isolates:2; rSTs:2)
          • Phytohabitans maris (isolates:1; rSTs:1)
          • Phytohabitans rumicis (isolates:2; rSTs:2)
          • Phytohabitans suffuscus (isolates:1; rSTs:1)
        • Phytomonospora (isolates:3; rSTs:2)
          • Phytomonospora endophytica (isolates:2; rSTs:1)
          • Phytomonospora sp. (isolates:1; rSTs:1)
        • Pilimelia (isolates:3; rSTs:3 tree)
          • Pilimelia anulata (isolates:1; rSTs:1)
          • Pilimelia columellifera (isolates:1; rSTs:1)
          • Pilimelia terevasa (isolates:1; rSTs:1)
        • Planosporangium (isolates:6; rSTs:3 tree)
          • Planosporangium flavigriseum (isolates:3; rSTs:1)
          • Planosporangium mesophilum (isolates:2; rSTs:1)
          • Planosporangium thailandense (isolates:1; rSTs:1)
        • Plantactinospora (isolates:16; rSTs:15 tree)
          • Plantactinospora alkalitolerans (isolates:1; rSTs:1)
          • Plantactinospora endophytica (isolates:1; rSTs:1)
          • Plantactinospora mayteni (isolates:2; rSTs:1)
          • Plantactinospora sonchi (isolates:1; rSTs:1)
          • Plantactinospora soyae (isolates:1; rSTs:1)
          • Plantactinospora sp. (isolates:9; rSTs:9 tree)
          • Plantactinospora veratri (isolates:1; rSTs:1)
        • Polymorphospora (isolates:6; rSTs:5 tree)
          • Polymorphospora rubra (isolates:4; rSTs:3 tree)
          • Polymorphospora sp. (isolates:2; rSTs:2)
        • Pseudosporangium (isolates:1; rSTs:1)
          • Pseudosporangium ferrugineum (isolates:1; rSTs:1)
        • Rhizocola (isolates:1; rSTs:1)
          • Rhizocola hellebori (isolates:1; rSTs:1)
        • Rugosimonospora (isolates:2; rSTs:2)
          • Rugosimonospora acidiphila (isolates:1; rSTs:1)
          • Rugosimonospora africana (isolates:1; rSTs:1)
        • Salinispora (isolates:93; rSTs:78 tree)
          • Salinispora arenicola (isolates:53; rSTs:43 tree)
          • Salinispora cortesiana (isolates:1; rSTs:1)
          • Salinispora fenicalii (isolates:2; rSTs:2)
          • Salinispora mooreana (isolates:3; rSTs:2)
          • Salinispora oceanensis (isolates:3; rSTs:2)
          • Salinispora pacifica (isolates:17; rSTs:16 tree)
          • Salinispora sp. (isolates:1; rSTs:1)
          • Salinispora tropica (isolates:11; rSTs:10 tree)
          • Salinispora vitiensis (isolates:2; rSTs:1)
        • Solwaraspora (isolates:7; rSTs:7 tree)
          • Solwaraspora sp. (isolates:7; rSTs:7 tree)
        • Spirilliplanes (isolates:3; rSTs:1)
          • Spirilliplanes yamanashiensis (isolates:3; rSTs:1)
        • Virgisporangium (isolates:3; rSTs:3 tree)
          • Virgisporangium aliadipatigenens (isolates:1; rSTs:1)
          • Virgisporangium aurantiacum (isolates:1; rSTs:1)
          • Virgisporangium ochraceum (isolates:1; rSTs:1)
    • Motilibacterales (isolates:5; rSTs:5 tree)
      • Motilibacteraceae (isolates:4; rSTs:4 tree)
        • Motilibacter (isolates:4; rSTs:4 tree)
          • Motilibacter aurantiacus (isolates:1; rSTs:1)
          • Motilibacter deserti (isolates:1; rSTs:1)
          • Motilibacter peucedani (isolates:1; rSTs:1)
          • Motilibacter rhizosphaerae (isolates:1; rSTs:1)
      • Vallicoccaceae (isolates:1; rSTs:1)
        • Vallicoccus (isolates:1; rSTs:1)
          • Vallicoccus soli (isolates:1; rSTs:1)
    • Mycobacteriales (isolates:21179; rSTs:5958)
      • Corynebacteriaceae (isolates:2479; rSTs:1432 tree)
        • Corynebacterium (isolates:2479; rSTs:1432 tree)
          • Corynebacterium accolens (isolates:41; rSTs:26 tree)
          • Corynebacterium afermentans (isolates:2; rSTs:1)
          • Corynebacterium alimapuense (isolates:1; rSTs:1)
          • Corynebacterium ammoniagenes (isolates:6; rSTs:3 tree)
          • Corynebacterium amycolatum (isolates:44; rSTs:33 tree)
          • Corynebacterium anserum (isolates:2; rSTs:2)
          • Corynebacterium antarcticum (isolates:6; rSTs:6 tree)
          • Corynebacterium appendicis (isolates:3; rSTs:3 tree)
          • Corynebacterium aquatimens (isolates:2; rSTs:1)
          • Corynebacterium aquilae (isolates:1; rSTs:1)
          • Corynebacterium argentoratense (isolates:8; rSTs:5 tree)
          • Corynebacterium atrinae (isolates:1; rSTs:1)
          • Corynebacterium atypicum (isolates:1; rSTs:1)
          • Corynebacterium aurimucosum (isolates:7; rSTs:3 tree)
          • Corynebacterium auris (isolates:1; rSTs:1)
          • Corynebacterium auriscanis (isolates:3; rSTs:2)
          • Corynebacterium belfantii (isolates:17; rSTs:14 tree)
          • Corynebacterium bouchesdurhonense (isolates:2; rSTs:1)
          • Corynebacterium bovis (isolates:37; rSTs:20 tree)
          • Corynebacterium breve (isolates:1; rSTs:1)
          • Corynebacterium callunae (isolates:3; rSTs:2)
          • Corynebacterium camporealensis (isolates:2; rSTs:1)
          • Corynebacterium canis (isolates:3; rSTs:1)
          • Corynebacterium capitovis (isolates:2; rSTs:1)
          • Corynebacterium casei (isolates:4; rSTs:4 tree)
          • Corynebacterium caspium (isolates:2; rSTs:1)
          • Corynebacterium choanae (isolates:1; rSTs:1)
          • Corynebacterium ciconiae (isolates:2; rSTs:1)
          • Corynebacterium comes (isolates:1; rSTs:1)
          • Corynebacterium confusum (isolates:1; rSTs:1)
          • Corynebacterium coyleae (isolates:15; rSTs:10 tree)
          • Corynebacterium crudilactis (isolates:1; rSTs:1)
          • Corynebacterium curieae (isolates:2; rSTs:2)
          • Corynebacterium cystitidis (isolates:8; rSTs:6 tree)
          • Corynebacterium dentalis (isolates:1; rSTs:1)
          • Corynebacterium deserti (isolates:1; rSTs:1)
          • Corynebacterium diphtheriae (isolates:665; rSTs:318 tree)
          • Corynebacterium doosanense (isolates:2; rSTs:1)
          • Corynebacterium durum (isolates:4; rSTs:2)
          • Corynebacterium efficiens (isolates:2; rSTs:1)
          • Corynebacterium endometrii (isolates:1; rSTs:1)
          • Corynebacterium epidermidicanis (isolates:1; rSTs:1)
          • Corynebacterium evansiae (isolates:1; rSTs:1)
          • Corynebacterium faecale (isolates:1; rSTs:1)
          • Corynebacterium faecium (isolates:1; rSTs:1)
          • Corynebacterium falsenii (isolates:5; rSTs:4 tree)
          • Corynebacterium felinum (isolates:4; rSTs:1)
          • Corynebacterium flavescens (isolates:3; rSTs:1)
          • Corynebacterium fournieri (isolates:2; rSTs:1)
          • Corynebacterium frankenforstense (isolates:2; rSTs:2)
          • Corynebacterium freiburgense (isolates:2; rSTs:1)
          • Corynebacterium freneyi (isolates:7; rSTs:5 tree)
          • Corynebacterium gallinarum (isolates:1; rSTs:1)
          • Corynebacterium genitalium (isolates:2; rSTs:1)
          • Corynebacterium gerontici (isolates:1; rSTs:1)
          • Corynebacterium glaucum (isolates:3; rSTs:2)
          • Corynebacterium glucuronolyticum (isolates:11; rSTs:6 tree)
          • Corynebacterium glutamicum (isolates:79; rSTs:42 tree)
          • Corynebacterium glyciniphilum (isolates:2; rSTs:2)
          • Corynebacterium godavarianum (isolates:2; rSTs:1)
          • Corynebacterium gottingense (isolates:3; rSTs:2)
          • Corynebacterium guangdongense (isolates:2; rSTs:1)
          • Corynebacterium guaraldiae (isolates:5; rSTs:4 tree)
          • Corynebacterium hadale (isolates:2; rSTs:1)
          • Corynebacterium haemomassiliense (isolates:1; rSTs:1)
          • Corynebacterium halotolerans (isolates:2; rSTs:1)
          • Corynebacterium hansenii (isolates:1; rSTs:1)
          • Corynebacterium heidelbergense (isolates:3; rSTs:2)
          • Corynebacterium hesseae (isolates:3; rSTs:3 tree)
          • Corynebacterium hindlerae (isolates:3; rSTs:3 tree)
          • Corynebacterium hiratae (isolates:1; rSTs:1)
          • Corynebacterium humireducens (isolates:2; rSTs:1)
          • Corynebacterium hylobatis (isolates:1; rSTs:1)
          • Corynebacterium ihumii (isolates:2; rSTs:1)
          • Corynebacterium imitans (isolates:6; rSTs:3 tree)
          • Corynebacterium incognita (isolates:1; rSTs:1)
          • Corynebacterium intestinale (isolates:2; rSTs:1)
          • Corynebacterium jeddahense (isolates:2; rSTs:1)
          • Corynebacterium jeikeium (isolates:10; rSTs:7 tree)
          • Corynebacterium kalidii (isolates:1; rSTs:1)
          • Corynebacterium kalinowskii (isolates:1; rSTs:1)
          • Corynebacterium kefirresidentii (isolates:13; rSTs:12 tree)
          • Corynebacterium kroppenstedtii (isolates:2; rSTs:1)
          • Corynebacterium kutscheri (isolates:4; rSTs:3 tree)
          • Corynebacterium lactis (isolates:2; rSTs:2)
          • Corynebacterium lehmanniae (isolates:2; rSTs:2)
          • Corynebacterium lemuris (isolates:1; rSTs:1)
          • Corynebacterium liangguodongii (isolates:2; rSTs:1)
          • Corynebacterium lipophiloflavum (isolates:1; rSTs:1)
          • Corynebacterium lipophilum (isolates:2; rSTs:1)
          • Corynebacterium lizhenjunii (isolates:2; rSTs:2)
          • Corynebacterium lowii (isolates:2; rSTs:1)
          • Corynebacterium lubricantis (isolates:1; rSTs:1)
          • Corynebacterium lujinxingii (isolates:3; rSTs:1)
          • Corynebacterium macclintockiae (isolates:3; rSTs:3 tree)
          • Corynebacterium macginleyi (isolates:26; rSTs:24 tree)
          • Corynebacterium marambiense (isolates:3; rSTs:2)
          • Corynebacterium marinum (isolates:2; rSTs:1)
          • Corynebacterium maris (isolates:1; rSTs:1)
          • Corynebacterium marquesiae (isolates:17; rSTs:12 tree)
          • Corynebacterium massiliense (isolates:3; rSTs:1)
          • Corynebacterium mastitidis (isolates:10; rSTs:5 tree)
          • Corynebacterium matruchotii (isolates:6; rSTs:3 tree)
          • Corynebacterium megadyptis (isolates:2; rSTs:2)
          • Corynebacterium meitnerae (isolates:1; rSTs:1)
          • Corynebacterium mendelii (isolates:1)
          • Corynebacterium meridianum (isolates:2; rSTs:2)
          • Corynebacterium minutissimum (isolates:10; rSTs:2)
          • Corynebacterium mucifaciens (isolates:2; rSTs:1)
          • Corynebacterium mustelae (isolates:1; rSTs:1)
          • Corynebacterium mycetoides (isolates:1; rSTs:1)
          • Corynebacterium neomassiliense (isolates:1; rSTs:1)
          • Corynebacterium nuruki (isolates:2; rSTs:1)
          • Corynebacterium occultum (isolates:1; rSTs:1)
          • Corynebacterium oculi (isolates:1; rSTs:1)
          • Corynebacterium otitidis (isolates:3; rSTs:2)
          • Corynebacterium pacaense (isolates:1; rSTs:1)
          • Corynebacterium parakroppenstedtii (isolates:32; rSTs:16 tree)
          • Corynebacterium pelargi (isolates:2; rSTs:1)
          • Corynebacterium phocae (isolates:2; rSTs:1)
          • Corynebacterium phoceense (isolates:9; rSTs:9 tree)
          • Corynebacterium pilbarense (isolates:2; rSTs:1)
          • Corynebacterium pilosum (isolates:3; rSTs:1)
          • Corynebacterium pollutisoli (isolates:1; rSTs:1)
          • Corynebacterium poyangense (isolates:2; rSTs:2)
          • Corynebacterium propinquum (isolates:40; rSTs:24 tree)
          • Corynebacterium provencense (isolates:2; rSTs:1)
          • Corynebacterium pseudodiphtheriticum (isolates:58; rSTs:37 tree)
          • Corynebacterium pseudokroppenstedtii (isolates:7; rSTs:5 tree)
          • Corynebacterium pseudopelargi (isolates:1; rSTs:1)
          • Corynebacterium pseudotuberculosis (isolates:212; rSTs:44 tree)
          • Corynebacterium pygosceleis (isolates:5; rSTs:4 tree)
          • Corynebacterium pyruviciproducens (isolates:9; rSTs:5 tree)
          • Corynebacterium qintianiae (isolates:2; rSTs:2)
          • Corynebacterium ramonii (isolates:1; rSTs:1)
          • Corynebacterium renale (isolates:5; rSTs:4 tree)
          • Corynebacterium resistens (isolates:1; rSTs:1)
          • Corynebacterium riegelii (isolates:5; rSTs:4 tree)
          • Corynebacterium rouxii (isolates:5; rSTs:3 tree)
          • Corynebacterium sanguinis (isolates:34; rSTs:30 tree)
          • Corynebacterium segmentosum (isolates:1; rSTs:1)
          • Corynebacterium senegalense (isolates:1; rSTs:1)
          • Corynebacterium silvaticum (isolates:15; rSTs:6 tree)
          • Corynebacterium simulans (isolates:7; rSTs:7 tree)
          • Corynebacterium singulare (isolates:3; rSTs:2)
          • Corynebacterium sp. (isolates:310; rSTs:287 tree)
          • Corynebacterium sphenisci (isolates:1; rSTs:1)
          • Corynebacterium spheniscorum (isolates:2; rSTs:1)
          • Corynebacterium sputi (isolates:1; rSTs:1)
          • Corynebacterium stationis (isolates:8; rSTs:8 tree)
          • Corynebacterium stercoris (isolates:1)
          • Corynebacterium striatum (isolates:347; rSTs:129 tree)
          • Corynebacterium suedekumii (isolates:1; rSTs:1)
          • Corynebacterium suicordis (isolates:2; rSTs:1)
          • Corynebacterium suranareeae (isolates:1; rSTs:1)
          • Corynebacterium tapiri (isolates:1; rSTs:1)
          • Corynebacterium terpenotabidum (isolates:1; rSTs:1)
          • Corynebacterium testudinoris (isolates:2; rSTs:2)
          • Corynebacterium timonense (isolates:2; rSTs:1)
          • Corynebacterium tuberculostearicum (isolates:19; rSTs:18 tree)
          • Corynebacterium tuscaniense (isolates:3; rSTs:2)
          • Corynebacterium uberis (isolates:6; rSTs:3 tree)
          • Corynebacterium ulcerans (isolates:36; rSTs:30 tree)
          • Corynebacterium ulceribovis (isolates:1; rSTs:1)
          • Corynebacterium urealyticum (isolates:11; rSTs:8 tree)
          • Corynebacterium ureicelerivorans (isolates:3; rSTs:3 tree)
          • Corynebacterium urinipleomorphum (isolates:1; rSTs:1)
          • Corynebacterium urogenitale (isolates:1; rSTs:1)
          • Corynebacterium uropygiale (isolates:1; rSTs:1)
          • Corynebacterium uterequi (isolates:1; rSTs:1)
          • Corynebacterium variabile (isolates:3; rSTs:3 tree)
          • Corynebacterium vitaeruminis (isolates:2; rSTs:2)
          • Corynebacterium wankanglinii (isolates:3; rSTs:3 tree)
          • Corynebacterium xerosis (isolates:5; rSTs:5 tree)
          • Corynebacterium yonathiae (isolates:2; rSTs:2)
          • Corynebacterium yudongzhengii (isolates:2; rSTs:1)
          • Corynebacterium zhongnanshanii (isolates:2; rSTs:2)
      • Dietziaceae (isolates:65; rSTs:46 tree)
        • Dietzia (isolates:65; rSTs:46 tree)
          • Dietzia aerolata (isolates:1; rSTs:1)
          • Dietzia alimentaria (isolates:1; rSTs:1)
          • Dietzia aurantiaca (isolates:2; rSTs:2)
          • Dietzia cercidiphylli (isolates:3; rSTs:2)
          • Dietzia cinnamea (isolates:3; rSTs:2)
          • Dietzia kunjamensis (isolates:7; rSTs:4 tree)
          • Dietzia lutea (isolates:2; rSTs:1)
          • Dietzia maris (isolates:7; rSTs:5 tree)
          • Dietzia natronolimnaea (isolates:1; rSTs:1)
          • Dietzia papillomatosis (isolates:1; rSTs:1)
          • Dietzia psychralcaliphila (isolates:4; rSTs:2)
          • Dietzia sp. (isolates:31; rSTs:22 tree)
          • Dietzia timorensis (isolates:2; rSTs:2)
      • Gordoniaceae (isolates:222; rSTs:182 tree)
        • Gordonia (isolates:218; rSTs:179 tree)
          • Gordonia aichiensis (isolates:1; rSTs:1)
          • Gordonia alkaliphila (isolates:2; rSTs:2)
          • Gordonia alkanivorans (isolates:18; rSTs:15 tree)
          • Gordonia amarae (isolates:5; rSTs:2)
          • Gordonia amicalis (isolates:15; rSTs:13 tree)
          • Gordonia araii (isolates:2; rSTs:1)
          • Gordonia asplenii (isolates:1; rSTs:1)
          • Gordonia bronchialis (isolates:6; rSTs:3 tree)
          • Gordonia caeni (isolates:1; rSTs:1)
          • Gordonia crocea (isolates:1; rSTs:1)
          • Gordonia defluvii (isolates:1; rSTs:1)
          • Gordonia desulfuricans (isolates:2; rSTs:1)
          • Gordonia effusa (isolates:1; rSTs:1)
          • Gordonia hankookensis (isolates:2; rSTs:1)
          • Gordonia hirsuta (isolates:3; rSTs:1)
          • Gordonia hongkongensis (isolates:4; rSTs:4 tree)
          • Gordonia humi (isolates:2; rSTs:1)
          • Gordonia hydrophobica (isolates:3; rSTs:1)
          • Gordonia insulae (isolates:1; rSTs:1)
          • Gordonia iterans (isolates:1; rSTs:1)
          • Gordonia jacobaea (isolates:2; rSTs:2)
          • Gordonia jinghuaiqii (isolates:3; rSTs:2)
          • Gordonia jinhuaensis (isolates:1; rSTs:1)
          • Gordonia lacunae (isolates:1; rSTs:1)
          • Gordonia liuliyuniae (isolates:2; rSTs:2)
          • Gordonia malaquae (isolates:6; rSTs:5 tree)
          • Gordonia mangrovi (isolates:2; rSTs:1)
          • Gordonia metallireducens (isolates:1; rSTs:1)
          • Gordonia namibiensis (isolates:1; rSTs:1)
          • Gordonia neofelifaecis (isolates:1; rSTs:1)
          • Gordonia oryzae (isolates:1; rSTs:1)
          • Gordonia otitidis (isolates:2; rSTs:2)
          • Gordonia paraffinivorans (isolates:14; rSTs:13 tree)
          • Gordonia phthalatica (isolates:1; rSTs:1)
          • Gordonia polyisoprenivorans (isolates:12; rSTs:8 tree)
          • Gordonia prachuapensis (isolates:1; rSTs:1)
          • Gordonia pseudamarae (isolates:2; rSTs:2)
          • Gordonia rhizosphera (isolates:1; rSTs:1)
          • Gordonia rubripertincta (isolates:8; rSTs:6 tree)
          • Gordonia sedimidis (isolates:1; rSTs:1)
          • Gordonia sesuvii (isolates:1; rSTs:1)
          • Gordonia shandongensis (isolates:1; rSTs:1)
          • Gordonia sihwensis (isolates:4; rSTs:3 tree)
          • Gordonia soli (isolates:1; rSTs:1)
          • Gordonia sp. (isolates:56; rSTs:52 tree)
          • Gordonia spumicola (isolates:1; rSTs:1)
          • Gordonia sputi (isolates:4; rSTs:3 tree)
          • Gordonia tangerina (isolates:1; rSTs:1)
          • Gordonia terrae (isolates:9; rSTs:5 tree)
          • Gordonia westfalica (isolates:2; rSTs:2)
          • Gordonia zhaorongruii (isolates:2; rSTs:2)
          • Gordonia zhenghanii (isolates:1; rSTs:1)
        • Jongsikchunia (isolates:1; rSTs:1)
          • Jongsikchunia kroppenstedtii (isolates:1; rSTs:1)
        • Millisia (isolates:1; rSTs:1)
          • Millisia brevis (isolates:1; rSTs:1)
        • Skermania (isolates:2; rSTs:1)
          • Skermania piniformis (isolates:2; rSTs:1)
      • Hoyosellaceae (isolates:9; rSTs:7 tree)
        • Hoyosella (isolates:6; rSTs:4 tree)
          • Hoyosella altamirensis (isolates:2; rSTs:1)
          • Hoyosella rhizosphaerae (isolates:2; rSTs:1)
          • Hoyosella sp. (isolates:1; rSTs:1)
          • Hoyosella subflava (isolates:1; rSTs:1)
        • Lolliginicoccus (isolates:3; rSTs:3 tree)
          • Lolliginicoccus lacisalsi (isolates:1; rSTs:1)
          • Lolliginicoccus levis (isolates:1; rSTs:1)
          • Lolliginicoccus suaedae (isolates:1; rSTs:1)
      • Lawsonellaceae (isolates:4; rSTs:4 tree)
        • Lawsonella (isolates:4; rSTs:4 tree)
          • Lawsonella clevelandensis (isolates:4; rSTs:4 tree)
      • Mycobacteriaceae (isolates:16684; rSTs:3232)
        • Mycobacterium (isolates:13811; rSTs:2465)
          • Candidatus Mycobacterium methanotrophicum (isolates:2; rSTs:1)
          • Candidatus Mycobacterium wuenschmannii (isolates:1; rSTs:1)
          • Mycobacterium adipatum (isolates:1; rSTs:1)
          • Mycobacterium ahvazicum (isolates:1; rSTs:1)
          • Mycobacterium alsense (isolates:4; rSTs:1)
          • Mycobacterium angelicum (isolates:2; rSTs:1)
          • Mycobacterium aquaticum (isolates:1; rSTs:1)
          • Mycobacterium arosiense (isolates:1; rSTs:1)
          • Mycobacterium asiaticum (isolates:9; rSTs:8 tree)
          • Mycobacterium attenuatum (isolates:3; rSTs:3 tree)
          • Mycobacterium avium (isolates:399; rSTs:93 tree)
          • Mycobacterium basiliense (isolates:1; rSTs:1)
          • Mycobacterium bohemicum (isolates:3; rSTs:1)
          • Mycobacterium botniense (isolates:1; rSTs:1)
          • Mycobacterium bouchedurhonense (isolates:2; rSTs:1)
          • Mycobacterium bourgelatii (isolates:2; rSTs:1)
          • Mycobacterium branderi (isolates:3; rSTs:1)
          • Mycobacterium canetti (isolates:36; rSTs:18 tree)
          • Mycobacterium celatum (isolates:3; rSTs:1)
          • Mycobacterium colombiense (isolates:5; rSTs:3 tree)
          • Mycobacterium conspicuum (isolates:3; rSTs:2)
          • Mycobacterium cookii (isolates:2; rSTs:1)
          • Mycobacterium decipiens (isolates:2; rSTs:1)
          • Mycobacterium dioxanotrophicus (isolates:1; rSTs:1)
          • Mycobacterium europaeum (isolates:3; rSTs:3 tree)
          • Mycobacterium florentinum (isolates:3; rSTs:1)
          • Mycobacterium fragae (isolates:3; rSTs:1)
          • Mycobacterium gastri (isolates:1; rSTs:1)
          • Mycobacterium genavense (isolates:1; rSTs:1)
          • Mycobacterium gordonae (isolates:6; rSTs:3 tree)
          • Mycobacterium haemophilum (isolates:6; rSTs:2)
          • Mycobacterium heckeshornense (isolates:5; rSTs:3 tree)
          • Mycobacterium heidelbergense (isolates:3; rSTs:1)
          • Mycobacterium helveticum (isolates:2; rSTs:1)
          • Mycobacterium innocens (isolates:1; rSTs:1)
          • Mycobacterium interjectum (isolates:2; rSTs:1)
          • Mycobacterium intermedium (isolates:4; rSTs:1)
          • Mycobacterium intracellulare (isolates:101; rSTs:43 tree)
          • Mycobacterium kansasii (isolates:40; rSTs:20 tree)
          • Mycobacterium kiyosense (isolates:15; rSTs:3 tree)
          • Mycobacterium kubicae (isolates:8; rSTs:4 tree)
          • Mycobacterium kyogaense (isolates:1; rSTs:1)
          • Mycobacterium kyorinense (isolates:4; rSTs:2)
          • Mycobacterium lacus (isolates:4; rSTs:1)
          • Mycobacterium lehmannii (isolates:2; rSTs:2)
          • Mycobacterium lentiflavum (isolates:2; rSTs:2)
          • Mycobacterium leprae (isolates:13; rSTs:4 tree)
          • Mycobacterium lepraemurium (isolates:1; rSTs:1)
          • Mycobacterium lepromatosis (isolates:2; rSTs:2)
          • Mycobacterium liflandii (isolates:2; rSTs:2)
          • Mycobacterium malmoense (isolates:4; rSTs:2)
          • Mycobacterium mantenii (isolates:7; rSTs:5 tree)
          • Mycobacterium marinum (isolates:42; rSTs:11 tree)
          • Mycobacterium marseillense (isolates:8; rSTs:6 tree)
          • Mycobacterium montefiorense (isolates:10; rSTs:2)
          • Mycobacterium nebraskense (isolates:4; rSTs:2)
          • Mycobacterium neglectum (isolates:1; rSTs:1)
          • Mycobacterium neumannii (isolates:1; rSTs:1)
          • Mycobacterium noviomagense (isolates:3; rSTs:1)
          • Mycobacterium novum (isolates:1; rSTs:1)
          • Mycobacterium numidiamassiliense (isolates:1; rSTs:1)
          • Mycobacterium ostraviense (isolates:3; rSTs:2)
          • Mycobacterium palustre (isolates:2; rSTs:1)
          • Mycobacterium paraense (isolates:5; rSTs:3 tree)
          • Mycobacterium paraffinicum (isolates:1; rSTs:1)
          • Mycobacterium paragordonae (isolates:7; rSTs:5 tree)
          • Mycobacterium paraintracellulare (isolates:14; rSTs:10 tree)
          • Mycobacterium parascrofulaceum (isolates:1; rSTs:1)
          • Mycobacterium paraseoulense (isolates:3; rSTs:2)
          • Mycobacterium paraterrae (isolates:1; rSTs:1)
          • Mycobacterium parmense (isolates:3; rSTs:1)
          • Mycobacterium persicum (isolates:9; rSTs:9 tree)
          • Mycobacterium pinniadriaticum (isolates:2; rSTs:1)
          • Mycobacterium pseudokansasii (isolates:3; rSTs:2)
          • Mycobacterium pseudoshottsii (isolates:6; rSTs:3 tree)
          • Mycobacterium rhizamassiliense (isolates:1; rSTs:1)
          • Mycobacterium riyadhense (isolates:12; rSTs:6 tree)
          • Mycobacterium saskatchewanense (isolates:2; rSTs:1)
          • Mycobacterium scrofulaceum (isolates:1; rSTs:1)
          • Mycobacterium senriense (isolates:1; rSTs:1)
          • Mycobacterium seoulense (isolates:2; rSTs:1)
          • Mycobacterium sherrisii (isolates:4; rSTs:4 tree)
          • Mycobacterium shigaense (isolates:4; rSTs:3 tree)
          • Mycobacterium shimoidei (isolates:4; rSTs:2)
          • Mycobacterium shinjukuense (isolates:4; rSTs:2)
          • Mycobacterium shottsii (isolates:2; rSTs:1)
          • Mycobacterium simiae (isolates:5; rSTs:4 tree)
          • Mycobacterium simulans (isolates:2; rSTs:2)
          • Mycobacterium sp. (isolates:95; rSTs:145 tree)
          • Mycobacterium spongiae (isolates:1; rSTs:1)
          • Mycobacterium stomatepiae (isolates:1; rSTs:1)
          • Mycobacterium syngnathidarum (isolates:2; rSTs:2)
          • Mycobacterium szulgai (isolates:2; rSTs:1)
          • Mycobacterium talmoniae (isolates:2; rSTs:1)
          • Mycobacterium terramassiliense (isolates:1; rSTs:1)
          • Mycobacterium tilburgii (isolates:1; rSTs:1)
          • Mycobacterium timonense (isolates:1; rSTs:1)
          • Mycobacterium triplex (isolates:2; rSTs:1)
          • Mycobacterium tuberculosis (isolates:12451; rSTs:1930)
          • Mycobacterium uberis (isolates:1; rSTs:1)
          • Mycobacterium ulcerans (isolates:333; rSTs:15 tree)
          • Mycobacterium vicinigordonae (isolates:1; rSTs:1)
          • Mycobacterium xenopi (isolates:7; rSTs:6 tree)
          • Mycobacterium yunnanensis (isolates:1; rSTs:1)
        • Mycobacteroides (isolates:2299; rSTs:459 tree)
          • Mycobacteroides abscessus (isolates:2176; rSTs:406 tree)
          • Mycobacteroides chelonae (isolates:61; rSTs:29 tree)
          • Mycobacteroides franklinii (isolates:12; rSTs:5 tree)
          • Mycobacteroides immunogenum (isolates:19; rSTs:4 tree)
          • Mycobacteroides salmoniphilum (isolates:10; rSTs:7 tree)
          • Mycobacteroides saopaulense (isolates:4; rSTs:3 tree)
          • Mycobacteroides sp. (isolates:16; rSTs:4 tree)
          • [Mycobacterium] stephanolepidis (isolates:1; rSTs:1)
        • Mycolicibacillus (isolates:8; rSTs:4 tree)
          • Mycolicibacillus koreensis (isolates:4; rSTs:2)
          • Mycolicibacillus parakoreensis (isolates:2; rSTs:1)
          • Mycolicibacillus trivialis (isolates:2; rSTs:1)
        • Mycolicibacter (isolates:40; rSTs:32 tree)
          • Mycolicibacter acidiphilus (isolates:1; rSTs:1)
          • Mycolicibacter algericus (isolates:3; rSTs:1)
          • Mycolicibacter arupensis (isolates:4; rSTs:3 tree)
          • Mycolicibacter engbaekii (isolates:1; rSTs:1)
          • Mycolicibacter heraklionensis (isolates:2; rSTs:2)
          • Mycolicibacter hiberniae (isolates:3; rSTs:1)
          • Mycolicibacter icosiumassiliensis (isolates:1; rSTs:1)
          • Mycolicibacter kumamotonensis (isolates:3; rSTs:3 tree)
          • Mycolicibacter longobardus (isolates:2; rSTs:2)
          • Mycolicibacter minnesotensis (isolates:3; rSTs:1)
          • Mycolicibacter nonchromogenicus (isolates:1; rSTs:1)
          • Mycolicibacter senuensis (isolates:2; rSTs:1)
          • Mycolicibacter sinensis (isolates:1; rSTs:1)
          • Mycolicibacter sp. (isolates:2; rSTs:10 tree)
          • Mycolicibacter terrae (isolates:4; rSTs:1)
          • Mycolicibacter virginiensis (isolates:2; rSTs:2)
          • [Mycobacterium] crassicus (isolates:1)
          • [Mycobacterium] nativiensis (isolates:1)
          • [Mycobacterium] vasticus (isolates:1)
          • [Mycobacterium] zoologicum (isolates:2)
        • Mycolicibacterium (isolates:526; rSTs:272 tree)
          • Candidatus Mycolicibacterium alkanivorans (isolates:1; rSTs:1)
          • Mycolicibacterium acapulense (isolates:4; rSTs:4 tree)
          • Mycolicibacterium agri (isolates:2; rSTs:2)
          • Mycolicibacterium aichiense (isolates:3; rSTs:1)
          • Mycolicibacterium alvei (isolates:3; rSTs:1)
          • Mycolicibacterium anyangense (isolates:1; rSTs:1)
          • Mycolicibacterium arabiense (isolates:2; rSTs:1)
          • Mycolicibacterium arenosum (isolates:1; rSTs:1)
          • Mycolicibacterium aromaticivorans (isolates:1; rSTs:1)
          • Mycolicibacterium arseniciresistens (isolates:1)
          • Mycolicibacterium aubagnense (isolates:2; rSTs:1)
          • Mycolicibacterium aurantiacum (isolates:1; rSTs:1)
          • Mycolicibacterium aurum (isolates:3; rSTs:1)
          • Mycolicibacterium austroafricanum (isolates:2; rSTs:1)
          • Mycolicibacterium bacteremicum (isolates:2; rSTs:1)
          • Mycolicibacterium baixiangningiae (isolates:3; rSTs:2)
          • Mycolicibacterium boenickei (isolates:4; rSTs:1)
          • Mycolicibacterium brisbanense (isolates:2; rSTs:1)
          • Mycolicibacterium brumae (isolates:5; rSTs:1)
          • Mycolicibacterium canariasense (isolates:4; rSTs:1)
          • Mycolicibacterium celeriflavum (isolates:4; rSTs:2)
          • Mycolicibacterium chitae (isolates:3; rSTs:1)
          • Mycolicibacterium chlorophenolicum (isolates:2; rSTs:1)
          • Mycolicibacterium chubuense (isolates:3; rSTs:1)
          • Mycolicibacterium conceptionense (isolates:11; rSTs:6 tree)
          • Mycolicibacterium confluentis (isolates:3; rSTs:1)
          • Mycolicibacterium cosmeticum (isolates:4; rSTs:2)
          • Mycolicibacterium crocinum (isolates:2; rSTs:1)
          • Mycolicibacterium diernhoferi (isolates:6; rSTs:2)
          • Mycolicibacterium doricum (isolates:3; rSTs:2)
          • Mycolicibacterium duvalii (isolates:3; rSTs:1)
          • Mycolicibacterium elephantis (isolates:7; rSTs:3 tree)
          • Mycolicibacterium fallax (isolates:3; rSTs:1)
          • Mycolicibacterium farcinogenes (isolates:1; rSTs:1)
          • Mycolicibacterium flavescens (isolates:2; rSTs:1)
          • Mycolicibacterium fluoranthenivorans (isolates:4; rSTs:3 tree)
          • Mycolicibacterium fortuitum (isolates:56; rSTs:26 tree)
          • Mycolicibacterium frederiksbergense (isolates:3; rSTs:3 tree)
          • Mycolicibacterium gadium (isolates:2; rSTs:2)
          • Mycolicibacterium gilvum (isolates:4; rSTs:3 tree)
          • Mycolicibacterium goodii (isolates:7; rSTs:6 tree)
          • Mycolicibacterium grossiae (isolates:2; rSTs:1)
          • Mycolicibacterium hassiacum (isolates:4; rSTs:1)
          • Mycolicibacterium helvum (isolates:2; rSTs:1)
          • Mycolicibacterium hippocampi (isolates:2; rSTs:1)
          • Mycolicibacterium hodleri (isolates:3; rSTs:3 tree)
          • Mycolicibacterium holsaticum (isolates:4; rSTs:2)
          • Mycolicibacterium houstonense (isolates:2; rSTs:1)
          • Mycolicibacterium insubricum (isolates:3; rSTs:1)
          • Mycolicibacterium iranicum (isolates:4; rSTs:4 tree)
          • Mycolicibacterium komanii (isolates:1; rSTs:1)
          • Mycolicibacterium komossense (isolates:1; rSTs:1)
          • Mycolicibacterium lacusdiani (isolates:1; rSTs:1)
          • Mycolicibacterium litorale (isolates:4; rSTs:2)
          • Mycolicibacterium llatzerense (isolates:5; rSTs:4 tree)
          • Mycolicibacterium lutetiense (isolates:1; rSTs:1)
          • Mycolicibacterium madagascariense (isolates:2; rSTs:1)
          • Mycolicibacterium mageritense (isolates:4; rSTs:2)
          • Mycolicibacterium malmesburyense (isolates:1; rSTs:1)
          • Mycolicibacterium mengxianglii (isolates:2; rSTs:2)
          • Mycolicibacterium monacense (isolates:6; rSTs:3 tree)
          • Mycolicibacterium moriokaense (isolates:3; rSTs:1)
          • Mycolicibacterium mucogenicum (isolates:4; rSTs:2)
          • Mycolicibacterium murale (isolates:3; rSTs:1)
          • Mycolicibacterium neoaurum (isolates:12; rSTs:5 tree)
          • Mycolicibacterium neworleansense (isolates:2; rSTs:2)
          • Mycolicibacterium nivoides (isolates:1; rSTs:1)
          • Mycolicibacterium novocastrense (isolates:5; rSTs:2)
          • Mycolicibacterium obuense (isolates:3; rSTs:3 tree)
          • Mycolicibacterium palauense (isolates:1; rSTs:1)
          • Mycolicibacterium pallens (isolates:2; rSTs:1)
          • Mycolicibacterium parafortuitum (isolates:4; rSTs:3 tree)
          • Mycolicibacterium peregrinum (isolates:9; rSTs:6 tree)
          • Mycolicibacterium phlei (isolates:10; rSTs:4 tree)
          • Mycolicibacterium phocaicum (isolates:3; rSTs:2)
          • Mycolicibacterium porcinum (isolates:7; rSTs:5 tree)
          • Mycolicibacterium poriferae (isolates:3; rSTs:1)
          • Mycolicibacterium psychrotolerans (isolates:2; rSTs:1)
          • Mycolicibacterium pulveris (isolates:2; rSTs:1)
          • Mycolicibacterium pyrenivorans (isolates:1; rSTs:1)
          • Mycolicibacterium rhodesiae (isolates:2; rSTs:1)
          • Mycolicibacterium rufum (isolates:3; rSTs:1)
          • Mycolicibacterium rutilum (isolates:1; rSTs:1)
          • Mycolicibacterium sarraceniae (isolates:1; rSTs:1)
          • Mycolicibacterium sediminis (isolates:3; rSTs:1)
          • Mycolicibacterium senegalense (isolates:2; rSTs:1)
          • Mycolicibacterium septicum (isolates:5; rSTs:5 tree)
          • Mycolicibacterium setense (isolates:5; rSTs:2)
          • Mycolicibacterium smegmatis (isolates:113; rSTs:19 tree)
          • Mycolicibacterium sp. (isolates:55; rSTs:53 tree)
          • Mycolicibacterium sphagni (isolates:1; rSTs:1)
          • Mycolicibacterium stellerae (isolates:1; rSTs:1)
          • Mycolicibacterium thermoresistibile (isolates:4; rSTs:1)
          • Mycolicibacterium tokaiense (isolates:2; rSTs:1)
          • Mycolicibacterium tusciae (isolates:1; rSTs:1)
          • Mycolicibacterium vaccae (isolates:3; rSTs:1)
          • Mycolicibacterium vanbaalenii (isolates:5; rSTs:4 tree)
          • Mycolicibacterium vinylchloridicum (isolates:1; rSTs:1)
          • Mycolicibacterium vulneris (isolates:1; rSTs:1)
          • Mycolicibacterium wolinskyi (isolates:3; rSTs:2)
          • Mycolicibacterium xanthum (isolates:1; rSTs:1)
          • [Mycobacterium] fortunisiensis (isolates:1; rSTs:1)
          • [Mycobacterium] manitobense (isolates:1; rSTs:1)
      • Nocardiaceae (isolates:1657; rSTs:1014 tree)
        • Aldersonia (isolates:2; rSTs:2)
          • Aldersonia kunmingensis (isolates:1; rSTs:1)
          • Aldersonia sp. (isolates:1; rSTs:1)
        • Antrihabitans (isolates:3; rSTs:3 tree)
          • Antrihabitans sp. (isolates:1; rSTs:1)
          • Antrihabitans stalactiti (isolates:1; rSTs:1)
          • Antrihabitans stalagmiti (isolates:1; rSTs:1)
        • Nocardia (isolates:574; rSTs:414 tree)
          • Nocardia abscessus (isolates:13; rSTs:6 tree)
          • Nocardia acididurans (isolates:1; rSTs:1)
          • Nocardia acidivorans (isolates:1; rSTs:1)
          • Nocardia africana (isolates:3; rSTs:1)
          • Nocardia alba (isolates:2; rSTs:1)
          • Nocardia albiluteola (isolates:1; rSTs:1)
          • Nocardia alni (isolates:1; rSTs:1)
          • Nocardia altamirensis (isolates:1; rSTs:1)
          • Nocardia amamiensis (isolates:3; rSTs:3 tree)
          • Nocardia amikacinitolerans (isolates:6; rSTs:5 tree)
          • Nocardia anaemiae (isolates:1; rSTs:1)
          • Nocardia aobensis (isolates:1; rSTs:1)
          • Nocardia araoensis (isolates:1; rSTs:1)
          • Nocardia arizonensis (isolates:4; rSTs:1)
          • Nocardia arthritidis (isolates:1; rSTs:1)
          • Nocardia asiatica (isolates:4; rSTs:3 tree)
          • Nocardia asteroides (isolates:9; rSTs:5 tree)
          • Nocardia aurantia (isolates:1; rSTs:1)
          • Nocardia aurantiaca (isolates:1; rSTs:1)
          • Nocardia aurea (isolates:3; rSTs:2)
          • Nocardia australiensis (isolates:1; rSTs:1)
          • Nocardia barduliensis (isolates:1; rSTs:1)
          • Nocardia beijingensis (isolates:7; rSTs:7 tree)
          • Nocardia bhagyanarayanae (isolates:1; rSTs:1)
          • Nocardia blacklockiae (isolates:1; rSTs:1)
          • Nocardia bovistercoris (isolates:1; rSTs:1)
          • Nocardia brasiliensis (isolates:18; rSTs:11 tree)
          • Nocardia brevicatena (isolates:1; rSTs:1)
          • Nocardia caishijiensis (isolates:2; rSTs:1)
          • Nocardia callitridis (isolates:1; rSTs:1)
          • Nocardia camponoti (isolates:1; rSTs:1)
          • Nocardia canadensis (isolates:1; rSTs:1)
          • Nocardia carnea (isolates:2; rSTs:1)
          • Nocardia cerradoensis (isolates:3; rSTs:2)
          • Nocardia coffeae (isolates:1; rSTs:1)
          • Nocardia colli (isolates:1; rSTs:1)
          • Nocardia concava (isolates:1; rSTs:1)
          • Nocardia coubleae (isolates:2; rSTs:1)
          • Nocardia crassostreae (isolates:1; rSTs:1)
          • Nocardia cyriacigeorgica (isolates:82; rSTs:50 tree)
          • Nocardia donostiensis (isolates:3; rSTs:2)
          • Nocardia elegans (isolates:2; rSTs:2)
          • Nocardia exalbida (isolates:1; rSTs:1)
          • Nocardia farcinica (isolates:66; rSTs:47 tree)
          • Nocardia flavorosea (isolates:3; rSTs:2)
          • Nocardia fluminea (isolates:8; rSTs:7 tree)
          • Nocardia fusca (isolates:2; rSTs:2)
          • Nocardia gamkensis (isolates:4; rSTs:2)
          • Nocardia gipuzkoensis (isolates:4; rSTs:3 tree)
          • Nocardia goodfellowii (isolates:1; rSTs:1)
          • Nocardia grenadensis (isolates:1; rSTs:1)
          • Nocardia harenae (isolates:1; rSTs:1)
          • Nocardia higoensis (isolates:1; rSTs:1)
          • Nocardia huaxiensis (isolates:2; rSTs:2)
          • Nocardia ignorata (isolates:2; rSTs:1)
          • Nocardia implantans (isolates:2; rSTs:1)
          • Nocardia inohanensis (isolates:1; rSTs:1)
          • Nocardia iowensis (isolates:3; rSTs:1)
          • Nocardia jejuensis (isolates:2; rSTs:1)
          • Nocardia jiangxiensis (isolates:1; rSTs:1)
          • Nocardia jinanensis (isolates:3; rSTs:1)
          • Nocardia kruczakiae (isolates:2; rSTs:2)
          • Nocardia lijiangensis (isolates:2; rSTs:1)
          • Nocardia macrotermitis (isolates:1; rSTs:1)
          • Nocardia mangyaensis (isolates:2; rSTs:2)
          • Nocardia mexicana (isolates:2; rSTs:1)
          • Nocardia mikamii (isolates:1; rSTs:1)
          • Nocardia miyunensis (isolates:1; rSTs:1)
          • Nocardia neocaledoniensis (isolates:6; rSTs:4 tree)
          • Nocardia niigatensis (isolates:1; rSTs:1)
          • Nocardia ninae (isolates:2; rSTs:1)
          • Nocardia niwae (isolates:3; rSTs:3 tree)
          • Nocardia noduli (isolates:1; rSTs:1)
          • Nocardia nova (isolates:8; rSTs:8 tree)
          • Nocardia otitidiscaviarum (isolates:10; rSTs:7 tree)
          • Nocardia panacis (isolates:1; rSTs:1)
          • Nocardia paucivorans (isolates:1; rSTs:1)
          • Nocardia pneumoniae (isolates:1; rSTs:1)
          • Nocardia pseudobrasiliensis (isolates:3; rSTs:1)
          • Nocardia pseudovaccinii (isolates:1; rSTs:1)
          • Nocardia pulmonis (isolates:1; rSTs:1)
          • Nocardia puris (isolates:6; rSTs:3 tree)
          • Nocardia rhamnosiphila (isolates:9; rSTs:5 tree)
          • Nocardia rhizosphaerihabitans (isolates:1; rSTs:1)
          • Nocardia rosealba (isolates:1; rSTs:1)
          • Nocardia salmonicida (isolates:12; rSTs:12 tree)
          • Nocardia seriolae (isolates:26; rSTs:10 tree)
          • Nocardia shimofusensis (isolates:1; rSTs:1)
          • Nocardia sienata (isolates:1; rSTs:1)
          • Nocardia sp. (isolates:96; rSTs:90 tree)
          • Nocardia speluncae (isolates:2; rSTs:1)
          • Nocardia spumae (isolates:2; rSTs:1)
          • Nocardia sputi (isolates:2; rSTs:2)
          • Nocardia sputorum (isolates:2; rSTs:2)
          • Nocardia stercoris (isolates:1; rSTs:1)
          • Nocardia suismassiliense (isolates:1; rSTs:1)
          • Nocardia takedensis (isolates:1; rSTs:1)
          • Nocardia tenerifensis (isolates:2; rSTs:1)
          • Nocardia tengchongensis (isolates:3; rSTs:2)
          • Nocardia terpenica (isolates:11; rSTs:4 tree)
          • Nocardia terrae (isolates:1; rSTs:1)
          • Nocardia testacea (isolates:2; rSTs:2)
          • Nocardia thailandica (isolates:1; rSTs:1)
          • Nocardia transvalensis (isolates:2; rSTs:1)
          • Nocardia uniformis (isolates:2; rSTs:1)
          • Nocardia vaccinii (isolates:1; rSTs:1)
          • Nocardia vermiculata (isolates:2; rSTs:1)
          • Nocardia veterana (isolates:4; rSTs:1)
          • Nocardia vinacea (isolates:5; rSTs:5 tree)
          • Nocardia violaceofusca (isolates:1; rSTs:1)
          • Nocardia vulneris (isolates:3; rSTs:2)
          • Nocardia wallacei (isolates:14; rSTs:6 tree)
          • Nocardia xishanensis (isolates:3; rSTs:3 tree)
          • Nocardia yamanashiensis (isolates:2; rSTs:2)
          • Nocardia yunnanensis (isolates:1; rSTs:1)
        • Prescottella (isolates:219; rSTs:103 tree)
          • Prescottella agglutinans (isolates:2; rSTs:2)
          • Prescottella defluvii (isolates:1; rSTs:1)
          • Prescottella equi (isolates:212; rSTs:93 tree)
          • Prescottella soli (isolates:1; rSTs:1)
          • Prescottella sp. (isolates:2; rSTs:5 tree)
          • Prescottella subtropica (isolates:1; rSTs:1)
        • Rhodococcus (isolates:834; rSTs:471 tree)
          • Rhodococcus aetherivorans (isolates:14; rSTs:12 tree)
          • Rhodococcus artemisiae (isolates:1; rSTs:1)
          • Rhodococcus baikonurensis (isolates:1)
          • Rhodococcus cerastii (isolates:1; rSTs:1)
          • Rhodococcus cercidiphylli (isolates:1; rSTs:1)
          • Rhodococcus coprophilus (isolates:5; rSTs:3 tree)
          • Rhodococcus corynebacterioides (isolates:7; rSTs:6 tree)
          • Rhodococcus erythropolis (isolates:37; rSTs:26 tree)
          • Rhodococcus fascians (isolates:183; rSTs:37 tree)
          • Rhodococcus globerulus (isolates:7; rSTs:5 tree)
          • Rhodococcus gordoniae (isolates:3; rSTs:2)
          • Rhodococcus indonesiensis (isolates:1)
          • Rhodococcus jostii (isolates:2; rSTs:1)
          • Rhodococcus koreensis (isolates:4; rSTs:2)
          • Rhodococcus kroppenstedtii (isolates:10; rSTs:7 tree)
          • Rhodococcus kyotonensis (isolates:2; rSTs:2)
          • Rhodococcus maanshanensis (isolates:2; rSTs:1)
          • Rhodococcus marinonascens (isolates:1; rSTs:1)
          • Rhodococcus olei (isolates:1; rSTs:1)
          • Rhodococcus opacus (isolates:30; rSTs:22 tree)
          • Rhodococcus oryzae (isolates:1; rSTs:1)
          • Rhodococcus oxybenzonivorans (isolates:7; rSTs:4 tree)
          • Rhodococcus phenolicus (isolates:2; rSTs:1)
          • Rhodococcus pseudokoreensis (isolates:1; rSTs:1)
          • Rhodococcus pyridinivorans (isolates:32; rSTs:25 tree)
          • Rhodococcus qingshengii (isolates:53; rSTs:42 tree)
          • Rhodococcus rhodnii (isolates:3; rSTs:1)
          • Rhodococcus rhodochrous (isolates:20; rSTs:12 tree)
          • Rhodococcus ruber (isolates:29; rSTs:19 tree)
          • Rhodococcus sovatensis (isolates:1; rSTs:1)
          • Rhodococcus sp. (isolates:353; rSTs:221 tree)
          • Rhodococcus spelaei (isolates:1; rSTs:1)
          • Rhodococcus spongiicola (isolates:1; rSTs:1)
          • Rhodococcus triatomae (isolates:4; rSTs:1)
          • Rhodococcus trifolii (isolates:1; rSTs:1)
          • Rhodococcus tukisamuensis (isolates:2; rSTs:1)
          • Rhodococcus wratislaviensis (isolates:3; rSTs:2)
          • Rhodococcus xishaensis (isolates:1; rSTs:1)
          • Rhodococcus yananensis (isolates:1; rSTs:1)
          • Rhodococcus yunnanensis (isolates:1; rSTs:1)
          • Rhodococcus zopfii (isolates:4; rSTs:2)
        • Smaragdicoccus (isolates:2; rSTs:1)
          • Smaragdicoccus niigatensis (isolates:2; rSTs:1)
        • Spelaeibacter (isolates:1; rSTs:1)
          • Spelaeibacter cavernicola (isolates:1; rSTs:1)
        • Williamsia (isolates:22; rSTs:19 tree)
          • Williamsia deligens (isolates:2; rSTs:1)
          • Williamsia faeni (isolates:1; rSTs:1)
          • Williamsia herbipolensis (isolates:2; rSTs:2)
          • Williamsia limnetica (isolates:1; rSTs:1)
          • Williamsia marianensis (isolates:1; rSTs:1)
          • Williamsia maris (isolates:2; rSTs:1)
          • Williamsia muralis (isolates:2; rSTs:1)
          • Williamsia phyllosphaerae (isolates:1; rSTs:1)
          • Williamsia serinedens (isolates:2; rSTs:1)
          • Williamsia soli (isolates:1; rSTs:1)
          • Williamsia sp. (isolates:6; rSTs:7 tree)
          • Williamsia sterculiae (isolates:1; rSTs:1)
      • Segniliparaceae (isolates:4; rSTs:2)
        • Segniliparus (isolates:4; rSTs:2)
          • Segniliparus rotundus (isolates:3; rSTs:1)
          • Segniliparus rugosus (isolates:1; rSTs:1)
      • Speluncibacteraceae (isolates:2; rSTs:2)
        • Speluncibacter (isolates:2; rSTs:2)
          • Speluncibacter jeojiensis (isolates:2; rSTs:2)
      • Tsukamurellaceae (isolates:40; rSTs:29 tree)
        • Tsukamurella (isolates:40; rSTs:29 tree)
          • Tsukamurella asaccharolytica (isolates:1; rSTs:1)
          • Tsukamurella conjunctivitidis (isolates:1; rSTs:1)
          • Tsukamurella ocularis (isolates:3; rSTs:2)
          • Tsukamurella paurometabola (isolates:2; rSTs:2)
          • Tsukamurella pseudospumae (isolates:2; rSTs:2)
          • Tsukamurella pulmonis (isolates:6; rSTs:3 tree)
          • Tsukamurella soli (isolates:1; rSTs:1)
          • Tsukamurella sp. (isolates:8; rSTs:7 tree)
          • Tsukamurella spumae (isolates:2; rSTs:1)
          • Tsukamurella strandjordii (isolates:2; rSTs:2)
          • Tsukamurella tyrosinosolvens (isolates:12; rSTs:7 tree)
    • Nakamurellales (isolates:16; rSTs:15 tree)
      • Nakamurellaceae (isolates:16; rSTs:15 tree)
        • Nakamurella (isolates:16; rSTs:15 tree)
          • Nakamurella aerolata (isolates:1; rSTs:1)
          • Nakamurella alba (isolates:1; rSTs:1)
          • Nakamurella antarctica (isolates:1; rSTs:1)
          • Nakamurella deserti (isolates:1; rSTs:1)
          • Nakamurella endophytica (isolates:1; rSTs:1)
          • Nakamurella flava (isolates:1; rSTs:1)
          • Nakamurella flavida (isolates:3; rSTs:1)
          • Nakamurella lactea (isolates:1; rSTs:1)
          • Nakamurella leprariae (isolates:1; rSTs:1)
          • Nakamurella multipartita (isolates:1; rSTs:1)
          • Nakamurella panacisegetis (isolates:1; rSTs:1)
          • Nakamurella sp. (isolates:3; rSTs:4 tree)
    • Propionibacteriales (isolates:1316; rSTs:908 tree)
      • Actinopolymorphaceae (isolates:12; rSTs:9 tree)
        • Actinopolymorpha (isolates:12; rSTs:9 tree)
          • Actinopolymorpha alba (isolates:1; rSTs:1)
          • Actinopolymorpha cephalotaxi (isolates:2; rSTs:1)
          • Actinopolymorpha pittospori (isolates:2; rSTs:1)
          • Actinopolymorpha rutila (isolates:2; rSTs:1)
          • Actinopolymorpha singaporensis (isolates:1; rSTs:1)
          • Actinopolymorpha sp. (isolates:4; rSTs:4 tree)
      • Kribbellaceae (isolates:77; rSTs:70 tree)
        • Kribbella (isolates:77; rSTs:70 tree)
          • Kribbella alba (isolates:1; rSTs:1)
          • Kribbella albertanoniae (isolates:1; rSTs:1)
          • Kribbella aluminosa (isolates:2; rSTs:1)
          • Kribbella amoyensis (isolates:1; rSTs:1)
          • Kribbella antibiotica (isolates:1; rSTs:1)
          • Kribbella antiqua (isolates:1; rSTs:1)
          • Kribbella capetownensis (isolates:1; rSTs:1)
          • Kribbella catacumbae (isolates:1; rSTs:1)
          • Kribbella flavida (isolates:1; rSTs:1)
          • Kribbella ginsengisoli (isolates:1; rSTs:1)
          • Kribbella hippodromi (isolates:1; rSTs:1)
          • Kribbella italica (isolates:1; rSTs:1)
          • Kribbella jejuensis (isolates:2; rSTs:1)
          • Kribbella jiaozuonensis (isolates:1; rSTs:1)
          • Kribbella kalugense (isolates:1; rSTs:1)
          • Kribbella karoonensis (isolates:1; rSTs:1)
          • Kribbella koreensis (isolates:1; rSTs:1)
          • Kribbella lupini (isolates:1; rSTs:1)
          • Kribbella monticola (isolates:1; rSTs:1)
          • Kribbella orskensis (isolates:1; rSTs:1)
          • Kribbella pittospori (isolates:1; rSTs:1)
          • Kribbella pratensis (isolates:1; rSTs:1)
          • Kribbella qitaiheensis (isolates:1; rSTs:1)
          • Kribbella rubisoli (isolates:1; rSTs:1)
          • Kribbella sancticallisti (isolates:1; rSTs:1)
          • Kribbella sandramycini (isolates:3; rSTs:1)
          • Kribbella shirazensis (isolates:1; rSTs:1)
          • Kribbella sindirgiensis (isolates:1; rSTs:1)
          • Kribbella solani (isolates:3; rSTs:2)
          • Kribbella soli (isolates:1; rSTs:1)
          • Kribbella sp. (isolates:35; rSTs:33 tree)
          • Kribbella speibonae (isolates:2; rSTs:2)
          • Kribbella steppae (isolates:1; rSTs:1)
          • Kribbella turkmenica (isolates:1; rSTs:1)
          • Kribbella voronezhensis (isolates:1; rSTs:1)
          • Kribbella yunnanensis (isolates:1; rSTs:1)
      • Nocardioidaceae (isolates:394; rSTs:323 tree)
        • Aeromicrobium (isolates:63; rSTs:47 tree)
          • Aeromicrobium alkaliterrae (isolates:1)
          • Aeromicrobium camelliae (isolates:1; rSTs:1)
          • Aeromicrobium chenweiae (isolates:2; rSTs:1)
          • Aeromicrobium choanae (isolates:1; rSTs:1)
          • Aeromicrobium duanguangcaii (isolates:2; rSTs:2)
          • Aeromicrobium endophyticum (isolates:1; rSTs:1)
          • Aeromicrobium erythreum (isolates:1; rSTs:1)
          • Aeromicrobium fastidiosum (isolates:2; rSTs:1)
          • Aeromicrobium flavum (isolates:2; rSTs:1)
          • Aeromicrobium ginsengisoli (isolates:1; rSTs:1)
          • Aeromicrobium halocynthiae (isolates:1; rSTs:1)
          • Aeromicrobium marinum (isolates:1; rSTs:1)
          • Aeromicrobium massiliense (isolates:2; rSTs:1)
          • Aeromicrobium panaciterrae (isolates:2; rSTs:2)
          • Aeromicrobium phoceense (isolates:1; rSTs:1)
          • Aeromicrobium phragmitis (isolates:1; rSTs:1)
          • Aeromicrobium piscarium (isolates:1; rSTs:1)
          • Aeromicrobium senzhongii (isolates:3; rSTs:2)
          • Aeromicrobium sp. (isolates:27; rSTs:20 tree)
          • Aeromicrobium stalagmiti (isolates:1; rSTs:1)
          • Aeromicrobium tamlense (isolates:3; rSTs:1)
          • Aeromicrobium terrae (isolates:1; rSTs:1)
          • Aeromicrobium wangtongii (isolates:3; rSTs:2)
          • Aeromicrobium yanjiei (isolates:2; rSTs:2)
        • Friedmanniella (isolates:1; rSTs:1)
          • Friedmanniella luteola (isolates:1; rSTs:1)
        • Marmoricola (isolates:1; rSTs:1 tree)
          • Marmoricola endophyticus (isolates:1; rSTs:1)
        • Micropruina (isolates:3; rSTs:2)
          • Micropruina glycogenica (isolates:2; rSTs:1)
          • Micropruina sp. (isolates:1; rSTs:1)
        • Mumia (isolates:10; rSTs:9 tree)
          • Mumia flava (isolates:1; rSTs:1)
          • Mumia quercus (isolates:1; rSTs:1)
          • Mumia sp. (isolates:6; rSTs:5 tree)
          • Mumia xiangluensis (isolates:1; rSTs:1)
          • Mumia zhuanghuii (isolates:1; rSTs:1)
        • Nocardioides (isolates:303; rSTs:255 tree)
          • Nocardioides acrostichi (isolates:1; rSTs:1)
          • Nocardioides aequoreus (isolates:1; rSTs:1)
          • Nocardioides aestuarii (isolates:1)
          • Nocardioides agariphilus (isolates:1; rSTs:1)
          • Nocardioides agri (isolates:1; rSTs:1)
          • Nocardioides albertanoniae (isolates:1; rSTs:1)
          • Nocardioides albidus (isolates:1; rSTs:1)
          • Nocardioides albus (isolates:2; rSTs:1)
          • Nocardioides alcanivorans (isolates:1; rSTs:1)
          • Nocardioides alkalitolerans (isolates:1; rSTs:1)
          • Nocardioides alpinus (isolates:3; rSTs:1)
          • Nocardioides anomalus (isolates:1; rSTs:1)
          • Nocardioides antri (isolates:1; rSTs:1)
          • Nocardioides aquaticus (isolates:2; rSTs:1)
          • Nocardioides aquiterrae (isolates:1; rSTs:1)
          • Nocardioides aromaticivorans (isolates:3; rSTs:2)
          • Nocardioides astragali (isolates:1; rSTs:1)
          • Nocardioides aurantiacus (isolates:1; rSTs:1)
          • Nocardioides baculatus (isolates:1; rSTs:1)
          • Nocardioides baekrokdamisoli (isolates:1; rSTs:1)
          • Nocardioides bigeumensis (isolates:1; rSTs:1)
          • Nocardioides bizhenqiangii (isolates:2; rSTs:2)
          • Nocardioides bruguierae (isolates:2; rSTs:2)
          • Nocardioides caeni (isolates:2; rSTs:2)
          • Nocardioides caldifontis (isolates:1; rSTs:1)
          • Nocardioides campestrisoli (isolates:2; rSTs:2)
          • Nocardioides carbamazepini (isolates:1; rSTs:1)
          • Nocardioides caricicola (isolates:1; rSTs:1)
          • Nocardioides cavernae (isolates:1; rSTs:1)
          • Nocardioides cavernaquae (isolates:1; rSTs:1)
          • Nocardioides conyzicola (isolates:1; rSTs:1)
          • Nocardioides coralli (isolates:1; rSTs:1)
          • Nocardioides cremeus (isolates:1; rSTs:1)
          • Nocardioides currus (isolates:1; rSTs:1)
          • Nocardioides cynanchi (isolates:1; rSTs:1)
          • Nocardioides daedukensis (isolates:1; rSTs:1)
          • Nocardioides daeguensis (isolates:3; rSTs:1)
          • Nocardioides daejeonensis (isolates:1; rSTs:1)
          • Nocardioides daphniae (isolates:2; rSTs:2)
          • Nocardioides deserti (isolates:2; rSTs:1)
          • Nocardioides dokdonensis (isolates:1; rSTs:1)
          • Nocardioides donggukensis (isolates:1; rSTs:1)
          • Nocardioides dongkuii (isolates:2; rSTs:2)
          • Nocardioides dongxiaopingii (isolates:1; rSTs:1)
          • Nocardioides dubius (isolates:1)
          • Nocardioides eburneiflavus (isolates:1; rSTs:1)
          • Nocardioides endophyticus (isolates:1; rSTs:1)
          • Nocardioides euryhalodurans (isolates:1; rSTs:1)
          • Nocardioides exalbidus (isolates:1; rSTs:1)
          • Nocardioides faecalis (isolates:3; rSTs:2)
          • Nocardioides ferulae (isolates:1; rSTs:1)
          • Nocardioides flavescens (isolates:1; rSTs:1)
          • Nocardioides flavus (ex Wang et al. 2016) (isolates:1; rSTs:1)
          • Nocardioides fonticola (isolates:1; rSTs:1)
          • Nocardioides furvisabuli (isolates:2; rSTs:1)
          • Nocardioides ganghwensis (isolates:1; rSTs:1)
          • Nocardioides gansuensis (isolates:1; rSTs:1)
          • Nocardioides gilvus (isolates:1; rSTs:1)
          • Nocardioides ginsengisegetis (isolates:1; rSTs:1)
          • Nocardioides glacieisoli (isolates:1; rSTs:1)
          • Nocardioides guangzhouensis (isolates:1; rSTs:1)
          • Nocardioides halotolerans (isolates:1; rSTs:1)
          • Nocardioides houyundeii (isolates:2; rSTs:2)
          • Nocardioides humi (isolates:2; rSTs:2)
          • Nocardioides humilatus (isolates:1; rSTs:1)
          • Nocardioides hwasunensis (isolates:2; rSTs:1)
          • Nocardioides imazamoxiresistens (isolates:1)
          • Nocardioides immobilis (isolates:1; rSTs:1)
          • Nocardioides insulae (isolates:1; rSTs:1)
          • Nocardioides iriomotensis (isolates:1; rSTs:1)
          • Nocardioides islandensis (isolates:1; rSTs:1)
          • Nocardioides jejuensis (isolates:1; rSTs:1)
          • Nocardioides jensenii (isolates:2; rSTs:1)
          • Nocardioides jiangsuensis (isolates:1; rSTs:1)
          • Nocardioides jiangxiensis (isolates:1; rSTs:1)
          • Nocardioides jishulii (isolates:2; rSTs:1)
          • Nocardioides kongjuensis (isolates:2; rSTs:1)
          • Nocardioides koreensis (isolates:1; rSTs:1)
          • Nocardioides kribbensis (isolates:3; rSTs:2)
          • Nocardioides lacusdianchii (isolates:1; rSTs:1)
          • Nocardioides lentus (isolates:1; rSTs:1)
          • Nocardioides lianchengensis (isolates:2; rSTs:1)
          • Nocardioides lijunqiniae (isolates:2; rSTs:2)
          • Nocardioides limicola (isolates:1; rSTs:1)
          • Nocardioides litoris (isolates:1; rSTs:1)
          • Nocardioides luteus (isolates:3; rSTs:1)
          • Nocardioides luti (isolates:1; rSTs:1)
          • Nocardioides malaquae (isolates:1; rSTs:1)
          • Nocardioides mangrovi (isolates:1; rSTs:1)
          • Nocardioides mangrovicus (isolates:1; rSTs:1)
          • Nocardioides marinisabuli (isolates:2; rSTs:1)
          • Nocardioides marinquilinus (isolates:1; rSTs:1)
          • Nocardioides marinus (isolates:2; rSTs:1)
          • Nocardioides marmoribigeumensis (isolates:2; rSTs:1)
          • Nocardioides marmoriginsengisoli (isolates:1; rSTs:1)
          • Nocardioides marmorisolisilvae (isolates:1; rSTs:1)
          • Nocardioides marmotae (isolates:4; rSTs:3 tree)
          • Nocardioides massiliensis (isolates:2; rSTs:1)
          • Nocardioides mesophilus (isolates:1; rSTs:1)
          • Nocardioides nanhaiensis (isolates:1; rSTs:1)
          • Nocardioides nematodiphilus (isolates:1; rSTs:1)
          • Nocardioides nitrophenolicus (isolates:2; rSTs:1)
          • Nocardioides oceani (isolates:1; rSTs:1)
          • Nocardioides ochotonae (isolates:2; rSTs:2)
          • Nocardioides okcheonensis (isolates:1; rSTs:1)
          • Nocardioides oleivorans (isolates:1; rSTs:1)
          • Nocardioides palaemonis (isolates:1; rSTs:1)
          • Nocardioides panacihumi (isolates:1)
          • Nocardioides panacis (isolates:1; rSTs:1)
          • Nocardioides panacisoli (isolates:1; rSTs:1)
          • Nocardioides panaciterrulae (isolates:1; rSTs:1)
          • Nocardioides pantholopis (isolates:2; rSTs:2)
          • Nocardioides panzhihuensis (isolates:1; rSTs:1)
          • Nocardioides pelophilus (isolates:1; rSTs:1)
          • Nocardioides perillae (isolates:1; rSTs:1)
          • Nocardioides phosphati (isolates:1; rSTs:1)
          • Nocardioides pini (isolates:1; rSTs:1)
          • Nocardioides pinisoli (isolates:1; rSTs:1)
          • Nocardioides piscis (isolates:1; rSTs:1)
          • Nocardioides plantarum (isolates:1; rSTs:1)
          • Nocardioides pocheonensis (isolates:1; rSTs:1)
          • Nocardioides potassii (isolates:1; rSTs:1)
          • Nocardioides psychrotolerans (isolates:2; rSTs:1)
          • Nocardioides pyridinolyticus (isolates:1)
          • Nocardioides renjunii (isolates:2; rSTs:2)
          • Nocardioides rotundus (isolates:1; rSTs:1)
          • Nocardioides rubriscoriae (isolates:1; rSTs:1)
          • Nocardioides salarius (isolates:3; rSTs:1)
          • Nocardioides sambongensis (isolates:1; rSTs:1)
          • Nocardioides scoriae (isolates:1; rSTs:1)
          • Nocardioides seonyuensis (isolates:1; rSTs:1)
          • Nocardioides silvaticus (isolates:1; rSTs:1)
          • Nocardioides soli (isolates:1; rSTs:1)
          • Nocardioides solisilvae (isolates:1; rSTs:1)
          • Nocardioides sp. (isolates:113; rSTs:99 tree)
          • Nocardioides speluncae (isolates:1; rSTs:1)
          • Nocardioides stalactiti (isolates:1; rSTs:1)
          • Nocardioides szechwanensis (isolates:2; rSTs:1)
          • Nocardioides terrae (isolates:1; rSTs:1)
          • Nocardioides thalensis (isolates:1; rSTs:1)
          • Nocardioides turkmenicus (isolates:1; rSTs:1)
          • Nocardioides ungokensis (isolates:1; rSTs:1)
          • Nocardioides yefusunii (isolates:2; rSTs:1)
          • Nocardioides zeae (isolates:1; rSTs:1)
          • Nocardioides zhouii (isolates:1; rSTs:1)
        • Pimelobacter (isolates:8; rSTs:4 tree)
          • Pimelobacter simplex (isolates:7; rSTs:3 tree)
          • Pimelobacter sp. (isolates:1; rSTs:1)
        • Propionicicella (isolates:1; rSTs:1)
          • Propionicicella superfundia (isolates:1; rSTs:1)
        • Propionicimonas (isolates:1; rSTs:1)
          • Propionicimonas paludicola (isolates:1; rSTs:1)
        • Solicola (isolates:1)
          • Solicola gregarius (isolates:1)
        • Tenggerimyces (isolates:1; rSTs:1)
          • Tenggerimyces flavus (isolates:1; rSTs:1)
        • Thermasporomyces (isolates:1; rSTs:1)
          • Thermasporomyces composti (isolates:1; rSTs:1)
      • Propionibacteriaceae (isolates:833; rSTs:506 tree)
        • Acidipropionibacterium (isolates:16; rSTs:11 tree)
          • Acidipropionibacterium acidipropionici (isolates:8; rSTs:4 tree)
          • Acidipropionibacterium jensenii (isolates:5; rSTs:4 tree)
          • Acidipropionibacterium thoenii (isolates:1; rSTs:1)
          • Acidipropionibacterium timonense (isolates:1; rSTs:1)
          • Acidipropionibacterium virtanenii (isolates:1; rSTs:1)
        • Aestuariimicrobium (isolates:4; rSTs:4 tree)
          • Aestuariimicrobium ganziense (isolates:1; rSTs:1)
          • Aestuariimicrobium kwangyangense (isolates:1; rSTs:1)
          • Aestuariimicrobium sp. (isolates:2; rSTs:2)
        • Arachnia (isolates:14; rSTs:8 tree)
          • Arachnia propionica (isolates:10; rSTs:6 tree)
          • Arachnia rubra (isolates:3; rSTs:1)
          • [Pseudopropionibacterium] massiliense (isolates:1; rSTs:1)
        • Auraticoccus (isolates:2; rSTs:2)
          • Auraticoccus cholistanensis (isolates:1; rSTs:1)
          • Auraticoccus monumenti (isolates:1; rSTs:1)
        • Brooklawnia (isolates:3; rSTs:2)
          • Brooklawnia cerclae (isolates:2; rSTs:1)
          • Brooklawnia propionicigenes (isolates:1; rSTs:1)
        • Cutibacterium (isolates:582; rSTs:334 tree)
          • Cutibacterium acnes (isolates:464; rSTs:251 tree)
          • Cutibacterium avidum (isolates:89; rSTs:61 tree)
          • Cutibacterium equinum (isolates:1; rSTs:1)
          • Cutibacterium granulosum (isolates:5; rSTs:2)
          • Cutibacterium modestum (isolates:12; rSTs:9 tree)
          • Cutibacterium namnetense (isolates:8; rSTs:7 tree)
          • Cutibacterium porci (isolates:1; rSTs:1)
          • Cutibacterium sp. (isolates:2; rSTs:2 tree)
        • Desertihabitans (isolates:2; rSTs:2)
          • Desertihabitans aurantiacus (isolates:1; rSTs:1)
          • Desertihabitans brevis (isolates:1; rSTs:1)
        • Enemella (isolates:8; rSTs:8 tree)
          • Enemella dayhoffiae (isolates:1; rSTs:1)
          • Enemella evansiae (isolates:7; rSTs:7 tree)
        • Granulicoccus (isolates:2; rSTs:1)
          • Granulicoccus phenolivorans (isolates:2; rSTs:1)
        • Luteococcus (isolates:8; rSTs:5 tree)
          • Luteococcus japonicus (isolates:2; rSTs:2)
          • Luteococcus peritonei (isolates:1; rSTs:1)
          • Luteococcus sanguinis (isolates:1)
          • Luteococcus sp. (isolates:4; rSTs:2)
        • Microlunatus (isolates:20; rSTs:15 tree)
          • Microlunatus antarcticus (isolates:1)
          • Microlunatus aurantiacus (isolates:1; rSTs:1)
          • Microlunatus capsulatus (isolates:2; rSTs:1)
          • Microlunatus elymi (isolates:1; rSTs:1)
          • Microlunatus endophyticus (isolates:1; rSTs:1)
          • Microlunatus flavus (isolates:1; rSTs:1)
          • Microlunatus ginsengisoli (isolates:1)
          • Microlunatus kandeliicorticis (isolates:1; rSTs:1)
          • Microlunatus panaciterrae (isolates:2; rSTs:1)
          • Microlunatus parietis (isolates:1; rSTs:1)
          • Microlunatus phosphovorus (isolates:1; rSTs:1)
          • Microlunatus sagamiharensis (isolates:1; rSTs:1)
          • Microlunatus soli (isolates:1; rSTs:1)
          • Microlunatus sp. (isolates:1; rSTs:1)
          • Microlunatus speluncae (isolates:1; rSTs:1)
          • Microlunatus spumicola (isolates:2; rSTs:1)
          • Microlunatus terrae (isolates:1; rSTs:1)
        • Naumannella (isolates:2; rSTs:2)
          • Naumannella cuiyingiana (isolates:1; rSTs:1)
          • Naumannella halotolerans (isolates:1; rSTs:1)
        • Nigerium (isolates:2; rSTs:1)
          • Nigerium massiliense (isolates:2; rSTs:1)
        • Parenemella (isolates:2; rSTs:2)
          • Parenemella sanctibonifatiensis (isolates:2; rSTs:2)
        • Propionibacterium (isolates:113; rSTs:66 tree)
          • Propionibacterium acidifaciens (isolates:2; rSTs:2)
          • Propionibacterium australiense (isolates:4; rSTs:2)
          • Propionibacterium cyclohexanicum (isolates:1; rSTs:1)
          • Propionibacterium freudenreichii (isolates:105; rSTs:60 tree)
          • Propionibacterium ruminifibrarum (isolates:1; rSTs:1)
        • Propioniciclava (isolates:11; rSTs:9 tree)
          • Propioniciclava coleopterorum (isolates:1; rSTs:1)
          • Propioniciclava flava (isolates:1; rSTs:1)
          • Propioniciclava sinopodophylli (isolates:2; rSTs:2)
          • Propioniciclava soli (isolates:2; rSTs:2)
          • Propioniciclava sp. (isolates:3; rSTs:2)
          • Propioniciclava tarda (isolates:2; rSTs:1)
        • Propioniferax (isolates:2; rSTs:1)
          • Propioniferax innocua (isolates:2; rSTs:1)
        • Propionimicrobium (isolates:5; rSTs:4 tree)
          • Propionimicrobium lymphophilum (isolates:4; rSTs:3 tree)
          • Propionimicrobium sp. (isolates:1; rSTs:1)
        • Raineyella (isolates:4; rSTs:4 tree)
          • Raineyella antarctica (isolates:1; rSTs:1)
          • Raineyella fluvialis (isolates:1; rSTs:1)
          • Raineyella sp. (isolates:2; rSTs:2)
        • Tessaracoccus (isolates:30; rSTs:24 tree)
          • Tessaracoccus antarcticus (isolates:1; rSTs:1)
          • Tessaracoccus aquimaris (isolates:1; rSTs:1)
          • Tessaracoccus bendigoensis (isolates:1; rSTs:1)
          • Tessaracoccus caeni (isolates:1; rSTs:1)
          • Tessaracoccus coleopterorum (isolates:1)
          • Tessaracoccus defluvii (isolates:2; rSTs:2)
          • Tessaracoccus flavescens (isolates:1; rSTs:1)
          • Tessaracoccus flavus (isolates:2; rSTs:1)
          • Tessaracoccus lapidicaptus (isolates:2; rSTs:2)
          • Tessaracoccus lubricantis (isolates:1; rSTs:1)
          • Tessaracoccus massiliensis (isolates:2; rSTs:1)
          • Tessaracoccus oleiagri (isolates:1; rSTs:1)
          • Tessaracoccus palaemonis (isolates:1; rSTs:1)
          • Tessaracoccus rhinocerotis (isolates:1; rSTs:1)
          • Tessaracoccus sp. (isolates:11; rSTs:8 tree)
          • Tessaracoccus timonensis (isolates:1; rSTs:1)
        • Vaginimicrobium (isolates:1; rSTs:1)
          • Vaginimicrobium propionicum (isolates:1; rSTs:1)
    • Pseudonocardiales (isolates:646; rSTs:532 tree)
      • Pseudonocardiaceae (isolates:646; rSTs:532 tree)
        • Actinoalloteichus (isolates:11; rSTs:8 tree)
          • Actinoalloteichus caeruleus (isolates:3; rSTs:2)
          • Actinoalloteichus fjordicus (isolates:1; rSTs:1)
          • Actinoalloteichus hoggarensis (isolates:2; rSTs:1)
          • Actinoalloteichus hymeniacidonis (isolates:2; rSTs:1)
          • Actinoalloteichus sp. (isolates:2; rSTs:2)
          • Actinoalloteichus spitiensis (isolates:1; rSTs:1)
        • Actinocrispum (isolates:2; rSTs:2)
          • Actinocrispum sp. (isolates:1; rSTs:1)
          • Actinocrispum wychmicini (isolates:1; rSTs:1)
        • Actinokineospora (isolates:26; rSTs:20 tree)
          • Actinokineospora alba (isolates:3; rSTs:1)
          • Actinokineospora auranticolor (isolates:1; rSTs:1)
          • Actinokineospora baliensis (isolates:1; rSTs:1)
          • Actinokineospora bangkokensis (isolates:1; rSTs:1)
          • Actinokineospora cianjurensis (isolates:1; rSTs:1)
          • Actinokineospora diospyrosa (isolates:2; rSTs:1)
          • Actinokineospora enzanensis (isolates:1; rSTs:1)
          • Actinokineospora fastidiosa (isolates:1; rSTs:1)
          • Actinokineospora globicatena (isolates:5; rSTs:2)
          • Actinokineospora inagensis (isolates:1; rSTs:1)
          • Actinokineospora iranica (isolates:1; rSTs:1)
          • Actinokineospora pegani (isolates:1; rSTs:1)
          • Actinokineospora sp. (isolates:3; rSTs:3 tree)
          • Actinokineospora spheciospongiae (isolates:2; rSTs:2)
          • Actinokineospora terrae (isolates:1; rSTs:1)
          • Actinokineospora xionganensis (isolates:1; rSTs:1)
        • Actinomycetospora (isolates:24; rSTs:20 tree)
          • Actinomycetospora callitridis (isolates:1; rSTs:1)
          • Actinomycetospora chiangmaiensis (isolates:1; rSTs:1)
          • Actinomycetospora chibensis (isolates:2; rSTs:1)
          • Actinomycetospora chlora (isolates:1; rSTs:1)
          • Actinomycetospora cinnamomea (isolates:1; rSTs:1)
          • Actinomycetospora corticicola (isolates:2; rSTs:1)
          • Actinomycetospora endophytica (isolates:1; rSTs:1)
          • Actinomycetospora lemnae (isolates:1; rSTs:1)
          • Actinomycetospora lutea (isolates:1; rSTs:1)
          • Actinomycetospora soli (isolates:1; rSTs:1)
          • Actinomycetospora sp. (isolates:7; rSTs:7 tree)
          • Actinomycetospora straminea (isolates:2; rSTs:1)
          • Actinomycetospora succinea (isolates:2; rSTs:1)
          • Actinomycetospora termitidis (isolates:1; rSTs:1)
        • Actinophytocola (isolates:6; rSTs:5 tree)
          • Actinophytocola algeriensis (isolates:2; rSTs:1)
          • Actinophytocola gossypii (isolates:1; rSTs:1)
          • Actinophytocola oryzae (isolates:1; rSTs:1)
          • Actinophytocola xanthii (isolates:1; rSTs:1)
          • Actinophytocola xinjiangensis (isolates:1; rSTs:1)
        • Actinosynnema (isolates:6; rSTs:4 tree)
          • Actinosynnema mirum (isolates:1; rSTs:1)
          • Actinosynnema pretiosum (isolates:5; rSTs:3 tree)
        • Alloactinosynnema (isolates:1; rSTs:1)
          • Alloactinosynnema sp. (isolates:1; rSTs:1)
        • Allokutzneria (isolates:5; rSTs:4 tree)
          • Allokutzneria albata (isolates:2; rSTs:1)
          • Allokutzneria multivorans (isolates:1; rSTs:1)
          • Allokutzneria sp. (isolates:2; rSTs:2)
        • Allosaccharopolyspora (isolates:1; rSTs:1)
          • Allosaccharopolyspora coralli (isolates:1; rSTs:1)
        • Amycolatopsis (isolates:214; rSTs:177 tree)
          • Amycolatopsis acidicola (isolates:1; rSTs:1)
          • Amycolatopsis acididurans (isolates:1; rSTs:1)
          • Amycolatopsis acidiphila (isolates:3; rSTs:1)
          • Amycolatopsis aidingensis (isolates:1; rSTs:1)
          • Amycolatopsis alba (isolates:2; rSTs:1)
          • Amycolatopsis albidoflavus (isolates:1; rSTs:1)
          • Amycolatopsis albispora (isolates:1; rSTs:1)
          • Amycolatopsis alkalitolerans (isolates:1; rSTs:1)
          • Amycolatopsis anabasis (isolates:1; rSTs:1)
          • Amycolatopsis antarctica (isolates:1; rSTs:1)
          • Amycolatopsis arida (isolates:2; rSTs:1)
          • Amycolatopsis australiensis (isolates:1; rSTs:1)
          • Amycolatopsis azurea (isolates:2; rSTs:1)
          • Amycolatopsis balhimycina (isolates:2; rSTs:1)
          • Amycolatopsis bartoniae (isolates:3; rSTs:1)
          • Amycolatopsis benzoatilytica (isolates:1; rSTs:1)
          • Amycolatopsis bullii (isolates:1; rSTs:1)
          • Amycolatopsis camponoti (isolates:1; rSTs:1)
          • Amycolatopsis cihanbeyliensis (isolates:1; rSTs:1)
          • Amycolatopsis circi (isolates:1; rSTs:1)
          • Amycolatopsis coloradensis (isolates:2; rSTs:1)
          • Amycolatopsis cynarae (isolates:1; rSTs:1)
          • Amycolatopsis decaplanina (isolates:1; rSTs:1)
          • Amycolatopsis dendrobii (isolates:1; rSTs:1)
          • Amycolatopsis deserti (isolates:1; rSTs:1)
          • Amycolatopsis eburnea (isolates:1; rSTs:1)
          • Amycolatopsis echigonensis (isolates:2; rSTs:2)
          • Amycolatopsis endophytica (isolates:1; rSTs:1)
          • Amycolatopsis granulosa (isolates:1; rSTs:1)
          • Amycolatopsis iheyensis (isolates:1; rSTs:1)
          • Amycolatopsis japonica (isolates:5; rSTs:5 tree)
          • Amycolatopsis jejuensis (isolates:1; rSTs:1)
          • Amycolatopsis jiangsuensis (isolates:1; rSTs:1)
          • Amycolatopsis kentuckyensis (isolates:1; rSTs:1)
          • Amycolatopsis keratiniphila (isolates:5; rSTs:4 tree)
          • Amycolatopsis lexingtonensis (isolates:2; rSTs:1)
          • Amycolatopsis lurida (isolates:2; rSTs:1)
          • Amycolatopsis magusensis (isolates:2; rSTs:1)
          • Amycolatopsis marina (isolates:1; rSTs:1)
          • Amycolatopsis mediterranei (isolates:10; rSTs:3 tree)
          • Amycolatopsis methanolica (isolates:3; rSTs:2)
          • Amycolatopsis minnesotensis (isolates:1; rSTs:1)
          • Amycolatopsis mongoliensis (isolates:1; rSTs:1)
          • Amycolatopsis nigrescens (isolates:1; rSTs:1)
          • Amycolatopsis nivea (isolates:1; rSTs:1)
          • Amycolatopsis oliviviridis (isolates:1; rSTs:1)
          • Amycolatopsis orientalis (isolates:2; rSTs:2)
          • Amycolatopsis palatopharyngis (isolates:1; rSTs:1)
          • Amycolatopsis panacis (isolates:1; rSTs:1)
          • Amycolatopsis pithecellobii (isolates:1; rSTs:1)
          • Amycolatopsis pittospori (isolates:1; rSTs:1)
          • Amycolatopsis pretoriensis (isolates:2; rSTs:1)
          • Amycolatopsis regifaucium (isolates:3; rSTs:1)
          • Amycolatopsis rhabdoformis (isolates:1; rSTs:1)
          • Amycolatopsis rhizosphaerae (isolates:1; rSTs:1)
          • Amycolatopsis rifamycinica (isolates:1; rSTs:1)
          • Amycolatopsis roodepoortensis (isolates:2; rSTs:2)
          • Amycolatopsis ruanii (isolates:1; rSTs:1)
          • Amycolatopsis rubida (isolates:3; rSTs:1)
          • Amycolatopsis saalfeldensis (isolates:1; rSTs:1)
          • Amycolatopsis sacchari (isolates:1; rSTs:1)
          • Amycolatopsis samaneae (isolates:1; rSTs:1)
          • Amycolatopsis sp. (isolates:92; rSTs:83 tree)
          • Amycolatopsis suaedae (isolates:1; rSTs:1)
          • Amycolatopsis sulphurea (isolates:1; rSTs:1)
          • Amycolatopsis taiwanensis (isolates:2; rSTs:2)
          • Amycolatopsis thailandensis (isolates:1; rSTs:1)
          • Amycolatopsis thermalba (isolates:2; rSTs:2)
          • Amycolatopsis thermoflava (isolates:2; rSTs:2)
          • Amycolatopsis thermophila (isolates:1; rSTs:1)
          • Amycolatopsis tolypomycina (isolates:2; rSTs:2)
          • Amycolatopsis tucumanensis (isolates:2; rSTs:1)
          • Amycolatopsis ultiminotia (isolates:1; rSTs:1)
          • Amycolatopsis umgeniensis (isolates:1; rSTs:1)
          • Amycolatopsis vancoresmycina (isolates:2; rSTs:1)
          • Amycolatopsis vastitatis (isolates:1; rSTs:1)
          • Amycolatopsis viridis (isolates:1; rSTs:1)
          • Amycolatopsis xylanica (isolates:1; rSTs:1)
        • Crossiella (isolates:7; rSTs:5 tree)
          • Crossiella cryophila (isolates:1; rSTs:1)
          • Crossiella equi (isolates:2; rSTs:1)
          • Crossiella sp. (isolates:4; rSTs:3 tree)
        • Gandjariella (isolates:1; rSTs:1)
          • Gandjariella thermophila (isolates:1; rSTs:1)
        • Goodfellowiella (isolates:1; rSTs:1)
          • Goodfellowiella coeruleoviolacea (isolates:1; rSTs:1)
        • Haloechinothrix (isolates:5; rSTs:5 tree)
          • Haloechinothrix aidingensis (isolates:1; rSTs:1)
          • Haloechinothrix alba (isolates:1; rSTs:1)
          • Haloechinothrix halophila (isolates:1; rSTs:1)
          • Haloechinothrix salitolerans (isolates:1; rSTs:1)
          • Haloechinothrix sp. (isolates:1; rSTs:1)
        • Halosaccharopolyspora (isolates:1; rSTs:1)
          • Halosaccharopolyspora lacisalsi (isolates:1; rSTs:1)
        • Herbihabitans (isolates:1; rSTs:1)
          • Herbihabitans rhizosphaerae (isolates:1; rSTs:1)
        • Kibdelosporangium (isolates:9; rSTs:8 tree)
          • Kibdelosporangium aridum (isolates:3; rSTs:3 tree)
          • Kibdelosporangium banguiense (isolates:1; rSTs:1)
          • Kibdelosporangium persicum (isolates:1; rSTs:1)
          • Kibdelosporangium philippinense (isolates:1; rSTs:1)
          • Kibdelosporangium phytohabitans (isolates:2; rSTs:1)
          • Kibdelosporangium sp. (isolates:1; rSTs:1)
        • Kutzneria (isolates:9; rSTs:6 tree)
          • Kutzneria albida (isolates:2; rSTs:1)
          • Kutzneria buriramensis (isolates:1; rSTs:1)
          • Kutzneria chonburiensis (isolates:1; rSTs:1)
          • Kutzneria kofuensis (isolates:2; rSTs:1)
          • Kutzneria sp. (isolates:3; rSTs:2)
        • Labedaea (isolates:1; rSTs:1)
          • Labedaea rhizosphaerae (isolates:1; rSTs:1)
        • Lentzea (isolates:43; rSTs:39 tree)
          • Lentzea aerocolonigenes (isolates:3; rSTs:1)
          • Lentzea alba (isolates:1; rSTs:1)
          • Lentzea albida (isolates:1; rSTs:1)
          • Lentzea albidocapillata (isolates:3; rSTs:2)
          • Lentzea atacamensis (isolates:2; rSTs:2)
          • Lentzea californiensis (isolates:1; rSTs:1)
          • Lentzea cavernae (isolates:1; rSTs:1)
          • Lentzea flava (isolates:2; rSTs:1)
          • Lentzea flaviverrucosa (isolates:2; rSTs:1)
          • Lentzea fradiae (isolates:1; rSTs:1)
          • Lentzea guizhouensis (isolates:1; rSTs:1)
          • Lentzea indica (isolates:1; rSTs:1)
          • Lentzea jiangxiensis (isolates:1; rSTs:1)
          • Lentzea kentuckyensis (isolates:1; rSTs:1)
          • Lentzea kristufekii (isolates:1; rSTs:1)
          • Lentzea miocenica (isolates:1; rSTs:1)
          • Lentzea nigeriaca (isolates:1; rSTs:1)
          • Lentzea pudingi (isolates:1; rSTs:1)
          • Lentzea sokolovensis (isolates:1; rSTs:1)
          • Lentzea sp. (isolates:13; rSTs:14 tree)
          • Lentzea terrae (isolates:1; rSTs:1)
          • Lentzea tibetensis (isolates:1; rSTs:1)
          • Lentzea waywayandensis (isolates:1; rSTs:1)
          • Lentzea xinjiangensis (isolates:1; rSTs:1)
        • Longimycelium (isolates:1; rSTs:1)
          • Longimycelium tulufanense (isolates:1; rSTs:1)
        • Prauserella (isolates:21; rSTs:14 tree)
          • Prauserella aidingensis (isolates:1; rSTs:1)
          • Prauserella alba (isolates:2; rSTs:1)
          • Prauserella cavernicola (isolates:1; rSTs:1)
          • Prauserella coralliicola (isolates:1; rSTs:1)
          • Prauserella endophytica (isolates:1; rSTs:1)
          • Prauserella flavalba (isolates:1; rSTs:1)
          • Prauserella halophila (isolates:2; rSTs:1)
          • Prauserella isguenensis (isolates:1; rSTs:1)
          • Prauserella marina (isolates:3; rSTs:1)
          • Prauserella muralis (isolates:2; rSTs:1)
          • Prauserella rugosa (isolates:2; rSTs:1)
          • Prauserella sediminis (isolates:1; rSTs:1)
          • Prauserella shujinwangii (isolates:1; rSTs:1)
          • Prauserella sp. (isolates:2; rSTs:1)
        • Pseudonocardia (isolates:109; rSTs:87 tree)
          • Pseudonocardia abyssalis (isolates:2; rSTs:1)
          • Pseudonocardia acaciae (isolates:1; rSTs:1)
          • Pseudonocardia acidicola (isolates:1; rSTs:1)
          • Pseudonocardia adelaidensis (isolates:1; rSTs:1)
          • Pseudonocardia ailaonensis (isolates:1; rSTs:1)
          • Pseudonocardia alaniniphila (isolates:2; rSTs:1)
          • Pseudonocardia alni (isolates:4; rSTs:4 tree)
          • Pseudonocardia ammonioxydans (isolates:1; rSTs:1)
          • Pseudonocardia antarctica (isolates:2; rSTs:1)
          • Pseudonocardia asaccharolytica (isolates:2; rSTs:1)
          • Pseudonocardia aurantiaca (isolates:1; rSTs:1)
          • Pseudonocardia autotrophica (isolates:2; rSTs:1)
          • Pseudonocardia bannensis (isolates:1; rSTs:1)
          • Pseudonocardia broussonetiae (isolates:1; rSTs:1)
          • Pseudonocardia chloroethenivorans (isolates:1)
          • Pseudonocardia cypriaca (isolates:1; rSTs:1)
          • Pseudonocardia dioxanivorans (isolates:3; rSTs:2)
          • Pseudonocardia endophytica (isolates:1; rSTs:1)
          • Pseudonocardia eucalypti (isolates:2; rSTs:1)
          • Pseudonocardia halophobica (isolates:2; rSTs:1)
          • Pseudonocardia hierapolitana (isolates:1; rSTs:1)
          • Pseudonocardia humida (isolates:1; rSTs:1)
          • Pseudonocardia hydrocarbonoxydans (isolates:2; rSTs:1)
          • Pseudonocardia kongjuensis (isolates:1; rSTs:1)
          • Pseudonocardia kujensis (isolates:1; rSTs:1)
          • Pseudonocardia kunmingensis (isolates:1; rSTs:1)
          • Pseudonocardia lacus (isolates:1; rSTs:1)
          • Pseudonocardia nematodicida (isolates:1; rSTs:1)
          • Pseudonocardia nigra (isolates:1; rSTs:1)
          • Pseudonocardia oceani (isolates:5; rSTs:1)
          • Pseudonocardia oroxyli (isolates:1; rSTs:1)
          • Pseudonocardia parietis (isolates:1; rSTs:1)
          • Pseudonocardia petroleophila (isolates:2; rSTs:1)
          • Pseudonocardia pini (isolates:1; rSTs:1)
          • Pseudonocardia sediminis (isolates:1; rSTs:1)
          • Pseudonocardia sp. (isolates:44; rSTs:39 tree)
          • Pseudonocardia spinosispora (isolates:1; rSTs:1)
          • Pseudonocardia sulfidoxydans (isolates:1; rSTs:1)
          • Pseudonocardia terrae (isolates:1; rSTs:1)
          • Pseudonocardia tetrahydrofuranoxydans (isolates:1)
          • Pseudonocardia thermophila (isolates:1; rSTs:1)
          • Pseudonocardia tropica (isolates:2; rSTs:1)
          • Pseudonocardia xinjiangensis (isolates:1; rSTs:1)
          • Pseudonocardia xishanensis (isolates:1; rSTs:1)
          • Pseudonocardia yuanmonensis (isolates:1; rSTs:1)
          • Pseudonocardia yunnanensis (isolates:1; rSTs:1)
          • Pseudonocardia zijingensis (isolates:1; rSTs:1)
        • Qaidamihabitans (isolates:1; rSTs:1)
          • Qaidamihabitans albus (isolates:1; rSTs:1)
        • Saccharomonospora (isolates:20; rSTs:19 tree)
          • Saccharomonospora amisosensis (isolates:1; rSTs:1)
          • Saccharomonospora azurea (isolates:3; rSTs:3 tree)
          • Saccharomonospora cyanea (isolates:1; rSTs:1)
          • Saccharomonospora glauca (isolates:1; rSTs:1)
          • Saccharomonospora halophila (isolates:1; rSTs:1)
          • Saccharomonospora iraqiensis (isolates:2; rSTs:2)
          • Saccharomonospora marina (isolates:1; rSTs:1)
          • Saccharomonospora piscinae (isolates:3; rSTs:3 tree)
          • Saccharomonospora saliphila (isolates:1; rSTs:1)
          • Saccharomonospora sp. (isolates:1; rSTs:1)
          • Saccharomonospora viridis (isolates:3; rSTs:2)
          • Saccharomonospora xinjiangensis (isolates:2; rSTs:2)
        • Saccharopolyspora (isolates:71; rSTs:57 tree)
          • Saccharopolyspora antimicrobica (isolates:2; rSTs:2)
          • Saccharopolyspora aridisoli (isolates:1; rSTs:1)
          • Saccharopolyspora cebuensis (isolates:1; rSTs:1)
          • Saccharopolyspora dendranthemae (isolates:1; rSTs:1)
          • Saccharopolyspora elongata (isolates:1; rSTs:1)
          • Saccharopolyspora endophytica (isolates:1; rSTs:1)
          • Saccharopolyspora erythraea (isolates:7; rSTs:2)
          • Saccharopolyspora flava (isolates:1; rSTs:1)
          • Saccharopolyspora gloriosae (isolates:2; rSTs:2)
          • Saccharopolyspora gregorii (isolates:2; rSTs:2)
          • Saccharopolyspora halophila (isolates:1; rSTs:1)
          • Saccharopolyspora hirsuta (isolates:3; rSTs:2)
          • Saccharopolyspora hordei (isolates:2; rSTs:1)
          • Saccharopolyspora indica (isolates:2; rSTs:1)
          • Saccharopolyspora ipomoeae (isolates:1; rSTs:1)
          • Saccharopolyspora karakumensis (isolates:1; rSTs:1)
          • Saccharopolyspora kobensis (isolates:3; rSTs:1)
          • Saccharopolyspora mangrovi (isolates:1; rSTs:1)
          • Saccharopolyspora oryzae (isolates:1; rSTs:1)
          • Saccharopolyspora phatthalungensis (isolates:2; rSTs:1)
          • Saccharopolyspora pogona (isolates:1; rSTs:1)
          • Saccharopolyspora rectivirgula (isolates:2; rSTs:1)
          • Saccharopolyspora rhizosphaerae (isolates:1; rSTs:1)
          • Saccharopolyspora rosea (isolates:2; rSTs:2)
          • Saccharopolyspora shandongensis (isolates:6; rSTs:6 tree)
          • Saccharopolyspora soli (isolates:1; rSTs:1)
          • Saccharopolyspora sp. (isolates:16; rSTs:14 tree)
          • Saccharopolyspora spinosa (isolates:3; rSTs:3 tree)
          • Saccharopolyspora subtropica (isolates:1; rSTs:1)
          • Saccharopolyspora taberi (isolates:1; rSTs:1)
          • Saccharopolyspora terrae (isolates:1; rSTs:1)
        • Saccharothrix (isolates:36; rSTs:31 tree)
          • Saccharothrix algeriensis (isolates:1; rSTs:1)
          • Saccharothrix australiensis (isolates:1; rSTs:1)
          • Saccharothrix carnea (isolates:1; rSTs:1)
          • Saccharothrix coeruleofusca (isolates:2; rSTs:2)
          • Saccharothrix deserti (isolates:1; rSTs:1)
          • Saccharothrix ecbatanensis (isolates:1; rSTs:1)
          • Saccharothrix espanaensis (isolates:1; rSTs:1)
          • Saccharothrix longispora (isolates:3; rSTs:2)
          • Saccharothrix luteola (isolates:1; rSTs:1)
          • Saccharothrix mutabilis (isolates:1; rSTs:1)
          • Saccharothrix obliqua (isolates:1; rSTs:1)
          • Saccharothrix saharensis (isolates:1; rSTs:1)
          • Saccharothrix sp. (isolates:12; rSTs:9 tree)
          • Saccharothrix syringae (isolates:2; rSTs:2)
          • Saccharothrix tamanrassetensis (isolates:1; rSTs:1)
          • Saccharothrix texasensis (isolates:1; rSTs:1)
          • Saccharothrix variisporea (isolates:1; rSTs:1)
          • Saccharothrix violaceirubra (isolates:2; rSTs:1)
          • Saccharothrix xinjiangensis (isolates:1; rSTs:1)
          • Saccharothrix yanglingensis (isolates:1; rSTs:1)
        • Sciscionella (isolates:2; rSTs:2)
          • Sciscionella marina (isolates:1; rSTs:1)
          • Sciscionella sediminilitoris (isolates:1; rSTs:1)
        • Solihabitans (isolates:1; rSTs:1)
          • Solihabitans fulvus (isolates:1; rSTs:1)
        • Streptoalloteichus (isolates:2; rSTs:2)
          • Streptoalloteichus hindustanus (isolates:1; rSTs:1)
          • Streptoalloteichus tenebrarius (isolates:1; rSTs:1)
        • Tamaricihabitans (isolates:1; rSTs:1)
          • Tamaricihabitans halophyticus (isolates:1; rSTs:1)
        • Thermocrispum (isolates:2; rSTs:2)
          • Thermocrispum agreste (isolates:1; rSTs:1)
          • Thermocrispum municipale (isolates:1; rSTs:1)
        • Umezawaea (isolates:5; rSTs:4 tree)
          • Umezawaea beigongshangensis (isolates:1; rSTs:1)
          • Umezawaea endophytica (isolates:1; rSTs:1)
          • Umezawaea sp. (isolates:1; rSTs:1)
          • Umezawaea tangerina (isolates:2; rSTs:1)
    • Sporichthyales (isolates:3; rSTs:3 tree)
      • Sporichthyaceae (isolates:3; rSTs:3 tree)
        • Epidermidibacterium (isolates:1; rSTs:1)
          • Epidermidibacterium keratini (isolates:1; rSTs:1)
        • Sporichthya (isolates:2; rSTs:2)
          • Sporichthya brevicatena (isolates:1; rSTs:1)
          • Sporichthya polymorpha (isolates:1; rSTs:1)
    • Streptosporangiales (isolates:686; rSTs:581 tree)
      • Nocardiopsidaceae (isolates:146; rSTs:122)
        • Actinorugispora (isolates:1; rSTs:1)
          • Actinorugispora endophytica (isolates:1; rSTs:1)
        • Allosalinactinospora (isolates:1; rSTs:1)
          • Allosalinactinospora lopnorensis (isolates:1; rSTs:1)
        • Haloactinospora (isolates:1; rSTs:1)
          • Haloactinospora alba (isolates:1; rSTs:1)
        • Lipingzhangella (isolates:1; rSTs:1)
          • Lipingzhangella halophila (isolates:1; rSTs:1)
        • Marinactinospora (isolates:1; rSTs:1)
          • Marinactinospora thermotolerans (isolates:1; rSTs:1)
        • Marinitenerispora (isolates:3; rSTs:1)
          • Marinitenerispora sediminis (isolates:3; rSTs:1)
        • Murinocardiopsis (isolates:1; rSTs:1)
          • Murinocardiopsis flavida (isolates:1; rSTs:1)
        • Nocardiopsis (isolates:110; rSTs:93)
          • Nocardiopsis aegyptia (isolates:1; rSTs:1)
          • Nocardiopsis akebiae (isolates:1; rSTs:1)
          • Nocardiopsis alba (isolates:16; rSTs:14)
          • Nocardiopsis alborubida (isolates:2; rSTs:1)
          • Nocardiopsis algeriensis (isolates:1; rSTs:1)
          • Nocardiopsis alkaliphila (isolates:1; rSTs:1)
          • Nocardiopsis baichengensis (isolates:1; rSTs:1)
          • Nocardiopsis changdeensis (isolates:1; rSTs:1)
          • Nocardiopsis chromatogenes (isolates:1; rSTs:1)
          • Nocardiopsis composta (isolates:2; rSTs:1)
          • Nocardiopsis coralli (isolates:1; rSTs:1)
          • Nocardiopsis dassonvillei (isolates:11; rSTs:7)
          • Nocardiopsis deserti (isolates:1; rSTs:1)
          • Nocardiopsis endophytica (isolates:1; rSTs:1)
          • Nocardiopsis exhalans (isolates:2; rSTs:1)
          • Nocardiopsis flavescens (isolates:1; rSTs:1)
          • Nocardiopsis ganjiahuensis (isolates:1; rSTs:1)
          • Nocardiopsis gilva (isolates:2; rSTs:2)
          • Nocardiopsis halophila (isolates:1; rSTs:1)
          • Nocardiopsis halotolerans (isolates:1; rSTs:1)
          • Nocardiopsis kunsanensis (isolates:2; rSTs:2)
          • Nocardiopsis listeri (isolates:1; rSTs:1)
          • Nocardiopsis lucentensis (isolates:1; rSTs:1)
          • Nocardiopsis metallicus (isolates:2; rSTs:1)
          • Nocardiopsis mwathae (isolates:1; rSTs:1)
          • Nocardiopsis potens (isolates:1; rSTs:1)
          • Nocardiopsis prasina (isolates:1; rSTs:1)
          • Nocardiopsis quinghaiensis (isolates:1; rSTs:1)
          • Nocardiopsis rhodophaea (isolates:1; rSTs:1)
          • Nocardiopsis rosea (isolates:1; rSTs:1)
          • Nocardiopsis salina (isolates:1; rSTs:1)
          • Nocardiopsis sinuspersici (isolates:2; rSTs:2)
          • Nocardiopsis sp. (isolates:35; rSTs:31)
          • Nocardiopsis suaedae (isolates:1; rSTs:1)
          • Nocardiopsis synnemataformans (isolates:1; rSTs:1)
          • Nocardiopsis terrae (isolates:2; rSTs:1)
          • Nocardiopsis trehalosi (isolates:1; rSTs:1)
          • Nocardiopsis umidischolae (isolates:4; rSTs:2)
          • Nocardiopsis valliformis (isolates:1; rSTs:1)
          • Nocardiopsis xinjiangensis (isolates:1; rSTs:1)
        • Salinactinospora (isolates:1; rSTs:1)
          • Salinactinospora qingdaonensis (isolates:1; rSTs:1)
        • Spinactinospora (isolates:2; rSTs:1)
          • Spinactinospora alkalitolerans (isolates:2; rSTs:1)
        • Spiractinospora (isolates:1; rSTs:1)
          • Spiractinospora alimapuensis (isolates:1; rSTs:1)
        • Streptomonospora (isolates:12; rSTs:11)
          • Streptomonospora alba (isolates:1; rSTs:1)
          • Streptomonospora arabica (isolates:1; rSTs:1)
          • Streptomonospora halophila (isolates:1; rSTs:1)
          • Streptomonospora litoralis (isolates:1; rSTs:1)
          • Streptomonospora mangrovi (isolates:1; rSTs:1)
          • Streptomonospora nanhaiensis (isolates:3; rSTs:3)
          • Streptomonospora salina (isolates:2; rSTs:1)
          • Streptomonospora sp. (isolates:2; rSTs:2)
        • Thermobifida (isolates:11; rSTs:8)
          • Thermobifida alba (isolates:2; rSTs:1)
          • Thermobifida cellulosilytica (isolates:1; rSTs:1)
          • Thermobifida fusca (isolates:6; rSTs:5)
          • Thermobifida halotolerans (isolates:2; rSTs:1)
      • Streptosporangiaceae (isolates:387; rSTs:333 tree)
        • Acrocarpospora (isolates:8; rSTs:6 tree)
          • Acrocarpospora catenulata (isolates:1; rSTs:1)
          • Acrocarpospora corrugata (isolates:2; rSTs:1)
          • Acrocarpospora macrocephala (isolates:2; rSTs:1)
          • Acrocarpospora phusangensis (isolates:1; rSTs:1)
          • Acrocarpospora pleiomorpha (isolates:1; rSTs:1)
          • Acrocarpospora sp. (isolates:1; rSTs:1)
        • Bailinhaonella (isolates:1; rSTs:1)
          • Bailinhaonella thermotolerans (isolates:1; rSTs:1)
        • Herbidospora (isolates:8; rSTs:9 tree)
          • Herbidospora cretacea (isolates:1; rSTs:1)
          • Herbidospora daliensis (isolates:1; rSTs:1)
          • Herbidospora galbida (isolates:1; rSTs:1)
          • Herbidospora mongoliensis (isolates:1; rSTs:1)
          • Herbidospora sakaeratensis (isolates:1; rSTs:1)
          • Herbidospora solisilvae (isolates:1; rSTs:1)
          • Herbidospora sp. (isolates:1; rSTs:2)
          • Herbidospora yilanensis (isolates:1; rSTs:1)
        • Microbispora (isolates:57; rSTs:46 tree)
          • Microbispora amethystogenes (isolates:3; rSTs:2)
          • Microbispora bryophytorum (isolates:7; rSTs:5 tree)
          • Microbispora camponoti (isolates:1; rSTs:1)
          • Microbispora catharanthi (isolates:1; rSTs:1)
          • Microbispora cellulosiformans (isolates:1; rSTs:1)
          • Microbispora corallina (isolates:2; rSTs:1)
          • Microbispora fusca (isolates:1; rSTs:1)
          • Microbispora hainanensis (isolates:5; rSTs:5 tree)
          • Microbispora oryzae (isolates:1; rSTs:1)
          • Microbispora rosea (isolates:10; rSTs:5 tree)
          • Microbispora siamensis (isolates:1; rSTs:1)
          • Microbispora sitophila (isolates:1; rSTs:1)
          • Microbispora sp. (isolates:21; rSTs:19 tree)
          • Microbispora tritici (isolates:1; rSTs:1)
          • Microbispora triticiradicis (isolates:1; rSTs:1)
        • Microtetraspora (isolates:6; rSTs:6 tree)
          • Microtetraspora fusca (isolates:1; rSTs:1)
          • Microtetraspora glauca (isolates:2; rSTs:2)
          • Microtetraspora malaysiensis (isolates:1; rSTs:1)
          • Microtetraspora niveoalba (isolates:1; rSTs:1)
          • Microtetraspora sp. (isolates:1; rSTs:1)
        • Nonomuraea (isolates:177; rSTs:156 tree)
          • Nonomuraea africana (isolates:3; rSTs:2)
          • Nonomuraea angiospora (isolates:6; rSTs:5 tree)
          • Nonomuraea antimicrobica (isolates:1; rSTs:1)
          • Nonomuraea antri (isolates:1; rSTs:1)
          • Nonomuraea aridisoli (isolates:1; rSTs:1)
          • Nonomuraea aurantiaca (isolates:1; rSTs:1)
          • Nonomuraea bangladeshensis (isolates:2; rSTs:2)
          • Nonomuraea basaltis (isolates:1; rSTs:1)
          • Nonomuraea candida (isolates:1; rSTs:1)
          • Nonomuraea cavernae (isolates:3; rSTs:2)
          • Nonomuraea ceibae (isolates:1; rSTs:1)
          • Nonomuraea composti (isolates:1; rSTs:1)
          • Nonomuraea corallina (isolates:1)
          • Nonomuraea coxensis (isolates:2; rSTs:1)
          • Nonomuraea cypriaca (isolates:1; rSTs:1)
          • Nonomuraea deserti (isolates:1; rSTs:1)
          • Nonomuraea diastatica (isolates:1; rSTs:1)
          • Nonomuraea dietziae (isolates:7; rSTs:5 tree)
          • Nonomuraea endophytica (isolates:1; rSTs:1)
          • Nonomuraea fuscirosea (isolates:7; rSTs:7 tree)
          • Nonomuraea gerenzanensis (isolates:1; rSTs:1)
          • Nonomuraea glycinis (isolates:4; rSTs:3 tree)
          • Nonomuraea guangzhouensis (isolates:1; rSTs:1)
          • Nonomuraea harbinensis (isolates:1; rSTs:1)
          • Nonomuraea helvata (isolates:1; rSTs:1)
          • Nonomuraea indica (isolates:1; rSTs:1)
          • Nonomuraea jabiensis (isolates:2; rSTs:2)
          • Nonomuraea jiangxiensis (isolates:1; rSTs:1)
          • Nonomuraea kuesteri (isolates:1; rSTs:1)
          • Nonomuraea lactucae (isolates:1; rSTs:1)
          • Nonomuraea longicatena (isolates:1)
          • Nonomuraea longispora (isolates:1; rSTs:1)
          • Nonomuraea maheshkhaliensis (isolates:1; rSTs:1)
          • Nonomuraea maritima (isolates:1; rSTs:1)
          • Nonomuraea mesophila (isolates:1; rSTs:1)
          • Nonomuraea monospora (isolates:1; rSTs:1)
          • Nonomuraea montanisoli (isolates:1; rSTs:1)
          • Nonomuraea muscovyensis (isolates:2; rSTs:2)
          • Nonomuraea phyllanthi (isolates:2; rSTs:2)
          • Nonomuraea polychroma (isolates:1; rSTs:1)
          • Nonomuraea pusilla (isolates:4; rSTs:2)
          • Nonomuraea rhizosphaerae (isolates:1; rSTs:1)
          • Nonomuraea rhodomycinica (isolates:1; rSTs:1)
          • Nonomuraea rosea (isolates:1; rSTs:1)
          • Nonomuraea roseola (isolates:1; rSTs:1)
          • Nonomuraea roseoviolacea (isolates:3; rSTs:2)
          • Nonomuraea rubra (isolates:4; rSTs:2)
          • Nonomuraea salmonea (isolates:1; rSTs:1)
          • Nonomuraea sediminis (isolates:1; rSTs:1)
          • Nonomuraea solani (isolates:1; rSTs:1)
          • Nonomuraea soli (isolates:2; rSTs:1)
          • Nonomuraea sp. (isolates:73; rSTs:70 tree)
          • Nonomuraea spiralis (isolates:1; rSTs:1)
          • Nonomuraea terrae (isolates:1; rSTs:1)
          • Nonomuraea thailandensis (isolates:2; rSTs:1)
          • Nonomuraea turkmeniaca (isolates:1; rSTs:1)
          • Nonomuraea typhae (isolates:1; rSTs:1)
          • Nonomuraea wenchangensis (isolates:6; rSTs:5 tree)
          • Nonomuraea zeae (isolates:1; rSTs:1)
          • [Actinomadura] parvosata (isolates:2; rSTs:1)
        • Planobispora (isolates:6; rSTs:5 tree)
          • Planobispora longispora (isolates:1; rSTs:1)
          • Planobispora rosea (isolates:3; rSTs:2)
          • Planobispora siamensis (isolates:1; rSTs:1)
          • Planobispora takensis (isolates:1; rSTs:1)
        • Planomonospora (isolates:8; rSTs:7 tree)
          • Planomonospora alba (isolates:1; rSTs:1)
          • Planomonospora parontospora (isolates:1; rSTs:1)
          • Planomonospora sp. (isolates:3; rSTs:3 tree)
          • Planomonospora sphaerica (isolates:1; rSTs:1)
          • Planomonospora venezuelensis (isolates:2; rSTs:1)
        • Planotetraspora (isolates:9; rSTs:8 tree)
          • Planotetraspora kaengkrachanensis (isolates:2; rSTs:2)
          • Planotetraspora mira (isolates:1; rSTs:1)
          • Planotetraspora phitsanulokensis (isolates:2; rSTs:2)
          • Planotetraspora silvatica (isolates:2; rSTs:1)
          • Planotetraspora sp. (isolates:1; rSTs:1)
          • Planotetraspora thailandica (isolates:1; rSTs:1)
        • Rhizohabitans (isolates:1; rSTs:1)
          • Rhizohabitans arisaemae (isolates:1; rSTs:1)
        • Sinosporangium (isolates:2; rSTs:2)
          • Sinosporangium album (isolates:1; rSTs:1)
          • Sinosporangium siamense (isolates:1; rSTs:1)
        • Sphaerimonospora (isolates:3; rSTs:2)
          • Sphaerimonospora mesophila (isolates:2; rSTs:1)
          • Sphaerimonospora thailandensis (isolates:1; rSTs:1)
        • Sphaerisporangium (isolates:23; rSTs:17 tree)
          • Sphaerisporangium album (isolates:1; rSTs:1)
          • Sphaerisporangium corydalis (isolates:1; rSTs:1)
          • Sphaerisporangium flaviroseum (isolates:1; rSTs:1)
          • Sphaerisporangium fuscum (isolates:1; rSTs:1)
          • Sphaerisporangium krabiense (isolates:2; rSTs:1)
          • Sphaerisporangium melleum (isolates:2; rSTs:1)
          • Sphaerisporangium perillae (isolates:1; rSTs:1)
          • Sphaerisporangium rubeum (isolates:2; rSTs:1)
          • Sphaerisporangium rufum (isolates:1; rSTs:1)
          • Sphaerisporangium siamense (isolates:2; rSTs:1)
          • Sphaerisporangium sp. (isolates:8; rSTs:7 tree)
          • Sphaerisporangium viridialbum (isolates:1)
        • Spongiactinospora (isolates:3; rSTs:3 tree)
          • Spongiactinospora gelatinilytica (isolates:1; rSTs:1)
          • Spongiactinospora rosea (isolates:1; rSTs:1)
          • Spongiactinospora sp. (isolates:1; rSTs:1)
        • Streptosporangium (isolates:66; rSTs:57 tree)
          • Streptosporangium album (isolates:2; rSTs:1)
          • Streptosporangium amethystogenes (isolates:2; rSTs:1)
          • Streptosporangium becharense (isolates:2; rSTs:1)
          • Streptosporangium brasiliense (isolates:1; rSTs:1)
          • Streptosporangium canum (isolates:7; rSTs:6 tree)
          • Streptosporangium carneum (isolates:2; rSTs:1)
          • Streptosporangium fragile (isolates:1; rSTs:1)
          • Streptosporangium longisporum (isolates:1; rSTs:1)
          • Streptosporangium lutulentum (isolates:1; rSTs:1)
          • Streptosporangium minutum (isolates:1; rSTs:1)
          • Streptosporangium oxazolinicum (isolates:1; rSTs:1)
          • Streptosporangium pseudovulgare (isolates:1; rSTs:1)
          • Streptosporangium roseum (isolates:5; rSTs:3 tree)
          • Streptosporangium saharense (isolates:3; rSTs:3 tree)
          • Streptosporangium sandarakinum (isolates:3; rSTs:3 tree)
          • Streptosporangium sp. (isolates:29; rSTs:28 tree)
          • Streptosporangium subroseum (isolates:2; rSTs:2)
          • Streptosporangium violaceochromogenes (isolates:1; rSTs:1)
          • Streptosporangium vulgare (isolates:1)
        • Thermoactinospora (isolates:1; rSTs:1)
          • Thermoactinospora rubra (isolates:1; rSTs:1)
        • Thermobispora (isolates:3; rSTs:3 tree)
          • Thermobispora bispora (isolates:3; rSTs:3 tree)
        • Thermocatellispora (isolates:2; rSTs:1)
          • Thermocatellispora tengchongensis (isolates:2; rSTs:1)
        • Thermopolyspora (isolates:3; rSTs:2)
          • Thermopolyspora flexuosa (isolates:2; rSTs:1)
          • Thermopolyspora sp. (isolates:1; rSTs:1)
      • Thermomonosporaceae (isolates:151; rSTs:124 tree)
        • Actinoallomurus (isolates:15; rSTs:13 tree)
          • Actinoallomurus bryophytorum (isolates:1; rSTs:1)
          • Actinoallomurus iriomotensis (isolates:2; rSTs:2)
          • Actinoallomurus liliacearum (isolates:1; rSTs:1)
          • Actinoallomurus oryzae (isolates:1; rSTs:1)
          • Actinoallomurus purpureus (isolates:1; rSTs:1)
          • Actinoallomurus rhizosphaericola (isolates:1; rSTs:1)
          • Actinoallomurus soli (isolates:1; rSTs:1)
          • Actinoallomurus sp. (isolates:4; rSTs:3 tree)
          • Actinoallomurus spadix (isolates:2; rSTs:1)
          • Actinoallomurus vinaceus (isolates:1; rSTs:1)
        • Actinocorallia (isolates:8; rSTs:7 tree)
          • Actinocorallia aurantiaca (isolates:1)
          • Actinocorallia herbida (isolates:1; rSTs:1)
          • Actinocorallia libanotica (isolates:1; rSTs:1)
          • Actinocorallia longicatena (isolates:1; rSTs:1)
          • Actinocorallia populi (isolates:1; rSTs:1)
          • Actinocorallia sp. (isolates:3; rSTs:3 tree)
        • Actinomadura (isolates:120; rSTs:96 tree)
          • Actinomadura alba (isolates:2; rSTs:1)
          • Actinomadura algeriensis (isolates:1; rSTs:1)
          • Actinomadura atramentaria (isolates:1; rSTs:1)
          • Actinomadura bangladeshensis (isolates:2; rSTs:1)
          • Actinomadura barringtoniae (isolates:1; rSTs:1)
          • Actinomadura catellatispora (isolates:2; rSTs:1)
          • Actinomadura chibensis (isolates:2; rSTs:1)
          • Actinomadura chokoriensis (isolates:1)
          • Actinomadura citrea (isolates:3; rSTs:2)
          • Actinomadura coerulea (isolates:3; rSTs:2)
          • Actinomadura craniellae (isolates:1; rSTs:1)
          • Actinomadura cremea (isolates:1; rSTs:1)
          • Actinomadura darangshiensis (isolates:1; rSTs:1)
          • Actinomadura decatromicini (isolates:1; rSTs:1)
          • Actinomadura fibrosa (isolates:1; rSTs:1)
          • Actinomadura flavalba (isolates:1; rSTs:1)
          • Actinomadura formosensis (isolates:2; rSTs:1)
          • Actinomadura fulvescens (isolates:1; rSTs:1)
          • Actinomadura geliboluensis (isolates:2; rSTs:1)
          • Actinomadura graeca (isolates:1; rSTs:1)
          • Actinomadura hallensis (isolates:1; rSTs:1)
          • Actinomadura harenae (isolates:1; rSTs:1)
          • Actinomadura hibisca (isolates:1; rSTs:1)
          • Actinomadura keratinilytica (isolates:1)
          • Actinomadura kijaniata (isolates:1; rSTs:1)
          • Actinomadura latina (isolates:2; rSTs:1)
          • Actinomadura litoris (isolates:2; rSTs:1)
          • Actinomadura logoneensis (isolates:1; rSTs:1)
          • Actinomadura luteofluorescens (isolates:2; rSTs:2)
          • Actinomadura luzonensis (isolates:1; rSTs:1)
          • Actinomadura macra (isolates:1; rSTs:1)
          • Actinomadura macrotermitis (isolates:1; rSTs:1)
          • Actinomadura madurae (isolates:10; rSTs:8 tree)
          • Actinomadura meridiana (isolates:1; rSTs:1)
          • Actinomadura mexicana (isolates:1; rSTs:1)
          • Actinomadura meyerae (isolates:1; rSTs:1)
          • Actinomadura miaoliensis (isolates:1; rSTs:1)
          • Actinomadura montaniterrae (isolates:1; rSTs:1)
          • Actinomadura namibiensis (isolates:2; rSTs:1)
          • Actinomadura napierensis (isolates:1)
          • Actinomadura nitritigenes (isolates:2; rSTs:1)
          • Actinomadura oligospora (isolates:1; rSTs:1)
          • Actinomadura parmotrematis (isolates:1; rSTs:1)
          • Actinomadura pelletieri (isolates:1; rSTs:1)
          • Actinomadura physcomitrii (isolates:1; rSTs:1)
          • Actinomadura rayongensis (isolates:1; rSTs:1)
          • Actinomadura rifamycini (isolates:1; rSTs:1)
          • Actinomadura roseirufa (isolates:1; rSTs:1)
          • Actinomadura rubrisoli (isolates:1; rSTs:1)
          • Actinomadura rubrobrunea (isolates:2; rSTs:1)
          • Actinomadura rubteroloni (isolates:1; rSTs:1)
          • Actinomadura rudentiformis (isolates:1; rSTs:1)
          • Actinomadura rupiterrae (isolates:1; rSTs:1)
          • Actinomadura soli (isolates:1; rSTs:1)
          • Actinomadura sp. (isolates:32; rSTs:27 tree)
          • Actinomadura spongiicola (isolates:1; rSTs:1)
          • Actinomadura syzygii (isolates:1; rSTs:1)
          • Actinomadura terrae (isolates:1; rSTs:1)
          • Actinomadura verrucosospora (isolates:1; rSTs:1)
          • Actinomadura vinacea (isolates:1; rSTs:1)
          • Actinomadura violacea (isolates:1; rSTs:1)
          • Actinomadura viridis (isolates:2; rSTs:1)
          • Actinomadura xylanilytica (isolates:1; rSTs:1)
        • Spirillospora (isolates:1; rSTs:1)
          • Spirillospora sp. (isolates:1; rSTs:1)
        • Thermomonospora (isolates:6; rSTs:6 tree)
          • Thermomonospora amylolytica (isolates:1; rSTs:1)
          • Thermomonospora catenispora (isolates:1; rSTs:1)
          • Thermomonospora cellulosilytica (isolates:1; rSTs:1)
          • Thermomonospora curvata (isolates:1; rSTs:1)
          • Thermomonospora echinospora (isolates:1; rSTs:1)
          • Thermomonospora umbrina (isolates:1; rSTs:1)
        • Thermostaphylospora (isolates:1; rSTs:1)
          • Thermostaphylospora chromogena (isolates:1; rSTs:1)
      • Treboniaceae (isolates:1; rSTs:1)
        • Trebonia (isolates:1; rSTs:1)
          • Trebonia kvetii (isolates:1; rSTs:1)
  • Candidatus Humimicrobiia (isolates:2)
    • Candidatus Humimicrobiales (isolates:2)
      • Candidatus Calidifonticultoraceae (isolates:1)
        • Candidatus Calidifonticultor (isolates:1)
          • Candidatus Calidifonticultor daggyaiensis (isolates:1)
      • Candidatus Humimicrobiaceae (isolates:1)
        • Candidatus Humimicrobium (isolates:1)
          • Candidatus Humimicrobium oleiphilum (isolates:1)
  • Coriobacteriia (isolates:688; rSTs:473 tree)
    • Anaerosomatales (isolates:2; rSTs:2)
      • Anaerosomataceae (isolates:2; rSTs:2)
        • Anaerosoma (isolates:1; rSTs:1)
          • Anaerosoma tenue (isolates:1; rSTs:1)
        • Parvivirga (isolates:1; rSTs:1)
          • Parvivirga hydrogeniphila (isolates:1; rSTs:1)
    • Coriobacteriales (isolates:426; rSTs:287 tree)
      • Atopobiaceae (isolates:57; rSTs:46 tree)
        • Atopobium (isolates:6; rSTs:5 tree)
          • Atopobium deltae (isolates:1; rSTs:1)
          • Atopobium fossor (isolates:1; rSTs:1)
          • Atopobium minutum (isolates:3; rSTs:2)
          • Atopobium sp. (isolates:1; rSTs:1)
        • Fannyhessea (isolates:7; rSTs:4 tree)
          • Fannyhessea vaginae (isolates:7; rSTs:4 tree)
        • Lancefieldella (isolates:6; rSTs:4 tree)
          • Lancefieldella parvula (isolates:2; rSTs:2)
          • Lancefieldella rimae (isolates:3; rSTs:1)
          • Lancefieldella sp. (isolates:1; rSTs:1)
        • Olsenella (isolates:15; rSTs:13 tree)
          • Olsenella massiliensis (isolates:1; rSTs:1)
          • Olsenella phocaeensis (isolates:1; rSTs:1)
          • Olsenella porci (isolates:1; rSTs:1)
          • Olsenella profusa (isolates:2; rSTs:2)
          • Olsenella sp. (isolates:4; rSTs:4 tree)
          • Olsenella timonensis (isolates:1; rSTs:1)
          • Olsenella uli (isolates:4; rSTs:2)
          • Olsenella urininfantis (isolates:1; rSTs:1)
        • Parafannyhessea (isolates:6; rSTs:6 tree)
          • Parafannyhessea umbonata (isolates:6; rSTs:6 tree)
        • Paratractidigestivibacter (isolates:2; rSTs:2)
          • Paratractidigestivibacter faecalis (isolates:2; rSTs:2)
        • Parolsenella (isolates:8; rSTs:5 tree)
          • Parolsenella catena (isolates:7; rSTs:4 tree)
          • Parolsenella massiliensis (isolates:1; rSTs:1)
        • Thermophilibacter (isolates:5; rSTs:5 tree)
          • Thermophilibacter gallinarum (isolates:1; rSTs:1)
          • Thermophilibacter immobilis (isolates:1; rSTs:1)
          • Thermophilibacter mediterraneus (isolates:1; rSTs:1)
          • Thermophilibacter provencensis (isolates:1; rSTs:1)
          • Thermophilibacter sp. (isolates:1; rSTs:1)
        • Tractidigestivibacter (isolates:2; rSTs:2)
          • Tractidigestivibacter montrealensis (isolates:1; rSTs:1)
          • Tractidigestivibacter scatoligenes (isolates:1; rSTs:1)
      • Coriobacteriaceae (isolates:365; rSTs:238 tree)
        • Collinsella (isolates:344; rSTs:222 tree)
          • Candidatus Collinsella stercoripullorum (isolates:3; rSTs:3 tree)
          • Collinsella acetigenes (isolates:1; rSTs:1)
          • Collinsella aerofaciens (isolates:201; rSTs:110 tree)
          • Collinsella bouchesdurhonensis (isolates:4; rSTs:3 tree)
          • Collinsella ihumii (isolates:5; rSTs:3 tree)
          • Collinsella intestinalis (isolates:8; rSTs:6 tree)
          • Collinsella phocaeensis (isolates:1; rSTs:1)
          • Collinsella provencensis (isolates:1; rSTs:1)
          • Collinsella sp. (isolates:109; rSTs:88 tree)
          • Collinsella stercoris (isolates:4; rSTs:1)
          • Collinsella tanakaei (isolates:6; rSTs:4 tree)
          • Collinsella vaginalis (isolates:1; rSTs:1)
        • Coriobacterium (isolates:1; rSTs:1)
          • Coriobacterium glomerans (isolates:1; rSTs:1)
        • Enorma (isolates:10; rSTs:9 tree)
          • Enorma burkinafasonensis (isolates:1; rSTs:1)
          • Enorma massiliensis (isolates:5; rSTs:5 tree)
          • Enorma phocaeensis (isolates:1; rSTs:1)
          • Enorma shizhengliae (isolates:2; rSTs:1)
          • Enorma timonensis (isolates:1; rSTs:1)
        • Olegusella (isolates:2; rSTs:1)
          • Olegusella massiliensis (isolates:2; rSTs:1)
        • Parvibacter (isolates:4; rSTs:2)
          • Parvibacter caecicola (isolates:4; rSTs:2)
        • Senegalimassilia (isolates:4; rSTs:3 tree)
          • Senegalimassilia anaerobia (isolates:3; rSTs:2)
          • Senegalimassilia faecalis (isolates:1; rSTs:1)
      • Kribbibacteriaceae (isolates:4; rSTs:3 tree)
        • Granulimonas (isolates:1; rSTs:1)
          • Granulimonas faecalis (isolates:1; rSTs:1)
        • Kribbibacterium (isolates:2; rSTs:1)
          • Kribbibacterium absianum (isolates:2; rSTs:1)
        • Leptogranulimonas (isolates:1; rSTs:1)
          • Leptogranulimonas caecicola (isolates:1; rSTs:1)
    • Eggerthellales (isolates:260; rSTs:184 tree)
      • Eggerthellaceae (isolates:260; rSTs:184 tree)
        • Adlercreutzia (isolates:41; rSTs:38 tree)
          • Adlercreutzia agrestimuris (isolates:1; rSTs:1)
          • Adlercreutzia aquisgranensis (isolates:1; rSTs:1)
          • Adlercreutzia caecimuris (isolates:6; rSTs:6 tree)
          • Adlercreutzia equolifaciens (isolates:10; rSTs:8 tree)
          • Adlercreutzia faecimuris (isolates:1; rSTs:1)
          • Adlercreutzia hattorii (isolates:1; rSTs:1)
          • Adlercreutzia mucosicola (isolates:4; rSTs:3 tree)
          • Adlercreutzia murintestinalis (isolates:1; rSTs:1)
          • Adlercreutzia muris (isolates:5; rSTs:4 tree)
          • Adlercreutzia rubneri (isolates:2; rSTs:2)
          • Adlercreutzia sp. (isolates:9; rSTs:10 tree)
        • Anaerotardibacter (isolates:1)
          • Anaerotardibacter muris (isolates:1)
        • Arabiibacter (isolates:2; rSTs:1)
          • Arabiibacter massiliensis (isolates:2; rSTs:1)
        • Berryella (isolates:3; rSTs:3 tree)
          • Berryella intestinalis (isolates:1; rSTs:1)
          • Berryella wangjianweii (isolates:2; rSTs:2)
        • Cryptobacterium (isolates:1; rSTs:1)
          • Cryptobacterium curtum (isolates:1; rSTs:1)
        • Curtanaerobium (isolates:2; rSTs:1)
          • Curtanaerobium respiraculi (isolates:2; rSTs:1)
        • Denitrobacterium (isolates:2; rSTs:1)
          • Denitrobacterium detoxificans (isolates:2; rSTs:1)
        • Eggerthella (isolates:139; rSTs:91 tree)
          • Eggerthella guodeyinii (isolates:2; rSTs:2)
          • Eggerthella lenta (isolates:126; rSTs:80 tree)
          • Eggerthella sinensis (isolates:4; rSTs:2)
          • Eggerthella sp. (isolates:6; rSTs:6 tree)
          • Eggerthella timonensis (isolates:1; rSTs:1)
        • Ellagibacter (isolates:1; rSTs:1)
          • Ellagibacter isourolithinifaciens (isolates:1; rSTs:1)
        • Enterorhabdus (isolates:1; rSTs:1)
          • Enterorhabdus sp. (isolates:1; rSTs:1)
        • Enteroscipio (isolates:2; rSTs:1)
          • Enteroscipio rubneri (isolates:2; rSTs:1)
        • Gordonibacter (isolates:26; rSTs:17 tree)
          • Gordonibacter faecis (isolates:1; rSTs:1)
          • Gordonibacter massiliensis (isolates:3; rSTs:3 tree)
          • Gordonibacter pamelaeae (isolates:6; rSTs:3 tree)
          • Gordonibacter sp. (isolates:3; rSTs:3 tree)
          • Gordonibacter urolithinfaciens (isolates:13; rSTs:7 tree)
        • Hugonella (isolates:1; rSTs:1)
          • Hugonella massiliensis (isolates:1; rSTs:1)
        • Paraeggerthella (isolates:3; rSTs:4 tree)
          • Paraeggerthella hominis (isolates:1; rSTs:1)
          • Paraeggerthella hongkongensis (isolates:1; rSTs:1 tree)
          • Paraeggerthella sp. (isolates:1; rSTs:2)
        • Phoenicibacter (isolates:2; rSTs:1)
          • Phoenicibacter congonensis (isolates:2; rSTs:1)
        • Raoultibacter (isolates:6; rSTs:5 tree)
          • Raoultibacter massiliensis (isolates:2; rSTs:2)
          • Raoultibacter phocaeensis (isolates:1; rSTs:1)
          • Raoultibacter timonensis (isolates:3; rSTs:2)
        • Rubneribacter (isolates:1; rSTs:1)
          • Rubneribacter badeniensis (isolates:1; rSTs:1)
        • Slackia (isolates:23; rSTs:14 tree)
          • Slackia equolifaciens (isolates:1; rSTs:1)
          • Slackia exigua (isolates:10; rSTs:5 tree)
          • Slackia faecicanis (isolates:1; rSTs:1)
          • Slackia heliotrinireducens (isolates:2; rSTs:1)
          • Slackia isoflavoniconvertens (isolates:5; rSTs:3 tree)
          • Slackia piriformis (isolates:3; rSTs:2)
          • Slackia sp. (isolates:1; rSTs:1)
        • Xiamenia (isolates:3; rSTs:2)
          • Xiamenia xianingshaonis (isolates:3; rSTs:2)
  • Nitriliruptoria (isolates:9; rSTs:7 tree)
    • Egibacterales (isolates:1; rSTs:1)
      • Egibacteraceae (isolates:1; rSTs:1)
        • Egibacter (isolates:1; rSTs:1)
          • Egibacter rhizosphaerae (isolates:1; rSTs:1)
    • Egicoccales (isolates:2; rSTs:1)
      • Egicoccaceae (isolates:2; rSTs:1)
        • Egicoccus (isolates:2; rSTs:1)
          • Egicoccus halophilus (isolates:2; rSTs:1)
    • Euzebyales (isolates:3; rSTs:3 tree)
      • Euzebyaceae (isolates:3; rSTs:3 tree)
        • Euzebya (isolates:3; rSTs:3 tree)
          • Euzebya pacifica (isolates:1; rSTs:1)
          • Euzebya rosea (isolates:1; rSTs:1)
          • Euzebya tangerina (isolates:1; rSTs:1)
    • Nitriliruptorales (isolates:2; rSTs:1)
      • Nitriliruptoraceae (isolates:2; rSTs:1)
        • Nitriliruptor (isolates:1; rSTs:1)
          • Nitriliruptor alkaliphilus (isolates:1; rSTs:1)
        • Profundirhabdus (isolates:1)
          • Profundirhabdus halotolerans (isolates:1)
    • Salsipaludibacterales (isolates:1; rSTs:1)
      • Salsipaludibacteraceae (isolates:1; rSTs:1)
        • Salsipaludibacter (isolates:1; rSTs:1)
          • Salsipaludibacter albus (isolates:1; rSTs:1)
  • Rubrobacteria (isolates:13; rSTs:10 tree)
    • Rubrobacterales (isolates:13; rSTs:10 tree)
      • Rubrobacteraceae (isolates:13; rSTs:10 tree)
        • Rubrobacter (isolates:13; rSTs:10 tree)
          • Rubrobacter aplysinae (isolates:1; rSTs:1)
          • Rubrobacter calidifluminis (isolates:1; rSTs:1)
          • Rubrobacter indicoceani (isolates:1; rSTs:1)
          • Rubrobacter marinus (isolates:1)
          • Rubrobacter naiadicus (isolates:1; rSTs:1)
          • Rubrobacter radiotolerans (isolates:3; rSTs:1)
          • Rubrobacter taiwanensis (isolates:1; rSTs:1)
          • Rubrobacter tropicus (isolates:1; rSTs:1)
          • Rubrobacter xylanophilus (isolates:3; rSTs:3 tree)
  • Thermoleophilia (isolates:34; rSTs:18 tree)
    • Gaiellales (isolates:1; rSTs:1)
      • Gaiellaceae (isolates:1; rSTs:1)
        • Gaiella (isolates:1; rSTs:1)
          • Gaiella occulta (isolates:1; rSTs:1)
    • Miltoncostaeales (isolates:2; rSTs:2)
      • Miltoncostaeaceae (isolates:2; rSTs:2)
        • Miltoncostaea (isolates:2; rSTs:2)
          • Miltoncostaea marina (isolates:1; rSTs:1)
          • Miltoncostaea oceani (isolates:1; rSTs:1)
    • Solirubrobacterales (isolates:30; rSTs:14 tree)
      • Baekduiaceae (isolates:3; rSTs:2)
        • Baekduia (isolates:2; rSTs:2)
          • Baekduia alba (isolates:1; rSTs:1)
          • Baekduia soli (isolates:1; rSTs:1)
        • Svornostia (isolates:1)
          • Svornostia abyssi (isolates:1)
      • Capillimicrobiaceae (isolates:1)
        • Capillimicrobium (isolates:1)
          • Capillimicrobium parvum (isolates:1)
      • Conexibacteraceae (isolates:8; rSTs:2)
        • Conexibacter (isolates:8; rSTs:2)
          • Conexibacter arvalis (isolates:1; rSTs:1)
          • Conexibacter sp. (isolates:4)
          • Conexibacter stalactiti (isolates:2)
          • Conexibacter woesei (isolates:1; rSTs:1)
      • Paraconexibacteraceae (isolates:3; rSTs:2)
        • Paraconexibacter (isolates:3; rSTs:2)
          • Paraconexibacter algicola (isolates:1; rSTs:1)
          • Paraconexibacter antarcticus (isolates:1)
          • Paraconexibacter sp. (isolates:1; rSTs:1)
      • Patulibacteraceae (isolates:9; rSTs:5 tree)
        • Patulibacter (isolates:9; rSTs:5 tree)
          • Patulibacter americanus (isolates:1; rSTs:1)
          • Patulibacter brassicae (isolates:1)
          • Patulibacter medicamentivorans (isolates:1; rSTs:1)
          • Patulibacter minatonensis (isolates:3; rSTs:1)
          • Patulibacter sp. (isolates:3; rSTs:2)
      • Solirubrobacteraceae (isolates:6; rSTs:3 tree)
        • Solirubrobacter (isolates:6; rSTs:3 tree)
          • Candidatus Solirubrobacter pratensis (isolates:1; rSTs:1)
          • Solirubrobacter deserti (isolates:2; rSTs:1)
          • Solirubrobacter ginsenosidimutans (isolates:1)
          • Solirubrobacter pauli (isolates:1; rSTs:1)
          • Solirubrobacter phytolaccae (isolates:1)
    • Thermoleophilales (isolates:1; rSTs:1)
      • Thermoleophilaceae (isolates:1; rSTs:1)
        • Thermoleophilum (isolates:1; rSTs:1)
          • Thermoleophilum album (isolates:1; rSTs:1)
• Aquificota (isolates:39; rSTs:29 tree)
  • Aquificia (isolates:39; rSTs:29 tree)
    • Aquificales (isolates:29; rSTs:19 tree)
      • Aquificaceae (isolates:17; rSTs:10 tree)
        • Aquifex (isolates:1; rSTs:1)
          • Aquifex aeolicus (isolates:1; rSTs:1)
        • Hydrogenivirga (isolates:2; rSTs:1)
          • Hydrogenivirga caldilitoris (isolates:1; rSTs:1)
          • Hydrogenivirga sp. (isolates:1)
        • Hydrogenobacter (isolates:5; rSTs:2)
          • Hydrogenobacter hydrogenophilus (isolates:1; rSTs:1)
          • Hydrogenobacter thermophilus (isolates:4; rSTs:1)
        • Hydrogenobaculum (isolates:5; rSTs:2)
          • Hydrogenobaculum sp. (isolates:5; rSTs:2)
        • Thermocrinis (isolates:4; rSTs:4 tree)
          • Thermocrinis albus (isolates:1; rSTs:1)
          • Thermocrinis jamiesonii (isolates:1; rSTs:1)
          • Thermocrinis minervae (isolates:1; rSTs:1)
          • Thermocrinis ruber (isolates:1; rSTs:1)
      • Hydrogenothermaceae (isolates:12; rSTs:9 tree)
        • Hydrogenothermus (isolates:1; rSTs:1)
          • Hydrogenothermus marinus (isolates:1; rSTs:1)
        • Persephonella (isolates:5; rSTs:4 tree)
          • Persephonella atlantica (isolates:1; rSTs:1)
          • Persephonella hydrogeniphila (isolates:1; rSTs:1)
          • Persephonella marina (isolates:1; rSTs:1)
          • Persephonella sp. (isolates:2; rSTs:1)
        • Sulfurihydrogenibium (isolates:4; rSTs:3 tree)
          • Sulfurihydrogenibium azorense (isolates:1; rSTs:1)
          • Sulfurihydrogenibium sp. (isolates:1; rSTs:1)
          • Sulfurihydrogenibium subterraneum (isolates:1; rSTs:1)
          • Sulfurihydrogenibium yellowstonense (isolates:1)
        • Venenivibrio (isolates:2; rSTs:1)
          • Venenivibrio stagnispumantis (isolates:2; rSTs:1)
    • Desulfurobacteriales (isolates:10; rSTs:10 tree)
      • Desulfurobacteriaceae (isolates:10; rSTs:10 tree)
        • Balnearium (isolates:1; rSTs:1)
          • Balnearium lithotrophicum (isolates:1; rSTs:1)
        • Desulfurobacterium (isolates:6; rSTs:6 tree)
          • Desulfurobacterium atlanticum (isolates:1; rSTs:1)
          • Desulfurobacterium indicum (isolates:1; rSTs:1)
          • Desulfurobacterium pacificum (isolates:1; rSTs:1)
          • Desulfurobacterium sp. (isolates:1; rSTs:1)
          • Desulfurobacterium thermolithotrophum (isolates:2; rSTs:2)
        • Phorcysia (isolates:1; rSTs:1)
          • Phorcysia thermohydrogeniphila (isolates:1; rSTs:1)
        • Thermovibrio (isolates:2; rSTs:2)
          • Thermovibrio ammonificans (isolates:1; rSTs:1)
          • Thermovibrio guaymasensis (isolates:1; rSTs:1)
• Armatimonadota (isolates:7; rSTs:6 tree)
  • Armatimonadia (isolates:2; rSTs:2)
    • Armatimonadales (isolates:1; rSTs:1)
      • Armatimonadaceae (isolates:1; rSTs:1)
        • Armatimonas (isolates:1; rSTs:1)
          • Armatimonas rosea (isolates:1; rSTs:1)
    • Capsulimonadales (isolates:1; rSTs:1)
      • Capsulimonadaceae (isolates:1; rSTs:1)
        • Capsulimonas (isolates:1; rSTs:1)
          • Capsulimonas corticalis (isolates:1; rSTs:1)
  • Chthonomonadia (isolates:4; rSTs:3 tree)
    • Chthonomonadales (isolates:4; rSTs:3 tree)
      • Chthonomonadaceae (isolates:4; rSTs:3 tree)
        • Chthonomonas (isolates:4; rSTs:3 tree)
          • Chthonomonas calidirosea (isolates:4; rSTs:3 tree)
  • Fimbriimonadia (isolates:1; rSTs:1)
    • Fimbriimonadales (isolates:1; rSTs:1)
      • Fimbriimonadaceae (isolates:1; rSTs:1)
        • Fimbriimonas (isolates:1; rSTs:1)
          • Fimbriimonas ginsengisoli (isolates:1; rSTs:1)
• Atribacterota (isolates:3; rSTs:3 tree)
  • Atribacteria (isolates:3; rSTs:3)
    • Atribacterales (isolates:3; rSTs:3)
      • Atribacteraceae (isolates:1; rSTs:1)
        • Atribacter (isolates:1; rSTs:1)
          • Atribacter laminatus (isolates:1; rSTs:1)
      • Candidatus Caldatribacteriaceae (isolates:2; rSTs:2)
        • Candidatus Caldatribacterium (isolates:2; rSTs:2)
          • Candidatus Caldatribacterium californiense (isolates:1; rSTs:1)
          • Candidatus Caldatribacterium saccharofermentans (isolates:1; rSTs:1)
• Bacillota (isolates:322580; rSTs:89252)
  • Bacilli (isolates:293240; rSTs:82753)
    • Bacillales (isolates:171629; rSTs:42547)
      • Abyssicoccaceae (isolates:1; rSTs:1)
        • Abyssicoccus (isolates:1; rSTs:1)
          • Abyssicoccus albus (isolates:1; rSTs:1)
      • Alicyclobacillaceae (isolates:70; rSTs:59 tree)
        • Alicyclobacillus (isolates:45; rSTs:40 tree)
          • Alicyclobacillus acidiphilus (isolates:2; rSTs:1)
          • Alicyclobacillus acidocaldarius (isolates:2; rSTs:1)
          • Alicyclobacillus acidoterrestris (isolates:2; rSTs:1)
          • Alicyclobacillus cellulosilyticus (isolates:2; rSTs:1)
          • Alicyclobacillus contaminans (isolates:1; rSTs:1)
          • Alicyclobacillus curvatus (isolates:1; rSTs:1)
          • Alicyclobacillus cycloheptanicus (isolates:2; rSTs:1)
          • Alicyclobacillus dauci (isolates:1; rSTs:1)
          • Alicyclobacillus fastidiosus (isolates:3; rSTs:2)
          • Alicyclobacillus ferrooxydans (isolates:1; rSTs:1)
          • Alicyclobacillus fructus (isolates:2; rSTs:1)
          • Alicyclobacillus herbarius (isolates:1; rSTs:1)
          • Alicyclobacillus hesperidum (isolates:3; rSTs:3 tree)
          • Alicyclobacillus kakegawensis (isolates:1; rSTs:1)
          • Alicyclobacillus macrosporangiidus (isolates:2; rSTs:2)
          • Alicyclobacillus mali (isolates:4; rSTs:4 tree)
          • Alicyclobacillus mengziensis (isolates:1; rSTs:1)
          • Alicyclobacillus montanus (isolates:1; rSTs:1)
          • Alicyclobacillus pomorum (isolates:1; rSTs:1)
          • Alicyclobacillus sacchari (isolates:2; rSTs:2)
          • Alicyclobacillus sendaiensis (isolates:3; rSTs:3 tree)
          • Alicyclobacillus shizuokensis (isolates:1; rSTs:1)
          • Alicyclobacillus sp. (isolates:1; rSTs:3 tree)
          • Alicyclobacillus suci (isolates:2; rSTs:2)
          • Alicyclobacillus tengchongensis (isolates:1; rSTs:1)
          • Alicyclobacillus tolerans (isolates:1; rSTs:1)
          • Alicyclobacillus vulcanalis (isolates:1; rSTs:1)
        • Collibacillus (isolates:1; rSTs:1)
          • Collibacillus ludicampi (isolates:1; rSTs:1)
        • Effusibacillus (isolates:4; rSTs:3 tree)
          • Effusibacillus dendaii (isolates:1; rSTs:1)
          • Effusibacillus lacus (isolates:2; rSTs:1)
          • Effusibacillus pohliae (isolates:1; rSTs:1)
        • Ferroacidibacillus (isolates:4; rSTs:2)
          • Ferroacidibacillus organovorans (isolates:4; rSTs:2)
        • Fodinisporobacter (isolates:1; rSTs:1)
          • Fodinisporobacter ferrooxydans (isolates:1; rSTs:1)
        • Kyrpidia (isolates:6; rSTs:4 tree)
          • Kyrpidia spormannii (isolates:5; rSTs:3 tree)
          • Kyrpidia tusciae (isolates:1; rSTs:1)
        • Sulfoacidibacillus (isolates:2; rSTs:2)
          • Sulfoacidibacillus ferrooxidans (isolates:1; rSTs:1)
          • Sulfoacidibacillus thermotolerans (isolates:1; rSTs:1)
        • Tumebacillus (isolates:7; rSTs:6 tree)
          • Tumebacillus algifaecis (isolates:1; rSTs:1)
          • Tumebacillus amylolyticus (isolates:1; rSTs:1)
          • Tumebacillus avium (isolates:1; rSTs:1)
          • Tumebacillus flagellatus (isolates:1; rSTs:1)
          • Tumebacillus lacus (isolates:1)
          • Tumebacillus permanentifrigoris (isolates:1; rSTs:1)
          • Tumebacillus sp. (isolates:1; rSTs:1)
      • Anoxybacillaceae (isolates:242; rSTs:197)
        • Anoxybacillus (isolates:61; rSTs:54)
          • Anoxybacillus amylolyticus (isolates:1; rSTs:1)
          • Anoxybacillus ayderensis (isolates:6; rSTs:6)
          • Anoxybacillus caldiproteolyticus (isolates:3; rSTs:3)
          • Anoxybacillus calidus (isolates:1; rSTs:1)
          • Anoxybacillus flavithermus (isolates:2; rSTs:2)
          • Anoxybacillus gonensis (isolates:5; rSTs:3)
          • Anoxybacillus kestanbolensis (isolates:2; rSTs:2)
          • Anoxybacillus mongoliensis (isolates:1; rSTs:1)
          • Anoxybacillus pushchinoensis (isolates:1; rSTs:1)
          • Anoxybacillus rupiensis (isolates:6; rSTs:5)
          • Anoxybacillus sp. (isolates:24; rSTs:23)
          • Anoxybacillus suryakundensis (isolates:3; rSTs:1)
          • Anoxybacillus tengchongensis (isolates:1; rSTs:1)
          • Anoxybacillus tepidamans (isolates:1; rSTs:1)
          • Anoxybacillus thermarum (isolates:1; rSTs:1)
          • Anoxybacillus vitaminiphilus (isolates:1; rSTs:1)
          • Anoxybacillus voinovskiensis (isolates:2; rSTs:1)
        • Geobacillus (isolates:137; rSTs:111)
          • Geobacillus genomosp. 3 (isolates:1; rSTs:1)
          • Geobacillus icigianus (isolates:1; rSTs:1)
          • Geobacillus jurassicus (isolates:1; rSTs:1)
          • Geobacillus kaustophilus (isolates:2; rSTs:2)
          • Geobacillus lituanicus (isolates:1; rSTs:1)
          • Geobacillus proteiniphilus (isolates:2; rSTs:2)
          • Geobacillus sp. (isolates:39; rSTs:43)
          • Geobacillus stearothermophilus (isolates:51; rSTs:29)
          • Geobacillus subterraneus (isolates:5; rSTs:4)
          • Geobacillus thermocatenulatus (isolates:3; rSTs:2)
          • Geobacillus thermodenitrificans (isolates:14; rSTs:12)
          • Geobacillus thermoleovorans (isolates:8; rSTs:6)
          • Geobacillus thermopakistaniensis (isolates:1; rSTs:1)
          • Geobacillus vulcani (isolates:1; rSTs:1)
          • Geobacillus zalihae (isolates:6; rSTs:4)
          • [Bacillus] caldolyticus (isolates:1; rSTs:1)
        • Parageobacillus (isolates:42; rSTs:30)
          • Parageobacillus caldoxylosilyticus (isolates:8; rSTs:6)
          • Parageobacillus galactosidasius (isolates:1; rSTs:1)
          • Parageobacillus genomosp. 1 (isolates:1; rSTs:1)
          • Parageobacillus sp. (isolates:3; rSTs:5)
          • Parageobacillus thermantarcticus (isolates:1; rSTs:1)
          • Parageobacillus thermoglucosidasius (isolates:20; rSTs:10)
          • Parageobacillus toebii (isolates:7; rSTs:5)
          • Parageobacillus yumthangensis (isolates:1; rSTs:1)
        • Saccharococcus (isolates:1; rSTs:1)
          • Saccharococcus thermophilus (isolates:1; rSTs:1)
        • Thermolongibacillus (isolates:1; rSTs:1)
          • Thermolongibacillus altinsuensis (isolates:1; rSTs:1)
      • Bacillaceae (isolates:10779; rSTs:6056)
        • Aciduricibacillus (isolates:1; rSTs:1)
          • Aciduricibacillus chroicocephali (isolates:1; rSTs:1)
        • Aeribacillus (isolates:20; rSTs:21 tree)
          • Aeribacillus composti (isolates:6; rSTs:4 tree)
          • Aeribacillus pallidus (isolates:3; rSTs:3 tree)
          • Aeribacillus sp. (isolates:11; rSTs:14 tree)
        • Aliibacillus (isolates:1; rSTs:1)
          • Aliibacillus thermotolerans (isolates:1; rSTs:1)
        • Alkalibacillus (isolates:9; rSTs:9 tree)
          • Alkalibacillus aidingensis (isolates:1; rSTs:1)
          • Alkalibacillus almallahensis (isolates:1; rSTs:1)
          • Alkalibacillus filiformis (isolates:1; rSTs:1)
          • Alkalibacillus flavidus (isolates:1; rSTs:1)
          • Alkalibacillus haloalkaliphilus (isolates:3; rSTs:3 tree)
          • Alkalibacillus salilacus (isolates:1; rSTs:1)
          • Alkalibacillus silvisoli (isolates:1; rSTs:1)
        • Alkalicoccobacillus (isolates:6; rSTs:5 tree)
          • Alkalicoccobacillus gibsonii (isolates:3; rSTs:2)
          • Alkalicoccobacillus murimartini (isolates:1; rSTs:1)
          • Alkalicoccobacillus plakortidis (isolates:1; rSTs:1)
          • Alkalicoccobacillus porphyridii (isolates:1; rSTs:1)
        • Alkalicoccus (isolates:6; rSTs:6 tree)
          • Alkalicoccus chagannorensis (isolates:1; rSTs:1)
          • Alkalicoccus daliensis (isolates:1; rSTs:1)
          • Alkalicoccus halolimnae (isolates:1; rSTs:1)
          • Alkalicoccus luteus (isolates:1; rSTs:1)
          • Alkalicoccus saliphilus (isolates:1; rSTs:1)
          • Alkalicoccus urumqiensis (isolates:1; rSTs:1)
        • Alkalihalobacillus (isolates:14; rSTs:9 tree)
          • Alkalihalobacillus alcalophilus (isolates:3; rSTs:1)
          • Alkalihalobacillus algicola (isolates:1; rSTs:1)
          • Alkalihalobacillus deserti (isolates:1; rSTs:1)
          • Alkalihalobacillus hemicentroti (isolates:2; rSTs:1)
          • Alkalihalobacillus macyae (isolates:2; rSTs:2)
          • Alkalihalobacillus pseudalcaliphilus (isolates:2; rSTs:1)
          • Alkalihalobacillus sp. (isolates:1; rSTs:1 tree)
          • Alkalihalobacillus trypoxylicola (isolates:2; rSTs:1)
        • Alkalihalobacterium (isolates:4; rSTs:4 tree)
          • Alkalihalobacterium alkalinitrilicum (isolates:1; rSTs:1)
          • Alkalihalobacterium bogoriense (isolates:1; rSTs:1)
          • Alkalihalobacterium chitinilyticum (isolates:1; rSTs:1)
          • Alkalihalobacterium elongatum (isolates:1; rSTs:1)
        • Alkalihalophilus (isolates:8; rSTs:7 tree)
          • Alkalihalophilus lindianensis (isolates:1; rSTs:1)
          • Alkalihalophilus marmarensis (isolates:2; rSTs:2)
          • Alkalihalophilus pseudofirmus (isolates:5; rSTs:4 tree)
        • Allobacillus (isolates:5; rSTs:4 tree)
          • Allobacillus halotolerans (isolates:2; rSTs:1)
          • Allobacillus salarius (isolates:1; rSTs:1)
          • Allobacillus saliphilus (isolates:1; rSTs:1)
          • Allobacillus sp. (isolates:1; rSTs:1)
        • Alteribacillus (isolates:5; rSTs:4 tree)
          • Alteribacillus bidgolensis (isolates:2; rSTs:1)
          • Alteribacillus iranensis (isolates:1; rSTs:1)
          • Alteribacillus persepolensis (isolates:1; rSTs:1)
          • Alteribacillus sp. (isolates:1; rSTs:1)
        • Alteribacter (isolates:6; rSTs:6 tree)
          • Alteribacter aurantiacus (isolates:1; rSTs:1)
          • Alteribacter keqinensis (isolates:1; rSTs:1)
          • Alteribacter lacisalsi (isolates:1; rSTs:1)
          • Alteribacter natronophilus (isolates:1; rSTs:1)
          • Alteribacter populi (isolates:1; rSTs:1)
          • Alteribacter salitolerans (isolates:1; rSTs:1)
        • Amphibacillus (isolates:7; rSTs:7 tree)
          • Amphibacillus cookii (isolates:1; rSTs:1)
          • Amphibacillus indicireducens (isolates:1; rSTs:1)
          • Amphibacillus jilinensis (isolates:1; rSTs:1)
          • Amphibacillus marinus (isolates:1; rSTs:1)
          • Amphibacillus sediminis (isolates:1; rSTs:1)
          • Amphibacillus sp. (isolates:1; rSTs:1)
          • Amphibacillus xylanus (isolates:1; rSTs:1)
        • Anaerobacillus (isolates:6; rSTs:6 tree)
          • Anaerobacillus alkalidiazotrophicus (isolates:1; rSTs:1)
          • Anaerobacillus alkalilacustris (isolates:1; rSTs:1)
          • Anaerobacillus alkaliphilus (isolates:1; rSTs:1)
          • Anaerobacillus arseniciselenatis (isolates:1)
          • Anaerobacillus isosaccharinicus (isolates:1; rSTs:2)
          • Anaerobacillus sp. (isolates:1; rSTs:1)
        • Aquibacillus (isolates:9; rSTs:8 tree)
          • Aquibacillus albus (isolates:1; rSTs:1)
          • Aquibacillus halophilus (isolates:1; rSTs:1)
          • Aquibacillus kalidii (isolates:1; rSTs:1)
          • Aquibacillus koreensis (isolates:2; rSTs:1)
          • Aquibacillus rhizosphaerae (isolates:1; rSTs:1)
          • Aquibacillus saliphilus (isolates:1; rSTs:1)
          • Aquibacillus salsiterrae (isolates:1; rSTs:1)
          • Aquibacillus sediminis (isolates:1; rSTs:1)
        • Aquisalibacillus (isolates:1; rSTs:1)
          • Aquisalibacillus elongatus (isolates:1; rSTs:1)
        • Aureibacillus (isolates:1; rSTs:1)
          • Aureibacillus halotolerans (isolates:1; rSTs:1)
        • Bacillus (isolates:8631; rSTs:4270)
          • Bacillus aerolatus (isolates:1; rSTs:1)
          • Bacillus albus (isolates:29; rSTs:13 tree)
          • Bacillus alkalicellulosilyticus (isolates:1; rSTs:1)
          • Bacillus alkalicola (isolates:1; rSTs:1)
          • Bacillus alkalisoli (isolates:1; rSTs:1)
          • Bacillus altitudinis (isolates:213; rSTs:164 tree)
          • Bacillus alveayuensis (isolates:1; rSTs:1)
          • Bacillus amyloliquefaciens (isolates:67; rSTs:21 tree)
          • Bacillus andreraoultii (isolates:3; rSTs:1)
          • Bacillus anthracis (isolates:807; rSTs:92 tree)
          • Bacillus aquiflavi (isolates:3; rSTs:2)
          • Bacillus arachidis (isolates:2; rSTs:2)
          • Bacillus atrophaeus (isolates:167; rSTs:73 tree)
          • Bacillus australimaris (isolates:2; rSTs:1)
          • Bacillus badius (isolates:12; rSTs:7 tree)
          • Bacillus benzoevorans (isolates:1; rSTs:1)
          • Bacillus bingmayongensis (isolates:2; rSTs:2)
          • Bacillus cabrialesii (isolates:6; rSTs:5 tree)
          • Bacillus canaveralius (isolates:3; rSTs:2)
          • Bacillus capparidis (isolates:2; rSTs:1)
          • Bacillus carboniphilus (isolates:1; rSTs:1)
          • Bacillus cereus (isolates:1079; rSTs:455 tree)
          • Bacillus changyiensis (isolates:2; rSTs:2)
          • Bacillus cihuensis (isolates:1; rSTs:1)
          • Bacillus clarus (isolates:2; rSTs:1)
          • Bacillus coahuilensis (isolates:3; rSTs:2)
          • Bacillus cytotoxicus (isolates:41; rSTs:12 tree)
          • Bacillus dakarensis (isolates:1; rSTs:1)
          • Bacillus dicomae (isolates:1; rSTs:1)
          • Bacillus ectoiniformans (isolates:1; rSTs:1)
          • Bacillus fonticola (isolates:1; rSTs:1)
          • Bacillus freudenreichii (isolates:1; rSTs:1)
          • Bacillus fungorum (isolates:2; rSTs:2)
          • Bacillus gaemokensis (isolates:2; rSTs:1)
          • Bacillus glycinifermentans (isolates:15; rSTs:9 tree)
          • Bacillus gobiensis (isolates:1; rSTs:1)
          • Bacillus haikouensis (isolates:1)
          • Bacillus halotolerans (isolates:69; rSTs:62 tree)
          • Bacillus haynesii (isolates:117; rSTs:76 tree)
          • Bacillus hominis (isolates:4; rSTs:4 tree)
          • Bacillus horti (isolates:2; rSTs:1)
          • Bacillus inaquosorum (isolates:124; rSTs:70 tree)
          • Bacillus infantis (isolates:14; rSTs:13 tree)
          • Bacillus kexueae (isolates:1; rSTs:1)
          • Bacillus kwashiorkori (isolates:1)
          • Bacillus licheniformis (isolates:368; rSTs:122 tree)
          • Bacillus litorisediminis (isolates:2; rSTs:2)
          • Bacillus luti (isolates:7; rSTs:4 tree)
          • Bacillus manliponensis (isolates:1; rSTs:1)
          • Bacillus marasmi (isolates:1; rSTs:1)
          • Bacillus marinisedimentorum (isolates:1; rSTs:1)
          • Bacillus massiliglaciei (isolates:1; rSTs:1)
          • Bacillus massiliigorillae (isolates:1; rSTs:1)
          • Bacillus massilioanorexius (isolates:1; rSTs:1)
          • Bacillus massilionigeriensis (isolates:2; rSTs:1)
          • Bacillus mediterraneensis (isolates:1; rSTs:1)
          • Bacillus mesophilus (isolates:2; rSTs:1)
          • Bacillus methanolicus (isolates:5; rSTs:4 tree)
          • Bacillus mexicanus (isolates:1; rSTs:1)
          • Bacillus mobilis (isolates:40; rSTs:22 tree)
          • Bacillus mojavensis (isolates:38; rSTs:25 tree)
          • Bacillus mycoides (isolates:164; rSTs:116 tree)
          • Bacillus nakamurai (isolates:5; rSTs:4 tree)
          • Bacillus ndiopicus (isolates:1; rSTs:1)
          • Bacillus niameyensis (isolates:1; rSTs:1)
          • Bacillus nitratireducens (isolates:16; rSTs:12 tree)
          • Bacillus norwichensis (isolates:1; rSTs:1)
          • Bacillus oleivorans (isolates:2; rSTs:1)
          • Bacillus pacificus (isolates:92; rSTs:24 tree)
          • Bacillus pakistanensis (isolates:1; rSTs:1)
          • Bacillus paralicheniformis (isolates:214; rSTs:96 tree)
          • Bacillus paramobilis (isolates:6; rSTs:6 tree)
          • Bacillus paramycoides (isolates:17; rSTs:13 tree)
          • Bacillus paranthracis (isolates:232; rSTs:87 tree)
          • Bacillus pinisoli (isolates:1; rSTs:1)
          • Bacillus proteolyticus (isolates:5; rSTs:3 tree)
          • Bacillus pseudomycoides (isolates:127; rSTs:58 tree)
          • Bacillus pumilus (isolates:247; rSTs:114 tree)
          • Bacillus renqingensis (isolates:1; rSTs:1)
          • Bacillus rhizoplanae (isolates:1; rSTs:1)
          • Bacillus rubiinfantis (isolates:2; rSTs:1)
          • Bacillus rugosus (isolates:3; rSTs:3 tree)
          • Bacillus safensis (isolates:229; rSTs:151 tree)
          • Bacillus salacetis (isolates:1; rSTs:1)
          • Bacillus salipaludis (isolates:3; rSTs:3 tree)
          • Bacillus sanguinis (isolates:1; rSTs:1)
          • Bacillus shivajii (isolates:1; rSTs:1)
          • Bacillus siamensis (isolates:21; rSTs:15 tree)
          • Bacillus sinesaloumensis (isolates:1; rSTs:1)
          • Bacillus smithii (isolates:13; rSTs:10 tree)
          • Bacillus solimangrovi (isolates:1; rSTs:1)
          • Bacillus solitudinis (isolates:1; rSTs:1)
          • Bacillus sonorensis (isolates:36; rSTs:21 tree)
          • Bacillus sp. (isolates:805; rSTs:836 tree)
          • Bacillus spizizenii (isolates:171; rSTs:78 tree)
          • Bacillus stercoris (isolates:17; rSTs:16 tree)
          • Bacillus suaedae (isolates:1; rSTs:1)
          • Bacillus suaedaesalsae (isolates:1; rSTs:1)
          • Bacillus subtilis (isolates:893; rSTs:362 tree)
          • Bacillus swezeyi (isolates:14; rSTs:8 tree)
          • Bacillus taeanensis (isolates:1; rSTs:1)
          • Bacillus tequilensis (isolates:4; rSTs:3 tree)
          • Bacillus testis (isolates:2; rSTs:1)
          • Bacillus thermotolerans (isolates:4; rSTs:3 tree)
          • Bacillus thuringiensis (isolates:534; rSTs:225 tree)
          • Bacillus tianshenii (isolates:2; rSTs:2)
          • Bacillus timonensis (isolates:2; rSTs:1)
          • Bacillus toyonensis (isolates:339; rSTs:134 tree)
          • Bacillus tropicus (isolates:56; rSTs:36 tree)
          • Bacillus tuaregi (isolates:2; rSTs:1)
          • Bacillus vallismortis (isolates:18; rSTs:14 tree)
          • Bacillus velezensis (isolates:791; rSTs:326 tree)
          • Bacillus weihaiensis (isolates:1; rSTs:1)
          • Bacillus wiedmannii (isolates:232; rSTs:159 tree)
          • Bacillus wudalianchiensis (isolates:1; rSTs:1)
          • Bacillus xiamenensis (isolates:5; rSTs:4 tree)
          • Bacillus xiapuensis (isolates:1; rSTs:1)
          • Bacillus zhangzhouensis (isolates:4; rSTs:4 tree)
        • Caldalkalibacillus (isolates:6; rSTs:6 tree)
          • Caldalkalibacillus mannanilyticus (isolates:1; rSTs:1)
          • Caldalkalibacillus salinus (isolates:1; rSTs:1)
          • Caldalkalibacillus thermarum (isolates:3; rSTs:3 tree)
          • Caldalkalibacillus uzonensis (isolates:1; rSTs:1)
        • Caldibacillus (isolates:12; rSTs:12 tree)
          • Caldibacillus debilis (isolates:4; rSTs:4 tree)
          • Caldibacillus sp. (isolates:2; rSTs:2 tree)
          • Caldibacillus thermoamylovorans (isolates:6; rSTs:6 tree)
        • Caldifermentibacillus (isolates:17; rSTs:17 tree)
          • Caldifermentibacillus hisashii (isolates:17; rSTs:17 tree)
        • Calditerricola (isolates:2; rSTs:1)
          • Calditerricola satsumensis (isolates:2; rSTs:1)
        • Calidifontibacillus (isolates:2; rSTs:2)
          • Calidifontibacillus erzurumensis (isolates:1; rSTs:1)
          • Calidifontibacillus oryziterrae (isolates:1; rSTs:1)
        • Cerasibacillus (isolates:3; rSTs:2)
          • Cerasibacillus quisquiliarum (isolates:2; rSTs:1)
          • Cerasibacillus terrae (isolates:1; rSTs:1)
        • Compostibacillus (isolates:1; rSTs:1)
          • Compostibacillus humi (isolates:1; rSTs:1)
        • Cytobacillus (isolates:94; rSTs:78 tree)
          • Cytobacillus citreus (isolates:1; rSTs:1)
          • Cytobacillus dafuensis (isolates:1; rSTs:1)
          • Cytobacillus depressus (isolates:1; rSTs:1)
          • Cytobacillus eiseniae (isolates:1; rSTs:1)
          • Cytobacillus firmus (isolates:40; rSTs:25 tree)
          • Cytobacillus gottheilii (isolates:4; rSTs:4 tree)
          • Cytobacillus horneckiae (isolates:5; rSTs:3 tree)
          • Cytobacillus kochii (isolates:7; rSTs:7 tree)
          • Cytobacillus luteolus (isolates:2; rSTs:1)
          • Cytobacillus massiliigabonensis (isolates:1; rSTs:1)
          • Cytobacillus oceanisediminis (isolates:2; rSTs:2)
          • Cytobacillus praedii (isolates:4; rSTs:4 tree)
          • Cytobacillus pseudoceanisediminis (isolates:1; rSTs:1)
          • Cytobacillus purgationiresistens (isolates:1; rSTs:1)
          • Cytobacillus solani (isolates:3; rSTs:3 tree)
          • Cytobacillus sp. (isolates:17; rSTs:20 tree)
          • Cytobacillus spongiae (isolates:1)
          • Cytobacillus stercorigallinarum (isolates:1; rSTs:1)
          • Cytobacillus suaedae (isolates:1; rSTs:1)
        • Desertibacillus (isolates:1; rSTs:1)
          • Desertibacillus haloalkaliphilus (isolates:1; rSTs:1)
        • Domibacillus (isolates:16; rSTs:14 tree)
          • Domibacillus aminovorans (isolates:2; rSTs:2)
          • Domibacillus antri (isolates:1; rSTs:1)
          • Domibacillus enclensis (isolates:3; rSTs:1)
          • Domibacillus epiphyticus (isolates:1; rSTs:1)
          • Domibacillus indicus (isolates:1; rSTs:1)
          • Domibacillus iocasae (isolates:1; rSTs:1)
          • Domibacillus mangrovi (isolates:1; rSTs:1)
          • Domibacillus robiginosus (isolates:1; rSTs:1)
          • Domibacillus sp. (isolates:4; rSTs:4 tree)
          • Domibacillus tundrae (isolates:1; rSTs:1)
        • Ectobacillus (isolates:7; rSTs:6 tree)
          • Ectobacillus antri (isolates:3; rSTs:2)
          • Ectobacillus funiculus (isolates:1; rSTs:1)
          • Ectobacillus panaciterrae (isolates:1; rSTs:1)
          • Ectobacillus ponti (isolates:1; rSTs:1)
          • Ectobacillus sp. (isolates:1; rSTs:1)
        • Edaphobacillus (isolates:1; rSTs:1)
          • Edaphobacillus lindanitolerans (isolates:1; rSTs:1)
        • Evansella (isolates:10; rSTs:7 tree)
          • Evansella caseinilytica (isolates:1; rSTs:1)
          • Evansella cellulosilytica (isolates:4; rSTs:1)
          • Evansella clarkii (isolates:2; rSTs:2)
          • Evansella sp. (isolates:1; rSTs:1)
          • Evansella tamaricis (isolates:1; rSTs:1)
          • Evansella vedderi (isolates:1; rSTs:1)
        • Falsibacillus (isolates:2; rSTs:2)
          • Falsibacillus albus (isolates:1; rSTs:1)
          • Falsibacillus pallidus (isolates:1; rSTs:1)
        • Fervidibacillus (isolates:2; rSTs:2)
          • Fervidibacillus albus (isolates:1; rSTs:1)
          • Fervidibacillus halotolerans (isolates:1; rSTs:1)
        • Fictibacillus (isolates:33; rSTs:34 tree)
          • Fictibacillus aquaticus (isolates:1; rSTs:1)
          • Fictibacillus arsenicus (isolates:2; rSTs:2)
          • Fictibacillus barbaricus (isolates:2; rSTs:1)
          • Fictibacillus enclensis (isolates:5; rSTs:4 tree)
          • Fictibacillus fluitans (isolates:1; rSTs:1)
          • Fictibacillus gelatini (isolates:1; rSTs:1)
          • Fictibacillus halophilus (isolates:2; rSTs:1)
          • Fictibacillus macauensis (isolates:1; rSTs:1)
          • Fictibacillus marinisediminis (isolates:1; rSTs:1)
          • Fictibacillus nanhaiensis (isolates:1; rSTs:1)
          • Fictibacillus norfolkensis (isolates:1; rSTs:1)
          • Fictibacillus phosphorivorans (isolates:1; rSTs:1)
          • Fictibacillus solisalsi (isolates:1; rSTs:1)
          • Fictibacillus sp. (isolates:12; rSTs:16 tree)
          • Fictibacillus terranigra (isolates:1; rSTs:1)
        • Filobacillus (isolates:1; rSTs:1)
          • Filobacillus milosensis (isolates:1; rSTs:1)
        • Fredinandcohnia (isolates:6; rSTs:7 tree)
          • Fredinandcohnia humi (isolates:1; rSTs:1)
          • Fredinandcohnia onubensis (isolates:2; rSTs:2)
          • Fredinandcohnia quinoae (isolates:1; rSTs:1)
          • Fredinandcohnia sp. (isolates:2; rSTs:3 tree)
        • Gottfriedia (isolates:15; rSTs:13 tree)
          • Gottfriedia acidiceleris (isolates:11; rSTs:9 tree)
          • Gottfriedia endophytica (isolates:1; rSTs:1)
          • Gottfriedia luciferensis (isolates:1; rSTs:1)
          • Gottfriedia solisilvae (isolates:2; rSTs:2)
        • Gracilibacillus (isolates:25; rSTs:21 tree)
          • Gracilibacillus alcaliphilus (isolates:1; rSTs:1)
          • Gracilibacillus boraciitolerans (isolates:1; rSTs:1)
          • Gracilibacillus caseinilyticus (isolates:1; rSTs:1)
          • Gracilibacillus dipsosauri (isolates:1; rSTs:1)
          • Gracilibacillus halophilus (isolates:1; rSTs:1)
          • Gracilibacillus halotolerans (isolates:2; rSTs:1)
          • Gracilibacillus kekensis (isolates:1; rSTs:1)
          • Gracilibacillus lacisalsi (isolates:1; rSTs:1)
          • Gracilibacillus massiliensis (isolates:2; rSTs:1)
          • Gracilibacillus orientalis (isolates:1; rSTs:1)
          • Gracilibacillus oryzae (isolates:1; rSTs:1)
          • Gracilibacillus salinarum (isolates:1; rSTs:1)
          • Gracilibacillus saliphilus (isolates:1; rSTs:1)
          • Gracilibacillus salitolerans (isolates:1; rSTs:1)
          • Gracilibacillus sp. (isolates:3; rSTs:3 tree)
          • Gracilibacillus suaedae (isolates:1; rSTs:1)
          • Gracilibacillus thailandensis (isolates:2; rSTs:1)
          • Gracilibacillus timonensis (isolates:2; rSTs:1)
          • Gracilibacillus ureilyticus (isolates:1; rSTs:1)
        • Halalkalibacillus (isolates:2; rSTs:2)
          • Halalkalibacillus halophilus (isolates:1; rSTs:1)
          • Halalkalibacillus sediminis (isolates:1; rSTs:1)
        • Halalkalibacter (isolates:17; rSTs:16 tree)
          • Halalkalibacter akibai (isolates:1; rSTs:1)
          • Halalkalibacter alkaliphilus (isolates:1; rSTs:1)
          • Halalkalibacter alkalisediminis (isolates:1; rSTs:1)
          • Halalkalibacter flavus (isolates:1; rSTs:1)
          • Halalkalibacter hemicellulosilyticus (isolates:1; rSTs:1)
          • Halalkalibacter kiskunsagensis (isolates:1; rSTs:1)
          • Halalkalibacter krulwichiae (isolates:2; rSTs:1)
          • Halalkalibacter lacteus (isolates:1; rSTs:1)
          • Halalkalibacter nanhaiisediminis (isolates:1; rSTs:1)
          • Halalkalibacter oceani (isolates:3; rSTs:3 tree)
          • Halalkalibacter okhensis (isolates:1; rSTs:1)
          • Halalkalibacter sp. (isolates:1; rSTs:1 tree)
          • Halalkalibacter urbisdiaboli (isolates:1; rSTs:1)
          • Halalkalibacter wakoensis (isolates:1; rSTs:1)
        • Halalkalibacterium (ex Joshi et al. 2022) (isolates:21; rSTs:12 tree)
          • Halalkalibacterium halodurans (isolates:20; rSTs:11 tree)
          • Halalkalibacterium ligniniphilum (isolates:1; rSTs:1)
        • Halobacillus (isolates:45; rSTs:40 tree)
          • Halobacillus aidingensis (isolates:1; rSTs:1)
          • Halobacillus alkaliphilus (isolates:1; rSTs:1)
          • Halobacillus amylolyticus (isolates:1; rSTs:1)
          • Halobacillus andaensis (isolates:2; rSTs:1)
          • Halobacillus campisalis (isolates:1; rSTs:1)
          • Halobacillus dabanensis (isolates:1; rSTs:1)
          • Halobacillus faecis (isolates:1; rSTs:1)
          • Halobacillus fulvus (isolates:1; rSTs:1)
          • Halobacillus halophilus (isolates:2; rSTs:1)
          • Halobacillus hunanensis (isolates:1; rSTs:1)
          • Halobacillus ihumii (isolates:1; rSTs:1)
          • Halobacillus karajensis (isolates:4; rSTs:2)
          • Halobacillus kuroshimensis (isolates:2; rSTs:2)
          • Halobacillus litoralis (isolates:2; rSTs:2)
          • Halobacillus locisalis (isolates:1; rSTs:1)
          • Halobacillus mangrovi (isolates:1; rSTs:1)
          • Halobacillus massiliensis (isolates:1; rSTs:1)
          • Halobacillus naozhouensis (isolates:1; rSTs:1)
          • Halobacillus salinarum (isolates:1; rSTs:1)
          • Halobacillus salinus (isolates:2; rSTs:2)
          • Halobacillus seohaensis (isolates:1; rSTs:1)
          • Halobacillus shinanisalinarum (isolates:1; rSTs:1)
          • Halobacillus sp. (isolates:12; rSTs:11 tree)
          • Halobacillus trueperi (isolates:1; rSTs:1)
          • Halobacillus yeomjeoni (isolates:2; rSTs:2)
        • Halolactibacillus (isolates:8; rSTs:3 tree)
          • Halolactibacillus alkaliphilus (isolates:3; rSTs:1)
          • Halolactibacillus halophilus (isolates:2; rSTs:1)
          • Halolactibacillus miurensis (isolates:2; rSTs:1)
          • Halolactibacillus sp. (isolates:1)
        • Heyndrickxia (isolates:129; rSTs:97 tree)
          • Heyndrickxia acidicola (isolates:2; rSTs:1)
          • Heyndrickxia acidiproducens (isolates:2; rSTs:1)
          • Heyndrickxia camelliae (isolates:1; rSTs:1)
          • Heyndrickxia coagulans (isolates:34; rSTs:24 tree)
          • Heyndrickxia faecalis (isolates:10; rSTs:5 tree)
          • Heyndrickxia ginsengihumi (isolates:4; rSTs:4 tree)
          • Heyndrickxia oleronia (isolates:8; rSTs:7 tree)
          • Heyndrickxia shackletonii (isolates:2; rSTs:1)
          • Heyndrickxia sp. (isolates:3; rSTs:35 tree)
          • Heyndrickxia sporothermodurans (isolates:43; rSTs:14 tree)
          • Heyndrickxia vini (isolates:1; rSTs:1)
          • Weizmannia acidilactici (isolates:3; rSTs:3 tree)
          • Weizmannia sp. (isolates:16)
        • Lederbergia (isolates:16; rSTs:14 tree)
          • Lederbergia citrea (isolates:3; rSTs:3 tree)
          • Lederbergia citri (isolates:1; rSTs:1)
          • Lederbergia citrisecunda (isolates:1; rSTs:1)
          • Lederbergia galactosidilytica (isolates:2; rSTs:2)
          • Lederbergia lenta (isolates:4; rSTs:3 tree)
          • Lederbergia panacisoli (isolates:1; rSTs:1)
          • Lederbergia ruris (isolates:1; rSTs:1)
          • Lederbergia sp. (isolates:1; rSTs:1)
          • Lederbergia wuyishanensis (isolates:2; rSTs:1)
        • Lentibacillus (isolates:14; rSTs:14 tree)
          • Lentibacillus amyloliquefaciens (isolates:1; rSTs:1)
          • Lentibacillus cibarius (isolates:2; rSTs:2)
          • Lentibacillus halodurans (isolates:1; rSTs:1)
          • Lentibacillus halophilus (isolates:1; rSTs:1)
          • Lentibacillus jeotgali (isolates:1; rSTs:1)
          • Lentibacillus juripiscarius (isolates:1; rSTs:1)
          • Lentibacillus kapialis (isolates:1; rSTs:1)
          • Lentibacillus lipolyticus (isolates:1; rSTs:1)
          • Lentibacillus persicus (isolates:1; rSTs:1)
          • Lentibacillus salicampi (isolates:1; rSTs:1)
          • Lentibacillus saliphilus (isolates:1; rSTs:1)
          • Lentibacillus sediminis (isolates:1; rSTs:1)
          • Lentibacillus sp. (isolates:1; rSTs:1)
        • Litchfieldia (isolates:2; rSTs:2)
          • Litchfieldia alkalitelluris (isolates:1; rSTs:1)
          • Litchfieldia salsa (isolates:1; rSTs:1)
        • Litoribacterium (isolates:1; rSTs:1)
          • Litoribacterium kuwaitense (isolates:1; rSTs:1)
        • Lottiidibacillus (isolates:1; rSTs:1)
          • Lottiidibacillus patelloidae (isolates:1; rSTs:1)
        • Lysinibacillus (isolates:192; rSTs:146 tree)
          • Lysinibacillus agricola (isolates:1; rSTs:1)
          • Lysinibacillus alkalisoli (isolates:1; rSTs:1)
          • Lysinibacillus boronitolerans (isolates:5; rSTs:4 tree)
          • Lysinibacillus capsici (isolates:26; rSTs:19 tree)
          • Lysinibacillus cavernae (isolates:1; rSTs:1)
          • Lysinibacillus composti (isolates:2; rSTs:1)
          • Lysinibacillus contaminans (isolates:1)
          • Lysinibacillus endophyticus (isolates:4; rSTs:4 tree)
          • Lysinibacillus fusiformis (isolates:37; rSTs:26 tree)
          • Lysinibacillus halotolerans (isolates:1; rSTs:1)
          • Lysinibacillus irui (isolates:5; rSTs:3 tree)
          • Lysinibacillus macroides (isolates:2; rSTs:1)
          • Lysinibacillus mangiferihumi (isolates:2; rSTs:1)
          • Lysinibacillus odysseyi (isolates:3; rSTs:1)
          • Lysinibacillus pakistanensis (isolates:5; rSTs:3 tree)
          • Lysinibacillus parviboronicapiens (isolates:4; rSTs:3 tree)
          • Lysinibacillus pinottii (isolates:1; rSTs:1)
          • Lysinibacillus piscis (isolates:1; rSTs:1)
          • Lysinibacillus sp. (isolates:68; rSTs:60 tree)
          • Lysinibacillus sphaericus (isolates:9; rSTs:4 tree)
          • Lysinibacillus tabacifolii (isolates:2; rSTs:1)
          • Lysinibacillus telephonicus (isolates:2; rSTs:2)
          • Lysinibacillus timonensis (isolates:1; rSTs:1)
          • Lysinibacillus varians (isolates:2; rSTs:1)
          • Lysinibacillus xylanilyticus (isolates:5; rSTs:4 tree)
          • Lysinibacillus yapensis (isolates:1; rSTs:1)
        • Mangrovibacillus (isolates:1; rSTs:1)
          • Mangrovibacillus cuniculi (isolates:1; rSTs:1)
        • Marinococcus (isolates:7; rSTs:6 tree)
          • Marinococcus halophilus (isolates:3; rSTs:2)
          • Marinococcus halotolerans (isolates:1; rSTs:1)
          • Marinococcus luteus (isolates:2; rSTs:2)
          • Marinococcus sp. (isolates:1; rSTs:1)
        • Massilibacterium (isolates:2; rSTs:1)
          • Massilibacterium senegalense (isolates:2; rSTs:1)
        • Melghiribacillus (isolates:1; rSTs:1)
          • Melghiribacillus thermohalophilus (isolates:1; rSTs:1)
        • Mesobacillus (isolates:23; rSTs:21 tree)
          • Mesobacillus boroniphilus (isolates:1; rSTs:1)
          • Mesobacillus campisalis (isolates:1; rSTs:1)
          • Mesobacillus foraminis (isolates:4; rSTs:3 tree)
          • Mesobacillus harenae (isolates:1; rSTs:1)
          • Mesobacillus jeotgali (isolates:3; rSTs:3 tree)
          • Mesobacillus maritimus (isolates:1; rSTs:1)
          • Mesobacillus persicus (isolates:1; rSTs:1)
          • Mesobacillus selenatarsenatis (isolates:1; rSTs:1)
          • Mesobacillus sp. (isolates:4; rSTs:5 tree)
          • Mesobacillus stamsii (isolates:1; rSTs:1)
          • Mesobacillus subterraneus (isolates:1; rSTs:1)
          • Mesobacillus zeae (isolates:4; rSTs:2)
        • Metabacillus (isolates:45; rSTs:45 tree)
          • Metabacillus arenae (isolates:1; rSTs:1)
          • Metabacillus bambusae (isolates:1; rSTs:1)
          • Metabacillus crassostreae (isolates:1; rSTs:1)
          • Metabacillus dongyingensis (isolates:1; rSTs:1)
          • Metabacillus endolithicus (isolates:1; rSTs:1)
          • Metabacillus fastidiosus (isolates:6; rSTs:5 tree)
          • Metabacillus flavus (isolates:1; rSTs:1)
          • Metabacillus halosaccharovorans (isolates:4; rSTs:4 tree)
          • Metabacillus idriensis (isolates:6; rSTs:5 tree)
          • Metabacillus indicus (isolates:5; rSTs:5 tree)
          • Metabacillus iocasae (isolates:1; rSTs:1)
          • Metabacillus kandeliae (isolates:1; rSTs:1)
          • Metabacillus lacus (isolates:1; rSTs:1)
          • Metabacillus litoralis (isolates:1; rSTs:1)
          • Metabacillus malikii (isolates:1; rSTs:1)
          • Metabacillus mangrovi (isolates:1; rSTs:1)
          • Metabacillus niabensis (isolates:2; rSTs:1)
          • Metabacillus rhizolycopersici (isolates:1; rSTs:1)
          • Metabacillus schmidteae (isolates:1; rSTs:1)
          • Metabacillus sediminilitoris (isolates:2; rSTs:1)
          • Metabacillus sp. (isolates:6; rSTs:10 tree)
        • Microaerobacter (isolates:1; rSTs:1)
          • Microaerobacter geothermalis (isolates:1; rSTs:1)
        • Natribacillus (isolates:1; rSTs:1)
          • Natribacillus halophilus (isolates:1; rSTs:1)
        • Natronobacillus (isolates:1; rSTs:1)
          • Natronobacillus azotifigens (isolates:1; rSTs:1)
        • Neobacillus (isolates:78; rSTs:69 tree)
          • Neobacillus bataviensis (isolates:1; rSTs:1)
          • Neobacillus citreus (isolates:1; rSTs:1)
          • Neobacillus cucumis (isolates:1; rSTs:1)
          • Neobacillus dielmonensis (isolates:1; rSTs:1)
          • Neobacillus drentensis (isolates:14; rSTs:12 tree)
          • Neobacillus endophyticus (isolates:1; rSTs:1)
          • Neobacillus fumarioli (isolates:1; rSTs:1)
          • Neobacillus ginsengisoli (isolates:1; rSTs:1)
          • Neobacillus jeddahensis (isolates:3; rSTs:1)
          • Neobacillus kokaensis (isolates:1; rSTs:1)
          • Neobacillus massiliamazoniensis (isolates:1; rSTs:1)
          • Neobacillus mesonae (isolates:4; rSTs:4 tree)
          • Neobacillus muris (isolates:1; rSTs:1)
          • Neobacillus niacini (isolates:12; rSTs:10 tree)
          • Neobacillus notoginsengisoli (isolates:1; rSTs:1)
          • Neobacillus novalis (isolates:3; rSTs:1)
          • Neobacillus piezotolerans (isolates:1; rSTs:1)
          • Neobacillus rhizophilus (isolates:1; rSTs:1)
          • Neobacillus rhizosphaerae (isolates:1; rSTs:1)
          • Neobacillus sedimentimangrovi (isolates:2; rSTs:2)
          • Neobacillus soli (isolates:2; rSTs:1)
          • Neobacillus sp. (isolates:18; rSTs:20 tree)
          • Neobacillus terrae (isolates:1; rSTs:1)
          • Neobacillus thermocopriae (isolates:3; rSTs:2)
          • Neobacillus vireti (isolates:2; rSTs:1)
        • Niallia (isolates:59; rSTs:52 tree)
          • Niallia alba (isolates:2; rSTs:2)
          • Niallia circulans (isolates:22; rSTs:15 tree)
          • Niallia endozanthoxylica (isolates:1; rSTs:1)
          • Niallia hominis (isolates:1; rSTs:1)
          • Niallia nealsonii (isolates:1; rSTs:1)
          • Niallia oryzisoli (isolates:1; rSTs:1)
          • Niallia sp. (isolates:17; rSTs:19 tree)
          • Niallia taxi (isolates:14; rSTs:12 tree)
        • Numidum (isolates:2; rSTs:1)
          • Numidum massiliense (isolates:2; rSTs:1)
        • Oceanobacillus (isolates:79; rSTs:69 tree)
          • Oceanobacillus alkalisoli (isolates:2; rSTs:2)
          • Oceanobacillus arenosus (isolates:1; rSTs:1)
          • Oceanobacillus bengalensis (isolates:1; rSTs:1)
          • Oceanobacillus caeni (isolates:5; rSTs:5 tree)
          • Oceanobacillus chungangensis (isolates:1; rSTs:1)
          • Oceanobacillus damuensis (isolates:1; rSTs:1)
          • Oceanobacillus halophilus (isolates:1; rSTs:1)
          • Oceanobacillus halotolerans (isolates:1; rSTs:1)
          • Oceanobacillus iheyensis (isolates:1; rSTs:1)
          • Oceanobacillus indicireducens (isolates:1; rSTs:1)
          • Oceanobacillus jeddahense (isolates:3; rSTs:2)
          • Oceanobacillus jordanicus (isolates:1; rSTs:1)
          • Oceanobacillus kimchii (isolates:6; rSTs:5 tree)
          • Oceanobacillus limi (isolates:1; rSTs:1)
          • Oceanobacillus luteolus (isolates:1; rSTs:1)
          • Oceanobacillus manasiensis (isolates:1; rSTs:1)
          • Oceanobacillus massiliensis (isolates:3; rSTs:2)
          • Oceanobacillus neutriphilus (isolates:2; rSTs:1)
          • Oceanobacillus oncorhynchi (isolates:7; rSTs:6 tree)
          • Oceanobacillus picturae (isolates:4; rSTs:3 tree)
          • Oceanobacillus piezotolerans (isolates:1; rSTs:1)
          • Oceanobacillus polygoni (isolates:2; rSTs:1)
          • Oceanobacillus profundus (isolates:4; rSTs:3 tree)
          • Oceanobacillus rekensis (isolates:1; rSTs:1)
          • Oceanobacillus salinisoli (isolates:1; rSTs:1)
          • Oceanobacillus saliphilus (isolates:1; rSTs:1)
          • Oceanobacillus senegalensis (isolates:1; rSTs:1)
          • Oceanobacillus sojae (isolates:1; rSTs:1)
          • Oceanobacillus sp. (isolates:21; rSTs:19 tree)
          • Oceanobacillus timonensis (isolates:1; rSTs:1)
          • Oceanobacillus zhaokaii (isolates:1; rSTs:1)
        • Oikeobacillus (isolates:1; rSTs:1)
          • Oikeobacillus pervagus (isolates:1; rSTs:1)
        • Ornithinibacillus (isolates:11; rSTs:12 tree)
          • Ornithinibacillus bavariensis (isolates:1; rSTs:1)
          • Ornithinibacillus californiensis (isolates:1; rSTs:1)
          • Ornithinibacillus caprae (isolates:1; rSTs:1)
          • Ornithinibacillus contaminans (isolates:1; rSTs:1)
          • Ornithinibacillus gellani (isolates:1; rSTs:1)
          • Ornithinibacillus halophilus (isolates:1; rSTs:1)
          • Ornithinibacillus halotolerans (isolates:1; rSTs:1)
          • Ornithinibacillus massiliensis (isolates:1; rSTs:1)
          • Ornithinibacillus scapharcae (isolates:1; rSTs:1)
          • Ornithinibacillus sp. (isolates:2; rSTs:3 tree)
        • Paenalkalicoccus (isolates:1; rSTs:1)
          • Paenalkalicoccus suaedae (isolates:1; rSTs:1)
        • Pallidibacillus (isolates:4; rSTs:4 tree)
          • Pallidibacillus pasinlerensis (isolates:1; rSTs:1)
          • Pallidibacillus thermolactis (isolates:3; rSTs:3 tree)
        • Paraliobacillus (isolates:11; rSTs:8 tree)
          • Paraliobacillus quinghaiensis (isolates:2; rSTs:1)
          • Paraliobacillus ryukyuensis (isolates:3; rSTs:2)
          • Paraliobacillus salinarum (isolates:1; rSTs:1)
          • Paraliobacillus sediminis (isolates:1)
          • Paraliobacillus sp. (isolates:2; rSTs:2)
          • Paraliobacillus zengyii (isolates:2; rSTs:2)
        • Paucisalibacillus (isolates:3; rSTs:3 tree)
          • Paucisalibacillus globulus (isolates:2; rSTs:2)
          • Paucisalibacillus sp. (isolates:1; rSTs:1)
        • Pelagirhabdus (isolates:1; rSTs:1)
          • Pelagirhabdus alkalitolerans (isolates:1; rSTs:1)
        • Peribacillus (isolates:120; rSTs:134 tree)
          • Peribacillus acanthi (isolates:1; rSTs:1)
          • Peribacillus alkalitolerans (isolates:1; rSTs:1)
          • Peribacillus asahii (isolates:5; rSTs:5 tree)
          • Peribacillus butanolivorans (isolates:7; rSTs:7 tree)
          • Peribacillus cavernae (isolates:2; rSTs:1)
          • Peribacillus deserti (isolates:2; rSTs:2)
          • Peribacillus faecalis (isolates:1; rSTs:1)
          • Peribacillus frigoritolerans (isolates:36; rSTs:54 tree)
          • Peribacillus glennii (isolates:1; rSTs:1)
          • Peribacillus huizhouensis (isolates:1; rSTs:1)
          • Peribacillus kribbensis (isolates:1; rSTs:1)
          • Peribacillus loiseleuriae (isolates:1; rSTs:1)
          • Peribacillus muralis (isolates:4; rSTs:3 tree)
          • Peribacillus psychrosaccharolyticus (isolates:4; rSTs:1)
          • Peribacillus saganii (isolates:1; rSTs:1)
          • Peribacillus simplex (isolates:26; rSTs:24 tree)
          • Peribacillus sp. (isolates:25; rSTs:28 tree)
          • Peribacillus tepidiphilus (isolates:1; rSTs:1)
        • Perspicuibacillus (isolates:1; rSTs:1)
          • Perspicuibacillus lycopersici (isolates:1; rSTs:1)
        • Piscibacillus (isolates:3; rSTs:3 tree)
          • Piscibacillus halophilus (isolates:2; rSTs:2)
          • Piscibacillus salipiscarius (isolates:1; rSTs:1)
        • Pontibacillus (isolates:14; rSTs:12 tree)
          • Pontibacillus chungwhensis (isolates:1; rSTs:1)
          • Pontibacillus halophilus (isolates:2; rSTs:1)
          • Pontibacillus litoralis (isolates:1; rSTs:1)
          • Pontibacillus marinus (isolates:2; rSTs:1)
          • Pontibacillus salipaludis (isolates:2; rSTs:2)
          • Pontibacillus sp. (isolates:3; rSTs:3 tree)
          • Pontibacillus yanchengensis (isolates:3; rSTs:3 tree)
        • Pradoshia (isolates:2; rSTs:2)
          • Pradoshia eiseniae (isolates:1; rSTs:1)
          • Pradoshia sp. (isolates:1; rSTs:1)
        • Priestia (isolates:480; rSTs:346 tree)
          • Priestia abyssalis (isolates:1; rSTs:1)
          • Priestia aryabhattai (isolates:62; rSTs:50 tree)
          • Priestia endophytica (isolates:11; rSTs:10 tree)
          • Priestia filamentosa (isolates:11; rSTs:7 tree)
          • Priestia flexa (isolates:23; rSTs:19 tree)
          • Priestia koreensis (isolates:6; rSTs:6 tree)
          • Priestia megaterium (isolates:348; rSTs:233 tree)
          • Priestia sp. (isolates:15; rSTs:18 tree)
          • Priestia taiwanensis (isolates:2; rSTs:1)
          • Priestia veravalensis (isolates:1; rSTs:1)
        • Pseudalkalibacillus (isolates:11; rSTs:14 tree)
          • Pseudalkalibacillus berkeleyi (isolates:1; rSTs:1)
          • Pseudalkalibacillus caeni (isolates:1; rSTs:1)
          • Pseudalkalibacillus decolorationis (isolates:1; rSTs:1)
          • Pseudalkalibacillus hwajinpoensis (isolates:4; rSTs:5 tree)
          • Pseudalkalibacillus salsuginis (isolates:1; rSTs:1)
          • Pseudalkalibacillus sedimenti (isolates:1; rSTs:1)
          • Pseudalkalibacillus sp. (isolates:1; rSTs:3 tree)
          • Pseudalkalibacillus spartinae (isolates:1; rSTs:1)
        • Pseudobacillus (isolates:1; rSTs:1)
          • Pseudobacillus sp. (isolates:1; rSTs:1)
        • Pseudogracilibacillus (isolates:4; rSTs:4 tree)
          • Pseudogracilibacillus auburnensis (isolates:2; rSTs:2)
          • Pseudogracilibacillus sp. (isolates:2; rSTs:2)
        • Pseudoneobacillus (isolates:1; rSTs:1)
          • Pseudoneobacillus rhizosphaerae (isolates:1; rSTs:1)
        • Psychrobacillus (isolates:37; rSTs:35 tree)
          • Psychrobacillus antarcticus (isolates:1; rSTs:1)
          • Psychrobacillus faecigallinarum (isolates:1; rSTs:1)
          • Psychrobacillus glaciei (isolates:1; rSTs:1)
          • Psychrobacillus insolitus (isolates:1; rSTs:1)
          • Psychrobacillus lasiicapitis (isolates:2; rSTs:1)
          • Psychrobacillus psychrodurans (isolates:4; rSTs:3 tree)
          • Psychrobacillus psychrotolerans (isolates:1; rSTs:1)
          • Psychrobacillus soli (isolates:1; rSTs:1)
          • Psychrobacillus sp. (isolates:24; rSTs:24 tree)
          • Psychrobacillus vulpis (isolates:1; rSTs:1)
        • Pueribacillus (isolates:1; rSTs:1)
          • Pueribacillus theae (isolates:1; rSTs:1)
        • Radiobacillus (isolates:2; rSTs:2)
          • Radiobacillus deserti (isolates:1; rSTs:1)
          • Radiobacillus kanasensis (isolates:1; rSTs:1)
        • Robertmurraya (isolates:14; rSTs:12 tree)
          • Robertmurraya andreesenii (isolates:1; rSTs:1)
          • Robertmurraya korlensis (isolates:2; rSTs:2)
          • Robertmurraya kyonggiensis (isolates:1; rSTs:1)
          • Robertmurraya massiliosenegalensis (isolates:2; rSTs:1)
          • Robertmurraya siralis (isolates:2; rSTs:2)
          • Robertmurraya sp. (isolates:3; rSTs:3 tree)
          • Robertmurraya yapensis (isolates:3; rSTs:2)
        • Rossellomorea (isolates:43; rSTs:46 tree)
          • Rossellomorea aquimaris (isolates:1; rSTs:1)
          • Rossellomorea arthrocnemi (isolates:1; rSTs:1)
          • Rossellomorea marisflavi (isolates:24; rSTs:23 tree)
          • Rossellomorea sp. (isolates:8; rSTs:13 tree)
          • Rossellomorea vietnamensis (isolates:6; rSTs:6 tree)
          • [Bacillus] enclensis (isolates:3; rSTs:2)
        • Rubeoparvulum (isolates:2; rSTs:1)
          • Rubeoparvulum massiliense (isolates:2; rSTs:1)
        • Salibacterium (isolates:5; rSTs:5 tree)
          • Salibacterium aidingense (isolates:1; rSTs:1)
          • Salibacterium halotolerans (isolates:1; rSTs:1)
          • Salibacterium qingdaonense (isolates:1; rSTs:1)
          • Salibacterium salarium (isolates:2; rSTs:2)
        • Salicibibacter (isolates:4; rSTs:4 tree)
          • Salicibibacter cibarius (isolates:1; rSTs:1)
          • Salicibibacter cibi (isolates:1; rSTs:1)
          • Salicibibacter halophilus (isolates:1; rSTs:1)
          • Salicibibacter kimchii (isolates:1; rSTs:1)
        • Salimicrobium (isolates:9; rSTs:8 tree)
          • Salimicrobium album (isolates:1; rSTs:1)
          • Salimicrobium flavidum (isolates:1; rSTs:1)
          • Salimicrobium halophilum (isolates:1; rSTs:1)
          • Salimicrobium humidisoli (isolates:1; rSTs:1)
          • Salimicrobium jeotgali (isolates:3; rSTs:1)
          • Salimicrobium salexigens (isolates:1; rSTs:1)
          • Salimicrobium sp. (isolates:1; rSTs:2)
        • Salinibacillus (isolates:3; rSTs:3 tree)
          • Salinibacillus aidingensis (isolates:1; rSTs:1)
          • Salinibacillus kushneri (isolates:1; rSTs:1)
          • Salinibacillus xinjiangensis (isolates:1; rSTs:1)
        • Salipaludibacillus (isolates:12; rSTs:9 tree)
          • Salipaludibacillus agaradhaerens (isolates:5; rSTs:3 tree)
          • Salipaludibacillus aurantiacus (isolates:1; rSTs:1)
          • Salipaludibacillus daqingensis (isolates:1; rSTs:1)
          • Salipaludibacillus keqinensis (isolates:1; rSTs:1)
          • Salipaludibacillus neizhouensis (isolates:2; rSTs:1)
          • Salipaludibacillus sp. (isolates:2; rSTs:2 tree)
        • Salirhabdus (isolates:2; rSTs:1)
          • Salirhabdus euzebyi (isolates:2; rSTs:1)
        • Salisediminibacterium (isolates:6; rSTs:4 tree)
          • Salisediminibacterium beveridgei (isolates:1; rSTs:1)
          • Salisediminibacterium haloalkalitolerans (isolates:1; rSTs:1)
          • Salisediminibacterium halotolerans (isolates:3; rSTs:1)
          • Salisediminibacterium selenitireducens (isolates:1; rSTs:1)
        • Saliterribacillus (isolates:1; rSTs:1)
          • Saliterribacillus persicus (isolates:1; rSTs:1)
        • Salsuginibacillus (isolates:2; rSTs:2)
          • Salsuginibacillus halophilus (isolates:1; rSTs:1)
          • Salsuginibacillus kocurii (isolates:1; rSTs:1)
        • Schinkia (isolates:24; rSTs:11 tree)
          • Schinkia azotoformans (isolates:24; rSTs:11 tree)
        • Sediminibacillus (isolates:5; rSTs:5 tree)
          • Sediminibacillus albus (isolates:1; rSTs:1)
          • Sediminibacillus dalangtanensis (isolates:1; rSTs:1)
          • Sediminibacillus halophilus (isolates:1; rSTs:1)
          • Sediminibacillus massiliensis (isolates:1; rSTs:1)
          • Sediminibacillus terrae (isolates:1; rSTs:1)
        • Shouchella (isolates:38; rSTs:28 tree)
          • Shouchella clausii (isolates:23; rSTs:14 tree)
          • Shouchella lehensis (isolates:3; rSTs:2)
          • Shouchella lonarensis (isolates:1; rSTs:1)
          • Shouchella miscanthi (isolates:2; rSTs:2)
          • Shouchella oshimensis (isolates:1; rSTs:1)
          • Shouchella patagoniensis (isolates:1; rSTs:1)
          • Shouchella rhizosphaerae (isolates:4; rSTs:4 tree)
          • Shouchella shacheensis (isolates:1; rSTs:1)
          • Shouchella tritolerans (isolates:1; rSTs:1)
          • Shouchella xiaoxiensis (isolates:1; rSTs:1)
        • Siminovitchia (isolates:23; rSTs:11 tree)
          • Siminovitchia acidinfaciens (isolates:1; rSTs:1)
          • Siminovitchia fordii (isolates:2; rSTs:2)
          • Siminovitchia fortis (isolates:14; rSTs:2)
          • Siminovitchia sp. (isolates:2; rSTs:2)
          • Siminovitchia terrae (isolates:3; rSTs:3 tree)
          • Siminovitchia thermophila (isolates:1; rSTs:1)
        • Streptohalobacillus (isolates:1; rSTs:1)
          • Streptohalobacillus salinus (isolates:1; rSTs:1)
        • Sutcliffiella (isolates:17; rSTs:15 tree)
          • Sutcliffiella cohnii (isolates:3; rSTs:2)
          • Sutcliffiella deserti (isolates:1)
          • Sutcliffiella halmapala (isolates:1; rSTs:1)
          • Sutcliffiella horikoshii (isolates:8; rSTs:8 tree)
          • Sutcliffiella rhizosphaerae (isolates:1; rSTs:1)
          • Sutcliffiella sp. (isolates:3; rSTs:3 tree)
        • Tenuibacillus (isolates:2; rSTs:1)
          • Tenuibacillus multivorans (isolates:2; rSTs:1)
        • Tepidibacillus (isolates:4; rSTs:3 tree)
          • Tepidibacillus decaturensis (isolates:1; rSTs:1)
          • Tepidibacillus fermentans (isolates:1; rSTs:1)
          • Tepidibacillus marianensis (isolates:1)
          • Tepidibacillus sp. (isolates:1; rSTs:1)
        • Terribacillus (isolates:17; rSTs:15 tree)
          • Terribacillus aidingensis (isolates:1; rSTs:2)
          • Terribacillus goriensis (isolates:2; rSTs:2)
          • Terribacillus halophilus (isolates:1; rSTs:1)
          • Terribacillus saccharophilus (isolates:9; rSTs:6 tree)
          • Terribacillus sp. (isolates:4; rSTs:4 tree)
        • Terrihalobacillus (isolates:2; rSTs:2)
          • Terrihalobacillus insolitus (isolates:2; rSTs:2)
        • Terrilactibacillus (isolates:3; rSTs:3 tree)
          • Terrilactibacillus laevilacticus (isolates:2; rSTs:2)
          • Terrilactibacillus tamarindi (isolates:1; rSTs:1)
        • Texcoconibacillus (isolates:1; rSTs:1)
          • Texcoconibacillus texcoconensis (isolates:1; rSTs:1)
        • Thalassobacillus (isolates:6; rSTs:4 tree)
          • Thalassobacillus cyri (isolates:1; rSTs:1)
          • Thalassobacillus devorans (isolates:4; rSTs:2)
          • Thalassobacillus pellis (isolates:1; rSTs:1)
        • Tigheibacillus (isolates:1; rSTs:2)
          • Tigheibacillus jepli (isolates:1; rSTs:2)
        • Virgibacillus (isolates:78; rSTs:56 tree)
          • Virgibacillus alimentarius (isolates:2; rSTs:2)
          • Virgibacillus chiguensis (isolates:1; rSTs:1)
          • Virgibacillus dakarensis (isolates:3; rSTs:3 tree)
          • Virgibacillus dokdonensis (isolates:3; rSTs:3 tree)
          • Virgibacillus doumboii (isolates:1; rSTs:1)
          • Virgibacillus halodenitrificans (isolates:13; rSTs:12 tree)
          • Virgibacillus halotolerans (isolates:1; rSTs:1)
          • Virgibacillus ihumii (isolates:1; rSTs:1)
          • Virgibacillus indicus (isolates:1; rSTs:1)
          • Virgibacillus litoralis (isolates:1; rSTs:1)
          • Virgibacillus massiliensis (isolates:4; rSTs:2)
          • Virgibacillus natechei (isolates:2; rSTs:1)
          • Virgibacillus ndiopensis (isolates:1; rSTs:1)
          • Virgibacillus necropolis (isolates:1; rSTs:1)
          • Virgibacillus oceani (isolates:1; rSTs:1)
          • Virgibacillus pantothenticus (isolates:23; rSTs:5 tree)
          • Virgibacillus phasianinus (isolates:1; rSTs:1)
          • Virgibacillus profundi (isolates:2; rSTs:1)
          • Virgibacillus proomii (isolates:2; rSTs:2)
          • Virgibacillus salexigens (isolates:2; rSTs:2)
          • Virgibacillus salinus (isolates:1; rSTs:1)
          • Virgibacillus senegalensis (isolates:1; rSTs:1)
          • Virgibacillus siamensis (isolates:1; rSTs:1)
          • Virgibacillus sp. (isolates:8; rSTs:9 tree)
          • Virgibacillus subterraneus (isolates:1; rSTs:1)
        • Vulcanibacillus (isolates:1; rSTs:1)
          • Vulcanibacillus modesticaldus (isolates:1; rSTs:1)
      • Bacillales Family X. Incertae Sedis (isolates:5; rSTs:4 tree)
        • Brockia (isolates:1; rSTs:1)
          • Brockia lithotrophica (isolates:1; rSTs:1)
        • Hydrogenibacillus (isolates:3; rSTs:2)
          • Hydrogenibacillus schlegelii (isolates:2; rSTs:1)
          • Hydrogenibacillus sp. (isolates:1; rSTs:1)
        • Thermicanus (isolates:1; rSTs:1)
          • Thermicanus aegyptius (isolates:1; rSTs:1)
      • Caryophanaceae (isolates:326; rSTs:288)
        • Bhargavaea (isolates:9; rSTs:9)
          • Bhargavaea beijingensis (isolates:3; rSTs:3)
          • Bhargavaea cecembensis (isolates:2; rSTs:2)
          • Bhargavaea ginsengi (isolates:2; rSTs:2)
          • Bhargavaea massiliensis (isolates:1; rSTs:1)
          • Bhargavaea sp. (isolates:1; rSTs:1)
        • Caryophanon (isolates:2; rSTs:2)
          • Caryophanon latum (isolates:1; rSTs:1)
          • Caryophanon tenue (isolates:1; rSTs:1)
        • Chryseomicrobium (isolates:1; rSTs:1)
          • Chryseomicrobium excrementi (isolates:1; rSTs:1)
        • Filibacter (isolates:1; rSTs:1)
          • Filibacter tadaridae (isolates:1; rSTs:1)
        • Indiicoccus (isolates:1; rSTs:1)
          • Indiicoccus explosivorum (isolates:1; rSTs:1)
        • Jeotgalibacillus (isolates:13; rSTs:13)
          • Jeotgalibacillus alimentarius (isolates:1; rSTs:1)
          • Jeotgalibacillus aurantiacus (isolates:1; rSTs:1)
          • Jeotgalibacillus campisalis (isolates:1; rSTs:1)
          • Jeotgalibacillus haloalkalitolerans (isolates:1; rSTs:1)
          • Jeotgalibacillus malaysiensis (isolates:1; rSTs:1)
          • Jeotgalibacillus marinus (isolates:1; rSTs:1)
          • Jeotgalibacillus proteolyticus (isolates:1; rSTs:1)
          • Jeotgalibacillus salarius (isolates:1; rSTs:1)
          • Jeotgalibacillus soli (isolates:1; rSTs:1)
          • Jeotgalibacillus sp. (isolates:3; rSTs:3)
          • Jeotgalibacillus terrae (isolates:1; rSTs:1)
        • Kurthia (isolates:26; rSTs:20)
          • Kurthia gibsonii (isolates:8; rSTs:8)
          • Kurthia huakuii (isolates:2; rSTs:1)
          • Kurthia massiliensis (isolates:2; rSTs:1)
          • Kurthia senegalensis (isolates:2; rSTs:1)
          • Kurthia sibirica (isolates:2; rSTs:1)
          • Kurthia sp. (isolates:5; rSTs:6)
          • Kurthia zopfii (isolates:5; rSTs:2)
        • Metalysinibacillus (isolates:1; rSTs:1)
          • Metalysinibacillus jejuensis (isolates:1; rSTs:1)
        • Metasolibacillus (isolates:5; rSTs:4)
          • Metasolibacillus fluoroglycofenilyticus (isolates:1; rSTs:1)
          • Metasolibacillus meyeri (isolates:2; rSTs:2)
          • Metasolibacillus sp. (isolates:2; rSTs:1)
        • Paenisporosarcina (isolates:13; rSTs:9)
          • Paenisporosarcina antarctica (isolates:1; rSTs:1)
          • Paenisporosarcina cavernae (isolates:1; rSTs:1)
          • Paenisporosarcina indica (isolates:1; rSTs:1)
          • Paenisporosarcina quisquiliarum (isolates:1; rSTs:1)
          • Paenisporosarcina sp. (isolates:9; rSTs:5)
        • Planococcus (isolates:70; rSTs:58)
          • Planococcus antarcticus (isolates:2; rSTs:2)
          • Planococcus beigongshangi (isolates:1; rSTs:1)
          • Planococcus beijingensis (isolates:1; rSTs:1)
          • Planococcus chinensis (isolates:1; rSTs:1)
          • Planococcus citreus (isolates:2; rSTs:1)
          • Planococcus donghaensis (isolates:2; rSTs:2)
          • Planococcus faecalis (isolates:2; rSTs:1)
          • Planococcus glaciei (isolates:6; rSTs:5)
          • Planococcus halocryophilus (isolates:3; rSTs:2)
          • Planococcus halotolerans (isolates:2; rSTs:2)
          • Planococcus kocurii (isolates:1; rSTs:1)
          • Planococcus koreensis (isolates:2; rSTs:1)
          • Planococcus lenghuensis (isolates:1; rSTs:1)
          • Planococcus maitriensis (isolates:1; rSTs:1)
          • Planococcus maritimus (isolates:6; rSTs:6)
          • Planococcus massiliensis (isolates:2; rSTs:1)
          • Planococcus plakortidis (isolates:1; rSTs:1)
          • Planococcus rifietoensis (isolates:1; rSTs:1)
          • Planococcus salinarum (isolates:2; rSTs:1)
          • Planococcus salinus (isolates:1; rSTs:1)
          • Planococcus soli (isolates:2; rSTs:1)
          • Planococcus sp. (isolates:26; rSTs:22)
          • Planococcus versutus (isolates:1; rSTs:1)
          • Planococcus wigleyi (isolates:1; rSTs:1)
        • Planomicrobium (isolates:8; rSTs:8)
          • Planomicrobium okeanokoites (isolates:4; rSTs:4)
          • Planomicrobium soli (isolates:1; rSTs:1)
          • Planomicrobium sp. (isolates:3; rSTs:3)
        • Rummeliibacillus (isolates:12; rSTs:11)
          • Rummeliibacillus pycnus (isolates:1; rSTs:1)
          • Rummeliibacillus sp. (isolates:5; rSTs:5)
          • Rummeliibacillus stabekisii (isolates:4; rSTs:3)
          • Rummeliibacillus suwonensis (isolates:2; rSTs:2)
        • Savagea (isolates:1; rSTs:1)
          • Savagea serpentis (isolates:1; rSTs:1)
        • Solibacillus (isolates:30; rSTs:29)
          • Solibacillus cecembensis (isolates:1; rSTs:1)
          • Solibacillus daqui (isolates:1; rSTs:1)
          • Solibacillus faecavium (isolates:1; rSTs:1)
          • Solibacillus isronensis (isolates:2; rSTs:2)
          • Solibacillus kalamii (isolates:2; rSTs:1)
          • Solibacillus merdavium (isolates:1; rSTs:1)
          • Solibacillus palustris (isolates:1; rSTs:1)
          • Solibacillus silvestris (isolates:1; rSTs:1)
          • Solibacillus sp. (isolates:20; rSTs:20)
        • Sporosarcina (isolates:90; rSTs:84)
          • Sporosarcina aquimarina (isolates:1; rSTs:1)
          • Sporosarcina beigongshangi (isolates:1; rSTs:1)
          • Sporosarcina cascadiensis (isolates:1; rSTs:1)
          • Sporosarcina cyprini (isolates:1; rSTs:1)
          • Sporosarcina gallistercoris (isolates:1; rSTs:1)
          • Sporosarcina highlanderae (isolates:1; rSTs:1)
          • Sporosarcina jeotgali (isolates:1; rSTs:1)
          • Sporosarcina jiandibaonis (isolates:1; rSTs:1)
          • Sporosarcina koreensis (isolates:1; rSTs:1)
          • Sporosarcina limicola (isolates:1; rSTs:1)
          • Sporosarcina luteola (isolates:1; rSTs:1)
          • Sporosarcina newyorkensis (isolates:1; rSTs:1)
          • Sporosarcina obsidiansis (isolates:1; rSTs:1)
          • Sporosarcina oncorhynchi (isolates:1; rSTs:1)
          • Sporosarcina pasteurii (isolates:3; rSTs:1)
          • Sporosarcina psychrophila (isolates:3; rSTs:3)
          • Sporosarcina quadrami (isolates:1; rSTs:1)
          • Sporosarcina saromensis (isolates:1; rSTs:1)
          • Sporosarcina sp. (isolates:59; rSTs:56)
          • Sporosarcina thermotolerans (isolates:2; rSTs:2)
          • Sporosarcina trichiuri (isolates:1; rSTs:1)
          • Sporosarcina ureae (isolates:5; rSTs:4)
          • Sporosarcina ureilytica (isolates:1; rSTs:1)
        • Tetzosporium (isolates:1; rSTs:1)
          • Tetzosporium hominis (isolates:1; rSTs:1)
        • Ureibacillus (isolates:29; rSTs:24)
          • Ureibacillus acetophenoni (isolates:1; rSTs:1)
          • Ureibacillus aquaedulcis (isolates:1; rSTs:1)
          • Ureibacillus chungkukjangi (isolates:3; rSTs:2)
          • Ureibacillus galli (isolates:1; rSTs:1)
          • Ureibacillus manganicus (isolates:2; rSTs:1)
          • Ureibacillus massiliensis (isolates:2; rSTs:1)
          • Ureibacillus sinduriensis (isolates:2; rSTs:1)
          • Ureibacillus sp. (isolates:7; rSTs:7)
          • Ureibacillus terrenus (isolates:3; rSTs:3)
          • Ureibacillus thermophilus (isolates:1; rSTs:1)
          • Ureibacillus thermosphaericus (isolates:5; rSTs:4)
          • Ureibacillus xyleni (isolates:1; rSTs:1)
        • Viridibacillus (isolates:13; rSTs:11)
          • Viridibacillus arenosi (isolates:2; rSTs:1)
          • Viridibacillus arvi (isolates:1; rSTs:1)
          • Viridibacillus soli (isolates:1; rSTs:1)
          • Viridibacillus sp. (isolates:9; rSTs:8)
      • Gemellaceae (isolates:31; rSTs:21 tree)
        • Gemella (isolates:29; rSTs:19 tree)
          • Gemella bergeri (isolates:1; rSTs:1)
          • Gemella cuniculi (isolates:1; rSTs:1)
          • Gemella haemolysans (isolates:9; rSTs:6 tree)
          • Gemella massiliensis (isolates:1; rSTs:1)
          • Gemella morbillorum (isolates:9; rSTs:4 tree)
          • Gemella sanguinis (isolates:6; rSTs:4 tree)
          • Gemella sp. (isolates:2; rSTs:2 tree)
        • Gemelliphila (isolates:2; rSTs:2)
          • Gemelliphila asaccharolytica (isolates:1; rSTs:1)
          • Gemelliphila palaticanis (isolates:1; rSTs:1)
      • Listeriaceae (isolates:54657; rSTs:5383)
        • Brochothrix (isolates:29; rSTs:22 tree)
          • Brochothrix campestris (isolates:1; rSTs:1)
          • Brochothrix thermosphacta (isolates:28; rSTs:21 tree)
        • Listeria (isolates:54628; rSTs:5361)
          • Listeria aquatica (isolates:3; rSTs:3 tree)
          • Listeria booriae (isolates:89; rSTs:85 tree)
          • Listeria cornellensis (isolates:1; rSTs:1)
          • Listeria cossartiae (isolates:35; rSTs:16 tree)
          • Listeria costaricensis (isolates:1; rSTs:1)
          • Listeria farberi (isolates:5; rSTs:3 tree)
          • Listeria fleischmannii (isolates:9; rSTs:6 tree)
          • Listeria floridensis (isolates:1; rSTs:1)
          • Listeria goaensis (isolates:2; rSTs:2)
          • Listeria grandensis (isolates:4; rSTs:4 tree)
          • Listeria grayi (isolates:6; rSTs:5 tree)
          • Listeria ilorinensis (isolates:1; rSTs:1)
          • Listeria immobilis (isolates:9; rSTs:6 tree)
          • Listeria innocua (isolates:1228; rSTs:259 tree)
          • Listeria ivanovii (isolates:49; rSTs:20 tree)
          • Listeria kieliensis (isolates:1; rSTs:1)
          • Listeria marthii (isolates:36; rSTs:34 tree)
          • Listeria monocytogenes (isolates:52661; rSTs:4571)
          • Listeria newyorkensis (isolates:7; rSTs:5 tree)
          • Listeria portnoyi (isolates:1; rSTs:1)
          • Listeria riparia (isolates:1; rSTs:1)
          • Listeria rocourtiae (isolates:4; rSTs:4 tree)
          • Listeria rustica (isolates:1; rSTs:1)
          • Listeria seeligeri (isolates:250; rSTs:138 tree)
          • Listeria sp. (isolates:9; rSTs:5 tree)
          • Listeria swaminathanii (isolates:13; rSTs:2)
          • Listeria thailandensis (isolates:1; rSTs:1)
          • Listeria valentina (isolates:1; rSTs:1)
          • Listeria weihenstephanensis (isolates:3; rSTs:2)
          • Listeria welshimeri (isolates:196; rSTs:181 tree)
      • Paenibacillaceae (isolates:1597; rSTs:1270 tree)
        • Ammoniphilus (isolates:2; rSTs:2)
          • Ammoniphilus oxalaticus (isolates:1; rSTs:1)
          • Ammoniphilus resinae (isolates:1; rSTs:1)
        • Aneurinibacillus (isolates:36; rSTs:20 tree)
          • Aneurinibacillus aneurinilyticus (isolates:8; rSTs:3 tree)
          • Aneurinibacillus danicus (isolates:1; rSTs:1)
          • Aneurinibacillus migulanus (isolates:12; rSTs:4 tree)
          • Aneurinibacillus soli (isolates:2; rSTs:1)
          • Aneurinibacillus sp. (isolates:1; rSTs:1)
          • Aneurinibacillus terranovensis (isolates:1; rSTs:1)
          • Aneurinibacillus thermoaerophilus (isolates:9; rSTs:7 tree)
          • Aneurinibacillus tyrosinisolvens (isolates:1; rSTs:1)
          • Aneurinibacillus uraniidurans (isolates:1; rSTs:1)
        • Brevibacillus (isolates:185; rSTs:151 tree)
          • Brevibacillus agri (isolates:20; rSTs:10 tree)
          • Brevibacillus antibioticus (isolates:1; rSTs:1)
          • Brevibacillus aydinogluensis (isolates:2; rSTs:2)
          • Brevibacillus borstelensis (isolates:19; rSTs:16 tree)
          • Brevibacillus brevis (isolates:4; rSTs:1)
          • Brevibacillus centrosporus (isolates:6; rSTs:4 tree)
          • Brevibacillus choshinensis (isolates:4; rSTs:4 tree)
          • Brevibacillus composti (isolates:2; rSTs:1)
          • Brevibacillus daliensis (isolates:1; rSTs:1)
          • Brevibacillus dissolubilis (isolates:1; rSTs:1)
          • Brevibacillus fluminis (isolates:1; rSTs:1)
          • Brevibacillus formosus (isolates:10; rSTs:5 tree)
          • Brevibacillus fortis (isolates:2; rSTs:2)
          • Brevibacillus fulvus (isolates:2; rSTs:1)
          • Brevibacillus gelatini (isolates:1; rSTs:1)
          • Brevibacillus halotolerans (isolates:4; rSTs:4 tree)
          • Brevibacillus humidisoli (isolates:1; rSTs:1)
          • Brevibacillus invocatus (isolates:3; rSTs:2)
          • Brevibacillus laterosporus (isolates:33; rSTs:18 tree)
          • Brevibacillus marinus (isolates:1; rSTs:1)
          • Brevibacillus massiliensis (isolates:2; rSTs:1)
          • Brevibacillus migulae (isolates:1; rSTs:1)
          • Brevibacillus nitrificans (isolates:3; rSTs:3 tree)
          • Brevibacillus panacihumi (isolates:2; rSTs:2)
          • Brevibacillus parabrevis (isolates:9; rSTs:8 tree)
          • Brevibacillus porteri (isolates:6; rSTs:1)
          • Brevibacillus reuszeri (isolates:5; rSTs:3 tree)
          • Brevibacillus ruminantium (isolates:1; rSTs:1)
          • Brevibacillus sp. (isolates:35; rSTs:51 tree)
          • Brevibacillus thermoruber (isolates:3; rSTs:3 tree)
        • Candidatus Pristimantibacillus (isolates:1; rSTs:1)
          • Candidatus Pristimantibacillus lignocellulolyticus (isolates:1; rSTs:1)
        • Chengkuizengella (isolates:4; rSTs:4 tree)
          • Chengkuizengella marina (isolates:1; rSTs:1)
          • Chengkuizengella sediminis (isolates:1; rSTs:1)
          • Chengkuizengella sp. (isolates:2; rSTs:2)
        • Cohnella (isolates:47; rSTs:40 tree)
          • Cohnella abietis (isolates:1; rSTs:1)
          • Cohnella algarum (isolates:1; rSTs:1)
          • Cohnella boryungensis (isolates:1; rSTs:1)
          • Cohnella caldifontis (isolates:1; rSTs:1)
          • Cohnella candidum (isolates:1; rSTs:1)
          • Cohnella cholangitidis (isolates:1; rSTs:1)
          • Cohnella endophytica (isolates:1; rSTs:1)
          • Cohnella faecalis (isolates:1)
          • Cohnella fermenti (isolates:1; rSTs:1)
          • Cohnella ginsengisoli (isolates:1; rSTs:1)
          • Cohnella hashimotonis (isolates:1; rSTs:1)
          • Cohnella herbarum (isolates:1; rSTs:1)
          • Cohnella kolymensis (isolates:1; rSTs:1)
          • Cohnella laeviribosi (isolates:1; rSTs:1)
          • Cohnella lubricantis (isolates:2; rSTs:1)
          • Cohnella luojiensis (isolates:1; rSTs:1)
          • Cohnella lupini (isolates:1; rSTs:1)
          • Cohnella massiliensis (isolates:1; rSTs:1)
          • Cohnella mopanensis (isolates:1; rSTs:1)
          • Cohnella nanjingensis (isolates:1; rSTs:1)
          • Cohnella panacarvi (isolates:1; rSTs:1)
          • Cohnella phaseoli (isolates:1; rSTs:1)
          • Cohnella pontilimi (isolates:1; rSTs:1)
          • Cohnella rhizosphaerae (isolates:1; rSTs:1)
          • Cohnella silvisoli (isolates:2; rSTs:1)
          • Cohnella sp. (isolates:12; rSTs:9 tree)
          • Cohnella suwonensis (isolates:1; rSTs:1)
          • Cohnella terricola (isolates:1; rSTs:1)
          • Cohnella thailandensis (isolates:2; rSTs:1)
          • Cohnella thermotolerans (isolates:1; rSTs:1)
          • Cohnella xylanilytica (isolates:2; rSTs:2)
          • Cohnella zeiphila (isolates:1; rSTs:1)
        • Fontibacillus (isolates:3; rSTs:3 tree)
          • Fontibacillus panacisegetis (isolates:1; rSTs:1)
          • Fontibacillus phaseoli (isolates:1; rSTs:1)
          • Fontibacillus solani (isolates:1; rSTs:1)
        • Gordonibacillus (isolates:1)
          • Gordonibacillus kamchatkensis (isolates:1)
        • Gorillibacterium (isolates:4; rSTs:3 tree)
          • Gorillibacterium massiliense (isolates:1; rSTs:1)
          • Gorillibacterium sp. (isolates:1; rSTs:1)
          • Gorillibacterium timonense (isolates:2; rSTs:1)
        • Insulibacter (isolates:1; rSTs:1)
          • Insulibacter thermoxylanivorax (isolates:1; rSTs:1)
        • Longirhabdus (isolates:1; rSTs:1)
          • Longirhabdus pacifica (isolates:1; rSTs:1)
        • Paenibacillus (isolates:1293; rSTs:1029 tree)
          • Paenibacillus abyssi (isolates:1; rSTs:1)
          • Paenibacillus aceris (isolates:2; rSTs:1)
          • Paenibacillus aceti (isolates:2; rSTs:2)
          • Paenibacillus aestuarii (isolates:1; rSTs:1)
          • Paenibacillus agaridevorans (isolates:2; rSTs:2)
          • Paenibacillus agilis (isolates:1; rSTs:1)
          • Paenibacillus agri (isolates:1; rSTs:1)
          • Paenibacillus agricola (isolates:1; rSTs:1)
          • Paenibacillus alba (isolates:2; rSTs:2)
          • Paenibacillus albicereus (isolates:1; rSTs:1)
          • Paenibacillus albidus (isolates:2; rSTs:1)
          • Paenibacillus albiflavus (isolates:1; rSTs:1)
          • Paenibacillus albilobatus (isolates:1; rSTs:1)
          • Paenibacillus albus (isolates:1; rSTs:1)
          • Paenibacillus algicola (isolates:1; rSTs:1)
          • Paenibacillus alginolyticus (isolates:5; rSTs:2)
          • Paenibacillus algorifonticola (isolates:2; rSTs:1)
          • Paenibacillus alkaliterrae (isolates:1; rSTs:1)
          • Paenibacillus alkalitolerans (isolates:1; rSTs:1)
          • Paenibacillus allorhizoplanae (isolates:1; rSTs:1)
          • Paenibacillus allorhizosphaerae (isolates:1; rSTs:1)
          • Paenibacillus alvei (isolates:22; rSTs:15 tree)
          • Paenibacillus amylolyticus (isolates:13; rSTs:13 tree)
          • Paenibacillus anaericanus (isolates:2; rSTs:2)
          • Paenibacillus andongensis (isolates:1; rSTs:1)
          • Paenibacillus anseongense (isolates:2; rSTs:1)
          • Paenibacillus antarcticus (isolates:2; rSTs:1)
          • Paenibacillus antibioticophila (isolates:3; rSTs:2)
          • Paenibacillus antri (isolates:1)
          • Paenibacillus apiarius (isolates:11; rSTs:2)
          • Paenibacillus apii (isolates:2; rSTs:2)
          • Paenibacillus apis (isolates:1; rSTs:1)
          • Paenibacillus aquistagni (isolates:3; rSTs:3 tree)
          • Paenibacillus arenilitoris (isolates:1; rSTs:1)
          • Paenibacillus arenosi (isolates:1; rSTs:1)
          • Paenibacillus artemisiicola (isolates:1; rSTs:1)
          • Paenibacillus assamensis (isolates:1; rSTs:1)
          • Paenibacillus athensensis (isolates:1; rSTs:1)
          • Paenibacillus auburnensis (isolates:1; rSTs:1)
          • Paenibacillus azoreducens (isolates:2; rSTs:1)
          • Paenibacillus azotifigens (isolates:1; rSTs:1)
          • Paenibacillus baekrokdamisoli (isolates:2; rSTs:1)
          • Paenibacillus baimaensis (isolates:1)
          • Paenibacillus barcinonensis (isolates:2; rSTs:1)
          • Paenibacillus barengoltzii (isolates:6; rSTs:6 tree)
          • Paenibacillus beijingensis (isolates:1; rSTs:1)
          • Paenibacillus borealis (isolates:1; rSTs:1)
          • Paenibacillus bouchesdurhonensis (isolates:1; rSTs:1)
          • Paenibacillus bovis (isolates:1; rSTs:1)
          • Paenibacillus brasilensis (isolates:2; rSTs:1)
          • Paenibacillus brevis (isolates:1; rSTs:1)
          • Paenibacillus camelliae (isolates:1; rSTs:1)
          • Paenibacillus camerounensis (isolates:1; rSTs:1)
          • Paenibacillus campinasensis (isolates:2; rSTs:2)
          • Paenibacillus caseinilyticus (isolates:1; rSTs:1)
          • Paenibacillus castaneae (isolates:2; rSTs:1)
          • Paenibacillus catalpae (isolates:1; rSTs:1)
          • Paenibacillus caui (isolates:1; rSTs:1)
          • Paenibacillus cellulosilyticus (isolates:2; rSTs:1)
          • Paenibacillus cellulositrophicus (isolates:1; rSTs:1)
          • Paenibacillus chibensis (isolates:2; rSTs:2)
          • Paenibacillus chitinolyticus (isolates:7; rSTs:4 tree)
          • Paenibacillus chondroitinus (isolates:2; rSTs:1)
          • Paenibacillus cineris (isolates:1; rSTs:1)
          • Paenibacillus cisolokensis (isolates:1; rSTs:1)
          • Paenibacillus contaminans (isolates:1; rSTs:1)
          • Paenibacillus cookii (isolates:1; rSTs:1)
          • Paenibacillus crassostreae (isolates:2; rSTs:2)
          • Paenibacillus cremeus (isolates:1; rSTs:1)
          • Paenibacillus cucumis (ex Kampfer et al. 2016) (isolates:1; rSTs:1)
          • Paenibacillus curdlanolyticus (isolates:1; rSTs:1)
          • Paenibacillus cymbidii (isolates:1; rSTs:1)
          • Paenibacillus daejeonensis (isolates:1; rSTs:1)
          • Paenibacillus dakarensis (isolates:1; rSTs:1)
          • Paenibacillus darwinianus (isolates:3; rSTs:1)
          • Paenibacillus dauci (isolates:1; rSTs:1)
          • Paenibacillus dendritiformis (isolates:5; rSTs:5 tree)
          • Paenibacillus dendrobii (isolates:1; rSTs:1)
          • Paenibacillus dokdonensis (isolates:2; rSTs:2)
          • Paenibacillus donghaensis (isolates:1; rSTs:1)
          • Paenibacillus doosanensis (isolates:1; rSTs:1)
          • Paenibacillus durus (isolates:3; rSTs:2)
          • Paenibacillus ehimensis (isolates:4; rSTs:4 tree)
          • Paenibacillus elgii (isolates:8; rSTs:6 tree)
          • Paenibacillus endophyticus (isolates:1; rSTs:1)
          • Paenibacillus endoradicis (isolates:1; rSTs:1)
          • Paenibacillus etheri (isolates:1; rSTs:1)
          • Paenibacillus eucommiae (isolates:1; rSTs:1)
          • Paenibacillus faecalis (isolates:1; rSTs:1)
          • Paenibacillus faecis (isolates:2; rSTs:2)
          • Paenibacillus farraposensis (isolates:1; rSTs:1)
          • Paenibacillus favisporus (isolates:1; rSTs:1)
          • Paenibacillus ferrarius (isolates:1; rSTs:1)
          • Paenibacillus filicis (isolates:1; rSTs:1)
          • Paenibacillus flagellatus (isolates:1; rSTs:1)
          • Paenibacillus foliorum (isolates:1; rSTs:1)
          • Paenibacillus fonticola (isolates:1; rSTs:1)
          • Paenibacillus forsythiae (isolates:2; rSTs:1)
          • Paenibacillus frigoriresistens (isolates:1; rSTs:1)
          • Paenibacillus gallinarum (isolates:1; rSTs:1)
          • Paenibacillus germinis (isolates:1; rSTs:1)
          • Paenibacillus ginsengarvi (isolates:1; rSTs:1)
          • Paenibacillus ginsengihumi (isolates:1; rSTs:1)
          • Paenibacillus glacialis (isolates:1; rSTs:1)
          • Paenibacillus glucanolyticus (isolates:4; rSTs:3 tree)
          • Paenibacillus glufosinatiresistens (isolates:1; rSTs:1)
          • Paenibacillus glycanilyticus (isolates:3; rSTs:3 tree)
          • Paenibacillus glycinis (isolates:1; rSTs:1)
          • Paenibacillus gorillae (isolates:1; rSTs:1)
          • Paenibacillus graminis (isolates:4; rSTs:2)
          • Paenibacillus guangzhouensis (isolates:1; rSTs:1)
          • Paenibacillus hamazuiensis (isolates:1; rSTs:1)
          • Paenibacillus harenae (isolates:1; rSTs:1)
          • Paenibacillus helianthi (isolates:1; rSTs:1)
          • Paenibacillus hemerocallicola (isolates:1; rSTs:1)
          • Paenibacillus herberti (isolates:1; rSTs:1)
          • Paenibacillus hexagrammi (isolates:1; rSTs:1)
          • Paenibacillus hodogayensis (isolates:1; rSTs:1)
          • Paenibacillus humicola (isolates:1; rSTs:1)
          • Paenibacillus humicus (isolates:1; rSTs:1)
          • Paenibacillus hunanensis (isolates:4; rSTs:3 tree)
          • Paenibacillus ihbetae (isolates:2; rSTs:2)
          • Paenibacillus ihuae (isolates:2; rSTs:1)
          • Paenibacillus ihumii (isolates:2; rSTs:1)
          • Paenibacillus illinoisensis (isolates:8; rSTs:7 tree)
          • Paenibacillus jamilae (isolates:1; rSTs:1)
          • Paenibacillus jilunlii (isolates:3; rSTs:1)
          • Paenibacillus kobensis (isolates:1; rSTs:1)
          • Paenibacillus koleovorans (isolates:1; rSTs:1)
          • Paenibacillus konkukensis (isolates:1; rSTs:1)
          • Paenibacillus kribbensis (isolates:4; rSTs:4 tree)
          • Paenibacillus kyungheensis (isolates:1; rSTs:1)
          • Paenibacillus lacisoli (isolates:1; rSTs:1)
          • Paenibacillus lactis (isolates:3; rSTs:4 tree)
          • Paenibacillus larvae (isolates:115; rSTs:40 tree)
          • Paenibacillus lautus (isolates:14; rSTs:13 tree)
          • Paenibacillus lemnae (isolates:1; rSTs:1)
          • Paenibacillus lentus (isolates:1; rSTs:1)
          • Paenibacillus lignilyticus (isolates:1; rSTs:1)
          • Paenibacillus lupini (isolates:1; rSTs:1)
          • Paenibacillus luteus (isolates:1; rSTs:1)
          • Paenibacillus lutimineralis (isolates:2; rSTs:1)
          • Paenibacillus lutrae (isolates:1; rSTs:1)
          • Paenibacillus lycopersici (isolates:1; rSTs:1)
          • Paenibacillus macerans (isolates:14; rSTs:8 tree)
          • Paenibacillus macquariensis (isolates:4; rSTs:2)
          • Paenibacillus mangrovi (isolates:1; rSTs:1)
          • Paenibacillus marchantiae (isolates:1; rSTs:1)
          • Paenibacillus marchantiophytorum (isolates:1; rSTs:1)
          • Paenibacillus massiliensis (isolates:3; rSTs:3 tree)
          • Paenibacillus maysiensis (isolates:1; rSTs:1)
          • Paenibacillus melissococcoides (isolates:2; rSTs:1)
          • Paenibacillus mellifer (isolates:1; rSTs:1)
          • Paenibacillus mendelii (isolates:2; rSTs:1)
          • Paenibacillus mesophilus (isolates:1; rSTs:1)
          • Paenibacillus methanolicus (isolates:1; rSTs:1)
          • Paenibacillus montanisoli (isolates:1; rSTs:1)
          • Paenibacillus montaniterrae (isolates:1; rSTs:1)
          • Paenibacillus monticola (isolates:1; rSTs:1)
          • Paenibacillus motobuensis (isolates:1; rSTs:1)
          • Paenibacillus mucilaginosus (isolates:6; rSTs:4 tree)
          • Paenibacillus nanensis (isolates:1; rSTs:1)
          • Paenibacillus naphthalenovorans (isolates:3; rSTs:3 tree)
          • Paenibacillus nasutitermitis (isolates:1; rSTs:1)
          • Paenibacillus nicotianae (isolates:1; rSTs:1)
          • Paenibacillus nuruki (isolates:2; rSTs:2)
          • Paenibacillus oceani (isolates:1; rSTs:1)
          • Paenibacillus odorifer (isolates:34; rSTs:31 tree)
          • Paenibacillus oenotherae (isolates:1; rSTs:1)
          • Paenibacillus oleatilyticus (isolates:1; rSTs:1)
          • Paenibacillus oralis (isolates:1; rSTs:1)
          • Paenibacillus oryzae (isolates:1; rSTs:1)
          • Paenibacillus oryzisoli (isolates:1; rSTs:1)
          • Paenibacillus ottowii (isolates:3; rSTs:3 tree)
          • Paenibacillus pabuli (isolates:2; rSTs:1)
          • Paenibacillus paeoniae (isolates:1; rSTs:1)
          • Paenibacillus paridis (isolates:1)
          • Paenibacillus pasadenensis (isolates:3; rSTs:2)
          • Paenibacillus pectinilyticus (isolates:1; rSTs:1)
          • Paenibacillus peoriae (isolates:2; rSTs:1)
          • Paenibacillus periandrae (isolates:1; rSTs:1)
          • Paenibacillus phocaensis (isolates:2; rSTs:1)
          • Paenibacillus phoenicis (isolates:1; rSTs:1)
          • Paenibacillus phyllosphaerae (isolates:2; rSTs:1)
          • Paenibacillus physcomitrellae (isolates:2; rSTs:1)
          • Paenibacillus phytohabitans (isolates:2; rSTs:2)
          • Paenibacillus phytorum (isolates:1; rSTs:1)
          • Paenibacillus pini (isolates:2; rSTs:1)
          • Paenibacillus pinihumi (isolates:1; rSTs:1)
          • Paenibacillus pinisoli (isolates:1; rSTs:1)
          • Paenibacillus pinistramenti (isolates:1; rSTs:1)
          • Paenibacillus piri (isolates:1; rSTs:1)
          • Paenibacillus piscarius (isolates:1; rSTs:1)
          • Paenibacillus plantarum (isolates:1; rSTs:1)
          • Paenibacillus planticolens (isolates:1; rSTs:1)
          • Paenibacillus plantiphilus (isolates:1; rSTs:1)
          • Paenibacillus polygoni (isolates:1; rSTs:1)
          • Paenibacillus polymyxa (isolates:100; rSTs:68 tree)
          • Paenibacillus polysaccharolyticus (isolates:2; rSTs:2)
          • Paenibacillus popilliae (isolates:1; rSTs:1)
          • Paenibacillus profundus (isolates:1; rSTs:1)
          • Paenibacillus prosopidis (isolates:1; rSTs:1)
          • Paenibacillus protaetiae (isolates:1; rSTs:1)
          • Paenibacillus pseudetheri (isolates:1; rSTs:1)
          • Paenibacillus psychroresistens (isolates:1; rSTs:1)
          • Paenibacillus puerhi (isolates:1; rSTs:1)
          • Paenibacillus qinlingensis (isolates:2; rSTs:1)
          • Paenibacillus radicibacter (isolates:1; rSTs:1)
          • Paenibacillus radicis (isolates:1; rSTs:1)
          • Paenibacillus radicis (ex Xue et al. 2023) (isolates:1; rSTs:1)
          • Paenibacillus rhizolycopersici (isolates:1; rSTs:1)
          • Paenibacillus rhizophilus (isolates:1; rSTs:1)
          • Paenibacillus rhizoplanae (isolates:1; rSTs:1)
          • Paenibacillus rhizosphaerae (isolates:2; rSTs:1)
          • Paenibacillus rhizovicinus (isolates:1; rSTs:1)
          • Paenibacillus rigui (isolates:1; rSTs:1)
          • Paenibacillus riograndensis (isolates:4; rSTs:2)
          • Paenibacillus roseus (isolates:1; rSTs:1)
          • Paenibacillus rubinfantis (isolates:2; rSTs:1)
          • Paenibacillus sabinae (isolates:1; rSTs:1)
          • Paenibacillus sabuli (isolates:1; rSTs:1)
          • Paenibacillus sacheonensis (isolates:2; rSTs:1)
          • Paenibacillus sambharensis (isolates:1; rSTs:1)
          • Paenibacillus sanguinis (isolates:1; rSTs:1)
          • Paenibacillus sedimenti (isolates:1; rSTs:1)
          • Paenibacillus sediminis (isolates:1; rSTs:1)
          • Paenibacillus segetis (isolates:1; rSTs:1)
          • Paenibacillus selenitireducens (isolates:1; rSTs:1)
          • Paenibacillus senegalensis (isolates:2; rSTs:1)
          • Paenibacillus senegalimassiliensis (isolates:2; rSTs:1)
          • Paenibacillus sepulcri (isolates:1; rSTs:1)
          • Paenibacillus shirakamiensis (isolates:1; rSTs:1)
          • Paenibacillus silagei (isolates:1; rSTs:1)
          • Paenibacillus silvae (isolates:6; rSTs:4 tree)
          • Paenibacillus silvestris (isolates:1; rSTs:1)
          • Paenibacillus silvisoli (isolates:1; rSTs:1)
          • Paenibacillus sinensis (isolates:1; rSTs:1)
          • Paenibacillus sinopodophylli (isolates:1; rSTs:1)
          • Paenibacillus solanacearum (isolates:1; rSTs:1)
          • Paenibacillus solani (isolates:1; rSTs:1)
          • Paenibacillus sonchi (isolates:3; rSTs:2)
          • Paenibacillus sophorae (isolates:2; rSTs:2)
          • Paenibacillus soyae (isolates:1; rSTs:1)
          • Paenibacillus sp. (isolates:508; rSTs:465 tree)
          • Paenibacillus spiritus (isolates:1; rSTs:1)
          • Paenibacillus spongiae (isolates:1; rSTs:1)
          • Paenibacillus stellifer (isolates:1; rSTs:1)
          • Paenibacillus swuensis (isolates:1; rSTs:1)
          • Paenibacillus taichungensis (isolates:5; rSTs:4 tree)
          • Paenibacillus taihuensis (isolates:1; rSTs:1)
          • Paenibacillus taiwanensis (isolates:1; rSTs:1)
          • Paenibacillus tarimensis (isolates:1; rSTs:1)
          • Paenibacillus tengchongensis (isolates:1; rSTs:1)
          • Paenibacillus terrae (isolates:3; rSTs:2)
          • Paenibacillus terricola (isolates:1; rSTs:1)
          • Paenibacillus terrigena (isolates:1; rSTs:1)
          • Paenibacillus thalictri (isolates:1; rSTs:1)
          • Paenibacillus thermoaerophilus (isolates:1; rSTs:1)
          • Paenibacillus thermotolerans (isolates:2; rSTs:1)
          • Paenibacillus thiaminolyticus (isolates:26; rSTs:7 tree)
          • Paenibacillus tianjinensis (isolates:1; rSTs:1)
          • Paenibacillus tianmuensis (isolates:1; rSTs:1)
          • Paenibacillus timonensis (isolates:2; rSTs:2 tree)
          • Paenibacillus tritici (isolates:2; rSTs:2)
          • Paenibacillus tuaregi (isolates:2; rSTs:1)
          • Paenibacillus tundrae (isolates:2; rSTs:2)
          • Paenibacillus turicensis (isolates:1; rSTs:1)
          • Paenibacillus turpanensis (isolates:1; rSTs:1)
          • Paenibacillus typhae (isolates:2; rSTs:2)
          • Paenibacillus tyrfis (isolates:2; rSTs:2)
          • Paenibacillus uliginis (isolates:1; rSTs:1)
          • Paenibacillus urinalis (isolates:4; rSTs:3 tree)
          • Paenibacillus validus (isolates:4; rSTs:2)
          • Paenibacillus vandeheii (isolates:1; rSTs:1)
          • Paenibacillus vietnamensis (isolates:1; rSTs:1)
          • Paenibacillus vini (isolates:2; rSTs:2)
          • Paenibacillus vortex (isolates:1; rSTs:1)
          • Paenibacillus vulneris (isolates:1; rSTs:1)
          • Paenibacillus wenxiniae (isolates:1)
          • Paenibacillus whitsoniae (isolates:1; rSTs:1)
          • Paenibacillus woosongensis (isolates:3; rSTs:3 tree)
          • Paenibacillus wulumuqiensis (isolates:1; rSTs:1)
          • Paenibacillus wynnii (isolates:1; rSTs:1)
          • Paenibacillus xerothermodurans (isolates:1; rSTs:1)
          • Paenibacillus xylanexedens (isolates:1; rSTs:1)
          • Paenibacillus xylaniclasticus (isolates:1; rSTs:1)
          • Paenibacillus xylanilyticus (isolates:1; rSTs:1)
          • Paenibacillus xylanivorans (isolates:1; rSTs:1)
          • Paenibacillus yonginensis (isolates:1; rSTs:1)
          • Paenibacillus zanthoxyli (isolates:1; rSTs:1)
          • Paenibacillus zeisoli (isolates:1; rSTs:1)
        • Saccharibacillus (isolates:15; rSTs:12 tree)
          • Saccharibacillus alkalitolerans (isolates:1; rSTs:1)
          • Saccharibacillus brassicae (isolates:1; rSTs:1)
          • Saccharibacillus deserti (isolates:2; rSTs:1)
          • Saccharibacillus endophyticus (isolates:2; rSTs:1)
          • Saccharibacillus kuerlensis (isolates:2; rSTs:1)
          • Saccharibacillus qingshengii (isolates:1; rSTs:1)
          • Saccharibacillus sacchari (isolates:1; rSTs:1)
          • Saccharibacillus sp. (isolates:5; rSTs:5 tree)
        • Thermobacillus (isolates:2; rSTs:2)
          • Thermobacillus composti (isolates:1; rSTs:1)
          • Thermobacillus xylanilyticus (isolates:1; rSTs:1)
        • Xylanibacillus (isolates:2; rSTs:1)
          • Xylanibacillus composti (isolates:2; rSTs:1)
      • Pasteuriaceae (isolates:1)
        • Pasteuria (isolates:1)
          • Pasteuria penetrans (isolates:1)
      • Salinicoccaceae (isolates:6; rSTs:4 tree)
        • Lacicoccus (isolates:2; rSTs:2)
          • Lacicoccus alkaliphilus (isolates:1; rSTs:1)
          • Lacicoccus qingdaonensis (isolates:1; rSTs:1)
        • Phocicoccus (isolates:4; rSTs:2)
          • Phocicoccus pinnipedialis (isolates:2; rSTs:1)
          • Phocicoccus schoeneichii (isolates:2; rSTs:1)
      • Sporolactobacillaceae (isolates:36; rSTs:31 tree)
        • Caenibacillus (isolates:1; rSTs:1)
          • Caenibacillus caldisaponilyticus (isolates:1; rSTs:1)
        • Pullulanibacillus (isolates:3; rSTs:2)
          • Pullulanibacillus camelliae (isolates:1; rSTs:1)
          • Pullulanibacillus pueri (isolates:2; rSTs:1)
        • Scopulibacillus (isolates:2; rSTs:2)
          • Scopulibacillus daqui (isolates:1; rSTs:1)
          • Scopulibacillus darangshiensis (isolates:1; rSTs:1)
        • Sinobaca (isolates:1; rSTs:1)
          • Sinobaca qinghaiensis (isolates:1; rSTs:1)
        • Sporolactobacillus (isolates:28; rSTs:24 tree)
          • Sporolactobacillus inulinus (isolates:3; rSTs:2)
          • Sporolactobacillus kofuensis (isolates:1; rSTs:1)
          • Sporolactobacillus laevolacticus (isolates:2; rSTs:2)
          • Sporolactobacillus mangiferae (isolates:1; rSTs:1)
          • Sporolactobacillus nakayamae (isolates:1; rSTs:1)
          • Sporolactobacillus pectinivorans (isolates:1; rSTs:1)
          • Sporolactobacillus putidus (isolates:1; rSTs:1)
          • Sporolactobacillus shoreae (isolates:1; rSTs:1)
          • Sporolactobacillus shoreicorticis (isolates:1; rSTs:1)
          • Sporolactobacillus sp. (isolates:5; rSTs:6 tree)
          • Sporolactobacillus spathodeae (isolates:1; rSTs:1)
          • Sporolactobacillus terrae (isolates:7; rSTs:5 tree)
          • Sporolactobacillus vineae (isolates:3; rSTs:1)
        • Tuberibacillus (isolates:1; rSTs:1)
          • Tuberibacillus calidus (isolates:1; rSTs:1)
      • Staphylococcaceae (isolates:103586; rSTs:28989)
        • Aliicoccus (isolates:1; rSTs:1)
          • Aliicoccus persicus (isolates:1; rSTs:1)
        • Jeotgalicoccus (isolates:17; rSTs:11 tree)
          • Jeotgalicoccus aerolatus (isolates:3; rSTs:2)
          • Jeotgalicoccus coquinae (isolates:3; rSTs:1)
          • Jeotgalicoccus halotolerans (isolates:1; rSTs:1)
          • Jeotgalicoccus marinus (isolates:1; rSTs:1)
          • Jeotgalicoccus meleagridis (isolates:1; rSTs:1)
          • Jeotgalicoccus nanhaiensis (isolates:2; rSTs:1)
          • Jeotgalicoccus psychrophilus (isolates:1; rSTs:1)
          • Jeotgalicoccus saudimassiliensis (isolates:1; rSTs:1)
          • Jeotgalicoccus sp. (isolates:4; rSTs:2)
        • Macrococcoides (isolates:95; rSTs:76 tree)
          • Macrococcoides bohemicum (isolates:6; rSTs:6 tree)
          • Macrococcoides canis (isolates:22; rSTs:22 tree)
          • Macrococcoides caseolyticum (isolates:63; rSTs:44 tree)
          • Macrococcoides goetzii (isolates:4; rSTs:4 tree)
        • Macrococcus (isolates:22; rSTs:18 tree)
          • Macrococcus armenti (isolates:8; rSTs:6 tree)
          • Macrococcus bovicus (isolates:2; rSTs:2)
          • Macrococcus brunensis (isolates:3; rSTs:2)
          • Macrococcus carouselicus (isolates:1; rSTs:1)
          • Macrococcus epidermidis (isolates:3; rSTs:3 tree)
          • Macrococcus equipercicus (isolates:2; rSTs:2)
          • Macrococcus hajekii (isolates:2; rSTs:1)
          • Macrococcus lamae (isolates:1; rSTs:1)
        • Mammaliicoccus (isolates:428; rSTs:329 tree)
          • Mammaliicoccus fleurettii (isolates:13; rSTs:10 tree)
          • Mammaliicoccus lentus (isolates:38; rSTs:28 tree)
          • Mammaliicoccus sciuri (isolates:287; rSTs:234 tree)
          • Mammaliicoccus sp. (isolates:66; rSTs:41 tree)
          • Mammaliicoccus stepanovicii (isolates:3; rSTs:1)
          • Mammaliicoccus vitulinus (isolates:21; rSTs:15 tree)
        • Nosocomiicoccus (isolates:9; rSTs:9 tree)
          • Nosocomiicoccus ampullae (isolates:3; rSTs:2)
          • Nosocomiicoccus massiliensis (isolates:3; rSTs:3 tree)
          • Nosocomiicoccus sp. (isolates:3; rSTs:4 tree)
        • Salinicoccus (isolates:25; rSTs:22 tree)
          • Salinicoccus albus (isolates:1; rSTs:1)
          • Salinicoccus carnicancri (isolates:1; rSTs:1)
          • Salinicoccus cyprini (isolates:1; rSTs:1)
          • Salinicoccus halitifaciens (isolates:2; rSTs:1)
          • Salinicoccus halodurans (isolates:2; rSTs:1)
          • Salinicoccus hispanicus (isolates:1; rSTs:1)
          • Salinicoccus jeotgali (isolates:1; rSTs:1)
          • Salinicoccus kekensis (isolates:1; rSTs:1)
          • Salinicoccus luteus (isolates:1; rSTs:1)
          • Salinicoccus roseus (isolates:10; rSTs:9 tree)
          • Salinicoccus sediminis (isolates:1; rSTs:1)
          • Salinicoccus sp. (isolates:3; rSTs:3 tree)
        • Staphylococcus (isolates:102989; rSTs:28523)
          • Staphylococcus agnetis (isolates:60; rSTs:39 tree)
          • Staphylococcus americanisciuri (isolates:1; rSTs:1)
          • Staphylococcus argensis (isolates:9; rSTs:2)
          • Staphylococcus argenteus (isolates:279; rSTs:86 tree)
          • Staphylococcus arlettae (isolates:51; rSTs:42 tree)
          • Staphylococcus aureus (isolates:90399; rSTs:21775)
          • Staphylococcus auricularis (isolates:15; rSTs:10 tree)
          • Staphylococcus borealis (isolates:18; rSTs:17 tree)
          • Staphylococcus caeli (isolates:2; rSTs:1)
          • Staphylococcus caledonicus (isolates:1; rSTs:1)
          • Staphylococcus canis (isolates:1; rSTs:1)
          • Staphylococcus capitis (isolates:278; rSTs:158 tree)
          • Staphylococcus caprae (isolates:36; rSTs:22 tree)
          • Staphylococcus carnosus (isolates:23; rSTs:9 tree)
          • Staphylococcus casei (isolates:2; rSTs:2)
          • Staphylococcus chromogenes (isolates:165; rSTs:114 tree)
          • Staphylococcus coagulans (isolates:206; rSTs:102 tree)
          • Staphylococcus cohnii (isolates:58; rSTs:42 tree)
          • Staphylococcus condimenti (isolates:11; rSTs:4 tree)
          • Staphylococcus cornubiensis (isolates:1; rSTs:1)
          • Staphylococcus croceilyticus (isolates:2; rSTs:1)
          • Staphylococcus debuckii (isolates:2; rSTs:2)
          • Staphylococcus delphini (isolates:43; rSTs:33 tree)
          • Staphylococcus devriesei (isolates:12; rSTs:11 tree)
          • Staphylococcus durrellii (isolates:1; rSTs:1)
          • Staphylococcus edaphicus (isolates:2; rSTs:1)
          • Staphylococcus epidermidis (isolates:4669; rSTs:1524 tree)
          • Staphylococcus equorum (isolates:102; rSTs:89 tree)
          • Staphylococcus felis (isolates:43; rSTs:26 tree)
          • Staphylococcus gallinarum (isolates:53; rSTs:38 tree)
          • Staphylococcus haemolyticus (isolates:628; rSTs:395 tree)
          • Staphylococcus hominis (isolates:318; rSTs:198 tree)
          • Staphylococcus hsinchuensis (isolates:1; rSTs:1)
          • Staphylococcus hyicus (isolates:27; rSTs:20 tree)
          • Staphylococcus intermedius (isolates:9; rSTs:4 tree)
          • Staphylococcus kloosii (isolates:10; rSTs:7 tree)
          • Staphylococcus lloydii (isolates:4; rSTs:2)
          • Staphylococcus lugdunensis (isolates:119; rSTs:47 tree)
          • Staphylococcus lutrae (isolates:2; rSTs:1)
          • Staphylococcus marylandisciuri (isolates:1; rSTs:1)
          • Staphylococcus massiliensis (isolates:6; rSTs:5 tree)
          • Staphylococcus microti (isolates:3; rSTs:1)
          • Staphylococcus muscae (isolates:4; rSTs:1)
          • Staphylococcus nepalensis (isolates:30; rSTs:19 tree)
          • Staphylococcus pasteuri (isolates:47; rSTs:44 tree)
          • Staphylococcus petrasii (isolates:9; rSTs:4 tree)
          • Staphylococcus pettenkoferi (isolates:55; rSTs:46 tree)
          • Staphylococcus piscifermentans (isolates:2; rSTs:1)
          • Staphylococcus pragensis (isolates:2; rSTs:1)
          • Staphylococcus pseudintermedius (isolates:3968; rSTs:2810 tree)
          • Staphylococcus pseudoxylosus (isolates:18; rSTs:15 tree)
          • Staphylococcus ratti (isolates:1; rSTs:1)
          • Staphylococcus rostri (isolates:2; rSTs:2)
          • Staphylococcus roterodami (isolates:1; rSTs:1)
          • Staphylococcus saccharolyticus (isolates:32; rSTs:19 tree)
          • Staphylococcus saprophyticus (isolates:194; rSTs:119 tree)
          • Staphylococcus schleiferi (isolates:50; rSTs:28 tree)
          • Staphylococcus schweitzeri (isolates:9; rSTs:12 tree)
          • Staphylococcus shinii (isolates:17; rSTs:15 tree)
          • Staphylococcus simiae (isolates:9; rSTs:3 tree)
          • Staphylococcus simulans (isolates:97; rSTs:76 tree)
          • Staphylococcus singaporensis (isolates:6; rSTs:5 tree)
          • Staphylococcus sp. (isolates:402; rSTs:226 tree)
          • Staphylococcus succinus (isolates:26; rSTs:20 tree)
          • Staphylococcus taiwanensis (isolates:1; rSTs:1)
          • Staphylococcus ureilyticus (isolates:20; rSTs:15 tree)
          • Staphylococcus warneri (isolates:192; rSTs:115 tree)
          • Staphylococcus xylosus (isolates:122; rSTs:87 tree)
      • Thermoactinomycetaceae (isolates:67; rSTs:58 tree)
        • Baia (isolates:1; rSTs:1)
          • Baia soyae (isolates:1; rSTs:1)
        • Croceifilum (isolates:1; rSTs:1)
          • Croceifilum oryzae (isolates:1; rSTs:1)
        • Desmospora (isolates:2; rSTs:2)
          • Desmospora activa (isolates:1; rSTs:1)
          • Desmospora profundinema (isolates:1; rSTs:1)
        • Hazenella (isolates:1; rSTs:1)
          • Hazenella coriacea (isolates:1; rSTs:1)
        • Kroppenstedtia (isolates:5; rSTs:4 tree)
          • Kroppenstedtia eburnea (isolates:2; rSTs:1)
          • Kroppenstedtia guangzhouensis (isolates:1; rSTs:1)
          • Kroppenstedtia pulmonis (isolates:1; rSTs:1)
          • Kroppenstedtia sanguinis (isolates:1; rSTs:1)
        • Laceyella (isolates:6; rSTs:6 tree)
          • Laceyella sacchari (isolates:3; rSTs:3 tree)
          • Laceyella sediminis (isolates:1; rSTs:1)
          • Laceyella tengchongensis (isolates:2; rSTs:2)
        • Lihuaxuella (isolates:1; rSTs:1)
          • Lihuaxuella thermophila (isolates:1; rSTs:1)
        • Marininema (isolates:2; rSTs:2)
          • Marininema halotolerans (isolates:1; rSTs:1)
          • Marininema mesophilum (isolates:1; rSTs:1)
        • Marinithermofilum (isolates:1; rSTs:1)
          • Marinithermofilum abyssi (isolates:1; rSTs:1)
        • Melghirimyces (isolates:3; rSTs:3 tree)
          • Melghirimyces algeriensis (isolates:1; rSTs:1)
          • Melghirimyces profundicolus (isolates:1; rSTs:1)
          • Melghirimyces thermohalophilus (isolates:1; rSTs:1)
        • Novibacillus (isolates:1; rSTs:1)
          • Novibacillus thermophilus (isolates:1; rSTs:1)
        • Paenactinomyces (isolates:2; rSTs:1)
          • Paenactinomyces guangxiensis (isolates:2; rSTs:1)
        • Paludifilum (isolates:1; rSTs:1)
          • Paludifilum halophilum (isolates:1; rSTs:1)
        • Planifilum (isolates:2; rSTs:2)
          • Planifilum fimeticola (isolates:1; rSTs:1)
          • Planifilum fulgidum (isolates:1; rSTs:1)
        • Polycladomyces (isolates:3; rSTs:3 tree)
          • Polycladomyces abyssicola (isolates:1; rSTs:1)
          • Polycladomyces subterraneus (isolates:1; rSTs:1)
          • Polycladomyces zharkentensis (isolates:1; rSTs:1)
        • Polycladospora (isolates:2; rSTs:2)
          • Polycladospora coralii (isolates:2; rSTs:2)
        • Risungbinella (isolates:2; rSTs:1)
          • Risungbinella massiliensis (isolates:2; rSTs:1)
        • Seinonella (isolates:1; rSTs:1)
          • Seinonella peptonophila (isolates:1; rSTs:1)
        • Shimazuella (isolates:3; rSTs:3 tree)
          • Shimazuella alba (isolates:1; rSTs:1)
          • Shimazuella kribbensis (isolates:1; rSTs:1)
          • Shimazuella soli (isolates:1; rSTs:1)
        • Staphylospora (isolates:1; rSTs:1)
          • Staphylospora marina (isolates:1; rSTs:1)
        • Thermoactinomyces (isolates:24; rSTs:18 tree)
          • Thermoactinomyces daqus (isolates:2; rSTs:1)
          • Thermoactinomyces intermedius (isolates:3; rSTs:1)
          • Thermoactinomyces mirandus (isolates:1; rSTs:1)
          • Thermoactinomyces sp. (isolates:11; rSTs:11 tree)
          • Thermoactinomyces vulgaris (isolates:7; rSTs:4 tree)
        • Thermoflavimicrobium (isolates:2; rSTs:2)
          • Thermoflavimicrobium daqui (isolates:1; rSTs:1)
          • Thermoflavimicrobium dichotomicum (isolates:1; rSTs:1)
    • Lactobacillales (isolates:121610; rSTs:40205)
      • Aerococcaceae (isolates:222; rSTs:160 tree)
        • Abiotrophia (isolates:1; rSTs:1)
          • Abiotrophia defectiva (isolates:1; rSTs:1)
        • Aerococcus (isolates:181; rSTs:120 tree)
          • Aerococcus agrisoli (isolates:1; rSTs:1)
          • Aerococcus christensenii (isolates:6; rSTs:5 tree)
          • Aerococcus kribbianus (isolates:2; rSTs:1)
          • Aerococcus loyolae (isolates:14; rSTs:9 tree)
          • Aerococcus mictus (isolates:45; rSTs:22 tree)
          • Aerococcus sanguinicola (isolates:12; rSTs:9 tree)
          • Aerococcus sp. (isolates:27; rSTs:24 tree)
          • Aerococcus suis (isolates:1; rSTs:1)
          • Aerococcus tenax (isolates:12; rSTs:10 tree)
          • Aerococcus urinae (isolates:36; rSTs:20 tree)
          • Aerococcus urinaeequi (isolates:14; rSTs:10 tree)
          • Aerococcus urinaehominis (isolates:2; rSTs:1)
          • Aerococcus viridans (isolates:9; rSTs:7 tree)
        • Dolosicoccus (isolates:3; rSTs:3 tree)
          • Dolosicoccus paucivorans (isolates:3; rSTs:3 tree)
        • Eremococcus (isolates:2; rSTs:2)
          • Eremococcus coleocola (isolates:2; rSTs:2)
        • Facklamia (isolates:14; rSTs:12 tree)
          • Facklamia hominis (isolates:7; rSTs:6 tree)
          • Facklamia lactis (isolates:2; rSTs:2)
          • Facklamia languida (isolates:1; rSTs:1)
          • Facklamia miroungae (isolates:2; rSTs:1)
          • Facklamia sp. (isolates:2; rSTs:2)
        • Falseniella (isolates:2; rSTs:2)
          • Falseniella ignava (isolates:2; rSTs:2)
        • Fundicoccus (isolates:3; rSTs:3 tree)
          • Fundicoccus ignavus (isolates:3; rSTs:3 tree)
        • Globicatella (isolates:6; rSTs:8 tree)
          • Globicatella sanguinis (isolates:3; rSTs:3 tree)
          • Globicatella sp. (isolates:1; rSTs:3 tree)
          • Globicatella sulfidifaciens (isolates:2; rSTs:2)
        • Hutsoniella (isolates:1; rSTs:1)
          • Hutsoniella sourekii (isolates:1; rSTs:1)
        • Ignavigranum (isolates:2; rSTs:2)
          • Ignavigranum ruoffiae (isolates:2; rSTs:2)
        • Ruoffia (isolates:5; rSTs:4 tree)
          • Ruoffia halotolerans (isolates:1; rSTs:1)
          • Ruoffia tabacinasalis (isolates:4; rSTs:3 tree)
        • Suicoccus (isolates:1; rSTs:1)
          • Suicoccus acidiformans (isolates:1; rSTs:1)
        • Vaginisenegalia (isolates:1; rSTs:1)
          • Vaginisenegalia massiliensis (isolates:1; rSTs:1)
      • Carnobacteriaceae (isolates:250; rSTs:164 tree)
        • Alkalibacterium (isolates:13; rSTs:12 tree)
          • Alkalibacterium gilvum (isolates:1; rSTs:1)
          • Alkalibacterium iburiense (isolates:1; rSTs:1)
          • Alkalibacterium indicireducens (isolates:1; rSTs:1)
          • Alkalibacterium kapii (isolates:1; rSTs:1)
          • Alkalibacterium olivapovliticus (isolates:1; rSTs:1)
          • Alkalibacterium pelagium (isolates:2; rSTs:1)
          • Alkalibacterium putridalgicola (isolates:2; rSTs:1)
          • Alkalibacterium sp. (isolates:2; rSTs:3 tree)
          • Alkalibacterium subtropicum (isolates:1; rSTs:1)
          • Alkalibacterium thalassium (isolates:1; rSTs:1)
        • Allofustis (isolates:1; rSTs:1)
          • Allofustis seminis (isolates:1; rSTs:1)
        • Alloiococcus (isolates:4; rSTs:1)
          • Alloiococcus otitis (isolates:4; rSTs:1)
        • Atopobacter (isolates:1; rSTs:1)
          • Atopobacter phocae (isolates:1; rSTs:1)
        • Atopococcus (isolates:1; rSTs:1)
          • Atopococcus tabaci (isolates:1; rSTs:1)
        • Atopostipes (isolates:1; rSTs:1)
          • Atopostipes suicloacalis (isolates:1; rSTs:1)
        • Carnobacterium (isolates:126; rSTs:59 tree)
          • Carnobacterium alterfunditum (isolates:2; rSTs:1)
          • Carnobacterium divergens (isolates:54; rSTs:17 tree)
          • Carnobacterium funditum (isolates:1; rSTs:1)
          • Carnobacterium gallinarum (isolates:1; rSTs:1)
          • Carnobacterium iners (isolates:2; rSTs:1)
          • Carnobacterium inhibens (isolates:4; rSTs:4 tree)
          • Carnobacterium jeotgali (isolates:2; rSTs:1)
          • Carnobacterium maltaromaticum (isolates:47; rSTs:22 tree)
          • Carnobacterium mobile (isolates:2; rSTs:2)
          • Carnobacterium pleistocenium (isolates:1; rSTs:1)
          • Carnobacterium sp. (isolates:8; rSTs:7 tree)
          • Carnobacterium viridans (isolates:2; rSTs:1)
        • Desemzia (isolates:5; rSTs:5 tree)
          • Desemzia incerta (isolates:3; rSTs:3 tree)
          • Desemzia sp. (isolates:2; rSTs:2)
        • Dolosigranulum (isolates:36; rSTs:34 tree)
          • Dolosigranulum pigrum (isolates:32; rSTs:30 tree)
          • Dolosigranulum sp. (isolates:4; rSTs:4 tree)
        • Granulicatella (isolates:20; rSTs:17 tree)
          • Granulicatella adiacens (isolates:10; rSTs:6 tree)
          • Granulicatella balaenopterae (isolates:1; rSTs:1)
          • Granulicatella elegans (isolates:2; rSTs:2)
          • Granulicatella seriolae (isolates:1; rSTs:1)
          • Granulicatella sp. (isolates:6; rSTs:7 tree)
        • Isobaculum (isolates:1; rSTs:1)
          • Isobaculum melis (isolates:1; rSTs:1)
        • Jeotgalibaca (isolates:7; rSTs:7 tree)
          • Jeotgalibaca arthritidis (isolates:1; rSTs:1)
          • Jeotgalibaca ciconiae (isolates:1; rSTs:1)
          • Jeotgalibaca dankookensis (isolates:3; rSTs:2)
          • Jeotgalibaca porci (isolates:1; rSTs:1)
          • Jeotgalibaca sp. (isolates:1; rSTs:2)
        • Lacticigenium (isolates:1; rSTs:1)
          • Lacticigenium naphthae (isolates:1; rSTs:1)
        • Marinilactibacillus (isolates:13; rSTs:11 tree)
          • Marinilactibacillus kalidii (isolates:1; rSTs:1)
          • Marinilactibacillus piezotolerans (isolates:2; rSTs:2)
          • Marinilactibacillus psychrotolerans (isolates:7; rSTs:5 tree)
          • Marinilactibacillus sp. (isolates:3; rSTs:3 tree)
        • Pisciglobus (isolates:1; rSTs:1)
          • Pisciglobus halotolerans (isolates:1; rSTs:1)
        • Trichococcus (isolates:19; rSTs:11 tree)
          • Trichococcus alkaliphilus (isolates:1; rSTs:1)
          • Trichococcus collinsii (isolates:2; rSTs:1)
          • Trichococcus flocculiformis (isolates:3; rSTs:2)
          • Trichococcus ilyis (isolates:2; rSTs:1)
          • Trichococcus paludicola (isolates:1)
          • Trichococcus palustris (isolates:2; rSTs:1)
          • Trichococcus pasteurii (isolates:3; rSTs:1)
          • Trichococcus patagoniensis (isolates:1; rSTs:1)
          • Trichococcus shcherbakoviae (isolates:2; rSTs:2)
          • Trichococcus sp. (isolates:2; rSTs:1)
      • Enterococcaceae (isolates:29808; rSTs:5854)
        • Bavariicoccus (isolates:1; rSTs:1)
          • Bavariicoccus seileri (isolates:1; rSTs:1)
        • Catellicoccus (isolates:1; rSTs:1)
          • Catellicoccus marimammalium (isolates:1; rSTs:1)
        • Enterococcus (isolates:29575; rSTs:5699)
          • Enterococcus alcedinis (isolates:2; rSTs:1)
          • Enterococcus alishanensis (isolates:1; rSTs:1)
          • Enterococcus aquimarinus (isolates:1; rSTs:1)
          • Enterococcus asini (isolates:14; rSTs:11 tree)
          • Enterococcus avium (isolates:133; rSTs:83 tree)
          • Enterococcus caccae (isolates:3; rSTs:1)
          • Enterococcus canintestini (isolates:2; rSTs:2)
          • Enterococcus canis (isolates:2; rSTs:1)
          • Enterococcus casseliflavus (isolates:128; rSTs:97 tree)
          • Enterococcus cecorum (isolates:254; rSTs:151 tree)
          • Enterococcus columbae (isolates:4; rSTs:1)
          • Enterococcus crotali (isolates:1; rSTs:1)
          • Enterococcus devriesei (isolates:3; rSTs:3 tree)
          • Enterococcus diestrammenae (isolates:3; rSTs:3 tree)
          • Enterococcus dispar (isolates:6; rSTs:5 tree)
          • Enterococcus dongliensis (isolates:16; rSTs:13 tree)
          • Enterococcus durans (isolates:165; rSTs:50 tree)
          • Enterococcus entomosocium (isolates:10; rSTs:3 tree)
          • Enterococcus faecalis (isolates:7905; rSTs:2332 tree)
          • Enterococcus faecium (isolates:19706; rSTs:2160 tree)
          • Enterococcus florum (isolates:1; rSTs:1)
          • Enterococcus gallinarum (isolates:169; rSTs:108 tree)
          • Enterococcus gilvus (isolates:4; rSTs:3 tree)
          • Enterococcus haemoperoxidus (isolates:2; rSTs:1)
          • Enterococcus hermanniensis (isolates:1; rSTs:1)
          • Enterococcus hirae (isolates:319; rSTs:126 tree)
          • Enterococcus hulanensis (isolates:9; rSTs:4 tree)
          • Enterococcus innesii (isolates:14; rSTs:9 tree)
          • Enterococcus italicus (isolates:6; rSTs:5 tree)
          • Enterococcus lactis (isolates:250; rSTs:119 tree)
          • Enterococcus larvae (isolates:1; rSTs:1)
          • Enterococcus lemanii (isolates:1; rSTs:1)
          • Enterococcus malodoratus (isolates:15; rSTs:6 tree)
          • Enterococcus massiliensis (isolates:2; rSTs:1)
          • Enterococcus mediterraneensis (isolates:1; rSTs:1)
          • Enterococcus montenegrensis (isolates:1; rSTs:1)
          • Enterococcus moraviensis (isolates:2; rSTs:1)
          • Enterococcus mundtii (isolates:63; rSTs:39 tree)
          • Enterococcus nangangensis (isolates:1; rSTs:1)
          • Enterococcus pallens (isolates:3; rSTs:1)
          • Enterococcus phoeniculicola (isolates:2; rSTs:1)
          • Enterococcus pingfangensis (isolates:1; rSTs:1)
          • Enterococcus plantarum (isolates:4; rSTs:4 tree)
          • Enterococcus pseudoavium (isolates:6; rSTs:5 tree)
          • Enterococcus quebecensis (isolates:2; rSTs:1)
          • Enterococcus raffinosus (isolates:41; rSTs:23 tree)
          • Enterococcus ratti (isolates:1; rSTs:1)
          • Enterococcus rivorum (isolates:2; rSTs:1)
          • Enterococcus rotai (isolates:3; rSTs:2)
          • Enterococcus saccharolyticus (isolates:4; rSTs:2)
          • Enterococcus saigonensis (isolates:1; rSTs:1)
          • Enterococcus silesiacus (isolates:1; rSTs:1)
          • Enterococcus songbeiensis (isolates:1; rSTs:1)
          • Enterococcus sp. (isolates:229; rSTs:269 tree)
          • Enterococcus spodopteracolus (isolates:4; rSTs:2)
          • Enterococcus sulfureus (isolates:1; rSTs:1)
          • Enterococcus termitis (isolates:2; rSTs:1)
          • Enterococcus thailandicus (isolates:28; rSTs:20 tree)
          • Enterococcus timonensis (isolates:1; rSTs:1)
          • Enterococcus ureasiticus (isolates:2; rSTs:2)
          • Enterococcus ureilyticus (isolates:4; rSTs:2)
          • Enterococcus viikkiensis (isolates:2; rSTs:2)
          • Enterococcus villorum (isolates:4; rSTs:2)
          • Enterococcus wangshanyuanii (isolates:2; rSTs:1)
          • Enterococcus xiangfangensis (isolates:3; rSTs:2)
        • Melissococcus (isolates:34; rSTs:13 tree)
          • Melissococcus plutonius (isolates:34; rSTs:13 tree)
        • Pilibacter (isolates:1; rSTs:1)
          • Pilibacter termitis (isolates:1; rSTs:1)
        • Tetragenococcus (isolates:100; rSTs:61 tree)
          • Tetragenococcus halophilus (isolates:71; rSTs:49 tree)
          • Tetragenococcus koreensis (isolates:22; rSTs:8 tree)
          • Tetragenococcus muriaticus (isolates:3; rSTs:2)
          • Tetragenococcus osmophilus (isolates:2; rSTs:1)
          • Tetragenococcus solitarius (isolates:2; rSTs:1)
        • Vagococcus (isolates:96; rSTs:78 tree)
          • Vagococcus acidifermentans (isolates:1; rSTs:1)
          • Vagococcus allomyrinae (isolates:1; rSTs:1)
          • Vagococcus bubulae (isolates:2; rSTs:2)
          • Vagococcus carniphilus (isolates:9; rSTs:7 tree)
          • Vagococcus coleopterorum (isolates:1; rSTs:1)
          • Vagococcus elongatus (isolates:1; rSTs:1)
          • Vagococcus entomophilus (isolates:1; rSTs:1)
          • Vagococcus fessus (isolates:1; rSTs:1)
          • Vagococcus fluvialis (isolates:27; rSTs:18 tree)
          • Vagococcus humatus (isolates:1; rSTs:1)
          • Vagococcus hydrophili (isolates:1; rSTs:1)
          • Vagococcus intermedius (isolates:2; rSTs:1)
          • Vagococcus luciliae (isolates:1; rSTs:1)
          • Vagococcus lutrae (isolates:27; rSTs:23 tree)
          • Vagococcus martis (isolates:1; rSTs:1)
          • Vagococcus penaei (isolates:2; rSTs:2)
          • Vagococcus proximus (isolates:1; rSTs:1)
          • Vagococcus salmoninarum (isolates:2; rSTs:2)
          • Vagococcus silagei (isolates:1; rSTs:1)
          • Vagococcus sp. (isolates:5; rSTs:5 tree)
          • Vagococcus teuberi (isolates:2; rSTs:2)
          • Vagococcus vulneris (isolates:1; rSTs:1)
          • Vagococcus xieshaowenii (isolates:2; rSTs:1)
          • Vagococcus zengguangii (isolates:3; rSTs:2)
      • Lactobacillaceae (isolates:8875; rSTs:4674)
        • Acetilactobacillus (isolates:1; rSTs:1)
          • Acetilactobacillus jinshanensis (isolates:1; rSTs:1)
        • Agrilactobacillus (isolates:4; rSTs:3 tree)
          • Agrilactobacillus composti (isolates:2; rSTs:1)
          • Agrilactobacillus fermenti (isolates:1; rSTs:1)
          • Agrilactobacillus yilanensis (isolates:1; rSTs:1)
        • Amylolactobacillus (isolates:3; rSTs:1)
          • Amylolactobacillus amylophilus (isolates:3; rSTs:1)
        • Apilactobacillus (isolates:133; rSTs:99 tree)
          • Apilactobacillus apinorum (isolates:4; rSTs:3 tree)
          • Apilactobacillus apisilvae (isolates:1; rSTs:1)
          • Apilactobacillus bombintestini (isolates:1; rSTs:1)
          • Apilactobacillus kunkeei (isolates:79; rSTs:33 tree)
          • Apilactobacillus micheneri (isolates:22; rSTs:10 tree)
          • Apilactobacillus nanyangensis (isolates:3; rSTs:3 tree)
          • Apilactobacillus ozensis (isolates:2; rSTs:2)
          • Apilactobacillus quenuiae (isolates:1; rSTs:1)
          • Apilactobacillus sp. (isolates:1; rSTs:29 tree)
          • Apilactobacillus timberlakei (isolates:9; rSTs:6 tree)
          • Apilactobacillus waqarii (isolates:2; rSTs:2)
          • Apilactobacillus xinyiensis (isolates:7; rSTs:7 tree)
          • Apilactobacillus zhangqiuensis (isolates:1; rSTs:1)
        • Bombilactobacillus (isolates:14; rSTs:14 tree)
          • Bombilactobacillus apium (isolates:1; rSTs:1)
          • Bombilactobacillus bombi (isolates:4; rSTs:4 tree)
          • Bombilactobacillus folatiphilus (isolates:1; rSTs:1)
          • Bombilactobacillus mellifer (isolates:1; rSTs:1)
          • Bombilactobacillus mellis (isolates:6; rSTs:6 tree)
          • Bombilactobacillus thymidiniphilus (isolates:1; rSTs:1)
        • Companilactobacillus (isolates:81; rSTs:56 tree)
          • Companilactobacillus alimentarius (isolates:4; rSTs:2)
          • Companilactobacillus allii (isolates:3; rSTs:2)
          • Companilactobacillus baiquanensis (isolates:1; rSTs:1)
          • Companilactobacillus bobalius (isolates:3; rSTs:2)
          • Companilactobacillus crustorum (isolates:5; rSTs:3 tree)
          • Companilactobacillus farciminis (isolates:6; rSTs:3 tree)
          • Companilactobacillus formosensis (isolates:2; rSTs:1)
          • Companilactobacillus furfuricola (isolates:1; rSTs:1)
          • Companilactobacillus futsaii (isolates:4; rSTs:2)
          • Companilactobacillus ginsenosidimutans (isolates:1; rSTs:1)
          • Companilactobacillus halodurans (isolates:2; rSTs:2)
          • Companilactobacillus heilongjiangensis (isolates:2; rSTs:1)
          • Companilactobacillus huachuanensis (isolates:1; rSTs:1)
          • Companilactobacillus hulinensis (isolates:1; rSTs:1)
          • Companilactobacillus insicii (isolates:1; rSTs:1)
          • Companilactobacillus jidongensis (isolates:1; rSTs:1)
          • Companilactobacillus kedongensis (isolates:1; rSTs:1)
          • Companilactobacillus keshanensis (isolates:1; rSTs:1)
          • Companilactobacillus kimchiensis (isolates:1; rSTs:1)
          • Companilactobacillus kimchii (isolates:4; rSTs:1)
          • Companilactobacillus metriopterae (isolates:1; rSTs:1)
          • Companilactobacillus mindensis (isolates:2; rSTs:1)
          • Companilactobacillus mishanensis (isolates:4; rSTs:4 tree)
          • Companilactobacillus muriivasis (isolates:2; rSTs:2)
          • Companilactobacillus musae (isolates:3; rSTs:1)
          • Companilactobacillus nantensis (isolates:2; rSTs:1)
          • Companilactobacillus nodensis (isolates:3; rSTs:1)
          • Companilactobacillus nuruki (isolates:1; rSTs:1)
          • Companilactobacillus pabuli (isolates:2; rSTs:2)
          • Companilactobacillus paralimentarius (isolates:5; rSTs:2)
          • Companilactobacillus sp. (isolates:4; rSTs:5 tree)
          • Companilactobacillus suantsaicola (isolates:1; rSTs:1)
          • Companilactobacillus tucceti (isolates:1; rSTs:1)
          • Companilactobacillus versmoldensis (isolates:2; rSTs:1)
          • Companilactobacillus zhachilii (isolates:2; rSTs:2)
          • Companilactobacillus zhongbaensis (isolates:1; rSTs:1)
        • Convivina (isolates:6; rSTs:4 tree)
          • Convivina intestini (isolates:3; rSTs:2)
          • Convivina praedatoris (isolates:3; rSTs:2)
        • Dellaglioa (isolates:23; rSTs:9 tree)
          • Dellaglioa algida (isolates:19; rSTs:7 tree)
          • Dellaglioa carnosa (isolates:4; rSTs:2)
        • Eupransor (isolates:1; rSTs:1)
          • Eupransor demetentiae (isolates:1; rSTs:1)
        • Fructilactobacillus (isolates:85; rSTs:48 tree)
          • Fructilactobacillus carniphilus (isolates:1; rSTs:1)
          • Fructilactobacillus cliffordii (isolates:2; rSTs:2)
          • Fructilactobacillus florum (isolates:3; rSTs:3 tree)
          • Fructilactobacillus fructivorans (isolates:14; rSTs:5 tree)
          • Fructilactobacillus hinvesii (isolates:1; rSTs:1)
          • Fructilactobacillus ixorae (isolates:1; rSTs:1)
          • Fructilactobacillus lindneri (isolates:12; rSTs:3 tree)
          • Fructilactobacillus myrtifloralis (isolates:1; rSTs:1)
          • Fructilactobacillus sanfranciscensis (isolates:50; rSTs:31 tree)
        • Fructobacillus (isolates:45; rSTs:35 tree)
          • Fructobacillus americanaquae (isolates:1; rSTs:1)
          • Fructobacillus apis (isolates:1; rSTs:1)
          • Fructobacillus broussonetiae (isolates:1; rSTs:1)
          • Fructobacillus cardui (isolates:5; rSTs:5 tree)
          • Fructobacillus durionis (isolates:1; rSTs:1)
          • Fructobacillus evanidus (isolates:7; rSTs:2)
          • Fructobacillus ficulneus (isolates:1; rSTs:1)
          • Fructobacillus fructosus (isolates:12; rSTs:9 tree)
          • Fructobacillus papyriferae (isolates:2; rSTs:1)
          • Fructobacillus papyrifericola (isolates:1; rSTs:1)
          • Fructobacillus parabroussonetiae (isolates:2; rSTs:2)
          • Fructobacillus pseudoficulneus (isolates:2; rSTs:1)
          • Fructobacillus sp. (isolates:2; rSTs:2 tree)
          • Fructobacillus tropaeoli (isolates:7; rSTs:7 tree)
        • Furfurilactobacillus (isolates:16; rSTs:8 tree)
          • Furfurilactobacillus milii (isolates:6; rSTs:4 tree)
          • Furfurilactobacillus rossiae (isolates:8; rSTs:3 tree)
          • Furfurilactobacillus siliginis (isolates:2; rSTs:1)
        • Holzapfeliella (isolates:2; rSTs:2)
          • Holzapfeliella floricola (isolates:1; rSTs:1)
          • Holzapfeliella sp. (isolates:1; rSTs:1)
        • Lacticaseibacillus (isolates:1061; rSTs:433 tree)
          • Lacticaseibacillus absianus (isolates:1; rSTs:1)
          • Lacticaseibacillus baoqingensis (isolates:1; rSTs:1)
          • Lacticaseibacillus brantae (isolates:1; rSTs:1)
          • Lacticaseibacillus camelliae (isolates:2; rSTs:1)
          • Lacticaseibacillus casei (isolates:22; rSTs:2 tree)
          • Lacticaseibacillus chiayiensis (isolates:4; rSTs:4 tree)
          • Lacticaseibacillus daqingensis (isolates:1; rSTs:1)
          • Lacticaseibacillus hegangensis (isolates:1; rSTs:1)
          • Lacticaseibacillus huelsenbergensis (isolates:2; rSTs:2)
          • Lacticaseibacillus hulanensis (isolates:1; rSTs:1)
          • Lacticaseibacillus jixianensis (isolates:1; rSTs:1)
          • Lacticaseibacillus kribbianus (isolates:1; rSTs:1)
          • Lacticaseibacillus manihotivorans (isolates:2; rSTs:1)
          • Lacticaseibacillus mingshuiensis (isolates:3; rSTs:3 tree)
          • Lacticaseibacillus nasuensis (isolates:3; rSTs:2)
          • Lacticaseibacillus pabuli (isolates:1; rSTs:1)
          • Lacticaseibacillus pantheris (isolates:4; rSTs:2)
          • Lacticaseibacillus paracasei (isolates:447; rSTs:246 tree)
          • Lacticaseibacillus parahuelsenbergensis (isolates:1; rSTs:1)
          • Lacticaseibacillus parakribbianus (isolates:1; rSTs:1)
          • Lacticaseibacillus porcinae (isolates:1; rSTs:1)
          • Lacticaseibacillus rhamnosus (isolates:528; rSTs:134 tree)
          • Lacticaseibacillus salsurivasis (isolates:1; rSTs:1)
          • Lacticaseibacillus saniviri (isolates:4; rSTs:1)
          • Lacticaseibacillus sharpeae (isolates:2; rSTs:1)
          • Lacticaseibacillus songhuajiangensis (isolates:1; rSTs:1)
          • Lacticaseibacillus sp. (isolates:4; rSTs:3 tree)
          • Lacticaseibacillus suibinensis (isolates:2; rSTs:2)
          • Lacticaseibacillus suilingensis (isolates:2; rSTs:2)
          • Lacticaseibacillus thailandensis (isolates:2; rSTs:2)
          • Lacticaseibacillus yichunensis (isolates:1; rSTs:1)
          • Lacticaseibacillus zeae (isolates:11; rSTs:8 tree)
          • Lacticaseibacillus zhaodongensis (isolates:1; rSTs:1)
          • Lacticasibacillus styriensis (isolates:1; rSTs:1)
        • Lactiplantibacillus (isolates:1395; rSTs:570 tree)
          • Lactiplantibacillus argentoratensis (isolates:16; rSTs:9 tree)
          • Lactiplantibacillus brownii (isolates:1; rSTs:1)
          • Lactiplantibacillus carotarum (isolates:1; rSTs:1)
          • Lactiplantibacillus daoliensis (isolates:1; rSTs:1)
          • Lactiplantibacillus daowaiensis (isolates:1)
          • Lactiplantibacillus dongliensis (isolates:1; rSTs:1)
          • Lactiplantibacillus fabifermentans (isolates:3; rSTs:2)
          • Lactiplantibacillus garii (isolates:1; rSTs:1)
          • Lactiplantibacillus herbarum (isolates:1; rSTs:1)
          • Lactiplantibacillus modestisalitolerans (isolates:1; rSTs:1)
          • Lactiplantibacillus mudanjiangensis (isolates:5; rSTs:3 tree)
          • Lactiplantibacillus nangangensis (isolates:1; rSTs:1)
          • Lactiplantibacillus paraplantarum (isolates:23; rSTs:14 tree)
          • Lactiplantibacillus paraxiangfangensis (isolates:3; rSTs:3 tree)
          • Lactiplantibacillus pentosus (isolates:100; rSTs:59 tree)
          • Lactiplantibacillus pingfangensis (isolates:1; rSTs:1)
          • Lactiplantibacillus plajomi (isolates:2; rSTs:1)
          • Lactiplantibacillus plantarum (isolates:1224; rSTs:462 tree)
          • Lactiplantibacillus songbeiensis (isolates:1; rSTs:1)
          • Lactiplantibacillus sp. (isolates:7; rSTs:6 tree)
          • Lactiplantibacillus xiangfangensis (isolates:1; rSTs:1)
        • Lactobacillus (isolates:2241; rSTs:1107 tree)
          • Lactobacillus acetotolerans (isolates:8; rSTs:6 tree)
          • Lactobacillus acidophilus (isolates:142; rSTs:24 tree)
          • Lactobacillus agrestimuris (isolates:1; rSTs:1)
          • Lactobacillus amylolyticus (isolates:7; rSTs:4 tree)
          • Lactobacillus amylovorus (isolates:62; rSTs:55 tree)
          • Lactobacillus apis (isolates:7; rSTs:6 tree)
          • Lactobacillus bombicola (isolates:5; rSTs:4 tree)
          • Lactobacillus colini (isolates:1; rSTs:1)
          • Lactobacillus corticis (isolates:1; rSTs:1)
          • Lactobacillus crispatus (isolates:485; rSTs:179 tree)
          • Lactobacillus delbrueckii (isolates:486; rSTs:289 tree)
          • Lactobacillus equicursoris (isolates:4; rSTs:3 tree)
          • Lactobacillus gallinarum (isolates:14; rSTs:11 tree)
          • Lactobacillus gasseri (isolates:220; rSTs:54 tree)
          • Lactobacillus gigeriorum (isolates:2; rSTs:1)
          • Lactobacillus hamsteri (isolates:3; rSTs:1)
          • Lactobacillus helsingborgensis (isolates:6; rSTs:5 tree)
          • Lactobacillus helveticus (isolates:208; rSTs:119 tree)
          • Lactobacillus hominis (isolates:4; rSTs:2)
          • Lactobacillus huangpiensis (isolates:2; rSTs:2)
          • Lactobacillus iners (isolates:87; rSTs:50 tree)
          • Lactobacillus intestinalis (isolates:11; rSTs:6 tree)
          • Lactobacillus isalae (isolates:1; rSTs:1)
          • Lactobacillus jensenii (isolates:105; rSTs:46 tree)
          • Lactobacillus johnsonii (isolates:87; rSTs:64 tree)
          • Lactobacillus juensis (isolates:2; rSTs:2)
          • Lactobacillus kalixensis (isolates:1; rSTs:1)
          • Lactobacillus kefiranofaciens (isolates:18; rSTs:9 tree)
          • Lactobacillus kimbladii (isolates:1; rSTs:1)
          • Lactobacillus kitasatonis (isolates:3; rSTs:2)
          • Lactobacillus kullabergensis (isolates:3; rSTs:3 tree)
          • Lactobacillus laiwuensis (isolates:1; rSTs:1)
          • Lactobacillus melliventris (isolates:4; rSTs:4 tree)
          • Lactobacillus mulieris (isolates:53; rSTs:21 tree)
          • Lactobacillus nasalidis (isolates:3; rSTs:1)
          • Lactobacillus panisapium (isolates:6; rSTs:6 tree)
          • Lactobacillus paragasseri (isolates:68; rSTs:44 tree)
          • Lactobacillus pasteurii (isolates:3; rSTs:1)
          • Lactobacillus porci (isolates:1; rSTs:1)
          • Lactobacillus psittaci (isolates:3; rSTs:1)
          • Lactobacillus rizhaonensis (isolates:2; rSTs:1)
          • Lactobacillus rodentium (isolates:2; rSTs:1)
          • Lactobacillus selangorensis (isolates:2; rSTs:1)
          • Lactobacillus sp. (isolates:68; rSTs:55 tree)
          • Lactobacillus taiwanensis (isolates:30; rSTs:10 tree)
          • Lactobacillus terrae (isolates:1; rSTs:1)
          • Lactobacillus ultunensis (isolates:4; rSTs:2)
          • Lactobacillus xujianguonis (isolates:2; rSTs:2)
          • Lactobacillus xylocopicola (isolates:1; rSTs:1)
        • Lapidilactobacillus (isolates:11; rSTs:9 tree)
          • Lapidilactobacillus achengensis (isolates:1; rSTs:1)
          • Lapidilactobacillus bayanensis (isolates:1; rSTs:1)
          • Lapidilactobacillus concavus (isolates:2; rSTs:1)
          • Lapidilactobacillus dextrinicus (isolates:3; rSTs:2)
          • Lapidilactobacillus gannanensis (isolates:1; rSTs:1)
          • Lapidilactobacillus luobeiensis (isolates:1; rSTs:1)
          • Lapidilactobacillus mulanensis (isolates:1; rSTs:1)
          • Lapidilactobacillus wuchangensis (isolates:1; rSTs:1)
        • Latilactobacillus (isolates:194; rSTs:131 tree)
          • Latilactobacillus curvatus (isolates:83; rSTs:60 tree)
          • Latilactobacillus fragifolii (isolates:2; rSTs:1)
          • Latilactobacillus fuchuensis (isolates:4; rSTs:2)
          • Latilactobacillus graminis (isolates:2; rSTs:1)
          • Latilactobacillus sakei (isolates:103; rSTs:67 tree)
        • Lentilactobacillus (isolates:163; rSTs:85 tree)
          • Lentilactobacillus buchneri (isolates:48; rSTs:24 tree)
          • Lentilactobacillus curieae (isolates:1; rSTs:1)
          • Lentilactobacillus dabitei (isolates:2; rSTs:1)
          • Lentilactobacillus diolivorans (isolates:3; rSTs:1)
          • Lentilactobacillus farraginis (isolates:2; rSTs:2)
          • Lentilactobacillus fungorum (isolates:1; rSTs:1)
          • Lentilactobacillus hilgardii (isolates:16; rSTs:10 tree)
          • Lentilactobacillus kefiri (isolates:17; rSTs:6 tree)
          • Lentilactobacillus kisonensis (isolates:2; rSTs:2)
          • Lentilactobacillus kosonis (isolates:1; rSTs:1)
          • Lentilactobacillus kribbianus (isolates:1; rSTs:1)
          • Lentilactobacillus laojiaonis (isolates:1; rSTs:1)
          • Lentilactobacillus otakiensis (isolates:6; rSTs:3 tree)
          • Lentilactobacillus parabuchneri (isolates:42; rSTs:18 tree)
          • Lentilactobacillus parafarraginis (isolates:5; rSTs:3 tree)
          • Lentilactobacillus parakefiri (isolates:4; rSTs:2)
          • Lentilactobacillus raoultii (isolates:1; rSTs:1)
          • Lentilactobacillus rapi (isolates:2; rSTs:1)
          • Lentilactobacillus senioris (isolates:3; rSTs:1)
          • Lentilactobacillus sp. (isolates:3; rSTs:3 tree)
          • Lentilactobacillus sunkii (isolates:2; rSTs:2)
        • Leuconostoc (isolates:496; rSTs:363 tree)
          • Leuconostoc carnosum (isolates:22; rSTs:16 tree)
          • Leuconostoc citreum (isolates:65; rSTs:54 tree)
          • Leuconostoc falkenbergense (isolates:20; rSTs:18 tree)
          • Leuconostoc fallax (isolates:5; rSTs:2)
          • Leuconostoc garlicum (isolates:1; rSTs:1)
          • Leuconostoc gasicomitatum (isolates:33; rSTs:23 tree)
          • Leuconostoc gelidum (isolates:20; rSTs:12 tree)
          • Leuconostoc holzapfelii (isolates:3; rSTs:2)
          • Leuconostoc inhae (isolates:1; rSTs:1)
          • Leuconostoc kimchii (isolates:2; rSTs:2)
          • Leuconostoc lactis (isolates:14; rSTs:11 tree)
          • Leuconostoc litchii (isolates:2; rSTs:1)
          • Leuconostoc mesenteroides (isolates:250; rSTs:165 tree)
          • Leuconostoc miyukkimchii (isolates:1; rSTs:1)
          • Leuconostoc palmae (isolates:1; rSTs:1)
          • Leuconostoc pseudomesenteroides (isolates:18; rSTs:14 tree)
          • Leuconostoc rapi (isolates:2; rSTs:1)
          • Leuconostoc sp. (isolates:8; rSTs:18 tree)
          • Leuconostoc suionicum (isolates:28; rSTs:20 tree)
        • Levilactobacillus (isolates:218; rSTs:145 tree)
          • Levilactobacillus acidifarinae (isolates:2; rSTs:1)
          • Levilactobacillus andaensis (isolates:1; rSTs:1)
          • Levilactobacillus angrenensis (isolates:1; rSTs:1)
          • Levilactobacillus brevis (isolates:162; rSTs:102 tree)
          • Levilactobacillus cerevisiae (isolates:2; rSTs:2)
          • Levilactobacillus enshiensis (isolates:1; rSTs:1)
          • Levilactobacillus fujinensis (isolates:1; rSTs:1)
          • Levilactobacillus fuyuanensis (isolates:1; rSTs:1)
          • Levilactobacillus hammesii (isolates:1; rSTs:1)
          • Levilactobacillus huananensis (isolates:1; rSTs:1)
          • Levilactobacillus humaensis (isolates:1; rSTs:1)
          • Levilactobacillus koreensis (isolates:2; rSTs:1)
          • Levilactobacillus lanxiensis (isolates:1; rSTs:1)
          • Levilactobacillus lindianensis (isolates:1; rSTs:1)
          • Levilactobacillus mulengensis (isolates:1; rSTs:1)
          • Levilactobacillus namurensis (isolates:7; rSTs:4 tree)
          • Levilactobacillus parabrevis (isolates:6; rSTs:3 tree)
          • Levilactobacillus paucivorans (isolates:1; rSTs:1)
          • Levilactobacillus senmaizukei (isolates:2; rSTs:1)
          • Levilactobacillus sp. (isolates:4; rSTs:3 tree)
          • Levilactobacillus spicheri (isolates:3; rSTs:2)
          • Levilactobacillus suantsaii (isolates:2; rSTs:2)
          • Levilactobacillus suantsaiihabitans (isolates:1; rSTs:1)
          • Levilactobacillus tangyuanensis (isolates:1; rSTs:1)
          • Levilactobacillus tongjiangensis (isolates:1; rSTs:1)
          • Levilactobacillus tujiorum (isolates:2; rSTs:2)
          • Levilactobacillus wangkuiensis (isolates:2; rSTs:2)
          • Levilactobacillus yiduensis (isolates:1; rSTs:1)
          • Levilactobacillus yonginensis (isolates:2; rSTs:2)
          • Levilactobacillus zymae (isolates:4; rSTs:2)
        • Ligilactobacillus (isolates:562; rSTs:335 tree)
          • Ligilactobacillus acidipiscis (isolates:10; rSTs:5 tree)
          • Ligilactobacillus agilis (isolates:39; rSTs:23 tree)
          • Ligilactobacillus animalis (isolates:17; rSTs:12 tree)
          • Ligilactobacillus apodemi (isolates:3; rSTs:2)
          • Ligilactobacillus araffinosus (isolates:1; rSTs:1)
          • Ligilactobacillus aviarius (isolates:30; rSTs:16 tree)
          • Ligilactobacillus ceti (isolates:3; rSTs:1)
          • Ligilactobacillus cholophilus (isolates:1; rSTs:1)
          • Ligilactobacillus equi (isolates:5; rSTs:4 tree)
          • Ligilactobacillus faecis (isolates:1; rSTs:1)
          • Ligilactobacillus hayakitensis (isolates:2; rSTs:1)
          • Ligilactobacillus hohenheimensis (isolates:2; rSTs:2)
          • Ligilactobacillus murinus (isolates:65; rSTs:23 tree)
          • Ligilactobacillus pabuli (isolates:1; rSTs:1)
          • Ligilactobacillus pobuzihii (isolates:6; rSTs:2)
          • Ligilactobacillus ruminis (isolates:72; rSTs:34 tree)
          • Ligilactobacillus saerimneri (isolates:10; rSTs:9 tree)
          • Ligilactobacillus salitolerans (isolates:1; rSTs:1)
          • Ligilactobacillus salivarius (isolates:288; rSTs:192 tree)
          • Ligilactobacillus sp. (isolates:4; rSTs:3 tree)
          • Ligilactobacillus ubinensis (isolates:1; rSTs:1)
        • Limosilactobacillus (isolates:877; rSTs:539 tree)
          • Limosilactobacillus agrestimuris (isolates:1; rSTs:1)
          • Limosilactobacillus agrestis (isolates:6; rSTs:5 tree)
          • Limosilactobacillus albertensis (isolates:5; rSTs:2)
          • Limosilactobacillus alvi (isolates:1; rSTs:1)
          • Limosilactobacillus antri (isolates:7; rSTs:4 tree)
          • Limosilactobacillus avistercoris (isolates:1; rSTs:1)
          • Limosilactobacillus avium (isolates:1)
          • Limosilactobacillus balticus (isolates:5; rSTs:4 tree)
          • Limosilactobacillus caccae (isolates:1; rSTs:1)
          • Limosilactobacillus caecicola (isolates:1; rSTs:1)
          • Limosilactobacillus caviae (isolates:2; rSTs:2)
          • Limosilactobacillus coleohominis (isolates:4; rSTs:3 tree)
          • Limosilactobacillus difficilis (isolates:1; rSTs:1)
          • Limosilactobacillus equigenerosi (isolates:3; rSTs:1)
          • Limosilactobacillus fastidiosus (isolates:6; rSTs:2)
          • Limosilactobacillus fermentum (isolates:250; rSTs:178 tree)
          • Limosilactobacillus frumenti (isolates:3; rSTs:2)
          • Limosilactobacillus galli (isolates:1; rSTs:1)
          • Limosilactobacillus gastricus (isolates:10; rSTs:3 tree)
          • Limosilactobacillus gorillae (isolates:1; rSTs:1)
          • Limosilactobacillus ingluviei (isolates:9; rSTs:7 tree)
          • Limosilactobacillus kribbianus (isolates:1; rSTs:1)
          • Limosilactobacillus mucosae (isolates:34; rSTs:25 tree)
          • Limosilactobacillus oris (isolates:24; rSTs:18 tree)
          • Limosilactobacillus panis (isolates:3; rSTs:3 tree)
          • Limosilactobacillus pontis (isolates:27; rSTs:8 tree)
          • Limosilactobacillus portuensis (isolates:5; rSTs:5 tree)
          • Limosilactobacillus pulli (isolates:2; rSTs:2)
          • Limosilactobacillus reuteri (isolates:398; rSTs:207 tree)
          • Limosilactobacillus rudii (isolates:3; rSTs:1)
          • Limosilactobacillus secaliphilus (isolates:1; rSTs:1)
          • Limosilactobacillus sp. (isolates:8; rSTs:13 tree)
          • Limosilactobacillus urinaemulieris (isolates:2; rSTs:2)
          • Limosilactobacillus vaginalis (isolates:47; rSTs:29 tree)
          • Limosilactobacillus viscerum (isolates:1; rSTs:1)
          • Limosilactobacillus walteri (isolates:1; rSTs:1)
          • [Lactobacillus] timonensis (isolates:1; rSTs:1)
        • Liquorilactobacillus (isolates:41; rSTs:27 tree)
          • Liquorilactobacillus aquaticus (isolates:1; rSTs:1)
          • Liquorilactobacillus cacaonum (isolates:1; rSTs:1)
          • Liquorilactobacillus capillatus (isolates:1; rSTs:1)
          • Liquorilactobacillus ghanensis (isolates:1; rSTs:1)
          • Liquorilactobacillus hordei (isolates:4; rSTs:3 tree)
          • Liquorilactobacillus mali (isolates:8; rSTs:4 tree)
          • Liquorilactobacillus nagelii (isolates:7; rSTs:3 tree)
          • Liquorilactobacillus oeni (isolates:1; rSTs:1)
          • Liquorilactobacillus satsumensis (isolates:8; rSTs:6 tree)
          • Liquorilactobacillus sicerae (isolates:1; rSTs:1)
          • Liquorilactobacillus sucicola (isolates:2; rSTs:1)
          • Liquorilactobacillus uvarum (isolates:3; rSTs:2)
          • Liquorilactobacillus vini (isolates:3; rSTs:2)
        • Loigolactobacillus (isolates:32; rSTs:21 tree)
          • Loigolactobacillus backii (isolates:11; rSTs:7 tree)
          • Loigolactobacillus bifermentans (isolates:2; rSTs:1)
          • Loigolactobacillus binensis (isolates:1; rSTs:1)
          • Loigolactobacillus coryniformis (isolates:14; rSTs:8 tree)
          • Loigolactobacillus iwatensis (isolates:1; rSTs:1)
          • Loigolactobacillus jiayinensis (isolates:1; rSTs:1)
          • Loigolactobacillus rennini (isolates:1; rSTs:1)
          • Loigolactobacillus zhaoyuanensis (isolates:1; rSTs:1)
        • Nicoliella (isolates:2; rSTs:2)
          • Nicoliella sp. (isolates:1; rSTs:1)
          • Nicoliella spurrieriana (isolates:1; rSTs:1)
        • Oenococcus (isolates:257; rSTs:104 tree)
          • Oenococcus alcoholitolerans (isolates:1)
          • Oenococcus kitaharae (isolates:6; rSTs:2)
          • Oenococcus oeni (isolates:247; rSTs:99 tree)
          • Oenococcus sicerae (isolates:2; rSTs:2)
          • Oenococcus sp. (isolates:1; rSTs:1)
        • Paucilactobacillus (isolates:12; rSTs:8 tree)
          • Paucilactobacillus hokkaidonensis (isolates:2; rSTs:1)
          • Paucilactobacillus kaifaensis (isolates:1)
          • Paucilactobacillus nenjiangensis (isolates:2; rSTs:2)
          • Paucilactobacillus oligofermentans (isolates:2; rSTs:2)
          • Paucilactobacillus suebicus (isolates:3; rSTs:1)
          • Paucilactobacillus vaccinostercus (isolates:1; rSTs:1)
          • Paucilactobacillus wasatchensis (isolates:1; rSTs:1)
        • Pediococcus (isolates:500; rSTs:249 tree)
          • Pediococcus acidilactici (isolates:283; rSTs:94 tree)
          • Pediococcus argentinicus (isolates:4; rSTs:2)
          • Pediococcus cellicola (isolates:2; rSTs:1)
          • Pediococcus claussenii (isolates:4; rSTs:1)
          • Pediococcus damnosus (isolates:13; rSTs:13 tree)
          • Pediococcus ethanolidurans (isolates:13; rSTs:11 tree)
          • Pediococcus inopinatus (isolates:7; rSTs:6 tree)
          • Pediococcus parvulus (isolates:12; rSTs:10 tree)
          • Pediococcus pentosaceus (isolates:157; rSTs:108 tree)
          • Pediococcus sp. (isolates:3; rSTs:1)
          • Pediococcus stilesii (isolates:2; rSTs:2)
        • Periweissella (isolates:10; rSTs:6 tree)
          • Periweissella beninensis (isolates:3; rSTs:2)
          • Periweissella cryptocerci (isolates:1; rSTs:1)
          • Periweissella fabalis (isolates:2; rSTs:1)
          • Periweissella fabaria (isolates:2; rSTs:1)
          • Periweissella ghanensis (isolates:2; rSTs:1)
        • Philodulcilactobacillus (isolates:1; rSTs:1)
          • Philodulcilactobacillus myokoensis (isolates:1; rSTs:1)
        • Schleiferilactobacillus (isolates:16; rSTs:11 tree)
          • Schleiferilactobacillus harbinensis (isolates:14; rSTs:9 tree)
          • Schleiferilactobacillus perolens (isolates:1; rSTs:1)
          • Schleiferilactobacillus shenzhenensis (isolates:1; rSTs:1)
        • Secundilactobacillus (isolates:36; rSTs:24 tree)
          • Secundilactobacillus angelensis (isolates:2; rSTs:1)
          • Secundilactobacillus collinoides (isolates:2; rSTs:2)
          • Secundilactobacillus folii (isolates:1; rSTs:1)
          • Secundilactobacillus hailunensis (isolates:1; rSTs:1)
          • Secundilactobacillus kimchicus (isolates:7; rSTs:4 tree)
          • Secundilactobacillus malefermentans (isolates:4; rSTs:2)
          • Secundilactobacillus mixtipabuli (isolates:1; rSTs:1)
          • Secundilactobacillus odoratitofui (isolates:1; rSTs:1)
          • Secundilactobacillus oryzae (isolates:2; rSTs:1)
          • Secundilactobacillus paracollinoides (isolates:5; rSTs:4 tree)
          • Secundilactobacillus pentosiphilus (isolates:2; rSTs:2)
          • Secundilactobacillus silagei (isolates:3; rSTs:1)
          • Secundilactobacillus silagincola (isolates:1; rSTs:1)
          • Secundilactobacillus similis (isolates:3; rSTs:1)
          • Secundilactobacillus yichangensis (isolates:1; rSTs:1)
        • Weissella (isolates:334; rSTs:221 tree)
          • Weissella bombi (isolates:2; rSTs:1)
          • Weissella ceti (isolates:2; rSTs:1)
          • Weissella cibaria (isolates:101; rSTs:62 tree)
          • Weissella coleopterorum (isolates:1; rSTs:1)
          • Weissella confusa (isolates:122; rSTs:93 tree)
          • Weissella diestrammenae (isolates:3; rSTs:1)
          • Weissella fangxianensis (isolates:3; rSTs:1)
          • Weissella halotolerans (isolates:3; rSTs:1)
          • Weissella hellenica (isolates:4; rSTs:1)
          • Weissella jogaejeotgali (isolates:1; rSTs:1)
          • Weissella kandleri (isolates:1; rSTs:1)
          • Weissella koreensis (isolates:7; rSTs:5 tree)
          • Weissella minor (isolates:2; rSTs:2)
          • Weissella muntiaci (isolates:1; rSTs:1)
          • Weissella oryzae (isolates:1; rSTs:1)
          • Weissella paramesenteroides (isolates:46; rSTs:18 tree)
          • Weissella sagaensis (isolates:4; rSTs:4 tree)
          • Weissella soli (isolates:7; rSTs:4 tree)
          • Weissella sp. (isolates:3; rSTs:7 tree)
          • Weissella thailandensis (isolates:4; rSTs:2)
          • Weissella tructae (isolates:2; rSTs:2)
          • Weissella uvarum (isolates:2; rSTs:1)
          • Weissella viridescens (isolates:12; rSTs:10 tree)
        • Xylocopilactobacillus (isolates:2; rSTs:2)
          • Xylocopilactobacillus apicola (isolates:1; rSTs:1)
          • Xylocopilactobacillus apis (isolates:1; rSTs:1)
      • Streptococcaceae (isolates:82455; rSTs:29353)
        • Floricoccus (isolates:3; rSTs:3 tree)
          • Floricoccus penangensis (isolates:2; rSTs:2)
          • Floricoccus tropicus (isolates:1; rSTs:1)
        • Lactococcus (isolates:1034; rSTs:587 tree)
          • Lactococcus allomyrinae (isolates:1; rSTs:1)
          • Lactococcus carnosus (isolates:15; rSTs:12 tree)
          • Lactococcus chungangensis (isolates:2; rSTs:1)
          • Lactococcus cremoris (isolates:162; rSTs:70 tree)
          • Lactococcus formosensis (isolates:61; rSTs:31 tree)
          • Lactococcus fujiensis (isolates:1; rSTs:1)
          • Lactococcus garvieae (isolates:72; rSTs:47 tree)
          • Lactococcus hircilactis (isolates:1; rSTs:1)
          • Lactococcus hodotermopsidis (isolates:1; rSTs:1)
          • Lactococcus ileimucosae (isolates:1; rSTs:1)
          • Lactococcus insecticola (isolates:1; rSTs:1)
          • Lactococcus lactis (isolates:474; rSTs:278 tree)
          • Lactococcus laudensis (isolates:8; rSTs:6 tree)
          • Lactococcus muris (isolates:1; rSTs:1)
          • Lactococcus nasutitermitis (isolates:1; rSTs:1)
          • Lactococcus paracarnosus (isolates:5; rSTs:4 tree)
          • Lactococcus petauri (isolates:178; rSTs:77 tree)
          • Lactococcus piscium (isolates:1; rSTs:1)
          • Lactococcus plantarum (isolates:2; rSTs:1)
          • Lactococcus protaetiae (isolates:1; rSTs:1)
          • Lactococcus raffinolactis (isolates:16; rSTs:12 tree)
          • Lactococcus reticulitermitis (isolates:1; rSTs:1)
          • Lactococcus sp. (isolates:24; rSTs:33 tree)
          • Lactococcus taiwanensis (isolates:3; rSTs:3 tree)
          • Lactococcus termiticola (isolates:1; rSTs:1)
        • Lactovum (isolates:1; rSTs:1)
          • Lactovum miscens (isolates:1; rSTs:1)
        • Streptococcus (isolates:81417; rSTs:28762)
          • Streptococcus acidominimus (isolates:6; rSTs:3 tree)
          • Streptococcus agalactiae (isolates:13297; rSTs:3500)
          • Streptococcus alactolyticus (isolates:7; rSTs:10 tree)
          • Streptococcus anginosus (isolates:73; rSTs:44 tree)
          • Streptococcus australis (isolates:5; rSTs:6 tree)
          • Streptococcus azizii (isolates:3; rSTs:1)
          • Streptococcus bovimastitidis (isolates:1; rSTs:1)
          • Streptococcus caballi (isolates:1; rSTs:1)
          • Streptococcus canis (isolates:55; rSTs:32 tree)
          • Streptococcus castoreus (isolates:1; rSTs:1)
          • Streptococcus catagoni (isolates:3; rSTs:1)
          • Streptococcus chenjunshii (isolates:3; rSTs:1)
          • Streptococcus constellatus (isolates:32; rSTs:22 tree)
          • Streptococcus criceti (isolates:3; rSTs:1)
          • Streptococcus cristatus (isolates:35; rSTs:29 tree)
          • Streptococcus cuniculi (isolates:3; rSTs:2)
          • Streptococcus cuniculipharyngis (isolates:1; rSTs:1)
          • Streptococcus danieliae (isolates:6; rSTs:4 tree)
          • Streptococcus devriesei (isolates:1; rSTs:1)
          • Streptococcus didelphis (isolates:3; rSTs:1)
          • Streptococcus downei (isolates:2; rSTs:2)
          • Streptococcus downii (isolates:1; rSTs:1)
          • Streptococcus dysgalactiae (isolates:307; rSTs:272 tree)
          • Streptococcus entericus (isolates:1; rSTs:1)
          • Streptococcus equi (isolates:639; rSTs:176 tree)
          • Streptococcus equinus (isolates:35; rSTs:30 tree)
          • Streptococcus ferus (isolates:2; rSTs:1)
          • Streptococcus gallinaceus (isolates:3; rSTs:3 tree)
          • Streptococcus gallolyticus (isolates:46; rSTs:58 tree)
          • Streptococcus gordonii (isolates:99; rSTs:86 tree)
          • Streptococcus halichoeri (isolates:21; rSTs:12 tree)
          • Streptococcus halotolerans (isolates:1; rSTs:1)
          • Streptococcus henryi (isolates:2; rSTs:2)
          • Streptococcus hillyeri (isolates:1; rSTs:1)
          • Streptococcus himalayensis (isolates:2; rSTs:1)
          • Streptococcus hohhotensis (isolates:1; rSTs:1)
          • Streptococcus hominis (isolates:1; rSTs:1)
          • Streptococcus humanilactis (isolates:2; rSTs:1)
          • Streptococcus hyointestinalis (isolates:2; rSTs:1)
          • Streptococcus hyovaginalis (isolates:3; rSTs:3 tree)
          • Streptococcus ictaluri (isolates:2; rSTs:1)
          • Streptococcus ilei (isolates:2; rSTs:2)
          • Streptococcus infantarius (isolates:160; rSTs:126 tree)
          • Streptococcus infantis (isolates:18; rSTs:20 tree)
          • Streptococcus iniae (isolates:103; rSTs:26 tree)
          • Streptococcus intermedius (isolates:54; rSTs:61 tree)
          • Streptococcus koreensis (isolates:6; rSTs:4 tree)
          • Streptococcus lactarius (isolates:2; rSTs:2)
          • Streptococcus loxodontisalivarius (isolates:1; rSTs:1)
          • Streptococcus lutetiensis (isolates:49; rSTs:71 tree)
          • Streptococcus macacae (isolates:3; rSTs:1)
          • Streptococcus macedonicus (isolates:45; rSTs:15 tree)
          • Streptococcus marimammalium (isolates:1; rSTs:1)
          • Streptococcus marmotae (isolates:1; rSTs:1)
          • Streptococcus massiliensis (isolates:3; rSTs:2)
          • Streptococcus merionis (isolates:2; rSTs:1)
          • Streptococcus minor (isolates:2; rSTs:3 tree)
          • Streptococcus mitis (isolates:389; rSTs:353 tree)
          • Streptococcus moroccensis (isolates:1; rSTs:1)
          • Streptococcus mutans (isolates:589; rSTs:377 tree)
          • Streptococcus oralis (isolates:220; rSTs:220 tree)
          • Streptococcus oricebi (isolates:1; rSTs:1)
          • Streptococcus orisasini (isolates:1; rSTs:1)
          • Streptococcus oriscaviae (isolates:1; rSTs:1)
          • Streptococcus orisratti (isolates:1; rSTs:1)
          • Streptococcus ovis (isolates:1; rSTs:1)
          • Streptococcus ovuberis (isolates:1; rSTs:1)
          • Streptococcus pacificus (isolates:1; rSTs:1)
          • Streptococcus panodentis (isolates:1; rSTs:1)
          • Streptococcus pantholopis (isolates:1; rSTs:1)
          • Streptococcus parapneumoniae (isolates:1; rSTs:1)
          • Streptococcus parasanguinis (isolates:129; rSTs:116 tree)
          • Streptococcus parasuis (isolates:18; rSTs:16 tree)
          • Streptococcus parauberis (isolates:34; rSTs:18 tree)
          • Streptococcus pasteurianus (isolates:42; rSTs:47 tree)
          • Streptococcus penaeicida (isolates:1; rSTs:1)
          • Streptococcus periodonticum (isolates:2; rSTs:4 tree)
          • Streptococcus peroris (isolates:1; rSTs:1)
          • Streptococcus phocae (isolates:2; rSTs:2)
          • Streptococcus pluranimalium (isolates:7; rSTs:8 tree)
          • Streptococcus plurextorum (isolates:1; rSTs:1)
          • Streptococcus pneumoniae (isolates:55309; rSTs:19006)
          • Streptococcus porci (isolates:1; rSTs:1)
          • Streptococcus porcinus (isolates:10; rSTs:6 tree)
          • Streptococcus porcorum (isolates:1; rSTs:1)
          • Streptococcus pseudopneumoniae (isolates:99; rSTs:125 tree)
          • Streptococcus pseudoporcinus (isolates:11; rSTs:5 tree)
          • Streptococcus pyogenes (isolates:4609; rSTs:1433)
          • Streptococcus raffinosi (isolates:3; rSTs:3 tree)
          • Streptococcus ratti (isolates:4; rSTs:3 tree)
          • Streptococcus respiraculi (isolates:1; rSTs:1)
          • Streptococcus rubneri (isolates:4; rSTs:3 tree)
          • Streptococcus ruminantium (isolates:38; rSTs:28 tree)
          • Streptococcus ruminicola (isolates:4; rSTs:4 tree)
          • Streptococcus rupicaprae (isolates:1; rSTs:1)
          • Streptococcus salivarius (isolates:234; rSTs:160 tree)
          • Streptococcus saliviloxodontae (isolates:1; rSTs:1)
          • Streptococcus sanguinis (isolates:107; rSTs:109 tree)
          • Streptococcus sciuri (isolates:1; rSTs:1)
          • Streptococcus shenyangsis (isolates:1; rSTs:1)
          • Streptococcus sinensis (isolates:4; rSTs:3 tree)
          • Streptococcus sobrinus (isolates:52; rSTs:16 tree)
          • Streptococcus sp. (isolates:368; rSTs:497 tree)
          • Streptococcus suis (isolates:3261; rSTs:1181 tree)
          • Streptococcus taonis (isolates:1; rSTs:1)
          • Streptococcus thalassemiae (isolates:1; rSTs:1)
          • Streptococcus thermophilus (isolates:510; rSTs:216 tree)
          • Streptococcus thoraltensis (isolates:2; rSTs:2)
          • Streptococcus timonensis (isolates:2; rSTs:1)
          • Streptococcus troglodytae (isolates:1; rSTs:1)
          • Streptococcus uberis (isolates:128; rSTs:93 tree)
          • Streptococcus urinalis (isolates:5; rSTs:1)
          • Streptococcus vaginalis (isolates:1; rSTs:1)
          • Streptococcus varani (isolates:1; rSTs:1)
          • Streptococcus vestibularis (isolates:23; rSTs:13 tree)
          • Streptococcus vicugnae (isolates:2; rSTs:1)
          • Streptococcus xiaochunlingii (isolates:4; rSTs:10 tree)
          • Streptococcus zalophi (isolates:2; rSTs:2)
  • Clostridia (isolates:27376; rSTs:5367)
    • Caldicoprobacterales (isolates:4; rSTs:4)
      • Caldicoprobacteraceae (isolates:3; rSTs:3)
        • Caldicoprobacter (isolates:3; rSTs:3)
          • Caldicoprobacter algeriensis (isolates:1; rSTs:1)
          • Caldicoprobacter faecalis (isolates:1; rSTs:1)
          • Caldicoprobacter guelmensis (isolates:1; rSTs:1)
      • Xylanivirgaceae (isolates:1; rSTs:1)
        • Xylanivirga (isolates:1; rSTs:1)
          • Xylanivirga thermophila (isolates:1; rSTs:1)
    • Christensenellales (isolates:22; rSTs:14 tree)
      • Christensenellaceae (isolates:22; rSTs:14 tree)
        • Candidatus Borkfalkia (isolates:1; rSTs:1)
          • Candidatus Borkfalkia ceftriaxoniphila (isolates:1; rSTs:1)
        • Christensenella (isolates:18; rSTs:10 tree)
          • Christensenella hongkongensis (isolates:3; rSTs:1)
          • Christensenella intestinihominis (isolates:2; rSTs:1)
          • Christensenella massiliensis (isolates:2; rSTs:2)
          • Christensenella minuta (isolates:8; rSTs:4 tree)
          • Christensenella tenuis (isolates:1; rSTs:1)
          • Christensenella timonensis (isolates:2; rSTs:1)
        • Gehongia (isolates:1; rSTs:1)
          • Gehongia tenuis (isolates:1; rSTs:1)
        • Guopingia (isolates:1; rSTs:1)
          • Guopingia tenuis (isolates:1; rSTs:1)
        • Luoshenia (isolates:1; rSTs:1)
          • Luoshenia tenuis (isolates:1; rSTs:1)
    • Eubacteriales (isolates:4929; rSTs:2237)
      • Acutalibacteraceae (isolates:31; rSTs:26 tree)
        • Acutalibacter (isolates:10; rSTs:8 tree)
          • Acutalibacter caecimuris (isolates:1; rSTs:1)
          • Acutalibacter intestini (isolates:1; rSTs:1)
          • Acutalibacter muris (isolates:5; rSTs:3 tree)
          • Acutalibacter sp. (isolates:3; rSTs:3 tree)
        • Anaeromassilibacillus (isolates:8; rSTs:6 tree)
          • Anaeromassilibacillus senegalensis (isolates:1; rSTs:1)
          • Anaeromassilibacillus sp. (isolates:7; rSTs:5 tree)
        • Caproicibacter (isolates:3; rSTs:3 tree)
          • Caproicibacter fermentans (isolates:2; rSTs:2)
          • Caproicibacter sp. (isolates:1; rSTs:1)
        • Caproiciproducens (isolates:5; rSTs:4 tree)
          • Caproiciproducens faecalis (isolates:1; rSTs:1)
          • Caproiciproducens galactitolivorans (isolates:2; rSTs:2)
          • Caproiciproducens sp. (isolates:2; rSTs:1)
        • Hydrogeniiclostridium (isolates:2; rSTs:2)
          • Hydrogeniiclostridium mannosilyticum (isolates:2; rSTs:2)
        • Pseudoruminococcus (isolates:3; rSTs:3 tree)
          • Candidatus Pseudoruminococcus merdavium (isolates:1; rSTs:1)
          • Pseudoruminococcus massiliensis (isolates:2; rSTs:2)
      • Aristaeellaceae (isolates:4; rSTs:2)
        • Aristaeella (isolates:4; rSTs:2)
          • Aristaeella hokkaidonensis (isolates:2; rSTs:1)
          • Aristaeella lactis (isolates:2; rSTs:1)
      • Beduinellaceae (isolates:1; rSTs:1)
        • Beduinella (isolates:1; rSTs:1)
          • Beduinella massiliensis (isolates:1; rSTs:1)
      • Bianqueaceae (isolates:1)
        • Bianquea (isolates:1)
          • Bianquea renquensis (isolates:1)
      • Butyricicoccaceae (isolates:42; rSTs:33 tree)
        • Agathobaculum (isolates:5; rSTs:5 tree)
          • Agathobaculum ammoniilyticum (isolates:1; rSTs:1)
          • Agathobaculum desmolans (isolates:1; rSTs:1)
          • Agathobaculum hominis (isolates:1; rSTs:1)
          • Agathobaculum sp. (isolates:2; rSTs:2)
        • Butyricicoccus (isolates:36; rSTs:27 tree)
          • Butyricicoccus faecihominis (isolates:3; rSTs:2)
          • Butyricicoccus intestinisimiae (isolates:1; rSTs:1)
          • Butyricicoccus porcorum (isolates:1; rSTs:1)
          • Butyricicoccus pullicaecorum (isolates:6; rSTs:3 tree)
          • Butyricicoccus sp. (isolates:25; rSTs:20 tree)
        • Intestinibacillus (isolates:1; rSTs:1)
          • Intestinibacillus massiliensis (isolates:1; rSTs:1)
      • Clostridiaceae (isolates:3908; rSTs:1411)
        • Abyssisolibacter (isolates:1; rSTs:1)
          • Abyssisolibacter fermentans (isolates:1; rSTs:1)
        • Anaeromonas (isolates:2; rSTs:2)
          • Anaeromonas frigoriresistens (isolates:1; rSTs:1)
          • Anaeromonas gelatinilytica (isolates:1; rSTs:1)
        • Anaerophilus (isolates:1; rSTs:1)
          • Anaerophilus nitritogenes (isolates:1; rSTs:1)
        • Anoxynatronum (isolates:2)
          • Anoxynatronum buryatiense (isolates:1)
          • Anoxynatronum sibiricum (isolates:1)
        • Caloramator (isolates:10; rSTs:8 tree)
          • Caloramator australicus (isolates:1; rSTs:1)
          • Caloramator fervidus (isolates:1; rSTs:1)
          • Caloramator mitchellensis (isolates:1; rSTs:1)
          • Caloramator proteoclasticus (isolates:1; rSTs:1)
          • Caloramator quimbayensis (isolates:1; rSTs:1)
          • Caloramator sp. (isolates:5; rSTs:3 tree)
        • Candidatus Arthromitus (isolates:11; rSTs:7 tree)
          • Candidatus Arthromitus sp. (isolates:11; rSTs:7 tree)
        • Clostridium (isolates:3826; rSTs:1351 tree)
          • Clostridium aceticum (isolates:2; rSTs:1)
          • Clostridium acetireducens (isolates:1; rSTs:1)
          • Clostridium acetobutylicum (isolates:18; rSTs:3 tree)
          • Clostridium acidisoli (isolates:1; rSTs:1)
          • Clostridium aciditolerans (isolates:1; rSTs:1)
          • Clostridium aestuarii (isolates:1; rSTs:1)
          • Clostridium akagii (isolates:1; rSTs:1)
          • Clostridium algidicarnis (isolates:15; rSTs:12 tree)
          • Clostridium algifaecis (isolates:1; rSTs:1)
          • Clostridium algoriphilum (isolates:1; rSTs:1)
          • Clostridium amazonitimonense (isolates:2; rSTs:1)
          • Clostridium aminobutyricum (isolates:1; rSTs:1)
          • Clostridium amylolyticum (isolates:1; rSTs:1)
          • Clostridium aquiflavi (isolates:1; rSTs:1)
          • Clostridium arbusti (isolates:1; rSTs:1)
          • Clostridium argentinense (isolates:6; rSTs:1)
          • Clostridium aromativorans (isolates:1; rSTs:1)
          • Clostridium autoethanogenum (isolates:5; rSTs:1)
          • Clostridium baratii (isolates:21; rSTs:16 tree)
          • Clostridium beijerinckii (isolates:237; rSTs:32 tree)
          • Clostridium bornimense (isolates:2; rSTs:2)
          • Clostridium botulinum (isolates:1152; rSTs:197 tree)
          • Clostridium bowmanii (isolates:2; rSTs:1)
          • Clostridium brassicae (isolates:1; rSTs:1)
          • Clostridium butyricum (isolates:179; rSTs:53 tree)
          • Clostridium cadaveris (isolates:12; rSTs:8 tree)
          • Clostridium caldaquaticum (isolates:1; rSTs:1)
          • Clostridium carboxidivorans (isolates:4; rSTs:1)
          • Clostridium carnis (isolates:1; rSTs:1)
          • Clostridium cavendishii (isolates:1; rSTs:1)
          • Clostridium celatum (isolates:7; rSTs:4 tree)
          • Clostridium cellulovorans (isolates:2; rSTs:1)
          • Clostridium chauvoei (isolates:66; rSTs:19 tree)
          • Clostridium chromiireducens (isolates:3; rSTs:3 tree)
          • Clostridium chrysemydis (isolates:1; rSTs:1)
          • Clostridium cibarium (isolates:1; rSTs:1)
          • Clostridium cochlearium (isolates:13; rSTs:12 tree)
          • Clostridium colicanis (isolates:1; rSTs:1)
          • Clostridium collagenovorans (isolates:1; rSTs:1)
          • Clostridium coskatii (isolates:2; rSTs:1)
          • Clostridium culturomicium (isolates:2; rSTs:1)
          • Clostridium cuniculi (isolates:2; rSTs:2)
          • Clostridium cylindrosporum (isolates:1; rSTs:1)
          • Clostridium disporicum (isolates:1; rSTs:1)
          • Clostridium drakei (isolates:2; rSTs:1)
          • Clostridium estertheticum (isolates:36; rSTs:19 tree)
          • Clostridium faecium (isolates:1; rSTs:1)
          • Clostridium fallax (isolates:2; rSTs:1)
          • Clostridium felsineum (isolates:5; rSTs:4 tree)
          • Clostridium fermenticellae (isolates:1; rSTs:1)
          • Clostridium fessum (isolates:14; rSTs:13 tree)
          • Clostridium folliculivorans (isolates:2; rSTs:1)
          • Clostridium formicaceticum (isolates:2; rSTs:1)
          • Clostridium frigidicarnis (isolates:1; rSTs:1)
          • Clostridium frigoriphilum (isolates:1)
          • Clostridium frigoris (isolates:1; rSTs:1)
          • Clostridium fungisolvens (isolates:1; rSTs:1)
          • Clostridium gallinarum (isolates:1; rSTs:1)
          • Clostridium ganghwense (isolates:1; rSTs:1)
          • Clostridium gasigenes (isolates:10; rSTs:9 tree)
          • Clostridium gelidum (isolates:1; rSTs:1)
          • Clostridium grantii (isolates:1; rSTs:1)
          • Clostridium guangxiense (isolates:1; rSTs:1)
          • Clostridium haemolyticum (isolates:5; rSTs:3 tree)
          • Clostridium hominis (isolates:1; rSTs:1)
          • Clostridium homopropionicum (isolates:2; rSTs:1)
          • Clostridium hydrogeniformans (isolates:1; rSTs:1)
          • Clostridium hydrogenum (isolates:1; rSTs:1)
          • Clostridium ihumii (isolates:2; rSTs:1)
          • Clostridium intestinale (isolates:4; rSTs:4 tree)
          • Clostridium isatidis (isolates:1; rSTs:1)
          • Clostridium kluyveri (isolates:4; rSTs:3 tree)
          • Clostridium lacusfryxellense (isolates:1; rSTs:1)
          • Clostridium lamae (isolates:1; rSTs:1)
          • Clostridium liquoris (isolates:1; rSTs:1)
          • Clostridium ljungdahlii (isolates:2; rSTs:1)
          • Clostridium lundense (isolates:1; rSTs:1)
          • Clostridium luticellarii (isolates:1; rSTs:1)
          • Clostridium magnum (isolates:2; rSTs:1)
          • Clostridium malenominatum (isolates:1; rSTs:1)
          • Clostridium manihotivorum (isolates:1; rSTs:1)
          • Clostridium massiliamazoniense (isolates:1; rSTs:1)
          • Clostridium massiliodielmoense (isolates:2; rSTs:1)
          • Clostridium mediterraneense (isolates:2; rSTs:1)
          • Clostridium merdae (isolates:2; rSTs:1)
          • Clostridium minihomine (isolates:1; rSTs:1)
          • Clostridium mobile (isolates:1; rSTs:1)
          • Clostridium moniliforme (isolates:1; rSTs:1)
          • Clostridium muellerianum (isolates:1; rSTs:1)
          • Clostridium neonatale (isolates:9; rSTs:4 tree)
          • Clostridium niameyense (isolates:3; rSTs:2)
          • Clostridium nigeriense (isolates:1; rSTs:1)
          • Clostridium novyi (isolates:6; rSTs:5 tree)
          • Clostridium oceanicum (isolates:1; rSTs:1)
          • Clostridium omnivorum (isolates:1; rSTs:1)
          • Clostridium oryzae (isolates:1; rSTs:1)
          • Clostridium paraputrificum (isolates:51; rSTs:33 tree)
          • Clostridium paridis (isolates:1; rSTs:1)
          • Clostridium pascui (isolates:1; rSTs:1)
          • Clostridium pasteurianum (isolates:8; rSTs:3 tree)
          • Clostridium peptidivorans (isolates:1; rSTs:1)
          • Clostridium perfringens (isolates:1313; rSTs:521 tree)
          • Clostridium phoceensis (isolates:3; rSTs:2)
          • Clostridium polyendosporum (isolates:1; rSTs:1)
          • Clostridium polynesiense (isolates:2; rSTs:1)
          • Clostridium porci (isolates:1; rSTs:1)
          • Clostridium prolinivorans (isolates:1; rSTs:1)
          • Clostridium psychrophilum (isolates:1; rSTs:1)
          • Clostridium punense (isolates:1; rSTs:1)
          • Clostridium puniceum (isolates:1; rSTs:1)
          • Clostridium putrefaciens (isolates:1; rSTs:1)
          • Clostridium ragsdalei (isolates:1; rSTs:1)
          • Clostridium rectalis (isolates:1; rSTs:1)
          • Clostridium rhizosphaerae (isolates:1; rSTs:1)
          • Clostridium saccharobutylicum (isolates:64; rSTs:3 tree)
          • Clostridium saccharoperbutylacetonicum (isolates:7; rSTs:2)
          • Clostridium sardiniense (isolates:3; rSTs:2)
          • Clostridium sartagoforme (isolates:2; rSTs:2)
          • Clostridium saudiense (isolates:19; rSTs:6 tree)
          • Clostridium scatologenes (isolates:1; rSTs:1)
          • Clostridium senegalense (isolates:4; rSTs:3 tree)
          • Clostridium septicum (isolates:8; rSTs:5 tree)
          • Clostridium simiarum (isolates:1; rSTs:1)
          • Clostridium sp. (isolates:137; rSTs:125 tree)
          • Clostridium sporogenes (isolates:117; rSTs:39 tree)
          • Clostridium subterminale (isolates:1; rSTs:1)
          • Clostridium sulfidigenes (isolates:1; rSTs:1)
          • Clostridium swellfunianum (isolates:1; rSTs:1)
          • Clostridium taeniosporum (isolates:1; rSTs:1)
          • Clostridium tagluense (isolates:13; rSTs:5 tree)
          • Clostridium tanneri (isolates:1; rSTs:1)
          • Clostridium tarantellae (isolates:1; rSTs:1)
          • Clostridium tepidiprofundi (isolates:1; rSTs:1)
          • Clostridium tepidum (isolates:4; rSTs:1)
          • Clostridium tertium (isolates:9; rSTs:7 tree)
          • Clostridium tetani (isolates:57; rSTs:29 tree)
          • Clostridium tetanomorphum (isolates:6; rSTs:2)
          • Clostridium thailandense (isolates:1; rSTs:1)
          • Clostridium thermarum (isolates:3; rSTs:2)
          • Clostridium thermobutyricum (isolates:3; rSTs:3 tree)
          • Clostridium thermopalmarium (isolates:2; rSTs:1)
          • Clostridium thermosuccinogenes (isolates:5; rSTs:3 tree)
          • Clostridium transplantifaecale (isolates:1; rSTs:1)
          • Clostridium tunisiense (isolates:1)
          • Clostridium tyrobutyricum (isolates:30; rSTs:20 tree)
          • Clostridium uliginosum (isolates:1; rSTs:1)
          • Clostridium vincentii (isolates:1; rSTs:1)
          • Clostridium vitabionis (isolates:1; rSTs:1)
          • Clostridium weizhouense (isolates:1; rSTs:1)
          • Clostridium yunnanense (isolates:1; rSTs:1)
          • Clostridium zeae (isolates:1; rSTs:1)
        • Crassaminicella (isolates:3; rSTs:3 tree)
          • Crassaminicella indica (isolates:1; rSTs:1)
          • Crassaminicella profunda (isolates:1; rSTs:1)
          • Crassaminicella thermophila (isolates:1; rSTs:1)
        • Desnuesiella (isolates:1; rSTs:1)
          • Desnuesiella massiliensis (isolates:1; rSTs:1)
        • Falcatimonas (isolates:1; rSTs:1)
          • Falcatimonas sp. (isolates:1; rSTs:1)
        • Fervidicella (isolates:1; rSTs:1)
          • Fervidicella metallireducens (isolates:1; rSTs:1)
        • Fonticella (isolates:1; rSTs:1)
          • Fonticella tunisiensis (isolates:1; rSTs:1)
        • Haloimpatiens (isolates:2; rSTs:2)
          • Haloimpatiens lingqiaonensis (isolates:1; rSTs:1)
          • Haloimpatiens massiliensis (isolates:1; rSTs:1)
        • Hathewaya (isolates:5; rSTs:4 tree)
          • Hathewaya histolytica (isolates:1; rSTs:1)
          • Hathewaya limosa (isolates:2; rSTs:1)
          • Hathewaya massiliensis (isolates:1; rSTs:1)
          • Hathewaya proteolytica (isolates:1; rSTs:1)
        • Inconstantimicrobium (isolates:1; rSTs:1)
          • Inconstantimicrobium porci (isolates:1; rSTs:1)
        • Lactonifactor (isolates:13; rSTs:4 tree)
          • Lactonifactor longoviformis (isolates:6; rSTs:3 tree)
          • Lactonifactor sp. (isolates:7; rSTs:1)
        • Massilioclostridium (isolates:3; rSTs:2)
          • Massilioclostridium coli (isolates:3; rSTs:2)
        • Mordavella (isolates:1; rSTs:1)
          • Mordavella massiliensis (isolates:1; rSTs:1)
        • Oceanirhabdus (isolates:2; rSTs:2)
          • Oceanirhabdus seepicola (isolates:1; rSTs:1)
          • Oceanirhabdus sp. (isolates:1; rSTs:1)
        • Oxobacter (isolates:1; rSTs:1)
          • Oxobacter pfennigii (isolates:1; rSTs:1)
        • Pilosibacter (isolates:1; rSTs:1)
          • Pilosibacter fragilis (isolates:1; rSTs:1)
        • Proteiniclasticum (isolates:5; rSTs:4 tree)
          • Proteiniclasticum aestuarii (isolates:1; rSTs:1)
          • Proteiniclasticum ruminis (isolates:3; rSTs:2)
          • Proteiniclasticum sediminis (isolates:1; rSTs:1)
        • Sarcina (isolates:8; rSTs:6 tree)
          • Sarcina sp. (isolates:1; rSTs:1)
          • Sarcina ventriculi (isolates:7; rSTs:5 tree)
        • Senegalia (isolates:2; rSTs:2)
          • Senegalia massiliensis (isolates:2; rSTs:2)
        • Thermobrachium (isolates:2; rSTs:2)
          • Thermobrachium celere (isolates:2; rSTs:2)
        • Youngiibacter (isolates:2; rSTs:2)
          • Youngiibacter fragilis (isolates:1; rSTs:1)
          • Youngiibacter multivorans (isolates:1; rSTs:1)
      • Clostridiales Family XVI. Incertae Sedis (isolates:3; rSTs:3 tree)
        • Carboxydocella (isolates:3; rSTs:3 tree)
          • Carboxydocella sp. (isolates:2; rSTs:2)
          • Carboxydocella sporoproducens (isolates:1; rSTs:1)
      • Clostridiales Family XVII. Incertae Sedis (isolates:18; rSTs:14 tree)
        • Candidatus Hydrogenisulfobacillus (isolates:1)
          • Candidatus Hydrogenisulfobacillus filiaventi (isolates:1)
        • Sulfobacillus (isolates:11; rSTs:9 tree)
          • Sulfobacillus acidophilus (isolates:1; rSTs:1)
          • Sulfobacillus harzensis (isolates:1; rSTs:1)
          • Sulfobacillus sp. (isolates:1; rSTs:1)
          • Sulfobacillus thermosulfidooxidans (isolates:7; rSTs:5 tree)
          • Sulfobacillus thermotolerans (isolates:1; rSTs:1)
        • Thermaerobacter (isolates:6; rSTs:5 tree)
          • Thermaerobacter composti (isolates:2; rSTs:1)
          • Thermaerobacter marianensis (isolates:1; rSTs:1)
          • Thermaerobacter sp. (isolates:2; rSTs:2)
          • Thermaerobacter subterraneus (isolates:1; rSTs:1)
      • Desulfallaceae (isolates:7; rSTs:7 tree)
        • Desulfallas (isolates:1; rSTs:1)
          • Desulfallas thermosapovorans (isolates:1; rSTs:1)
        • Desulfoscipio (isolates:3; rSTs:3 tree)
          • Desulfoscipio geothermicus (isolates:1; rSTs:1)
          • Desulfoscipio gibsoniae (isolates:1; rSTs:1)
          • Desulfoscipio sp. (isolates:1; rSTs:1)
        • Desulfotruncus (isolates:2; rSTs:2)
          • Desulfotruncus alcoholivorax (isolates:1; rSTs:1)
          • Desulfotruncus arcticus (isolates:1; rSTs:1)
        • Sporotomaculum (isolates:1; rSTs:1)
          • Sporotomaculum syntrophicum (isolates:1; rSTs:1)
      • Desulfitobacteriaceae (isolates:50; rSTs:42 tree)
        • Dehalobacter (isolates:11; rSTs:6 tree)
          • Dehalobacter restrictus (isolates:3; rSTs:2)
          • Dehalobacter sp. (isolates:8; rSTs:4 tree)
        • Desulfitobacterium (isolates:14; rSTs:13 tree)
          • Desulfitobacterium chlororespirans (isolates:1; rSTs:1)
          • Desulfitobacterium dehalogenans (isolates:1; rSTs:1)
          • Desulfitobacterium dichloroeliminans (isolates:1; rSTs:1)
          • Desulfitobacterium hafniense (isolates:7; rSTs:6 tree)
          • Desulfitobacterium metallireducens (isolates:1; rSTs:1)
          • Desulfitobacterium sp. (isolates:3; rSTs:3 tree)
        • Desulfosporosinus (isolates:24; rSTs:22 tree)
          • Candidatus Desulfosporosinus infrequens (isolates:1; rSTs:1)
          • Desulfosporosinus acididurans (isolates:1; rSTs:1)
          • Desulfosporosinus acidiphilus (isolates:1; rSTs:1)
          • Desulfosporosinus fructosivorans (isolates:1; rSTs:1)
          • Desulfosporosinus hippei (isolates:1; rSTs:1)
          • Desulfosporosinus lacus (isolates:1; rSTs:1)
          • Desulfosporosinus meridiei (isolates:1; rSTs:1)
          • Desulfosporosinus metallidurans (isolates:1; rSTs:1)
          • Desulfosporosinus nitroreducens (isolates:2; rSTs:2)
          • Desulfosporosinus orientis (isolates:1; rSTs:1)
          • Desulfosporosinus sp. (isolates:12; rSTs:10 tree)
          • Desulfosporosinus youngiae (isolates:1; rSTs:1)
        • Syntrophobotulus (isolates:1; rSTs:1)
          • Syntrophobotulus glycolicus (isolates:1; rSTs:1)
      • Desulfocucumaceae (isolates:1; rSTs:1)
        • Desulfocucumis (isolates:1; rSTs:1)
          • Desulfocucumis palustris (isolates:1; rSTs:1)
      • Desulfotomaculaceae (isolates:10; rSTs:8 tree)
        • Desulfotomaculum (isolates:5; rSTs:3 tree)
          • Desulfotomaculum copahuensis (isolates:1; rSTs:1)
          • Desulfotomaculum nigrificans (isolates:4; rSTs:2)
        • Pelotomaculum (isolates:5; rSTs:5 tree)
          • Pelotomaculum isophthalicicum (isolates:1; rSTs:1)
          • Pelotomaculum propionicicum (isolates:1; rSTs:1)
          • Pelotomaculum schinkii (isolates:1; rSTs:1)
          • Pelotomaculum sp. (isolates:1; rSTs:1)
          • Pelotomaculum terephthalicicum (isolates:1; rSTs:1)
      • Desulfurisporaceae (isolates:1; rSTs:1)
        • Desulfurispora (isolates:1; rSTs:1)
          • Desulfurispora thermophila (isolates:1; rSTs:1)
      • Eubacteriaceae (isolates:129; rSTs:99 tree)
        • Acetobacterium (isolates:19; rSTs:14 tree)
          • Acetobacterium bakii (isolates:4; rSTs:1)
          • Acetobacterium dehalogenans (isolates:1; rSTs:1)
          • Acetobacterium fimetarium (isolates:1; rSTs:1)
          • Acetobacterium malicum (isolates:1; rSTs:1)
          • Acetobacterium paludosum (isolates:2; rSTs:1)
          • Acetobacterium sp. (isolates:2; rSTs:2)
          • Acetobacterium tundrae (isolates:2; rSTs:1)
          • Acetobacterium wieringae (isolates:5; rSTs:5 tree)
          • Acetobacterium woodii (isolates:1; rSTs:1)
        • Alkalibacter (isolates:3; rSTs:3 tree)
          • Alkalibacter mobilis (isolates:1; rSTs:1)
          • Alkalibacter rhizosphaerae (isolates:1; rSTs:1)
          • Alkalibacter saccharofermentans (isolates:1; rSTs:1)
        • Alkalibaculum (isolates:3; rSTs:2)
          • Alkalibaculum bacchi (isolates:2; rSTs:1)
          • Alkalibaculum sporogenes (isolates:1; rSTs:1)
        • Anaerofustis (isolates:9; rSTs:6 tree)
          • Anaerofustis sp. (isolates:2; rSTs:2)
          • Anaerofustis stercorihominis (isolates:7; rSTs:4 tree)
        • Eubacterium (isolates:88; rSTs:67 tree)
          • Eubacterium aggregans (isolates:1; rSTs:1)
          • Eubacterium album (isolates:1; rSTs:1)
          • Eubacterium barkeri (isolates:1; rSTs:1)
          • Eubacterium callanderi (isolates:22; rSTs:12 tree)
          • Eubacterium coprostanoligenes (isolates:1; rSTs:1)
          • Eubacterium limosum (isolates:7; rSTs:5 tree)
          • Eubacterium maltosivorans (isolates:5; rSTs:4 tree)
          • Eubacterium oxidoreducens (isolates:1; rSTs:1)
          • Eubacterium plexicaudatum (isolates:1; rSTs:1)
          • Eubacterium pyruvativorans (isolates:3; rSTs:5 tree)
          • Eubacterium ramulus (isolates:10; rSTs:6 tree)
          • Eubacterium ruminantium (isolates:4; rSTs:2)
          • Eubacterium segne (isolates:1; rSTs:1)
          • Eubacterium sp. (isolates:10; rSTs:8 tree)
          • Eubacterium uniforme (isolates:1; rSTs:1)
          • Eubacterium ventriosum (isolates:15; rSTs:14 tree)
          • Eubacterium xylanophilum (isolates:1; rSTs:1)
          • [Eubacterium] cellulosolvens (isolates:3; rSTs:2)
        • Gallibacter (isolates:1; rSTs:1)
          • Gallibacter intestinalis (isolates:1; rSTs:1)
        • Garciella (isolates:2; rSTs:2)
          • Garciella nitratireducens (isolates:2; rSTs:2)
        • Irregularibacter (isolates:1; rSTs:1)
          • Irregularibacter muris (isolates:1; rSTs:1)
        • Pseudoramibacter (isolates:3; rSTs:3 tree)
          • Pseudoramibacter alactolyticus (isolates:1; rSTs:1)
          • Pseudoramibacter porci (isolates:1; rSTs:1)
          • Pseudoramibacter sp. (isolates:1; rSTs:1)
      • Eubacteriales Family XII. Incertae Sedis (isolates:4; rSTs:4 tree)
        • Fusibacter (isolates:4; rSTs:4 tree)
          • Fusibacter ferrireducens (isolates:1; rSTs:1)
          • Fusibacter paucivorans (isolates:1; rSTs:1)
          • Fusibacter sp. (isolates:1; rSTs:1)
          • Fusibacter tunisiensis (isolates:1; rSTs:1)
      • Eubacteriales Family XIII. Incertae Sedis (isolates:25; rSTs:19 tree)
        • Baileyella (isolates:2; rSTs:2)
          • Baileyella intestinalis (isolates:2; rSTs:2)
        • Hominibacterium (isolates:2; rSTs:2)
          • Hominibacterium faecale (isolates:2; rSTs:2)
        • Hornefia (isolates:2; rSTs:2)
          • Hornefia butyriciproducens (isolates:1; rSTs:1)
          • Hornefia porci (isolates:1; rSTs:1)
        • Lentihominibacter (isolates:2; rSTs:1)
          • Lentihominibacter faecis (isolates:1)
          • Lentihominibacter hominis (isolates:1; rSTs:1)
        • Senimuribacter (isolates:2; rSTs:2)
          • Senimuribacter intestinalis (isolates:2; rSTs:2)
        • Sinanaerobacter (isolates:1; rSTs:1)
          • Sinanaerobacter chloroacetimidivorans (isolates:1; rSTs:1)
        • Zhenpiania (isolates:1; rSTs:1)
          • Zhenpiania hominis (isolates:1; rSTs:1)
      • Feifaniaceae (isolates:1; rSTs:1)
        • Feifania (isolates:1; rSTs:1)
          • Feifania hominis (isolates:1; rSTs:1)
      • Gracilibacteraceae (isolates:1)
        • Gracilibacter (isolates:1)
          • Gracilibacter sp. (isolates:1)
      • Heliobacteriaceae (isolates:10; rSTs:8 tree)
        • Heliobacterium (isolates:2; rSTs:2)
          • Heliobacterium chlorum (isolates:1; rSTs:1)
          • Heliobacterium mobile (isolates:1; rSTs:1)
        • Heliomicrobium (isolates:4; rSTs:3 tree)
          • Heliomicrobium gestii (isolates:2; rSTs:1)
          • Heliomicrobium modesticaldum (isolates:1; rSTs:1)
          • Heliomicrobium undosum (isolates:1; rSTs:1)
        • Heliophilum (isolates:2; rSTs:1)
          • Heliophilum fasciatum (isolates:2; rSTs:1)
        • Heliorestis (isolates:2; rSTs:2)
          • Heliorestis acidaminivorans (isolates:1; rSTs:1)
          • Heliorestis convoluta (isolates:1; rSTs:1)
      • Maliibacteriaceae (isolates:1; rSTs:1)
        • Maliibacterium (isolates:1; rSTs:1)
          • Maliibacterium massiliense (isolates:1; rSTs:1)
      • Oscillospiraceae (isolates:571; rSTs:465 tree)
        • Acetanaerobacterium (isolates:1; rSTs:1)
          • Acetanaerobacterium elongatum (isolates:1; rSTs:1)
        • Acetivibrio (isolates:32; rSTs:20 tree)
          • Acetivibrio cellulolyticus (isolates:2; rSTs:1)
          • Acetivibrio clariflavus (isolates:5; rSTs:3 tree)
          • Acetivibrio ethanolgignens (isolates:2; rSTs:1)
          • Acetivibrio mesophilus (isolates:1; rSTs:1)
          • Acetivibrio saccincola (isolates:2; rSTs:2)
          • Acetivibrio straminisolvens (isolates:2; rSTs:2)
          • Acetivibrio thermocellus (isolates:18; rSTs:10 tree)
        • Amygdalobacter (isolates:5; rSTs:4 tree)
          • Amygdalobacter indicium (isolates:2; rSTs:2)
          • Amygdalobacter nucleatus (isolates:3; rSTs:2)
        • Anaerobacterium (isolates:1; rSTs:1)
          • Anaerobacterium chartisolvens (isolates:1; rSTs:1)
        • Anaerofilum (isolates:1; rSTs:1)
          • Anaerofilum hominis (isolates:1; rSTs:1)
        • Anaerotruncus (isolates:35; rSTs:28 tree)
          • Anaerotruncus colihominis (isolates:27; rSTs:19 tree)
          • Anaerotruncus massiliensis (ex Liu et al. 2021) (isolates:1; rSTs:1)
          • Anaerotruncus massiliensis (ex Togo et al. 2019) (isolates:1; rSTs:1)
          • Anaerotruncus rubiinfantis (isolates:4; rSTs:4 tree)
          • Anaerotruncus sp. (isolates:2; rSTs:3 tree)
        • Angelakisella (isolates:1; rSTs:1)
          • Angelakisella massiliensis (isolates:1; rSTs:1)
        • Bittarella (ex Durand et al. 2017) (isolates:7; rSTs:6 tree)
          • Bittarella massiliensis (ex Durand et al. 2017) (isolates:7; rSTs:6 tree)
        • Brotocaccenecus (isolates:2; rSTs:1)
          • Brotocaccenecus cirricatena (isolates:2; rSTs:1)
        • Caproicibacterium (isolates:4; rSTs:4 tree)
          • Caproicibacterium amylolyticum (isolates:1; rSTs:1)
          • Caproicibacterium argilliputei (isolates:1; rSTs:1)
          • Caproicibacterium lactatifermentans (isolates:2; rSTs:2)
        • Congzhengia (isolates:1; rSTs:1)
          • Congzhengia minquanensis (isolates:1; rSTs:1)
        • Drancourtella (isolates:7; rSTs:5 tree)
          • Drancourtella massiliensis (isolates:1; rSTs:1)
          • Drancourtella sp. (isolates:6; rSTs:4 tree)
        • Dysosmobacter (isolates:7; rSTs:7 tree)
          • Dysosmobacter acutus (isolates:1; rSTs:1)
          • Dysosmobacter segnis (isolates:1; rSTs:1)
          • Dysosmobacter sp. (isolates:1; rSTs:1)
          • Dysosmobacter welbionis (isolates:4; rSTs:4 tree)
        • Ethanoligenens (isolates:5; rSTs:1)
          • Ethanoligenens harbinense (isolates:5; rSTs:1)
        • Faecalibacterium (isolates:116; rSTs:133 tree)
          • Faecalibacterium butyricigenerans (isolates:2; rSTs:1)
          • Faecalibacterium duncaniae (isolates:11; rSTs:6 tree)
          • Faecalibacterium gallinarum (isolates:1; rSTs:1)
          • Faecalibacterium hattorii (isolates:1; rSTs:1)
          • Faecalibacterium intestinale (isolates:1; rSTs:1)
          • Faecalibacterium longum (isolates:4; rSTs:2)
          • Faecalibacterium prausnitzii (isolates:57; rSTs:34 tree)
          • Faecalibacterium sp. (isolates:36; rSTs:84 tree)
          • Faecalibacterium taiwanense (isolates:2; rSTs:2)
          • Faecalibacterium tardum (isolates:1; rSTs:1)
        • Faecalispora (isolates:7; rSTs:6 tree)
          • Faecalispora anaeroviscerum (isolates:1; rSTs:1)
          • Faecalispora jeddahensis (isolates:5; rSTs:4 tree)
          • Faecalispora sporosphaeroides (isolates:1; rSTs:1)
        • Faecousia (isolates:1; rSTs:1)
          • Faecousia intestinalis (isolates:1; rSTs:1)
        • Fastidiosipila (isolates:1; rSTs:1)
          • Fastidiosipila sanguinis (isolates:1; rSTs:1)
        • Flavonifractor (isolates:96; rSTs:58 tree)
          • Flavonifractor hominis (isolates:1; rSTs:1)
          • Flavonifractor plautii (isolates:94; rSTs:56 tree)
          • Flavonifractor sp. (isolates:1; rSTs:1)
        • Fournierella (isolates:4; rSTs:2)
          • Fournierella massiliensis (isolates:3; rSTs:1)
          • Fournierella sp. (isolates:1; rSTs:1)
        • Fumia (isolates:1; rSTs:1)
          • Fumia xinanensis (isolates:1; rSTs:1)
        • Hominenteromicrobium (isolates:3; rSTs:2)
          • Hominenteromicrobium mulieris (isolates:3; rSTs:2)
        • Hominicoprocola (isolates:1; rSTs:1)
          • Hominicoprocola fusiformis (isolates:1; rSTs:1)
        • Hominilimicola (isolates:2; rSTs:1)
          • Hominilimicola fabiformis (isolates:2; rSTs:1)
        • Huintestinicola (isolates:1; rSTs:1)
          • Huintestinicola butyrica (isolates:1; rSTs:1)
        • Hydrogenoanaerobacterium (isolates:2; rSTs:1)
          • Hydrogenoanaerobacterium saccharovorans (isolates:2; rSTs:1)
        • Lawsonibacter (isolates:3; rSTs:3 tree)
          • Lawsonibacter celer (isolates:1; rSTs:1)
          • Lawsonibacter faecis (isolates:1; rSTs:1)
          • Lawsonibacter hominis (isolates:1; rSTs:1)
        • Ligaoa (isolates:8; rSTs:2)
          • Ligaoa zhengdingensis (isolates:8; rSTs:2)
        • Mageeibacillus (isolates:3; rSTs:3 tree)
          • Mageeibacillus indolicus (isolates:3; rSTs:3 tree)
        • Marasmitruncus (isolates:1; rSTs:1)
          • Marasmitruncus massiliensis (isolates:1; rSTs:1)
        • Massiliimalia (isolates:4; rSTs:4 tree)
          • Massiliimalia massiliensis (isolates:1; rSTs:1)
          • Massiliimalia timonensis (isolates:3; rSTs:3 tree)
        • Merdimmobilis (isolates:3; rSTs:3 tree)
          • Merdimmobilis hominis (isolates:3; rSTs:3 tree)
        • Muriventricola (isolates:1; rSTs:1)
          • Muriventricola aceti (isolates:1; rSTs:1)
        • Neglectibacter (isolates:8; rSTs:3 tree)
          • Neglectibacter caecimuris (isolates:1)
          • Neglectibacter timonensis (isolates:7; rSTs:3 tree)
        • Neobittarella (isolates:2; rSTs:2)
          • Neobittarella massiliensis (isolates:2; rSTs:2)
        • Neopoerus (isolates:1; rSTs:1)
          • Neopoerus faecalis (isolates:1; rSTs:1)
        • Oscillibacter (isolates:3; rSTs:3 tree)
          • Oscillibacter hominis (isolates:1; rSTs:1)
          • Oscillibacter ruminantium (isolates:1; rSTs:1)
          • Oscillibacter valericigenes (isolates:1; rSTs:1)
        • Papillibacter (isolates:1; rSTs:1)
          • Papillibacter cinnamivorans (isolates:1; rSTs:1)
        • Petroclostridium (isolates:1; rSTs:1)
          • Petroclostridium xylanilyticum (isolates:1; rSTs:1)
        • Porcipelethomonas (isolates:1; rSTs:1)
          • Porcipelethomonas ammoniilytica (isolates:1; rSTs:1)
        • Provencibacterium (isolates:2; rSTs:1)
          • Provencibacterium massiliense (isolates:2; rSTs:1)
        • Pseudobacteroides (isolates:2; rSTs:1)
          • Pseudobacteroides cellulosolvens (isolates:2; rSTs:1)
        • Pseudoflavonifractor (isolates:15; rSTs:16 tree)
          • Pseudoflavonifractor capillosus (isolates:1; rSTs:1)
          • Pseudoflavonifractor gallinarum (isolates:1; rSTs:1)
          • Pseudoflavonifractor hominis (isolates:1; rSTs:1)
          • Pseudoflavonifractor intestinihominis (isolates:1; rSTs:1)
          • Pseudoflavonifractor phocaeensis (isolates:3; rSTs:2)
          • Pseudoflavonifractor sp. (isolates:8; rSTs:10 tree)
        • Pusillibacter (isolates:1; rSTs:1)
          • Pusillibacter faecalis (isolates:1; rSTs:1)
        • Pygmaiobacter (isolates:1; rSTs:1)
          • Pygmaiobacter massiliensis (isolates:1; rSTs:1)
        • Qingrenia (isolates:1)
          • Qingrenia yutianensis (isolates:1)
        • Ructibacterium (isolates:1)
          • Ructibacterium gallinarum (isolates:1)
        • Ruminiclostridium (isolates:11; rSTs:9 tree)
          • Ruminiclostridium cellobioparum (isolates:2; rSTs:2)
          • Ruminiclostridium cellulolyticum (isolates:1; rSTs:1)
          • Ruminiclostridium herbifermentans (isolates:1; rSTs:1)
          • Ruminiclostridium hungatei (isolates:1; rSTs:1)
          • Ruminiclostridium josui (isolates:2; rSTs:1)
          • Ruminiclostridium papyrosolvens (isolates:3; rSTs:2)
          • Ruminiclostridium sufflavum (isolates:1; rSTs:1)
        • Ruminococcoides (isolates:1; rSTs:1)
          • Ruminococcoides intestinihominis (isolates:1; rSTs:1)
        • Ruminococcus (isolates:83; rSTs:72 tree)
          • Ruminococcus albus (isolates:8; rSTs:7 tree)
          • Ruminococcus bicirculans (isolates:19; rSTs:13 tree)
          • Ruminococcus bovis (isolates:1; rSTs:1)
          • Ruminococcus bromii (isolates:13; rSTs:1 tree)
          • Ruminococcus callidus (isolates:4; rSTs:3 tree)
          • Ruminococcus champanellensis (isolates:2; rSTs:1)
          • Ruminococcus difficilis (isolates:1)
          • Ruminococcus flavefaciens (isolates:12; rSTs:11 tree)
          • Ruminococcus gauvreauii (isolates:3; rSTs:1)
          • Ruminococcus hominis (isolates:1; rSTs:1)
          • Ruminococcus intestinalis (isolates:1; rSTs:1)
          • Ruminococcus sp. (isolates:17; rSTs:31 tree)
          • Ruminococcus turbiniformis (isolates:1; rSTs:1)
        • Ruthenibacterium (isolates:35; rSTs:21 tree)
          • Ruthenibacterium intestinale (isolates:1; rSTs:1)
          • Ruthenibacterium lactatiformans (isolates:34; rSTs:20 tree)
        • Scatolibacter (isolates:1; rSTs:1)
          • Scatolibacter rhodanostii (isolates:1; rSTs:1)
        • Solibaculum (isolates:2; rSTs:2)
          • Solibaculum intestinale (isolates:1; rSTs:1)
          • Solibaculum mannosilyticum (isolates:1; rSTs:1)
        • Sporobacter (isolates:1; rSTs:1)
          • Sporobacter termitidis (isolates:1; rSTs:1)
        • Subdoligranulum (isolates:3; rSTs:1)
          • Subdoligranulum variabile (isolates:3; rSTs:1)
        • Thermocaproicibacter (isolates:1)
          • Thermocaproicibacter melissae (isolates:1)
        • Thermoclostridium (isolates:7; rSTs:5 tree)
          • Thermoclostridium caenicola (isolates:1; rSTs:1)
          • Thermoclostridium stercorarium (isolates:6; rSTs:4 tree)
        • Vermiculatibacterium (isolates:1; rSTs:1)
          • Vermiculatibacterium agrestimuris (isolates:1; rSTs:1)
        • Vescimonas (isolates:2; rSTs:2)
          • Vescimonas coprocola (isolates:1; rSTs:1)
          • Vescimonas fastidiosa (isolates:1; rSTs:1)
        • Yanshouia (isolates:1; rSTs:1)
          • Yanshouia hominis (isolates:1; rSTs:1)
        • Youxingia (isolates:1; rSTs:1)
          • Youxingia wuxianensis (isolates:1; rSTs:1)
        • Zongyangia (isolates:1; rSTs:1)
          • Zongyangia hominis (isolates:1; rSTs:1)
      • Peptococcaceae (isolates:36; rSTs:33 tree)
        • Acididesulfobacillus (isolates:2; rSTs:1)
          • Acididesulfobacillus acetoxydans (isolates:2; rSTs:1)
        • Candidatus Desulforudis (isolates:2; rSTs:1)
          • Candidatus Desulforudis audaxviator (isolates:2; rSTs:1)
        • Candidatus Dichloromethanomonas (isolates:1; rSTs:1)
          • Candidatus Dichloromethanomonas elyunquensis (isolates:1; rSTs:1)
        • Candidatus Formimonas (isolates:1; rSTs:1)
          • Candidatus Formimonas warabiya (isolates:1; rSTs:1)
        • Dehalobacterium (isolates:2; rSTs:2)
          • Dehalobacterium formicoaceticum (isolates:2; rSTs:2)
        • Desulfofalx (isolates:1; rSTs:1)
          • Desulfofalx alkaliphila (isolates:1; rSTs:1)
        • Desulfofarcimen (isolates:1; rSTs:1)
          • Desulfofarcimen acetoxidans (isolates:1; rSTs:1)
        • Desulfofundulus (isolates:8; rSTs:8 tree)
          • Desulfofundulus australicus (isolates:1; rSTs:1)
          • Desulfofundulus kuznetsovii (isolates:1; rSTs:1)
          • Desulfofundulus luciae (isolates:1; rSTs:1)
          • Desulfofundulus salinus (isolates:1; rSTs:1)
          • Desulfofundulus sp. (isolates:1; rSTs:1)
          • Desulfofundulus thermobenzoicus (isolates:1; rSTs:1)
          • Desulfofundulus thermocisternus (isolates:1; rSTs:1)
          • Desulfofundulus thermosubterraneus (isolates:1; rSTs:1)
        • Desulfolucanica (isolates:1; rSTs:1)
          • Desulfolucanica intricata (isolates:1; rSTs:1)
        • Desulfonispora (isolates:1; rSTs:1)
          • Desulfonispora thiosulfatigenes (isolates:1; rSTs:1)
        • Desulforadius (isolates:1; rSTs:1)
          • Desulforadius tongensis (isolates:1; rSTs:1)
        • Desulforamulus (isolates:11; rSTs:11 tree)
          • Desulforamulus aeronauticus (isolates:1; rSTs:1)
          • Desulforamulus aquiferis (isolates:2; rSTs:2)
          • Desulforamulus ferrireducens (isolates:1; rSTs:1)
          • Desulforamulus hydrothermalis (isolates:2; rSTs:2)
          • Desulforamulus profundi (isolates:1; rSTs:1)
          • Desulforamulus putei (isolates:1; rSTs:1)
          • Desulforamulus reducens (isolates:1; rSTs:1)
          • Desulforamulus ruminis (isolates:2; rSTs:2)
        • Paradesulfitobacterium (isolates:1)
          • Paradesulfitobacterium ferrireducens (isolates:1)
        • Peptococcus (isolates:1; rSTs:1)
          • Peptococcus niger (isolates:1; rSTs:1)
        • Phosphitispora (isolates:1; rSTs:1)
          • Phosphitispora fastidiosa (isolates:1; rSTs:1)
        • Thermanaerosceptrum (isolates:1; rSTs:1)
          • Thermanaerosceptrum fracticalcis (isolates:1; rSTs:1)
      • Proteinivoraceae (isolates:5; rSTs:5 tree)
        • Alkalicella (isolates:1; rSTs:1)
          • Alkalicella caledoniensis (isolates:1; rSTs:1)
        • Anaerobranca (isolates:2; rSTs:2)
          • Anaerobranca californiensis (isolates:1; rSTs:1)
          • Anaerobranca gottschalkii (isolates:1; rSTs:1)
        • Proteinivorax (isolates:2; rSTs:2)
          • Proteinivorax hydrogeniformans (isolates:1; rSTs:1)
          • Proteinivorax tanatarense (isolates:1; rSTs:1)
      • Pumilibacteraceae (isolates:3; rSTs:1)
        • Anaerocaecibacter (isolates:1; rSTs:1)
          • Anaerocaecibacter muris (isolates:1; rSTs:1)
        • Pumilibacter (isolates:2)
          • Pumilibacter intestinalis (isolates:1)
          • Pumilibacter muris (isolates:1)
      • Symbiobacteriaceae (isolates:3; rSTs:2)
        • Caldinitratiruptor (isolates:1)
          • Caldinitratiruptor microaerophilus (isolates:1)
        • Symbiobacterium (isolates:2; rSTs:2)
          • Symbiobacterium terraclitae (isolates:1; rSTs:1)
          • Symbiobacterium thermophilum (isolates:1; rSTs:1)
      • Syntrophomonadaceae (isolates:7; rSTs:7 tree)
        • Candidatus Syntrophocurvum (isolates:1; rSTs:1)
          • Candidatus Syntrophocurvum alkaliphilum (isolates:1; rSTs:1)
        • Syntrophomonas (isolates:4; rSTs:4 tree)
          • Syntrophomonas palmitatica (isolates:1; rSTs:1)
          • Syntrophomonas wolfei (isolates:2; rSTs:2)
          • Syntrophomonas zehnderi (isolates:1; rSTs:1)
        • Syntrophothermus (isolates:1; rSTs:1)
          • Syntrophothermus lipocalidus (isolates:1; rSTs:1)
        • Thermosyntropha (isolates:1; rSTs:1)
          • Thermosyntropha lipolytica (isolates:1; rSTs:1)
      • Thermincolaceae (isolates:2; rSTs:2)
        • Thermincola (isolates:2; rSTs:2)
          • Thermincola ferriacetica (isolates:1; rSTs:1)
          • Thermincola potens (isolates:1; rSTs:1)
      • Yeguiaceae (isolates:1; rSTs:1)
        • Yeguia (isolates:1; rSTs:1)
          • Yeguia hominis (isolates:1; rSTs:1)
    • Halanaerobiales (isolates:51; rSTs:36 tree)
      • Halanaerobiaceae (isolates:29; rSTs:19 tree)
        • Halanaerobium (isolates:28; rSTs:18 tree)
          • Halanaerobium congolense (isolates:15; rSTs:9 tree)
          • Halanaerobium hydrogeniformans (isolates:1; rSTs:1)
          • Halanaerobium kushneri (isolates:1; rSTs:1)
          • Halanaerobium polyolivorans (isolates:1; rSTs:1)
          • Halanaerobium praevalens (isolates:2; rSTs:1)
          • Halanaerobium saccharolyticum (isolates:1; rSTs:1)
          • Halanaerobium salsuginis (isolates:1; rSTs:1)
          • Halanaerobium sp. (isolates:6; rSTs:3 tree)
        • Iocasia (isolates:1; rSTs:1)
          • Iocasia fonsfrigidae (isolates:1; rSTs:1)
      • Halarsenatibacteraceae (isolates:2; rSTs:1)
        • Halarsenatibacter (isolates:1; rSTs:1)
          • Halarsenatibacter silvermanii (isolates:1; rSTs:1)
        • Halonatronomonas (isolates:1)
          • Halonatronomonas betaini (isolates:1)
      • Halobacteroidaceae (isolates:18; rSTs:14 tree)
        • Acetohalobium (isolates:1; rSTs:1)
          • Acetohalobium arabaticum (isolates:1; rSTs:1)
        • Candidatus Frackibacter (isolates:4; rSTs:3 tree)
          • Candidatus Frackibacter sp. (isolates:4; rSTs:3 tree)
        • Fuchsiella (isolates:1)
          • Fuchsiella alkaliacetigena (isolates:1)
        • Halanaerobacter (isolates:1; rSTs:1)
          • Halanaerobacter jeridensis (isolates:1; rSTs:1)
        • Halobacteroides (isolates:1; rSTs:1)
          • Halobacteroides halobius (isolates:1; rSTs:1)
        • Halonatronum (isolates:1; rSTs:1)
          • Halonatronum saccharophilum (isolates:1; rSTs:1)
        • Natroniella (isolates:2; rSTs:1)
          • Natroniella acetigena (isolates:1)
          • Natroniella sulfidigena (isolates:1; rSTs:1)
        • Orenia (isolates:5; rSTs:4 tree)
          • Orenia marismortui (isolates:2; rSTs:2)
          • Orenia metallireducens (isolates:3; rSTs:2)
        • Selenihalanaerobacter (isolates:1; rSTs:1)
          • Selenihalanaerobacter shriftii (isolates:1; rSTs:1)
        • Sporohalobacter (isolates:1; rSTs:1)
          • Sporohalobacter salinus (isolates:1; rSTs:1)
      • Halothermotrichaceae (isolates:1; rSTs:1)
        • Halothermothrix (isolates:1; rSTs:1)
          • Halothermothrix orenii (isolates:1; rSTs:1)
    • Koleobacterales (isolates:1; rSTs:1)
      • Koleobacteraceae (isolates:1; rSTs:1)
        • Koleobacter (isolates:1; rSTs:1)
          • Koleobacter methoxysyntrophicus (isolates:1; rSTs:1)
    • Lachnospirales (isolates:2012; rSTs:1422)
      • Anaerotignaceae (isolates:13; rSTs:10 tree)
        • Anaerotignum (isolates:13; rSTs:10 tree)
          • Anaerotignum faecicola (isolates:1; rSTs:1)
          • Anaerotignum lactatifermentans (isolates:7; rSTs:5 tree)
          • Anaerotignum neopropionicum (isolates:1; rSTs:1)
          • Anaerotignum propionicum (isolates:3; rSTs:2)
          • Anaerotignum sp. (isolates:1; rSTs:1)
      • Cellulosilyticaceae (isolates:3; rSTs:3 tree)
        • Cellulosilyticum (isolates:3; rSTs:3 tree)
          • Cellulosilyticum lentocellum (isolates:1; rSTs:1)
          • Cellulosilyticum ruminicola (isolates:1; rSTs:1)
          • Cellulosilyticum sp. (isolates:1; rSTs:1)
      • Defluviitaleaceae (isolates:4; rSTs:3 tree)
        • Defluviitalea (isolates:4; rSTs:3 tree)
          • Defluviitalea phaphyphila (isolates:1; rSTs:1)
          • Defluviitalea raffinosedens (isolates:2; rSTs:2)
          • Defluviitalea saccharophila (isolates:1)
      • Lachnospiraceae (isolates:1982; rSTs:1397)
        • Acetatifactor (isolates:3; rSTs:2)
          • Acetatifactor aquisgranensis (isolates:1; rSTs:1)
          • Acetatifactor muris (isolates:2; rSTs:1)
        • Acetitomaculum (isolates:1; rSTs:1)
          • Acetitomaculum ruminis (isolates:1; rSTs:1)
        • Aequitasia (isolates:2; rSTs:1)
          • Aequitasia blattaphilus (isolates:2; rSTs:1)
        • Africanella (isolates:1; rSTs:1)
          • Africanella massiliensis (isolates:1; rSTs:1)
        • Agathobacter (isolates:124; rSTs:73 tree)
          • Agathobacter rectalis (isolates:122; rSTs:72 tree)
          • Agathobacter ruminis (isolates:2; rSTs:1)
        • Anaerobium (isolates:1; rSTs:1)
          • Anaerobium acetethylicum (isolates:1; rSTs:1)
        • Anaerobutyricum (isolates:22; rSTs:18 tree)
          • Anaerobutyricum hallii (isolates:16; rSTs:13 tree)
          • Anaerobutyricum soehngenii (isolates:6; rSTs:5 tree)
        • Anaerocolumna (isolates:13; rSTs:11 tree)
          • Anaerocolumna aminovalerica (isolates:4; rSTs:3 tree)
          • Anaerocolumna cellulosilytica (isolates:2; rSTs:1)
          • Anaerocolumna chitinilytica (isolates:1; rSTs:1)
          • Anaerocolumna jejuensis (isolates:1; rSTs:1)
          • Anaerocolumna sedimenticola (isolates:1; rSTs:1)
          • Anaerocolumna sp. (isolates:3; rSTs:3 tree)
          • Anaerocolumna xylanovorans (isolates:1; rSTs:1)
        • Anaerolentibacter (isolates:1; rSTs:1)
          • Anaerolentibacter hominis (isolates:1; rSTs:1)
        • Anaeromicropila (isolates:2; rSTs:2)
          • Anaeromicropila herbilytica (isolates:1; rSTs:1)
          • Anaeromicropila populeti (isolates:1; rSTs:1)
        • Anaeropeptidivorans (isolates:1; rSTs:1)
          • Anaeropeptidivorans aminofermentans (isolates:1; rSTs:1)
        • Anaerosacchariphilus (isolates:1; rSTs:1)
          • Anaerosacchariphilus polymeriproducens (isolates:1; rSTs:1)
        • Anaerosporobacter (isolates:2; rSTs:2)
          • Anaerosporobacter faecicola (isolates:1; rSTs:1)
          • Anaerosporobacter mobilis (isolates:1; rSTs:1)
        • Anaerostipes (isolates:111; rSTs:71 tree)
          • Anaerostipes amylophilus (isolates:2; rSTs:2)
          • Anaerostipes butyraticus (isolates:1; rSTs:1)
          • Anaerostipes caccae (isolates:32; rSTs:11 tree)
          • Anaerostipes faecalis (isolates:1; rSTs:1)
          • Anaerostipes hadrus (isolates:65; rSTs:46 tree)
          • Anaerostipes hominis (ex Lee et al. 2021) (isolates:3; rSTs:2)
          • Anaerostipes rhamnosivorans (isolates:1; rSTs:1)
          • Anaerostipes sp. (isolates:6; rSTs:7 tree)
        • Anthropogastromicrobium (isolates:3; rSTs:2)
          • Anthropogastromicrobium aceti (isolates:3; rSTs:2)
        • Bariatricus (isolates:6; rSTs:1)
          • Bariatricus massiliensis (isolates:6; rSTs:1)
        • Bilifractor (isolates:1; rSTs:1)
          • Bilifractor porci (isolates:1; rSTs:1)
        • Blautia (isolates:356; rSTs:255 tree)
          • Blautia acetigignens (isolates:2; rSTs:2)
          • Blautia ammoniilytica (isolates:1; rSTs:1)
          • Blautia aquisgranensis (isolates:1; rSTs:1)
          • Blautia argi (isolates:1; rSTs:1)
          • Blautia caecimuris (isolates:3; rSTs:2)
          • Blautia coccoides (isolates:7; rSTs:4 tree)
          • Blautia difficilis (isolates:1; rSTs:1)
          • Blautia faecicola (isolates:1; rSTs:1)
          • Blautia faecis (isolates:19; rSTs:18 tree)
          • Blautia glucerasea (isolates:1; rSTs:1)
          • Blautia hansenii (isolates:6; rSTs:4 tree)
          • Blautia hominis (isolates:1; rSTs:1)
          • Blautia hydrogenotrophica (isolates:6; rSTs:2)
          • Blautia intestinalis (isolates:5; rSTs:5 tree)
          • Blautia intestinihominis (isolates:1; rSTs:1)
          • Blautia liquoris (isolates:1; rSTs:1)
          • Blautia luti (isolates:3; rSTs:2)
          • Blautia marasmi (isolates:2; rSTs:2)
          • Blautia massiliensis (isolates:33; rSTs:27 tree)
          • Blautia obeum (isolates:66; rSTs:49 tree)
          • Blautia producta (isolates:6; rSTs:2)
          • Blautia pseudococcoides (isolates:4; rSTs:2)
          • Blautia schinkii (isolates:7; rSTs:2)
          • Blautia sp. (isolates:50; rSTs:52 tree)
          • Blautia stercoris (isolates:1; rSTs:1)
          • Blautia wexlerae (isolates:127; rSTs:70 tree)
        • Brotaphodocola (isolates:2; rSTs:1)
          • Brotaphodocola catenula (isolates:2; rSTs:1)
        • Brotonthovivens (isolates:1; rSTs:1)
          • Brotonthovivens ammoniilytica (isolates:1; rSTs:1)
        • Butyribacter (isolates:3; rSTs:3 tree)
          • Butyribacter intestini (isolates:3; rSTs:3 tree)
        • Butyrivibrio (isolates:46; rSTs:60 tree)
          • Butyrivibrio crossotus (isolates:3; rSTs:2)
          • Butyrivibrio fibrisolvens (isolates:11; rSTs:10 tree)
          • Butyrivibrio hungatei (isolates:2; rSTs:2)
          • Butyrivibrio proteoclasticus (isolates:4; rSTs:4 tree)
          • Butyrivibrio sp. (isolates:26; rSTs:42 tree)
        • Candidatus Epulonipiscium (isolates:2; rSTs:1)
          • Candidatus Epulonipiscium viviparus (isolates:2; rSTs:1)
        • Candidatus Galacturonibacter (isolates:1; rSTs:1)
          • Candidatus Galacturonibacter soehngenii (isolates:1; rSTs:1)
        • Catenibacillus (isolates:1; rSTs:1)
          • Catenibacillus scindens (isolates:1; rSTs:1)
        • Catonella (isolates:2; rSTs:2)
          • Catonella massiliensis (isolates:1; rSTs:1)
          • Catonella morbi (isolates:1; rSTs:1)
        • Chordicoccus (isolates:1; rSTs:1)
          • Chordicoccus furentiruminis (isolates:1; rSTs:1)
        • Claveliimonas (isolates:4; rSTs:4 tree)
          • Claveliimonas bilis (isolates:4; rSTs:4 tree)
        • Coprococcus (isolates:139; rSTs:97 tree)
          • Coprococcus aceti (isolates:3; rSTs:3 tree)
          • Coprococcus ammoniilyticus (isolates:2; rSTs:2)
          • Coprococcus catus (isolates:3; rSTs:2 tree)
          • Coprococcus comes (isolates:77; rSTs:46 tree)
          • Coprococcus eutactus (isolates:18; rSTs:6 tree)
          • Coprococcus hominis (ex Liu et al. 2022) (isolates:1; rSTs:1)
          • Coprococcus intestinihominis (isolates:1)
          • Coprococcus sp. (isolates:34; rSTs:37 tree)
        • Cuneatibacter (isolates:1; rSTs:1)
          • Cuneatibacter caecimuris (isolates:1; rSTs:1)
        • Diplocloster (isolates:4; rSTs:4 tree)
          • Diplocloster agilis (isolates:2; rSTs:2)
          • Diplocloster hominis (isolates:1; rSTs:1)
          • Diplocloster modestus (isolates:1; rSTs:1)
        • Dorea (isolates:147; rSTs:111 tree)
          • Dorea acetigenes (isolates:1; rSTs:1)
          • Dorea ammoniilytica (isolates:1; rSTs:1)
          • Dorea amylophila (isolates:9; rSTs:7 tree)
          • Dorea formicigenerans (isolates:66; rSTs:38 tree)
          • Dorea hominis (isolates:1; rSTs:1)
          • Dorea longicatena (isolates:51; rSTs:31 tree)
          • Dorea phocaeensis (isolates:3; rSTs:3 tree)
          • Dorea sp. (isolates:15; rSTs:29 tree)
        • Eisenbergiella (isolates:17; rSTs:16 tree)
          • Eisenbergiella massiliensis (isolates:3; rSTs:3 tree)
          • Eisenbergiella porci (isolates:1; rSTs:1)
          • Eisenbergiella sp. (isolates:1; rSTs:1)
          • Eisenbergiella tayi (isolates:12; rSTs:11 tree)
        • Enterocloster (isolates:138; rSTs:86 tree)
          • Enterocloster alcoholdehydrogenati (isolates:1; rSTs:1)
          • Enterocloster aldenensis (isolates:10; rSTs:9 tree)
          • Enterocloster asparagiformis (isolates:4; rSTs:3 tree)
          • Enterocloster bolteae (isolates:42; rSTs:28 tree)
          • Enterocloster citroniae (isolates:14; rSTs:10 tree)
          • Enterocloster clostridioformis (isolates:55; rSTs:25 tree)
          • Enterocloster hominis (isolates:1; rSTs:1)
          • Enterocloster hominis (ex Hitch et al. 2024) (isolates:3; rSTs:2)
          • Enterocloster lavalensis (isolates:4; rSTs:4 tree)
          • Enterocloster sp. (isolates:4; rSTs:3 tree)
        • Extibacter (isolates:2; rSTs:1 tree)
          • Extibacter muris (isolates:2; rSTs:1)
        • Faecalicatena (isolates:13; rSTs:12 tree)
          • Faecalicatena contorta (isolates:6; rSTs:6 tree)
          • Faecalicatena faecalis (isolates:1; rSTs:1)
          • Faecalicatena fissicatena (isolates:2; rSTs:2)
          • Faecalicatena orotica (isolates:4; rSTs:3 tree)
        • Faecalimonas (isolates:13; rSTs:7 tree)
          • Faecalimonas umbilicata (isolates:13; rSTs:7 tree)
        • Frisingicoccus (isolates:2; rSTs:1)
          • Frisingicoccus caecimuris (isolates:2; rSTs:1)
        • Fusibacillus (isolates:1; rSTs:1)
          • Fusibacillus kribbianus (isolates:1; rSTs:1)
        • Fusicatenibacter (isolates:44; rSTs:24 tree)
          • Fusicatenibacter faecihominis (isolates:2; rSTs:1)
          • Fusicatenibacter saccharivorans (isolates:42; rSTs:23 tree)
        • Gallintestinimicrobium (isolates:4; rSTs:3 tree)
          • Gallintestinimicrobium propionicum (isolates:4; rSTs:3 tree)
        • Herbinix (isolates:3; rSTs:2)
          • Herbinix hemicellulosilytica (isolates:2; rSTs:1)
          • Herbinix luporum (isolates:1; rSTs:1)
        • Hespellia (isolates:1; rSTs:1)
          • Hespellia stercorisuis (isolates:1; rSTs:1)
        • Hominifimenecus (isolates:3; rSTs:2)
          • Hominifimenecus microfluidus (isolates:3; rSTs:2)
        • Hominisplanchenecus (isolates:4; rSTs:3 tree)
          • Hominisplanchenecus faecis (isolates:2; rSTs:1)
          • Hominisplanchenecus murintestinalis (isolates:2; rSTs:2)
        • Hominiventricola (isolates:3; rSTs:2)
          • Hominiventricola aquisgranensis (isolates:1; rSTs:1)
          • Hominiventricola filiformis (isolates:2; rSTs:1)
        • Hungatella (isolates:25; rSTs:28 tree)
          • Hungatella effluvii (isolates:2; rSTs:2 tree)
          • Hungatella hathewayi (isolates:18; rSTs:14 tree)
          • Hungatella hominis (isolates:3; rSTs:3 tree)
          • Hungatella sp. (isolates:2; rSTs:9 tree)
        • Jingyaoa (isolates:1; rSTs:1)
          • Jingyaoa shaoxingensis (isolates:1; rSTs:1)
        • Johnsonella (isolates:1; rSTs:1)
          • Johnsonella ignava (isolates:1; rSTs:1)
        • Jutongia (isolates:2; rSTs:2)
          • Jutongia hominis (isolates:1; rSTs:1)
          • Jutongia huaianensis (isolates:1; rSTs:1)
        • Kineothrix (isolates:4; rSTs:3 tree)
          • Kineothrix alysoides (isolates:2; rSTs:1)
          • Kineothrix sp. (isolates:2; rSTs:2)
        • Konateibacter (isolates:1; rSTs:1)
          • Konateibacter massiliensis (isolates:1; rSTs:1)
        • Lachnoanaerobaculum (isolates:13; rSTs:11 tree)
          • Lachnoanaerobaculum gingivalis (isolates:2; rSTs:2)
          • Lachnoanaerobaculum orale (isolates:1; rSTs:1)
          • Lachnoanaerobaculum saburreum (isolates:2; rSTs:2)
          • Lachnoanaerobaculum sp. (isolates:5; rSTs:5 tree)
          • Lachnoanaerobaculum umeaense (isolates:3; rSTs:1)
        • Lachnobacterium (isolates:5; rSTs:6 tree)
          • Lachnobacterium bovis (isolates:5; rSTs:6 tree)
        • Lachnoclostridium (isolates:119; rSTs:69 tree)
          • Lachnoclostridium edouardi (isolates:2; rSTs:1)
          • Lachnoclostridium phocaeense (isolates:1; rSTs:1)
          • Lachnoclostridium phytofermentans (isolates:4; rSTs:3 tree)
          • Lachnoclostridium sp. (isolates:2; rSTs:1)
          • [Clostridium] aminophilum (isolates:3; rSTs:2)
          • [Clostridium] fimetarium (isolates:1; rSTs:1)
          • [Clostridium] hylemonae (isolates:7; rSTs:4 tree)
          • [Clostridium] polysaccharolyticum (isolates:1; rSTs:1)
          • [Clostridium] scindens (isolates:37; rSTs:21 tree)
          • [Clostridium] symbiosum (isolates:61; rSTs:34 tree)
        • Lachnospira (isolates:33; rSTs:30 tree)
          • Lachnospira eligens (isolates:24; rSTs:19 tree)
          • Lachnospira hominis (isolates:1; rSTs:1)
          • Lachnospira hominis (ex Hitch et al. 2024) (isolates:1; rSTs:1)
          • Lachnospira multipara (isolates:4; rSTs:4 tree)
          • Lachnospira pectinoschiza (isolates:2; rSTs:2 tree)
          • Lachnospira sp. (isolates:1; rSTs:3 tree)
        • Lachnotalea (isolates:2; rSTs:2)
          • Lachnotalea glycerini (isolates:2; rSTs:2)
        • Lacrimispora (isolates:16; rSTs:15 tree)
          • Lacrimispora aerotolerans (isolates:1; rSTs:1)
          • Lacrimispora algidixylanolytica (isolates:1; rSTs:1)
          • Lacrimispora amygdalina (isolates:1; rSTs:1)
          • Lacrimispora celerecrescens (isolates:2; rSTs:2)
          • Lacrimispora defluvii (isolates:1)
          • Lacrimispora indolis (isolates:2; rSTs:2)
          • Lacrimispora saccharolytica (isolates:2; rSTs:1)
          • Lacrimispora sp. (isolates:1; rSTs:3 tree)
          • Lacrimispora sphenoides (isolates:3; rSTs:1)
          • Lacrimispora xylanisolvens (isolates:1; rSTs:2)
          • Lacrimispora xylanolytica (isolates:1; rSTs:1)
        • Laedolimicola (isolates:2; rSTs:2)
          • Laedolimicola ammoniilytica (isolates:1; rSTs:1)
          • Laedolimicola intestinihominis (isolates:1; rSTs:1)
        • Lientehia (isolates:1; rSTs:1)
          • Lientehia hominis (isolates:1; rSTs:1)
        • Luxibacter (isolates:1; rSTs:1)
          • Luxibacter massiliensis (isolates:1; rSTs:1)
        • Maccoya (isolates:1; rSTs:1)
          • Maccoya intestinihominis (isolates:1; rSTs:1)
        • Marvinbryantia (isolates:25; rSTs:1)
          • Marvinbryantia formatexigens (isolates:25; rSTs:1)
        • Mediterraneibacter (isolates:276; rSTs:159 tree)
          • Mediterraneibacter agrestimuris (isolates:1; rSTs:1)
          • Mediterraneibacter butyricigenes (isolates:1; rSTs:1)
          • Mediterraneibacter catenae (isolates:1; rSTs:1)
          • Mediterraneibacter faecis (isolates:42; rSTs:24 tree)
          • Mediterraneibacter glycyrrhizinilyticus (isolates:3; rSTs:3 tree)
          • Mediterraneibacter gnavus (isolates:159; rSTs:88 tree)
          • Mediterraneibacter hominis (isolates:1; rSTs:1)
          • Mediterraneibacter massiliensis (isolates:2; rSTs:2)
          • Mediterraneibacter sp. (isolates:3; rSTs:3 tree)
          • [Ruminococcus] lactaris (isolates:28; rSTs:15 tree)
          • [Ruminococcus] torques (isolates:35; rSTs:20 tree)
        • Merdimonas (isolates:3; rSTs:2)
          • Merdimonas faecis (isolates:3; rSTs:2)
        • Mobilisporobacter (isolates:1; rSTs:1)
          • Mobilisporobacter senegalensis (isolates:1; rSTs:1)
        • Mobilitalea (isolates:1; rSTs:1)
          • Mobilitalea sibirica (isolates:1; rSTs:1)
        • Moryella (isolates:1; rSTs:1)
          • Moryella indoligenes (isolates:1; rSTs:1)
        • Muricomes (isolates:1; rSTs:1)
          • Muricomes intestini (isolates:1; rSTs:1)
        • Muricoprocola (isolates:1; rSTs:1)
          • Muricoprocola aceti (isolates:1; rSTs:1)
        • Murimonas (isolates:5; rSTs:2)
          • Murimonas intestini (isolates:5; rSTs:2)
        • Niameybacter (isolates:1; rSTs:2)
          • Niameybacter massiliensis (isolates:1; rSTs:2)
        • Novisyntrophococcus (isolates:1; rSTs:1)
          • Novisyntrophococcus fermenticellae (isolates:1; rSTs:1)
        • Ohessyouella (isolates:2; rSTs:1)
          • Ohessyouella blattaphilus (isolates:2; rSTs:1)
        • Oliverpabstia (isolates:3; rSTs:3 tree)
          • Oliverpabstia intestinalis (isolates:2; rSTs:2)
          • Oliverpabstia sp. (isolates:1; rSTs:1)
        • Oribacterium (isolates:6; rSTs:7 tree)
          • Oribacterium asaccharolyticum (isolates:1; rSTs:1)
          • Oribacterium parvum (isolates:2; rSTs:2)
          • Oribacterium sinus (isolates:2; rSTs:2)
          • Oribacterium sp. (isolates:1; rSTs:2)
        • Otoolea (isolates:1; rSTs:1)
          • Otoolea muris (isolates:1; rSTs:1)
        • Parablautia (isolates:2; rSTs:2)
          • Parablautia intestinalis (isolates:1; rSTs:1)
          • Parablautia muri (isolates:1; rSTs:1)
        • Parasporobacterium (isolates:1; rSTs:1)
          • Parasporobacterium paucivorans (isolates:1; rSTs:1)
        • Petralouisia (isolates:1; rSTs:1)
          • Petralouisia muris (isolates:1; rSTs:1)
        • Porcincola (isolates:1; rSTs:1)
          • Porcincola intestinalis (isolates:1; rSTs:1)
        • Pseudobutyrivibrio (isolates:18; rSTs:20 tree)
          • Pseudobutyrivibrio ruminis (isolates:4; rSTs:4 tree)
          • Pseudobutyrivibrio sp. (isolates:11; rSTs:13 tree)
          • Pseudobutyrivibrio xylanivorans (isolates:3; rSTs:3 tree)
        • Qiania (isolates:1; rSTs:1)
          • Qiania dongpingensis (isolates:1; rSTs:1)
        • Robinsoniella (isolates:6; rSTs:5 tree)
          • Robinsoniella peoriensis (isolates:4; rSTs:3 tree)
          • Robinsoniella sp. (isolates:2; rSTs:2)
        • Roseburia (isolates:94; rSTs:76 tree)
          • Roseburia amylophila (isolates:5; rSTs:4 tree)
          • Roseburia faecis (isolates:16; rSTs:15 tree)
          • Roseburia hominis (isolates:8; rSTs:6 tree)
          • Roseburia intestinalis (isolates:20; rSTs:15 tree)
          • Roseburia inulinivorans (isolates:16; rSTs:14 tree)
          • Roseburia lenta (isolates:1; rSTs:1)
          • Roseburia porci (isolates:1; rSTs:1)
          • Roseburia rectibacter (isolates:1; rSTs:1)
          • Roseburia sp. (isolates:24; rSTs:17 tree)
          • Roseburia yibonii (isolates:1; rSTs:1)
          • Roseburia zhanii (isolates:1; rSTs:1)
        • Schaedlerella (isolates:2; rSTs:3 tree)
          • Schaedlerella arabinosiphila (isolates:2; rSTs:3 tree)
        • Sellimonas (isolates:19; rSTs:10 tree)
          • Sellimonas caecigallum (isolates:1; rSTs:1)
          • Sellimonas intestinalis (isolates:18; rSTs:9 tree)
        • Shuttleworthella (isolates:2; rSTs:2)
          • Shuttleworthella satelles (isolates:1; rSTs:1)
          • Shuttleworthella sp. (isolates:1; rSTs:1)
        • Simiaoa (isolates:1; rSTs:1)
          • Simiaoa sunii (isolates:1; rSTs:1)
        • Sporanaerobium (isolates:1; rSTs:1)
          • Sporanaerobium hydrogeniformans (isolates:1; rSTs:1)
        • Sporofaciens (isolates:2; rSTs:2)
          • Sporofaciens musculi (isolates:1; rSTs:1)
          • Sporofaciens sp. (isolates:1; rSTs:1)
        • Stomatobaculum (isolates:3; rSTs:2)
          • Stomatobaculum longum (isolates:2; rSTs:1)
          • Stomatobaculum sp. (isolates:1; rSTs:1)
        • Suilimivivens (isolates:1; rSTs:1)
          • Suilimivivens aceti (isolates:1; rSTs:1)
        • Suipraeoptans (isolates:1; rSTs:1)
          • Suipraeoptans intestinalis (isolates:1; rSTs:1)
        • Tyzzerella (isolates:9; rSTs:7 tree)
          • [Clostridium] colinum (isolates:1; rSTs:1)
          • [Clostridium] nexile (isolates:8; rSTs:6 tree)
        • Variimorphobacter (isolates:1; rSTs:1)
          • Variimorphobacter saccharofermentans (isolates:1; rSTs:1)
        • Velocimicrobium (isolates:1; rSTs:1)
          • Velocimicrobium porci (isolates:1; rSTs:1)
        • Waltera (isolates:4; rSTs:3 tree)
          • Waltera acetigignens (isolates:3; rSTs:2)
          • Waltera intestinalis (isolates:1; rSTs:1)
        • Wansuia (isolates:1; rSTs:1)
          • Wansuia hejianensis (isolates:1; rSTs:1)
        • Wujia (isolates:1; rSTs:1)
          • Wujia chipingensis (isolates:1; rSTs:1)
        • Zhenhengia (isolates:1; rSTs:1)
          • Zhenhengia yiwuensis (isolates:1; rSTs:1)
      • Natranaerovirgaceae (isolates:2; rSTs:2)
        • Natranaerovirga (isolates:2; rSTs:2)
          • Natranaerovirga hydrolytica (isolates:1; rSTs:1)
          • Natranaerovirga pectinivora (isolates:1; rSTs:1)
      • Vallitaleaceae (isolates:8; rSTs:7 tree)
        • Petrocella (isolates:2; rSTs:2)
          • Petrocella atlantisensis (isolates:1; rSTs:1)
          • Petrocella sp. (isolates:1; rSTs:1)
        • Vallitalea (isolates:6; rSTs:5 tree)
          • Vallitalea guaymasensis (isolates:2; rSTs:2)
          • Vallitalea longa (isolates:1; rSTs:1)
          • Vallitalea okinawensis (isolates:1; rSTs:1)
          • Vallitalea pronyensis (isolates:1; rSTs:1)
          • Vallitalea sp. (isolates:1)
    • Lutisporales (isolates:2; rSTs:2)
      • Lutisporaceae (isolates:2; rSTs:2)
        • Lutispora (isolates:2; rSTs:2)
          • Lutispora saccharofermentans (isolates:1; rSTs:1)
          • Lutispora thermophila (isolates:1; rSTs:1)
    • Monoglobales (isolates:2; rSTs:2)
      • Monoglobaceae (isolates:2; rSTs:2)
        • Monoglobus (isolates:2; rSTs:2)
          • Monoglobus pectinilyticus (isolates:2; rSTs:2)
    • Moorellales (isolates:41; rSTs:32 tree)
      • Calderihabitantaceae (isolates:1; rSTs:1)
        • Calderihabitans (isolates:1; rSTs:1)
          • Calderihabitans maritimus (isolates:1; rSTs:1)
      • Desulfitibacteraceae (isolates:3; rSTs:2)
        • Desulfitibacter (isolates:2; rSTs:2)
          • Desulfitibacter alkalitolerans (isolates:1; rSTs:1)
          • Desulfitibacter sp. (isolates:1; rSTs:1)
        • Metallumcola (isolates:1)
          • Metallumcola ferriviriculae (isolates:1)
      • Moorellaceae (isolates:36; rSTs:28 tree)
        • Moorella (isolates:35; rSTs:27 tree)
          • Moorella glycerini (isolates:1; rSTs:1)
          • Moorella humiferrea (isolates:4; rSTs:3 tree)
          • Moorella mulderi (isolates:1; rSTs:1)
          • Moorella sp. (isolates:4; rSTs:3 tree)
          • Moorella stamsii (isolates:1; rSTs:1)
          • Moorella sulfitireducens (isolates:1; rSTs:1)
          • Moorella thermoacetica (isolates:23; rSTs:17 tree)
        • Thermanaeromonas (isolates:1; rSTs:1)
          • Thermanaeromonas toyohensis (isolates:1; rSTs:1)
      • Zhaonellaceae (isolates:1; rSTs:1)
        • Zhaonella (isolates:1; rSTs:1)
          • Zhaonella formicivorans (isolates:1; rSTs:1)
    • Natranaerobiales (isolates:4; rSTs:4 tree)
      • Natranaerobiaceae (isolates:3; rSTs:3 tree)
        • Natranaerobius (isolates:3; rSTs:3 tree)
          • Natranaerobius thermophilus (isolates:2; rSTs:2)
          • Natranaerobius trueperi (isolates:1; rSTs:1)
      • Natranaerofabaceae (isolates:1; rSTs:1)
        • Natranaerofaba (isolates:1; rSTs:1)
          • Natranaerofaba carboxydovora (isolates:1; rSTs:1)
    • Peptostreptococcales (isolates:20162; rSTs:1511)
      • Acidaminobacteraceae (isolates:1; rSTs:1)
        • Acidaminobacter (isolates:1; rSTs:1)
          • Acidaminobacter hydrogenoformans (isolates:1; rSTs:1)
      • Anaerovoracaceae (isolates:26; rSTs:19 tree)
        • Alterileibacterium (isolates:1; rSTs:1)
          • Alterileibacterium massiliense (isolates:1; rSTs:1)
        • Aminicella (isolates:1; rSTs:1)
          • Aminicella lysinilytica (isolates:1; rSTs:1)
        • Aminipila (isolates:3; rSTs:3 tree)
          • Aminipila butyrica (isolates:1; rSTs:1)
          • Aminipila luticellarii (isolates:1; rSTs:1)
          • Aminipila terrae (isolates:1; rSTs:1)
        • Anaerovorax (isolates:1; rSTs:1)
          • Anaerovorax odorimutans (isolates:1; rSTs:1)
        • Bacilliculturomica (isolates:1; rSTs:1)
          • Bacilliculturomica massiliensis (isolates:1; rSTs:1)
        • Emergencia (isolates:7; rSTs:3 tree)
          • Emergencia timonensis (isolates:7; rSTs:3 tree)
        • Mobilibacterium (isolates:1; rSTs:1)
          • Mobilibacterium timonense (isolates:1; rSTs:1)
        • Mogibacterium (isolates:11; rSTs:8 tree)
          • Mogibacterium diversum (isolates:1; rSTs:1)
          • Mogibacterium kristiansenii (isolates:1; rSTs:1)
          • Mogibacterium neglectum (isolates:1; rSTs:1)
          • Mogibacterium pumilum (isolates:1; rSTs:1)
          • Mogibacterium sp. (isolates:1; rSTs:1)
          • Mogibacterium timidum (isolates:6; rSTs:3 tree)
      • Caminicellaceae (isolates:5; rSTs:4 tree)
        • Caminicella (isolates:3; rSTs:2)
          • Caminicella sporogenes (isolates:3; rSTs:2)
        • Maledivibacter (isolates:1; rSTs:1)
          • Maledivibacter halophilus (isolates:1; rSTs:1)
        • Paramaledivibacter (isolates:1; rSTs:1)
          • Paramaledivibacter caminithermalis (isolates:1; rSTs:1)
      • Filifactoraceae (isolates:13; rSTs:12 tree)
        • Acetoanaerobium (isolates:3; rSTs:3 tree)
          • Acetoanaerobium noterae (isolates:1; rSTs:1)
          • Acetoanaerobium pronyense (isolates:1; rSTs:1)
          • Acetoanaerobium sticklandii (isolates:1; rSTs:1)
        • Criibacterium (isolates:2; rSTs:2)
          • Criibacterium bergeronii (isolates:2; rSTs:2)
        • Filifactor (isolates:1; rSTs:1)
          • Filifactor alocis (isolates:1; rSTs:1)
        • Peptoanaerobacter (isolates:6; rSTs:5 tree)
          • Peptoanaerobacter stomatis (isolates:4; rSTs:3 tree)
          • [Eubacterium] yurii (isolates:2; rSTs:2)
        • Proteocatella (isolates:1; rSTs:1)
          • Proteocatella sphenisci (isolates:1; rSTs:1)
      • Natronincolaceae (isolates:15; rSTs:14 tree)
        • Alkaliphilus (isolates:10; rSTs:10 tree)
          • Alkaliphilus flagellatus (isolates:1; rSTs:1)
          • Alkaliphilus halophilus (isolates:1; rSTs:1)
          • Alkaliphilus hydrothermalis (isolates:1; rSTs:1)
          • Alkaliphilus metalliredigens (isolates:1; rSTs:1)
          • Alkaliphilus oremlandii (isolates:1; rSTs:1)
          • Alkaliphilus peptidifermentans (isolates:1; rSTs:1)
          • Alkaliphilus pronyensis (isolates:1; rSTs:1)
          • Alkaliphilus serpentinus (isolates:1; rSTs:1)
          • Alkaliphilus sp. (isolates:1; rSTs:1)
          • Alkaliphilus transvaalensis (isolates:1; rSTs:1)
        • Anaerovirgula (isolates:1; rSTs:1)
          • Anaerovirgula multivorans (isolates:1; rSTs:1)
        • Natronincola (isolates:2; rSTs:2)
          • Natronincola ferrireducens (isolates:1; rSTs:1)
          • Natronincola peptidivorans (isolates:1; rSTs:1)
        • Serpentinicella (isolates:2; rSTs:1)
          • Serpentinicella alkaliphila (isolates:2; rSTs:1)
      • Peptoclostridiaceae (isolates:3; rSTs:2)
        • Peptoclostridium (isolates:3; rSTs:2)
          • Peptoclostridium acidaminophilum (isolates:1; rSTs:1)
          • Peptoclostridium litorale (isolates:2; rSTs:1)
      • Peptostreptococcaceae (isolates:20087; rSTs:1448)
        • Asaccharospora (isolates:2; rSTs:1)
          • Asaccharospora irregularis (isolates:2; rSTs:1)
        • Clostridioides (isolates:19851; rSTs:1293)
          • Clostridioides difficile (isolates:19815; rSTs:1264)
          • Clostridioides sp. (isolates:36; rSTs:29 tree)
        • Faecalimicrobium (isolates:2; rSTs:1)
          • Faecalimicrobium dakarense (isolates:2; rSTs:1)
        • Intestinibacter (isolates:27; rSTs:15 tree)
          • Intestinibacter bartlettii (isolates:27; rSTs:15 tree)
        • Mediannikoviicoccus (isolates:1; rSTs:1)
          • Mediannikoviicoccus vaginalis (isolates:1; rSTs:1)
        • Metaclostridioides (isolates:6; rSTs:5 tree)
          • Metaclostridioides mangenotii (isolates:6; rSTs:5 tree)
        • Paeniclostridium (isolates:1; rSTs:1)
          • Paeniclostridium hominis (isolates:1; rSTs:1)
        • Paraclostridium (isolates:96; rSTs:75 tree)
          • Paraclostridium benzoelyticum (isolates:2; rSTs:1)
          • Paraclostridium bifermentans (isolates:20; rSTs:15 tree)
          • Paraclostridium dentum (isolates:1; rSTs:1)
          • Paraclostridium ghonii (isolates:3; rSTs:2)
          • Paraclostridium sordellii (isolates:65; rSTs:46 tree)
          • Paraclostridium sp. (isolates:4; rSTs:9 tree)
          • Paraclostridium tenue (isolates:1; rSTs:1)
        • Peptacetobacter (isolates:4; rSTs:4 tree)
          • Peptacetobacter hiranonis (isolates:3; rSTs:3 tree)
          • Peptacetobacter hominis (isolates:1; rSTs:1)
        • Peptostreptococcus (isolates:42; rSTs:18 tree)
          • Peptostreptococcus anaerobius (isolates:31; rSTs:10 tree)
          • Peptostreptococcus canis (isolates:2; rSTs:1)
          • Peptostreptococcus equinus (isolates:1)
          • Peptostreptococcus faecalis (isolates:1; rSTs:1)
          • Peptostreptococcus porci (isolates:1; rSTs:1)
          • Peptostreptococcus russellii (isolates:3; rSTs:2)
          • Peptostreptococcus sp. (isolates:2; rSTs:2)
          • Peptostreptococcus stomatis (isolates:1; rSTs:1)
        • Romboutsia (isolates:38; rSTs:22 tree)
          • Romboutsia faecis (isolates:1; rSTs:1)
          • Romboutsia hominis (isolates:4; rSTs:3 tree)
          • Romboutsia ilealis (isolates:1; rSTs:1)
          • Romboutsia lituseburensis (isolates:4; rSTs:3 tree)
          • Romboutsia maritimum (isolates:1; rSTs:1)
          • Romboutsia sedimentorum (isolates:2; rSTs:2)
          • Romboutsia sp. (isolates:23; rSTs:9 tree)
          • Romboutsia timonensis (isolates:1; rSTs:1)
          • Romboutsia weinsteinii (isolates:1; rSTs:1)
        • Tepidibacter (isolates:6; rSTs:6 tree)
          • Tepidibacter aestuarii (isolates:1; rSTs:1)
          • Tepidibacter formicigenes (isolates:1; rSTs:1)
          • Tepidibacter hydrothermalis (isolates:1; rSTs:1)
          • Tepidibacter mesophilus (isolates:1; rSTs:1)
          • Tepidibacter sp. (isolates:1; rSTs:1)
          • Tepidibacter thalassicus (isolates:1; rSTs:1)
        • Terrisporobacter (isolates:11; rSTs:6 tree)
          • Terrisporobacter glycolicus (isolates:4; rSTs:1)
          • Terrisporobacter hibernicus (isolates:1; rSTs:1)
          • Terrisporobacter mayombei (isolates:1)
          • Terrisporobacter othiniensis (isolates:3; rSTs:3 tree)
          • Terrisporobacter petrolearius (isolates:2; rSTs:1)
      • Tepidibacteraceae (isolates:3; rSTs:2)
        • Alkalithermobacter (isolates:3; rSTs:2)
          • Alkalithermobacter paradoxus (isolates:1; rSTs:1)
          • Alkalithermobacter thermoalcaliphilus (isolates:2; rSTs:1)
      • Thermotaleaceae (isolates:7; rSTs:7 tree)
        • Anaeromicrobium (isolates:1; rSTs:1)
          • Anaeromicrobium sediminis (isolates:1; rSTs:1)
        • Anaerosolibacter (isolates:1; rSTs:1)
          • Anaerosolibacter carboniphilus (isolates:1; rSTs:1)
        • Geosporobacter (isolates:2; rSTs:2)
          • Geosporobacter ferrireducens (isolates:1; rSTs:1)
          • Geosporobacter subterraneus (isolates:1; rSTs:1)
        • Inediibacterium (isolates:1; rSTs:1)
          • Inediibacterium massiliense (isolates:1; rSTs:1)
        • Marinisporobacter (isolates:1; rSTs:1)
          • Marinisporobacter balticus (isolates:1; rSTs:1)
        • Thermotalea (isolates:1; rSTs:1)
          • Thermotalea metallivorans (isolates:1; rSTs:1)
      • Tindalliaceae (isolates:2; rSTs:2)
        • Tindallia (isolates:2; rSTs:2)
          • Tindallia californiensis (isolates:1; rSTs:1)
          • Tindallia magadiensis (isolates:1; rSTs:1)
    • Thermoanaerobacterales (isolates:68; rSTs:58 tree)
      • Thermoanaerobacteraceae (isolates:66; rSTs:56 tree)
        • Aceticella (isolates:1; rSTs:1)
          • Aceticella autotrophica (isolates:1; rSTs:1)
        • Ammonifex (isolates:2; rSTs:2)
          • Ammonifex degensii (isolates:1; rSTs:1)
          • Ammonifex thiophilus (isolates:1; rSTs:1)
        • Caldanaerobacter (isolates:7; rSTs:5 tree)
          • Caldanaerobacter subterraneus (isolates:7; rSTs:5 tree)
        • Caldanaerobius (isolates:2; rSTs:2)
          • Caldanaerobius fijiensis (isolates:1; rSTs:1)
          • Caldanaerobius polysaccharolyticus (isolates:1; rSTs:1)
        • Calorimonas (isolates:1; rSTs:1)
          • Calorimonas adulescens (isolates:1; rSTs:1)
        • Carboxydothermus (isolates:5; rSTs:4 tree)
          • Carboxydothermus ferrireducens (isolates:2; rSTs:1)
          • Carboxydothermus hydrogenoformans (isolates:1; rSTs:1)
          • Carboxydothermus islandicus (isolates:1; rSTs:1)
          • Carboxydothermus pertinax (isolates:1; rSTs:1)
        • Desulfovirgula (isolates:1; rSTs:1)
          • Desulfovirgula thermocuniculi (isolates:1; rSTs:1)
        • Gelria (isolates:1; rSTs:1)
          • Gelria sp. (isolates:1; rSTs:1)
        • Thermacetogenium (isolates:3; rSTs:1)
          • Thermacetogenium phaeum (isolates:3; rSTs:1)
        • Thermoanaerobacter (isolates:23; rSTs:19 tree)
          • Thermoanaerobacter brockii (isolates:1; rSTs:1)
          • Thermoanaerobacter ethanolicus (isolates:1; rSTs:1)
          • Thermoanaerobacter indiensis (isolates:1; rSTs:1)
          • Thermoanaerobacter italicus (isolates:1; rSTs:1)
          • Thermoanaerobacter kivui (isolates:1; rSTs:1)
          • Thermoanaerobacter mathranii (isolates:1; rSTs:1)
          • Thermoanaerobacter siderophilus (isolates:3; rSTs:1)
          • Thermoanaerobacter sp. (isolates:8; rSTs:8 tree)
          • Thermoanaerobacter thermocopriae (isolates:2; rSTs:1)
          • Thermoanaerobacter thermohydrosulfuricus (isolates:1; rSTs:1)
          • Thermoanaerobacter uzonensis (isolates:1; rSTs:1)
          • Thermoanaerobacter wiegelii (isolates:2; rSTs:1)
        • Thermoanaerobacterium (isolates:19; rSTs:18 tree)
          • Thermoanaerobacterium aotearoense (isolates:2; rSTs:1)
          • Thermoanaerobacterium butyriciformans (isolates:1; rSTs:1)
          • Thermoanaerobacterium saccharolyticum (isolates:1; rSTs:1)
          • Thermoanaerobacterium sp. (isolates:4; rSTs:5 tree)
          • Thermoanaerobacterium thermosaccharolyticum (isolates:10; rSTs:9 tree)
          • Thermoanaerobacterium xylanolyticum (isolates:1; rSTs:1)
        • Thermodesulfitimonas (isolates:1; rSTs:1)
          • Thermodesulfitimonas autotrophica (isolates:1; rSTs:1)
      • Thermoanaerobacterales Family III. Incertae Sedis (isolates:1; rSTs:1 tree)
        • Syntrophaceticus (isolates:1; rSTs:1)
          • Syntrophaceticus schinkii (isolates:1; rSTs:1)
      • Thermoanaerobacterales Family IV. Incertae Sedis (isolates:1; rSTs:1)
        • Mahella (isolates:1; rSTs:1)
          • Mahella australiensis (isolates:1; rSTs:1)
    • Thermosediminibacterales (isolates:12; rSTs:10 tree)
      • Tepidanaerobacteraceae (isolates:6; rSTs:5 tree)
        • Biomaibacter (isolates:1; rSTs:1)
          • Biomaibacter acetigenes (isolates:1; rSTs:1)
        • Tepidanaerobacter (isolates:5; rSTs:4 tree)
          • Tepidanaerobacter acetatoxydans (isolates:2; rSTs:1)
          • Tepidanaerobacter syntrophicus (isolates:3; rSTs:3 tree)
      • Thermosediminibacteraceae (isolates:6; rSTs:5 tree)
        • Caldanaerovirga (isolates:1; rSTs:1)
          • Caldanaerovirga acetigignens (isolates:1; rSTs:1)
        • Fervidicola (isolates:1; rSTs:1)
          • Fervidicola ferrireducens (isolates:1; rSTs:1)
        • Thermosediminibacter (isolates:3; rSTs:2)
          • Thermosediminibacter litoriperuensis (isolates:1; rSTs:1)
          • Thermosediminibacter oceani (isolates:2; rSTs:1)
        • Thermovenabulum (isolates:1; rSTs:1)
          • Thermovenabulum gondwanense (isolates:1; rSTs:1)
  • Culicoidibacteria (isolates:1; rSTs:1)
    • Culicoidibacterales (isolates:1; rSTs:1)
      • Culicoidibacteraceae (isolates:1; rSTs:1)
        • Culicoidibacter (isolates:1; rSTs:1)
          • Culicoidibacter larvae (isolates:1; rSTs:1)
  • Desulfuribacillia (isolates:2; rSTs:2)
    • Desulfuribacillales (isolates:2; rSTs:2)
      • Desulfuribacillaceae (isolates:2; rSTs:2)
        • Desulfuribacillus (isolates:2; rSTs:2)
          • Desulfuribacillus alkaliarsenatis (isolates:1; rSTs:1)
          • Desulfuribacillus stibiiarsenatis (isolates:1; rSTs:1)
  • Dethiobacteria (isolates:3; rSTs:2)
    • Dethiobacterales (isolates:3; rSTs:2)
      • Dethiobacteraceae (isolates:3; rSTs:2)
        • Candidatus Contubernalis (isolates:1)
          • Candidatus Contubernalis alkalaceticus (isolates:1)
        • Dethiobacter (isolates:2; rSTs:2)
          • Dethiobacter alkaliphilus (isolates:2; rSTs:2)
  • Erysipelotrichia (isolates:1143; rSTs:508 tree)
    • Erysipelotrichales (isolates:1143; rSTs:508 tree)
      • Coprobacillaceae (isolates:254; rSTs:142 tree)
        • Catenibacterium (isolates:28; rSTs:21 tree)
          • Catenibacterium faecis (isolates:1; rSTs:1)
          • Catenibacterium mitsuokai (isolates:17; rSTs:10 tree)
          • Catenibacterium sp. (isolates:7; rSTs:7 tree)
          • Catenibacterium tridentinum (isolates:3; rSTs:3 tree)
        • Coprobacillus (isolates:14; rSTs:6 tree)
          • Coprobacillus cateniformis (isolates:14; rSTs:6 tree)
        • Eggerthia (isolates:4; rSTs:3 tree)
          • Eggerthia catenaformis (isolates:4; rSTs:3 tree)
        • Faecalibacillus (isolates:48; rSTs:35 tree)
          • Faecalibacillus faecis (isolates:13; rSTs:8 tree)
          • Faecalibacillus intestinalis (isolates:31; rSTs:24 tree)
          • Faecalibacillus sp. (isolates:4; rSTs:3 tree)
        • Kandleria (isolates:8; rSTs:7 tree)
          • Kandleria vitulina (isolates:8; rSTs:7 tree)
        • Longibaculum (isolates:6; rSTs:5 tree)
          • Longibaculum muris (isolates:6; rSTs:5 tree)
        • Sharpea (isolates:5; rSTs:5 tree)
          • Sharpea azabuensis (isolates:4; rSTs:4 tree)
          • Sharpea porci (isolates:1; rSTs:1)
        • Tannockella (isolates:1; rSTs:1)
          • Tannockella kyphosi (isolates:1; rSTs:1)
        • Thomasclavelia (isolates:140; rSTs:59 tree)
          • Erysipelatoclostridium sp. (isolates:6; rSTs:3 tree)
          • Thomasclavelia cocleata (isolates:5; rSTs:2)
          • Thomasclavelia ramosa (isolates:118; rSTs:47 tree)
          • Thomasclavelia saccharogumia (isolates:3; rSTs:2)
          • Thomasclavelia spiroformis (isolates:8; rSTs:5 tree)
      • Erysipelotrichaceae (isolates:622; rSTs:317 tree)
        • Absicoccus (isolates:2; rSTs:2)
          • Absicoccus porci (isolates:1; rSTs:1)
          • Absicoccus sp. (isolates:1; rSTs:1)
        • Allobaculum (isolates:4; rSTs:3 tree)
          • Allobaculum fili (isolates:1; rSTs:1)
          • Allobaculum mucilyticum (isolates:2; rSTs:1)
          • Allobaculum stercoricanis (isolates:1; rSTs:1)
        • Allocoprobacillus (isolates:1; rSTs:1)
          • Allocoprobacillus halotolerans (isolates:1; rSTs:1)
        • Amedibacillus (isolates:5; rSTs:4 tree)
          • Amedibacillus dolichus (isolates:5; rSTs:4 tree)
        • Amedibacterium (isolates:9; rSTs:8 tree)
          • Absiella sp. (isolates:3; rSTs:3 tree)
          • Amedibacterium intestinale (isolates:6; rSTs:5 tree)
        • Anaerolactibacter (isolates:1; rSTs:1)
          • Anaerolactibacter massiliensis (isolates:1; rSTs:1)
        • Anaerorhabdus (isolates:1; rSTs:1)
          • Anaerorhabdus furcosa (isolates:1; rSTs:1)
        • Beduini (isolates:2; rSTs:1)
          • Beduini massiliensis (isolates:2; rSTs:1)
        • Breznakia (isolates:14; rSTs:6 tree)
          • Breznakia blatticola (isolates:1; rSTs:1)
          • Breznakia pachnodae (isolates:1; rSTs:1)
          • Breznakia sp. (isolates:12; rSTs:4 tree)
        • Bulleidia (isolates:4; rSTs:3 tree)
          • Bulleidia extructa (isolates:1; rSTs:1)
          • Bulleidia sp. (isolates:3; rSTs:2)
        • Candidatus Stoquefichus (isolates:3; rSTs:2)
          • Candidatus Stoquefichus massiliensis (isolates:2; rSTs:1)
          • Candidatus Stoquefichus sp. (isolates:1; rSTs:1)
        • Catenisphaera (isolates:1; rSTs:1)
          • Catenisphaera adipataccumulans (isolates:1; rSTs:1)
        • Copranaerobaculum (isolates:1; rSTs:1)
          • Copranaerobaculum intestinale (isolates:1; rSTs:1)
        • Dielma (isolates:5; rSTs:3 tree)
          • Dielma fastidiosa (isolates:5; rSTs:3 tree)
        • Dubosiella (isolates:2; rSTs:1)
          • Dubosiella muris (isolates:1)
          • Dubosiella newyorkensis (isolates:1; rSTs:1)
        • Erysipelothrix (isolates:240; rSTs:111 tree)
          • Erysipelothrix amsterdamensis (isolates:2; rSTs:1)
          • Erysipelothrix anatis (isolates:4; rSTs:4 tree)
          • Erysipelothrix aquatica (isolates:3; rSTs:2)
          • Erysipelothrix enhydrae (isolates:1; rSTs:1)
          • Erysipelothrix inopinata (isolates:1; rSTs:1)
          • Erysipelothrix larvae (isolates:1; rSTs:1)
          • Erysipelothrix piscisicarius (isolates:2; rSTs:1)
          • Erysipelothrix rhusiopathiae (isolates:220; rSTs:91 tree)
          • Erysipelothrix sp. (isolates:4; rSTs:7 tree)
          • Erysipelothrix tonsillarum (isolates:1; rSTs:1)
          • Erysipelothrix urinaevulpis (isolates:1; rSTs:1)
        • Faecalibaculum (isolates:4; rSTs:4 tree)
          • Faecalibaculum rodentium (isolates:4; rSTs:4 tree)
        • Faecalicoccus (isolates:20; rSTs:7 tree)
          • Faecalicoccus acidiformans (isolates:3; rSTs:1)
          • Faecalicoccus pleomorphus (isolates:17; rSTs:6 tree)
        • Faecalitalea (isolates:21; rSTs:7 tree)
          • Faecalitalea cylindroides (isolates:21; rSTs:7 tree)
        • Floccifex (isolates:1; rSTs:1)
          • Floccifex porci (isolates:1; rSTs:1)
        • Galactobacillus (isolates:1; rSTs:1)
          • Galactobacillus timonensis (isolates:1; rSTs:1)
        • Holdemanella (isolates:33; rSTs:13 tree)
          • Holdemanella biformis (isolates:22; rSTs:7 tree)
          • Holdemanella porci (isolates:8; rSTs:4 tree)
          • Holdemanella sp. (isolates:3; rSTs:2)
        • Holdemania (isolates:16; rSTs:10 tree)
          • Holdemania filiformis (isolates:5; rSTs:4 tree)
          • Holdemania massiliensis (isolates:8; rSTs:3 tree)
          • Holdemania sp. (isolates:3; rSTs:3 tree)
        • Ileibacterium (isolates:1; rSTs:1)
          • Ileibacterium valens (isolates:1; rSTs:1)
        • Intestinibaculum (isolates:1; rSTs:1)
          • Intestinibaculum porci (isolates:1; rSTs:1)
        • Lactimicrobium (isolates:1)
          • Lactimicrobium massiliense (isolates:1)
        • Longicatena (isolates:33; rSTs:10 tree)
          • Longicatena caecimuris (isolates:19; rSTs:10 tree)
          • Longicatena sp. (isolates:14)
        • Massilicoli (isolates:2; rSTs:2)
          • Massilicoli timonensis (isolates:2; rSTs:2)
        • Massilimicrobiota (isolates:10; rSTs:9 tree)
          • Massilimicrobiota sp. (isolates:7; rSTs:7 tree)
          • Massilimicrobiota timonensis (isolates:3; rSTs:2)
        • Merdibacter (isolates:1; rSTs:1)
          • Merdibacter massiliensis (isolates:1; rSTs:1)
        • Solobacterium (isolates:10; rSTs:6 tree)
          • Solobacterium moorei (isolates:10; rSTs:6 tree)
        • Stecheria (isolates:1; rSTs:1)
          • Stecheria intestinalis (isolates:1; rSTs:1)
        • Traorella (isolates:1; rSTs:1)
          • Traorella massiliensis (isolates:1; rSTs:1)
      • Turicibacteraceae (isolates:267; rSTs:49 tree)
        • Turicibacter (isolates:267; rSTs:49 tree)
          • Turicibacter bilis (isolates:8; rSTs:5 tree)
          • Turicibacter faecis (isolates:1; rSTs:1)
          • Turicibacter sanguinis (isolates:248; rSTs:32 tree)
          • Turicibacter sp. (isolates:10; rSTs:11 tree)
  • Limnochordia (isolates:1; rSTs:1)
    • Limnochordales (isolates:1; rSTs:1)
      • Limnochordaceae (isolates:1; rSTs:1)
        • Limnochorda (isolates:1; rSTs:1)
          • Limnochorda pilosa (isolates:1; rSTs:1)
  • Negativicutes (isolates:479; rSTs:363 tree)
    • Acidaminococcales (isolates:75; rSTs:45 tree)
      • Acidaminococcaceae (isolates:75; rSTs:45 tree)
        • Acidaminococcus (isolates:33; rSTs:24 tree)
          • Acidaminococcus fermentans (isolates:8; rSTs:6 tree)
          • Acidaminococcus hominis (isolates:1; rSTs:1)
          • Acidaminococcus intestini (isolates:13; rSTs:7 tree)
          • Acidaminococcus massiliensis (isolates:3; rSTs:2)
          • Acidaminococcus provencensis (isolates:1; rSTs:1)
          • Acidaminococcus sp. (isolates:6; rSTs:6 tree)
          • Acidaminococcus timonensis (isolates:1; rSTs:1)
        • Phascolarctobacterium (isolates:39; rSTs:18 tree)
          • Phascolarctobacterium faecium (isolates:33; rSTs:13 tree)
          • Phascolarctobacterium sp. (isolates:2; rSTs:2)
          • Phascolarctobacterium succinatutens (isolates:4; rSTs:3 tree)
        • Succiniclasticum (isolates:2; rSTs:2)
          • Succiniclasticum ruminis (isolates:2; rSTs:2)
        • Succinispira (isolates:1; rSTs:1)
          • Succinispira mobilis (isolates:1; rSTs:1)
    • Selenomonadales (isolates:166; rSTs:132 tree)
      • Selenomonadaceae (isolates:127; rSTs:103 tree)
        • Anaerovibrio (isolates:6; rSTs:5 tree)
          • Anaerovibrio lipolyticus (isolates:3; rSTs:2)
          • Anaerovibrio slackiae (isolates:1; rSTs:1)
          • Anaerovibrio sp. (isolates:2; rSTs:2)
        • Centipeda (isolates:1; rSTs:1)
          • Centipeda periodontii (isolates:1; rSTs:1)
        • Megamonas (isolates:32; rSTs:24 tree)
          • Megamonas funiformis (isolates:20; rSTs:13 tree)
          • Megamonas hypermegale (isolates:5; rSTs:5 tree)
          • Megamonas rupellensis (isolates:6; rSTs:5 tree)
          • Megamonas sp. (isolates:1; rSTs:1)
        • Mitsuokella (isolates:18; rSTs:14 tree)
          • Mitsuokella jalaludinii (isolates:7; rSTs:5 tree)
          • Mitsuokella multacida (isolates:9; rSTs:7 tree)
          • Mitsuokella sp. (isolates:2; rSTs:2)
        • Pectinatus (isolates:16; rSTs:13 tree)
          • Pectinatus brassicae (isolates:2; rSTs:1)
          • Pectinatus cerevisiiphilus (isolates:2; rSTs:1)
          • Pectinatus frisingensis (isolates:9; rSTs:8 tree)
          • Pectinatus haikarae (isolates:2; rSTs:2)
          • Pectinatus sottacetonis (isolates:1; rSTs:1)
        • Propionispira (isolates:2; rSTs:2)
          • Propionispira arboris (isolates:1; rSTs:1)
          • Propionispira raffinosivorans (isolates:1; rSTs:1)
        • Schwartzia (isolates:1; rSTs:1)
          • Schwartzia succinivorans (isolates:1; rSTs:1)
        • Selenobaculum (isolates:1; rSTs:1)
          • Selenobaculum gibii (isolates:1; rSTs:1)
        • Selenomonas (isolates:50; rSTs:42 tree)
          • Selenomonas artemidis (isolates:2; rSTs:2)
          • Selenomonas bovis (isolates:4; rSTs:3 tree)
          • Selenomonas caprae (isolates:1; rSTs:1)
          • Selenomonas dianae (isolates:2; rSTs:1)
          • Selenomonas felix (isolates:1; rSTs:1)
          • Selenomonas flueggei (isolates:1; rSTs:1)
          • Selenomonas infelix (isolates:1; rSTs:1)
          • Selenomonas massiliensis (isolates:1; rSTs:1)
          • Selenomonas montiformis (isolates:1; rSTs:1)
          • Selenomonas noxia (isolates:3; rSTs:3 tree)
          • Selenomonas ruminantium (isolates:8; rSTs:8 tree)
          • Selenomonas ruminis (isolates:1; rSTs:1)
          • Selenomonas sp. (isolates:16; rSTs:14 tree)
          • Selenomonas sputigena (isolates:7; rSTs:3 tree)
          • Selenomonas timonae (isolates:1; rSTs:1)
      • Sporomusaceae (isolates:39; rSTs:29 tree)
        • Acetonema (isolates:1; rSTs:1)
          • Acetonema longum (isolates:1; rSTs:1)
        • Anaeroarcus (isolates:1; rSTs:1)
          • Anaeroarcus burkinensis (isolates:1; rSTs:1)
        • Anaeromusa (isolates:1; rSTs:1)
          • Anaeromusa acidaminophila (isolates:1; rSTs:1)
        • Anaerospora (isolates:1; rSTs:1)
          • Anaerospora hongkongensis (isolates:1; rSTs:1)
        • Anaerosporomusa (isolates:1; rSTs:1)
          • Anaerosporomusa subterranea (isolates:1; rSTs:1)
        • Azotosporobacter (isolates:1)
          • Azotosporobacter soli (isolates:1)
        • Dendrosporobacter (isolates:2; rSTs:1)
          • Dendrosporobacter quercicolus (isolates:2; rSTs:1)
        • Methylomusa (isolates:1; rSTs:1)
          • Methylomusa anaerophila (isolates:1; rSTs:1)
        • Pelorhabdus (isolates:1; rSTs:1)
          • Pelorhabdus rhamnosifermentans (isolates:1; rSTs:1)
        • Pelosinus (isolates:11; rSTs:7 tree)
          • Pelosinus baikalensis (isolates:1; rSTs:1)
          • Pelosinus fermentans (isolates:6; rSTs:2 tree)
          • Pelosinus propionicus (isolates:1; rSTs:1)
          • Pelosinus sp. (isolates:3; rSTs:3 tree)
        • Propionispora (isolates:3; rSTs:3 tree)
          • Propionispora hippei (isolates:1; rSTs:1)
          • Propionispora sp. (isolates:1; rSTs:1)
          • Propionispora vibrioides (isolates:1; rSTs:1)
        • Sporolituus (isolates:1; rSTs:1)
          • Sporolituus thermophilus (isolates:1; rSTs:1)
        • Sporomusa (isolates:13; rSTs:9 tree)
          • Sporomusa acidovorans (isolates:2; rSTs:1)
          • Sporomusa malonica (isolates:1; rSTs:1)
          • Sporomusa ovata (isolates:3; rSTs:1)
          • Sporomusa silvacetica (isolates:1; rSTs:1)
          • Sporomusa sp. (isolates:2; rSTs:2)
          • Sporomusa sphaeroides (isolates:3; rSTs:2)
          • Sporomusa termitida (isolates:1; rSTs:1)
        • Thermosinus (isolates:1; rSTs:1)
          • Thermosinus carboxydivorans (isolates:1; rSTs:1)
    • Veillonellales (isolates:238; rSTs:186 tree)
      • Veillonellaceae (isolates:238; rSTs:186 tree)
        • Allisonella (isolates:4; rSTs:3 tree)
          • Allisonella histaminiformans (isolates:4; rSTs:3 tree)
        • Anaeroglobus (isolates:1; rSTs:1)
          • Anaeroglobus geminatus (isolates:1; rSTs:1)
        • Colibacter (isolates:2; rSTs:1)
          • Colibacter massiliensis (isolates:2; rSTs:1)
        • Dialister (isolates:19; rSTs:15 tree)
          • Dialister hominis (isolates:2; rSTs:2)
          • Dialister invisus (isolates:4; rSTs:3 tree)
          • Dialister massiliensis (isolates:1; rSTs:1)
          • Dialister micraerophilus (isolates:4; rSTs:4 tree)
          • Dialister pneumosintes (isolates:2; rSTs:2)
          • Dialister sp. (isolates:3; rSTs:1)
          • Dialister succinatiphilus (isolates:3; rSTs:2)
        • Lucifera (isolates:1; rSTs:1)
          • Lucifera butyrica (isolates:1; rSTs:1)
        • Massilibacillus (isolates:1; rSTs:1)
          • Massilibacillus massiliensis (isolates:1; rSTs:1)
        • Megasphaera (isolates:66; rSTs:47 tree)
          • Megasphaera butyrica (isolates:1; rSTs:1)
          • Megasphaera cerevisiae (isolates:3; rSTs:2)
          • Megasphaera elsdenii (isolates:20; rSTs:14 tree)
          • Megasphaera genomosp. type_1 (isolates:1; rSTs:1)
          • Megasphaera genomosp. type_2 (isolates:1; rSTs:1)
          • Megasphaera hexanoica (isolates:2; rSTs:2)
          • Megasphaera hominis (isolates:1; rSTs:1)
          • Megasphaera hutchinsoni (isolates:1; rSTs:1)
          • Megasphaera intestinihominis (isolates:1; rSTs:1)
          • Megasphaera lornae (isolates:1; rSTs:1)
          • Megasphaera massiliensis (isolates:14; rSTs:5 tree)
          • Megasphaera micronuciformis (isolates:2; rSTs:2)
          • Megasphaera paucivorans (isolates:1; rSTs:1)
          • Megasphaera sp. (isolates:14; rSTs:11 tree)
          • Megasphaera stantonii (isolates:1; rSTs:1)
          • Megasphaera vaginalis (isolates:2; rSTs:2)
        • Negativicoccus (isolates:2; rSTs:2)
          • Negativicoccus massiliensis (isolates:1; rSTs:1)
          • Negativicoccus succinicivorans (isolates:1; rSTs:1)
        • Veillonella (isolates:142; rSTs:115 tree)
          • Veillonella agrestimuris (isolates:1; rSTs:1)
          • Veillonella atypica (isolates:25; rSTs:20 tree)
          • Veillonella caviae (isolates:1; rSTs:1)
          • Veillonella criceti (isolates:1; rSTs:1)
          • Veillonella denticariosi (isolates:2; rSTs:2)
          • Veillonella dispar (isolates:2; rSTs:1)
          • Veillonella faecalis (isolates:1; rSTs:1)
          • Veillonella fallax (isolates:2; rSTs:1)
          • Veillonella hominis (isolates:1; rSTs:1)
          • Veillonella infantium (isolates:1; rSTs:1)
          • Veillonella intestinalis (isolates:2; rSTs:2)
          • Veillonella magna (isolates:3; rSTs:2)
          • Veillonella montpellierensis (isolates:3; rSTs:2)
          • Veillonella nakazawae (isolates:4; rSTs:4 tree)
          • Veillonella parvula (isolates:39; rSTs:27 tree)
          • Veillonella ratti (isolates:8; rSTs:2)
          • Veillonella rodentium (isolates:1; rSTs:1)
          • Veillonella rogosae (isolates:4; rSTs:3 tree)
          • Veillonella seminalis (isolates:4; rSTs:2)
          • Veillonella sp. (isolates:33; rSTs:36 tree)
          • Veillonella tobetsuensis (isolates:4; rSTs:4 tree)
  • Tissierellia (isolates:282; rSTs:234 tree)
    • Tissierellales (isolates:270; rSTs:222 tree)
      • Acidilutibacteraceae (isolates:1; rSTs:1)
        • Acidilutibacter (isolates:1; rSTs:1)
          • Acidilutibacter cellobiosedens (isolates:1; rSTs:1)
      • Gottschalkiaceae (isolates:3; rSTs:3 tree)
        • Andreesenia (isolates:1; rSTs:1)
          • Andreesenia angusta (isolates:1; rSTs:1)
        • Gottschalkia (isolates:2; rSTs:2)
          • Gottschalkia acidurici (isolates:1; rSTs:1)
          • Gottschalkia purinilytica (isolates:1; rSTs:1)
      • Peptoniphilaceae (isolates:224; rSTs:180 tree)
        • Aedoeadaptatus (isolates:5; rSTs:5 tree)
          • Aedoeadaptatus acetigenes (isolates:2; rSTs:2)
          • Aedoeadaptatus coli (isolates:1; rSTs:1)
          • Aedoeadaptatus pacaensis (isolates:1; rSTs:1)
          • Aedoeadaptatus urinae (isolates:1; rSTs:1)
        • Anaerococcus (isolates:53; rSTs:48 tree)
          • Anaerococcus degeneri (isolates:2; rSTs:1)
          • Anaerococcus faecalis (isolates:1; rSTs:1)
          • Anaerococcus hydrogenalis (isolates:7; rSTs:4 tree)
          • Anaerococcus ihuae (isolates:1; rSTs:1)
          • Anaerococcus jeddahensis (isolates:1; rSTs:1)
          • Anaerococcus lactolyticus (isolates:3; rSTs:2)
          • Anaerococcus marasmi (isolates:1; rSTs:1)
          • Anaerococcus mediterraneensis (isolates:1; rSTs:1)
          • Anaerococcus murdochii (isolates:2; rSTs:2)
          • Anaerococcus nagyae (isolates:3; rSTs:3 tree)
          • Anaerococcus obesiensis (isolates:2; rSTs:1)
          • Anaerococcus octavius (isolates:2; rSTs:2)
          • Anaerococcus porci (isolates:1; rSTs:1)
          • Anaerococcus prevotii (isolates:2; rSTs:1)
          • Anaerococcus provencensis (isolates:1; rSTs:1)
          • Anaerococcus rubeinfantis (isolates:2; rSTs:1)
          • Anaerococcus senegalensis (isolates:2; rSTs:2)
          • Anaerococcus sp. (isolates:12; rSTs:16 tree)
          • Anaerococcus tetradius (isolates:2; rSTs:2)
          • Anaerococcus urinomassiliensis (isolates:1; rSTs:1)
          • Anaerococcus vaginalis (isolates:3; rSTs:2)
          • Anaerococcus vaginimassiliensis (isolates:1; rSTs:1)
        • Anaerosphaera (isolates:3; rSTs:3 tree)
          • Anaerosphaera aminiphila (isolates:1; rSTs:1)
          • Anaerosphaera massiliensis (isolates:1; rSTs:1)
          • Anaerosphaera multitolerans (isolates:1; rSTs:1)
        • Finegoldia (isolates:36; rSTs:28 tree)
          • Finegoldia magna (isolates:31; rSTs:25 tree)
          • Finegoldia sp. (isolates:5; rSTs:3 tree)
        • Helcococcus (isolates:11; rSTs:8 tree)
          • Helcococcus kunzii (isolates:5; rSTs:4 tree)
          • Helcococcus massiliensis (isolates:1; rSTs:1)
          • Helcococcus ovis (isolates:4; rSTs:2)
          • Helcococcus sueciensis (isolates:1; rSTs:1)
        • Khoudiadiopia (isolates:1; rSTs:1)
          • Khoudiadiopia massiliensis (isolates:1; rSTs:1)
        • Lagierella (isolates:2; rSTs:1)
          • Lagierella massiliensis (isolates:2; rSTs:1)
        • Miniphocaeibacter (isolates:2; rSTs:2)
          • Miniphocaeibacter halophilus (isolates:1; rSTs:1)
          • Miniphocaeibacter massiliensis (isolates:1; rSTs:1)
        • Murdochiella (isolates:5; rSTs:3 tree)
          • Murdochiella massiliensis (isolates:2; rSTs:1)
          • Murdochiella sp. (isolates:1; rSTs:1)
          • Murdochiella vaginalis (isolates:2; rSTs:1)
        • Parvimonas (isolates:42; rSTs:26 tree)
          • Parvimonas micra (isolates:32; rSTs:18 tree)
          • Parvimonas parva (isolates:1; rSTs:1)
          • Parvimonas sp. (isolates:9; rSTs:7 tree)
        • Peptoniphilus (isolates:61; rSTs:52 tree)
          • Peptoniphilus asaccharolyticus (isolates:2; rSTs:1)
          • Peptoniphilus catoniae (isolates:1; rSTs:1)
          • Peptoniphilus coxii (isolates:2; rSTs:2)
          • Peptoniphilus duerdenii (isolates:2; rSTs:2)
          • Peptoniphilus faecalis (isolates:2; rSTs:2)
          • Peptoniphilus genitalis (isolates:2; rSTs:1)
          • Peptoniphilus gorbachii (isolates:2; rSTs:2)
          • Peptoniphilus grossensis (isolates:3; rSTs:1)
          • Peptoniphilus harei (isolates:4; rSTs:2)
          • Peptoniphilus hominis (isolates:1; rSTs:1)
          • Peptoniphilus indolicus (isolates:2; rSTs:1)
          • Peptoniphilus ivorii (isolates:2; rSTs:2)
          • Peptoniphilus koenoeneniae (isolates:1; rSTs:1)
          • Peptoniphilus lacrimalis (isolates:8; rSTs:6 tree)
          • Peptoniphilus lacydonensis (isolates:1; rSTs:1)
          • Peptoniphilus mikwangii (isolates:1; rSTs:1)
          • Peptoniphilus nemausensis (isolates:1; rSTs:1)
          • Peptoniphilus obesi (isolates:2; rSTs:1)
          • Peptoniphilus olsenii (isolates:1; rSTs:1)
          • Peptoniphilus ovalis (isolates:1; rSTs:1)
          • Peptoniphilus phoceensis (isolates:2; rSTs:1)
          • Peptoniphilus rachelemmaiella (isolates:1; rSTs:1)
          • Peptoniphilus raoultii (isolates:1; rSTs:1)
          • Peptoniphilus rhinitidis (isolates:1; rSTs:1)
          • Peptoniphilus senegalensis (isolates:2; rSTs:1)
          • Peptoniphilus sp. (isolates:9; rSTs:12 tree)
          • Peptoniphilus stercorisuis (isolates:1; rSTs:1)
          • Peptoniphilus timonensis (isolates:1; rSTs:1)
          • Peptoniphilus tyrrelliae (isolates:1; rSTs:1)
          • Peptoniphilus vaginalis (isolates:1; rSTs:1)
        • Urinicoccus (isolates:3; rSTs:3 tree)
          • Urinicoccus massiliensis (isolates:2; rSTs:2)
          • Urinicoccus timonensis (isolates:1; rSTs:1)
      • Sporanaerobacteraceae (isolates:10; rSTs:8 tree)
        • Anaerosalibacter (isolates:8; rSTs:6 tree)
          • Anaerosalibacter bizertensis (isolates:5; rSTs:4 tree)
          • Anaerosalibacter massiliensis (isolates:3; rSTs:2)
        • Sporanaerobacter (isolates:2; rSTs:2)
          • Sporanaerobacter acetigenes (isolates:2; rSTs:2)
      • Tepidimicrobiaceae (isolates:7; rSTs:6 tree)
        • Keratinibaculum (isolates:2; rSTs:1)
          • Keratinibaculum paraultunense (isolates:2; rSTs:1)
        • Schnuerera (isolates:3; rSTs:3 tree)
          • Schnuerera sp. (isolates:1; rSTs:1)
          • Schnuerera ultunensis (isolates:2; rSTs:2)
        • Tepidimicrobium (isolates:2; rSTs:2)
          • Tepidimicrobium xylanilyticum (isolates:2; rSTs:2)
      • Thermohalobacteraceae (isolates:9; rSTs:9 tree)
        • Caldisalinibacter (isolates:1; rSTs:1)
          • Caldisalinibacter kiritimatiensis (isolates:1; rSTs:1)
        • Caloranaerobacter (isolates:5; rSTs:5 tree)
          • Caloranaerobacter azorensis (isolates:3; rSTs:3 tree)
          • Caloranaerobacter ferrireducens (isolates:1; rSTs:1)
          • Caloranaerobacter sp. (isolates:1; rSTs:1)
        • Clostridiisalibacter (isolates:1; rSTs:1)
          • Clostridiisalibacter paucivorans (isolates:1; rSTs:1)
        • Sporosalibacterium (isolates:1; rSTs:1)
          • Sporosalibacterium faouarense (isolates:1; rSTs:1)
        • Thermohalobacter (isolates:1; rSTs:1)
          • Thermohalobacter berrensis (isolates:1; rSTs:1)
      • Tissierellaceae (isolates:16; rSTs:15 tree)
        • Gudongella (isolates:1; rSTs:1)
          • Gudongella oleilytica (isolates:1; rSTs:1)
        • Paratissierella (isolates:1; rSTs:1)
          • Paratissierella segnis (isolates:1; rSTs:1)
        • Soehngenia (isolates:1; rSTs:1)
          • Soehngenia longivitae (isolates:1; rSTs:1)
        • Tissierella (isolates:12; rSTs:11 tree)
          • Tissierella carlieri (isolates:2; rSTs:2)
          • Tissierella creatinophila (isolates:1; rSTs:1)
          • Tissierella pigra (isolates:2; rSTs:2)
          • Tissierella praeacuta (isolates:4; rSTs:3 tree)
          • Tissierella simiarum (isolates:1; rSTs:1)
          • Tissierella sp. (isolates:2; rSTs:2)
        • Urmitella (isolates:1; rSTs:1)
          • Urmitella timonensis (isolates:1; rSTs:1)
• Bacteroidota (isolates:12183; rSTs:6850)
  • Bacteroidia (isolates:6469; rSTs:2863)
    • Bacteroidales (isolates:6377; rSTs:2785)
      • Bacteroidaceae (isolates:4354; rSTs:1655)
        • Bacteroides (isolates:3345; rSTs:1265 tree)
          • Bacteroides acidifaciens (isolates:39; rSTs:12 tree)
          • Bacteroides bouchesdurhonensis (isolates:3; rSTs:3 tree)
          • Bacteroides caccae (isolates:145; rSTs:55 tree)
          • Bacteroides caecicola (isolates:2; rSTs:2)
          • Bacteroides caecigallinarum (isolates:8; rSTs:7 tree)
          • Bacteroides caecimuri (isolates:1; rSTs:1)
          • Bacteroides caecimuris (isolates:5; rSTs:2)
          • Bacteroides cellulosilyticus (isolates:134; rSTs:42 tree)
          • Bacteroides clarus (isolates:14; rSTs:11 tree)
          • Bacteroides congonensis (isolates:3; rSTs:3 tree)
          • Bacteroides coprosuis (isolates:1; rSTs:1)
          • Bacteroides cutis (isolates:2; rSTs:2)
          • Bacteroides eggerthii (isolates:60; rSTs:22 tree)
          • Bacteroides faecalis (isolates:1)
          • Bacteroides faecichinchillae (isolates:3; rSTs:2)
          • Bacteroides faecis (isolates:76; rSTs:25 tree)
          • Bacteroides faecium (isolates:1; rSTs:1)
          • Bacteroides finegoldii (isolates:33; rSTs:13 tree)
          • Bacteroides fluxus (isolates:2; rSTs:1)
          • Bacteroides fragilis (isolates:727; rSTs:239 tree)
          • Bacteroides gallinaceum (isolates:6; rSTs:6 tree)
          • Bacteroides gallinarum (isolates:1; rSTs:1)
          • Bacteroides graminisolvens (isolates:1; rSTs:1)
          • Bacteroides helcogenes (isolates:1; rSTs:1)
          • Bacteroides heparinolyticus (isolates:4; rSTs:4 tree)
          • Bacteroides hominis (isolates:17; rSTs:13 tree)
          • Bacteroides humanifaecis (isolates:3; rSTs:2)
          • Bacteroides ihuae (isolates:1; rSTs:1)
          • Bacteroides ilei (isolates:1; rSTs:1)
          • Bacteroides intestinalis (isolates:49; rSTs:24 tree)
          • Bacteroides luhongzhouii (isolates:2; rSTs:1)
          • Bacteroides luti (isolates:1; rSTs:1)
          • Bacteroides mediterraneensis (isolates:4; rSTs:4 tree)
          • Bacteroides muris (isolates:2; rSTs:2)
          • Bacteroides muris (ex Afrizal et al. 2022) (isolates:1; rSTs:1)
          • Bacteroides ndongoniae (isolates:1; rSTs:1)
          • Bacteroides neonati (isolates:2; rSTs:1)
          • Bacteroides nordii (isolates:18; rSTs:14 tree)
          • Bacteroides oleiciplenus (isolates:3; rSTs:2)
          • Bacteroides ovatus (isolates:502; rSTs:118 tree)
          • Bacteroides propionicifaciens (isolates:1; rSTs:1)
          • Bacteroides propionicigenes (isolates:1; rSTs:1)
          • Bacteroides pyogenes (isolates:26; rSTs:11 tree)
          • Bacteroides reticulotermitis (isolates:2; rSTs:2)
          • Bacteroides rodentium (isolates:1; rSTs:1)
          • Bacteroides salyersiae (isolates:59; rSTs:17 tree)
          • Bacteroides sedimenti (isolates:1; rSTs:1)
          • Bacteroides sp. (isolates:119; rSTs:149 tree)
          • Bacteroides stercorirosoris (isolates:4; rSTs:2)
          • Bacteroides stercoris (isolates:99; rSTs:49 tree)
          • Bacteroides thetaiotaomicron (isolates:567; rSTs:169 tree)
          • Bacteroides timonensis (isolates:1; rSTs:1)
          • Bacteroides togonis (isolates:1; rSTs:1)
          • Bacteroides uniformis (isolates:372; rSTs:136 tree)
          • Bacteroides xylanisolvens (isolates:200; rSTs:72 tree)
          • Bacteroides zhangwenhongii (isolates:4; rSTs:4 tree)
          • Bacteroides zoogleoformans (isolates:2; rSTs:1)
          • Candidatus Bacteroides intestinigallinarum (isolates:5; rSTs:4 tree)
        • Caecibacteroides (isolates:3; rSTs:2)
          • Caecibacteroides pullorum (isolates:3; rSTs:2)
        • Jilunia (isolates:1; rSTs:1)
          • Jilunia laotingensis (isolates:1; rSTs:1)
        • Mediterranea (isolates:3; rSTs:3 tree)
          • Mediterranea massiliensis (isolates:2; rSTs:2)
          • Mediterranea sp. (isolates:1; rSTs:1)
        • Phocaeicola (isolates:1002; rSTs:384 tree)
          • Phocaeicola abscessus (isolates:1; rSTs:1)
          • Phocaeicola acetigenes (isolates:1; rSTs:1)
          • Phocaeicola barnesiae (isolates:10; rSTs:8 tree)
          • Phocaeicola coprocola (isolates:17; rSTs:10 tree)
          • Phocaeicola coprophilus (isolates:8; rSTs:3 tree)
          • Phocaeicola dorei (isolates:184; rSTs:56 tree)
          • Phocaeicola faecalis (isolates:1; rSTs:1)
          • Phocaeicola faecicola (isolates:1; rSTs:1)
          • Phocaeicola massiliensis (isolates:44; rSTs:24 tree)
          • Phocaeicola oris (isolates:1; rSTs:1)
          • Phocaeicola paurosaccharolyticus (isolates:1; rSTs:1)
          • Phocaeicola plebeius (isolates:35; rSTs:26 tree)
          • Phocaeicola salanitronis (isolates:1; rSTs:1)
          • Phocaeicola sartorii (isolates:7; rSTs:6 tree)
          • Phocaeicola sp. (isolates:4; rSTs:3 tree)
          • Phocaeicola vulgatus (isolates:686; rSTs:241 tree)
      • Balneicellaceae (isolates:1; rSTs:1)
        • Balneicella (isolates:1; rSTs:1)
          • Balneicella halophila (isolates:1; rSTs:1)
      • Barnesiellaceae (isolates:39; rSTs:31 tree)
        • Barnesiella (isolates:28; rSTs:19 tree)
          • Barnesiella intestinihominis (isolates:21; rSTs:12 tree)
          • Barnesiella propionica (isolates:1; rSTs:1)
          • Barnesiella sp. (isolates:5; rSTs:5 tree)
          • Barnesiella viscericola (isolates:1; rSTs:1)
        • Coprobacter (isolates:11; rSTs:12 tree)
          • Coprobacter fastidiosus (isolates:7; rSTs:8 tree)
          • Coprobacter secundus (isolates:3; rSTs:3 tree)
          • Coprobacter tertius (isolates:1; rSTs:1)
      • Dysgonomonadaceae (isolates:39; rSTs:37 tree)
        • Dysgonomonas (isolates:32; rSTs:30 tree)
          • Dysgonomonas alginatilytica (isolates:1; rSTs:1)
          • Dysgonomonas capnocytophagoides (isolates:3; rSTs:3 tree)
          • Dysgonomonas gadei (isolates:2; rSTs:1)
          • Dysgonomonas hofstadii (isolates:2; rSTs:2)
          • Dysgonomonas macrotermitis (isolates:2; rSTs:1)
          • Dysgonomonas massiliensis (isolates:1; rSTs:1)
          • Dysgonomonas mossii (isolates:6; rSTs:3 tree)
          • Dysgonomonas sp. (isolates:15; rSTs:18 tree)
        • Petrimonas (isolates:1; rSTs:1)
          • Petrimonas mucosa (isolates:1; rSTs:1)
        • Proteiniphilum (isolates:4; rSTs:4 tree)
          • Proteiniphilum acetatigenes (isolates:1; rSTs:1)
          • Proteiniphilum propionicum (isolates:1; rSTs:1)
          • Proteiniphilum saccharofermentans (isolates:1; rSTs:1)
          • Proteiniphilum sp. (isolates:1; rSTs:1)
        • Seramator (isolates:2; rSTs:2)
          • Seramator thermalis (isolates:2; rSTs:2)
      • Lentimicrobiaceae (isolates:1; rSTs:1)
        • Lentimicrobium (isolates:1; rSTs:1)
          • Lentimicrobium saccharophilum (isolates:1; rSTs:1)
      • Muribaculaceae (isolates:32; rSTs:21 tree)
        • Candidatus Homeothermus (isolates:1; rSTs:1)
          • Candidatus Homeothermus arabinoxylanisolvens (isolates:1; rSTs:1)
        • Duncaniella (isolates:8; rSTs:6 tree)
          • Duncaniella dubosii (isolates:1; rSTs:1)
          • Duncaniella freteri (isolates:1; rSTs:1)
          • Duncaniella muricolitica (isolates:1; rSTs:1)
          • Duncaniella muris (isolates:3; rSTs:2)
          • Duncaniella sp. (isolates:2; rSTs:1)
        • Heminiphilus (isolates:1; rSTs:1)
          • Heminiphilus faecis (isolates:1; rSTs:1)
        • Lepagella (isolates:1; rSTs:1)
          • Lepagella muris (isolates:1; rSTs:1)
        • Muribaculum (isolates:14; rSTs:7 tree)
          • Muribaculum caecicola (isolates:1)
          • Muribaculum gordoncarteri (isolates:1; rSTs:1)
          • Muribaculum intestinale (isolates:11; rSTs:5 tree)
          • Muribaculum sp. (isolates:1; rSTs:1)
        • Paramuribaculum (isolates:3; rSTs:2)
          • Paramuribaculum intestinale (isolates:3; rSTs:2)
        • Sangeribacter (isolates:2; rSTs:2)
          • Sangeribacter muris (isolates:2; rSTs:2)
        • Sodaliphilus (isolates:2; rSTs:1)
          • Sodaliphilus pleomorphus (isolates:2; rSTs:1)
      • Odoribacteraceae (isolates:106; rSTs:63 tree)
        • Butyricimonas (isolates:41; rSTs:25 tree)
          • Butyricimonas faecalis (isolates:2; rSTs:2)
          • Butyricimonas faecihominis (isolates:9; rSTs:4 tree)
          • Butyricimonas hominis (isolates:1; rSTs:1)
          • Butyricimonas paravirosa (isolates:7; rSTs:4 tree)
          • Butyricimonas sp. (isolates:6; rSTs:4 tree)
          • Butyricimonas synergistica (isolates:3; rSTs:2 tree)
          • Butyricimonas virosa (isolates:13; rSTs:8 tree)
        • Culturomica (isolates:2; rSTs:1)
          • Culturomica massiliensis (isolates:2; rSTs:1)
        • Odoribacter (isolates:63; rSTs:37 tree)
          • Odoribacter laneus (isolates:4; rSTs:3 tree)
          • Odoribacter lunatus (isolates:1; rSTs:1)
          • Odoribacter sp. (isolates:4; rSTs:3 tree)
          • Odoribacter splanchnicus (isolates:54; rSTs:30 tree)
      • Paludibacteraceae (isolates:2; rSTs:2)
        • Paludibacter (isolates:2; rSTs:2)
          • Paludibacter jiangxiensis (isolates:1; rSTs:1)
          • Paludibacter propionicigenes (isolates:1; rSTs:1)
      • Porphyromonadaceae (isolates:191; rSTs:179 tree)
        • Gabonibacter (isolates:1; rSTs:1)
          • Gabonibacter chumensis (isolates:1; rSTs:1)
        • Lascolabacillus (isolates:1; rSTs:1)
          • Lascolabacillus massiliensis (isolates:1; rSTs:1)
        • Massilibacteroides (isolates:1; rSTs:1)
          • Massilibacteroides vaginae (isolates:1; rSTs:1)
        • Microbacter (isolates:1; rSTs:1)
          • Microbacter margulisiae (isolates:1; rSTs:1)
        • Porphyromonas (isolates:182; rSTs:170 tree)
          • Porphyromonas asaccharolytica (isolates:2; rSTs:2)
          • Porphyromonas bennonis (isolates:1; rSTs:1)
          • Porphyromonas bobii (isolates:1; rSTs:1)
          • Porphyromonas cangingivalis (isolates:6; rSTs:4 tree)
          • Porphyromonas canoris (isolates:2; rSTs:2)
          • Porphyromonas catoniae (isolates:2; rSTs:2)
          • Porphyromonas circumdentaria (isolates:2; rSTs:2)
          • Porphyromonas crevioricanis (isolates:6; rSTs:4 tree)
          • Porphyromonas endodontalis (isolates:3; rSTs:1)
          • Porphyromonas gingivalis (isolates:99; rSTs:97 tree)
          • Porphyromonas gingivicanis (isolates:2; rSTs:2)
          • Porphyromonas gulae (isolates:12; rSTs:15 tree)
          • Porphyromonas levii (isolates:20; rSTs:14 tree)
          • Porphyromonas loveana (isolates:1; rSTs:1)
          • Porphyromonas macacae (isolates:7; rSTs:4 tree)
          • Porphyromonas pasteri (isolates:1; rSTs:1)
          • Porphyromonas somerae (isolates:2; rSTs:2)
          • Porphyromonas sp. (isolates:9; rSTs:13 tree)
          • Porphyromonas uenonis (isolates:3; rSTs:1)
          • Porphyromonas vaginalis (isolates:1; rSTs:1)
        • Sanguibacteroides (isolates:5; rSTs:5 tree)
          • Sanguibacteroides justesenii (isolates:4; rSTs:4 tree)
          • Sanguibacteroides sp. (isolates:1; rSTs:1)
      • Prevotellaceae (isolates:602; rSTs:401 tree)
        • Alloprevotella (isolates:7; rSTs:7 tree)
          • Alloprevotella rava (isolates:2; rSTs:2)
          • Alloprevotella tannerae (isolates:5; rSTs:5 tree)
        • Hallella (isolates:9; rSTs:7 tree)
          • Hallella absiana (isolates:2; rSTs:2)
          • Hallella bergensis (isolates:1; rSTs:1)
          • Hallella colorans (isolates:1; rSTs:1)
          • Hallella faecis (isolates:2; rSTs:1)
          • Hallella mizrahii (isolates:1; rSTs:1)
          • Hallella multisaccharivorax (isolates:2; rSTs:1)
        • Hoylesella (isolates:42; rSTs:29 tree)
          • Hoylesella buccalis (isolates:9; rSTs:6 tree)
          • Hoylesella enoeca (isolates:2; rSTs:1)
          • Hoylesella loescheii (isolates:3; rSTs:1)
          • Hoylesella marshii (isolates:2; rSTs:2)
          • Hoylesella nanceiensis (isolates:5; rSTs:4 tree)
          • Hoylesella oralis (isolates:4; rSTs:1)
          • Hoylesella pleuritidis (isolates:2; rSTs:2)
          • Hoylesella saccharolytica (isolates:2; rSTs:2)
          • Hoylesella shahii (isolates:2; rSTs:2)
          • Hoylesella timonensis (isolates:11; rSTs:8 tree)
        • Ihuprevotella (isolates:1; rSTs:1)
          • Ihuprevotella massiliensis (isolates:1; rSTs:1)
        • Leyella (isolates:9; rSTs:8 tree)
          • Leyella lascolaii (isolates:3; rSTs:3 tree)
          • Leyella stercorea (isolates:6; rSTs:5 tree)
        • Marseilla (isolates:1; rSTs:1)
          • Marseilla massiliensis (isolates:1; rSTs:1)
        • Palleniella (isolates:2; rSTs:2)
          • Palleniella intestinalis (isolates:1; rSTs:1)
          • Palleniella muris (isolates:1; rSTs:1)
        • Paraprevotella (isolates:13; rSTs:9 tree)
          • Paraprevotella clara (isolates:10; rSTs:7 tree)
          • Paraprevotella xylaniphila (isolates:3; rSTs:2)
        • Prevotella (isolates:224; rSTs:168 tree)
          • Prevotella amnii (isolates:6; rSTs:5 tree)
          • Prevotella aurantiaca (isolates:1; rSTs:1)
          • Prevotella bivia (isolates:14; rSTs:11 tree)
          • Prevotella brunnea (isolates:2; rSTs:2 tree)
          • Prevotella communis (isolates:8; rSTs:6 tree)
          • Prevotella conceptionensis (isolates:1; rSTs:1)
          • Prevotella corporis (isolates:6; rSTs:4 tree)
          • Prevotella dentalis (isolates:2; rSTs:1)
          • Prevotella dentasini (isolates:1; rSTs:1)
          • Prevotella denticola (isolates:17; rSTs:12 tree)
          • Prevotella disiens (isolates:9; rSTs:5 tree)
          • Prevotella falsenii (isolates:1; rSTs:1)
          • Prevotella fusca (isolates:3; rSTs:2)
          • Prevotella herbatica (isolates:1; rSTs:1)
          • Prevotella histicola (isolates:13; rSTs:8 tree)
          • Prevotella ihumii (isolates:1; rSTs:1)
          • Prevotella illustrans (isolates:1; rSTs:1)
          • Prevotella intermedia (isolates:34; rSTs:26 tree)
          • Prevotella jejuni (isolates:5; rSTs:4 tree)
          • Prevotella koreensis (isolates:1; rSTs:1)
          • Prevotella lacticifex (isolates:11; rSTs:3 tree)
          • Prevotella marseillensis (isolates:1; rSTs:1)
          • Prevotella melaninogenica (isolates:31; rSTs:21 tree)
          • Prevotella merdae (isolates:1; rSTs:1)
          • Prevotella micans (isolates:3; rSTs:1)
          • Prevotella multiformis (isolates:2; rSTs:2)
          • Prevotella nigrescens (isolates:11; rSTs:7 tree)
          • Prevotella pallens (isolates:3; rSTs:2)
          • Prevotella pectinovora (isolates:5; rSTs:4 tree)
          • Prevotella phocaeensis (isolates:1; rSTs:1)
          • Prevotella rectalis (isolates:1; rSTs:1)
          • Prevotella scopos (isolates:4; rSTs:1)
          • Prevotella sp. (isolates:17; rSTs:26 tree)
          • Prevotella veroralis (isolates:5; rSTs:2)
          • Prevotella vespertina (isolates:1; rSTs:1)
        • Prevotellamassilia (isolates:1; rSTs:1)
          • Prevotellamassilia timonensis (isolates:1; rSTs:1)
        • Pseudoprevotella (isolates:1; rSTs:1)
          • Pseudoprevotella muciniphila (isolates:1; rSTs:1)
        • Segatella (isolates:275; rSTs:150 tree)
          • Segatella albensis (isolates:2; rSTs:1)
          • Segatella baroniae (isolates:3; rSTs:2 tree)
          • Segatella bryantii (isolates:8; rSTs:7 tree)
          • Segatella buccae (isolates:7; rSTs:5 tree)
          • Segatella cerevisiae (isolates:1; rSTs:1)
          • Segatella copri (isolates:229; rSTs:116 tree)
          • Segatella hominis (isolates:4; rSTs:4 tree)
          • Segatella maculosa (isolates:3; rSTs:2)
          • Segatella oris (isolates:5; rSTs:3 tree)
          • Segatella oulorum (isolates:3; rSTs:2)
          • Segatella paludivivens (isolates:2; rSTs:1)
          • Segatella salivae (isolates:7; rSTs:5 tree)
          • Segatella sinensis (isolates:1; rSTs:1)
        • Xylanibacter (isolates:17; rSTs:17 tree)
          • Xylanibacter brevis (isolates:2; rSTs:2)
          • Xylanibacter caecicola (isolates:1; rSTs:1)
          • Xylanibacter muris (isolates:1; rSTs:1)
          • Xylanibacter oryzae (isolates:1; rSTs:1)
          • Xylanibacter rarus (isolates:1; rSTs:1)
          • Xylanibacter rodentium (isolates:1; rSTs:1)
          • Xylanibacter ruminicola (isolates:10; rSTs:10 tree)
      • Rikenellaceae (isolates:432; rSTs:115 tree)
        • Acetobacteroides (isolates:1; rSTs:1)
          • Acetobacteroides hydrogenigenes (isolates:1; rSTs:1)
        • Alistipes (isolates:425; rSTs:109 tree)
          • Alistipes communis (isolates:7; rSTs:6 tree)
          • Alistipes dispar (isolates:2; rSTs:2)
          • Alistipes finegoldii (isolates:17; rSTs:11 tree)
          • Alistipes hominis (isolates:1; rSTs:1)
          • Alistipes ihumii (isolates:3; rSTs:1)
          • Alistipes indistinctus (isolates:8; rSTs:5 tree)
          • Alistipes inops (isolates:1; rSTs:1)
          • Alistipes megaguti (isolates:1; rSTs:1)
          • Alistipes montrealensis (isolates:1; rSTs:1)
          • Alistipes muris (isolates:1; rSTs:1)
          • Alistipes onderdonkii (isolates:305; rSTs:29 tree)
          • Alistipes provencensis (isolates:1; rSTs:1)
          • Alistipes putredinis (isolates:14; rSTs:9 tree)
          • Alistipes senegalensis (isolates:7; rSTs:3 tree)
          • Alistipes shahii (isolates:30; rSTs:17 tree)
          • Alistipes sp. (isolates:19; rSTs:17 tree)
          • Alistipes timonensis (isolates:7; rSTs:3 tree)
        • Gallalistipes (isolates:1; rSTs:1)
          • Gallalistipes aquisgranensis (isolates:1; rSTs:1)
        • Millionella (isolates:1; rSTs:1)
          • Millionella massiliensis (isolates:1; rSTs:1)
        • Mucinivorans (isolates:1; rSTs:1)
          • Mucinivorans hirudinis (isolates:1; rSTs:1)
        • Rikenella (isolates:3; rSTs:2)
          • Rikenella microfusus (isolates:2; rSTs:1)
          • Rikenella sp. (isolates:1; rSTs:1)
      • Salinivirgaceae (isolates:1; rSTs:1)
        • Salinivirga (isolates:1; rSTs:1)
          • Salinivirga cyanobacteriivorans (isolates:1; rSTs:1)
      • Tannerellaceae (isolates:570; rSTs:274 tree)
        • Parabacteroides (isolates:551; rSTs:250 tree)
          • Parabacteroides acidifaciens (isolates:2; rSTs:1)
          • Parabacteroides bouchesdurhonensis (isolates:3; rSTs:2)
          • Parabacteroides chartae (isolates:1; rSTs:1)
          • Parabacteroides chinchillae (isolates:1; rSTs:1)
          • Parabacteroides chongii (isolates:1; rSTs:1)
          • Parabacteroides distasonis (isolates:286; rSTs:123 tree)
          • Parabacteroides faecalis (isolates:1; rSTs:1)
          • Parabacteroides faecis (isolates:5; rSTs:3 tree)
          • Parabacteroides goldsteinii (isolates:36; rSTs:16 tree)
          • Parabacteroides gordonii (isolates:5; rSTs:2)
          • Parabacteroides hominis (isolates:1; rSTs:1)
          • Parabacteroides johnsonii (isolates:17; rSTs:12 tree)
          • Parabacteroides leei (isolates:4; rSTs:2)
          • Parabacteroides massiliensis (isolates:1; rSTs:1)
          • Parabacteroides merdae (isolates:142; rSTs:52 tree)
          • Parabacteroides pacaensis (isolates:1; rSTs:1)
          • Parabacteroides provencensis (isolates:1; rSTs:1)
          • Parabacteroides segnis (isolates:1; rSTs:1)
          • Parabacteroides sp. (isolates:41; rSTs:27 tree)
          • Parabacteroides timonensis (isolates:1; rSTs:1)
        • Tannerella (isolates:19; rSTs:24 tree)
          • Tannerella forsythia (isolates:12; rSTs:21 tree)
          • Tannerella serpentiformis (isolates:7; rSTs:3 tree)
      • Tenuifilaceae (isolates:2; rSTs:2)
        • Perlabentimonas (isolates:1; rSTs:1)
          • Perlabentimonas gracilis (isolates:1; rSTs:1)
        • Tenuifilum (isolates:1; rSTs:1)
          • Tenuifilum thalassicum (isolates:1; rSTs:1)
      • Williamwhitmaniaceae (isolates:1; rSTs:1)
        • Williamwhitmania (isolates:1; rSTs:1)
          • Williamwhitmania taraxaci (isolates:1; rSTs:1)
    • Marinilabiliales (isolates:92; rSTs:78 tree)
      • Marinifilaceae (isolates:25; rSTs:21 tree)
        • Ancylomarina (isolates:8; rSTs:6 tree)
          • Ancylomarina euxinus (isolates:3; rSTs:1)
          • Ancylomarina longa (isolates:1; rSTs:1)
          • Ancylomarina salipaludis (isolates:1; rSTs:1)
          • Ancylomarina sp. (isolates:2; rSTs:2)
          • Ancylomarina subtilis (isolates:1; rSTs:1)
        • Labilibaculum (isolates:8; rSTs:6 tree)
          • Labilibaculum antarcticum (isolates:1; rSTs:1)
          • Labilibaculum euxinus (isolates:4; rSTs:2)
          • Labilibaculum filiforme (isolates:1; rSTs:1)
          • Labilibaculum manganireducens (isolates:1; rSTs:1)
          • Labilibaculum sp. (isolates:1; rSTs:1)
        • Marinifilum (isolates:9; rSTs:9 tree)
          • Marinifilum breve (isolates:1; rSTs:1)
          • Marinifilum caeruleilacunae (isolates:1; rSTs:1)
          • Marinifilum flexuosum (isolates:3; rSTs:3 tree)
          • Marinifilum fragile (isolates:1; rSTs:1)
          • Marinifilum sp. (isolates:3; rSTs:3 tree)
      • Marinilabiliaceae (isolates:32; rSTs:28 tree)
        • Alkaliflexus (isolates:1; rSTs:1)
          • Alkaliflexus imshenetskii (isolates:1; rSTs:1)
        • Alkalitalea (isolates:2; rSTs:1)
          • Alkalitalea saponilacus (isolates:2; rSTs:1)
        • Anaerophaga (isolates:2; rSTs:2)
          • Anaerophaga thermohalophila (isolates:2; rSTs:2)
        • Breznakibacter (isolates:1; rSTs:1)
          • Breznakibacter xylanolyticus (isolates:1; rSTs:1)
        • Carboxylicivirga (isolates:6; rSTs:6 tree)
          • Carboxylicivirga linearis (isolates:1; rSTs:1)
          • Carboxylicivirga marina (isolates:1; rSTs:1)
          • Carboxylicivirga mesophila (isolates:1; rSTs:1)
          • Carboxylicivirga sediminis (isolates:1; rSTs:1)
          • Carboxylicivirga sp. (isolates:2; rSTs:2)
        • Geofilum (isolates:2; rSTs:2)
          • Geofilum rhodophaeum (isolates:1; rSTs:1)
          • Geofilum rubicundum (isolates:1; rSTs:1)
        • Labilibacter (isolates:2; rSTs:2)
          • Labilibacter marinus (isolates:1; rSTs:1)
          • Labilibacter sediminis (isolates:1; rSTs:1)
        • Marinilabilia (isolates:5; rSTs:4 tree)
          • Marinilabilia rubra (isolates:1; rSTs:1)
          • Marinilabilia salmonicolor (isolates:4; rSTs:3 tree)
        • Natronoflexus (isolates:1; rSTs:1)
          • Natronoflexus pectinivorans (isolates:1; rSTs:1)
        • Plebeiobacterium (isolates:2; rSTs:2)
          • Plebeiobacterium marinum (isolates:1; rSTs:1)
          • Plebeiobacterium sediminum (isolates:1; rSTs:1)
        • Saccharicrinis (isolates:5; rSTs:4 tree)
          • Saccharicrinis aurantiacus (isolates:2; rSTs:2)
          • Saccharicrinis carchari (isolates:1; rSTs:1)
          • Saccharicrinis fermentans (isolates:2; rSTs:1)
        • Thermophagus (isolates:2; rSTs:1)
          • Thermophagus xiamenensis (isolates:2; rSTs:1)
        • Xiashengella (isolates:1; rSTs:1)
          • Xiashengella succiniciproducens (isolates:1; rSTs:1)
      • Prolixibacteraceae (isolates:35; rSTs:29 tree)
        • Aquipluma (isolates:1; rSTs:1)
          • Aquipluma nitroreducens (isolates:1; rSTs:1)
        • Draconibacterium (isolates:7; rSTs:6 tree)
          • Draconibacterium aestuarii (isolates:1; rSTs:1)
          • Draconibacterium halophilum (isolates:1; rSTs:1)
          • Draconibacterium mangrovi (isolates:1; rSTs:1)
          • Draconibacterium orientale (isolates:2; rSTs:1)
          • Draconibacterium sediminis (isolates:1; rSTs:1)
          • Draconibacterium sp. (isolates:1; rSTs:1)
        • Gaoshiqia (isolates:1; rSTs:1)
          • Gaoshiqia sediminis (isolates:1; rSTs:1)
        • Mangrovibacterium (isolates:3; rSTs:3 tree)
          • Mangrovibacterium diazotrophicum (isolates:1; rSTs:1)
          • Mangrovibacterium lignilyticum (isolates:1; rSTs:1)
          • Mangrovibacterium marinum (isolates:1; rSTs:1)
        • Maribellus (isolates:8; rSTs:7 tree)
          • Maribellus comscasis (isolates:1; rSTs:1)
          • Maribellus luteus (isolates:1; rSTs:1)
          • Maribellus mangrovi (isolates:1)
          • Maribellus maritimus (isolates:1; rSTs:1)
          • Maribellus sediminis (isolates:2; rSTs:2)
          • Maribellus sp. (isolates:2; rSTs:2)
        • Mariniphaga (isolates:2; rSTs:2)
          • Mariniphaga anaerophila (isolates:1; rSTs:1)
          • Mariniphaga sediminis (isolates:1; rSTs:1)
        • Prolixibacter (isolates:7; rSTs:4 tree)
          • Prolixibacter bellariivorans (isolates:3; rSTs:1)
          • Prolixibacter denitrificans (isolates:2; rSTs:1)
          • Prolixibacter sp. (isolates:2; rSTs:2)
        • Sunxiuqinia (isolates:5; rSTs:4 tree)
          • Sunxiuqinia dokdonensis (isolates:1; rSTs:1)
          • Sunxiuqinia elliptica (isolates:3; rSTs:2)
          • Sunxiuqinia indica (isolates:1; rSTs:1)
        • Tangfeifania (isolates:1; rSTs:1)
          • Tangfeifania diversioriginum (isolates:1; rSTs:1)
  • Chitinophagia (isolates:235; rSTs:194 tree)
    • Chitinophagales (isolates:235; rSTs:194 tree)
      • Chitinophagaceae (isolates:235; rSTs:194 tree)
        • Agriterribacter (isolates:1; rSTs:1)
          • Agriterribacter humi (isolates:1; rSTs:1)
        • Arachidicoccus (isolates:4; rSTs:4 tree)
          • Arachidicoccus ginsenosidivorans (isolates:1; rSTs:1)
          • Arachidicoccus rhizosphaerae (isolates:1; rSTs:1)
          • Arachidicoccus soli (isolates:1; rSTs:1)
          • Arachidicoccus terrestris (isolates:1; rSTs:1)
        • Aridibaculum (isolates:1; rSTs:1)
          • Aridibaculum aurantiacum (isolates:1; rSTs:1)
        • Asinibacterium (isolates:2; rSTs:2)
          • Asinibacterium sp. (isolates:2; rSTs:2)
        • Chitinophaga (isolates:97; rSTs:79 tree)
          • Chitinophaga agri (isolates:1; rSTs:1)
          • Chitinophaga agrisoli (isolates:1; rSTs:1)
          • Chitinophaga alhagiae (isolates:1; rSTs:1)
          • Chitinophaga arvensicola (isolates:1; rSTs:1)
          • Chitinophaga barathri (isolates:2; rSTs:1)
          • Chitinophaga caeni (isolates:1; rSTs:1)
          • Chitinophaga caseinilytica (isolates:1; rSTs:1)
          • Chitinophaga chungangae (isolates:1; rSTs:1)
          • Chitinophaga costaii (isolates:2; rSTs:1)
          • Chitinophaga cymbidii (isolates:1; rSTs:1)
          • Chitinophaga deserti (isolates:1; rSTs:1)
          • Chitinophaga dinghuensis (isolates:1; rSTs:1)
          • Chitinophaga eiseniae (isolates:1; rSTs:1)
          • Chitinophaga filiformis (isolates:1; rSTs:1)
          • Chitinophaga flava (isolates:1; rSTs:1)
          • Chitinophaga fulva (isolates:1; rSTs:1)
          • Chitinophaga ginsengisegetis (isolates:7; rSTs:3 tree)
          • Chitinophaga ginsengisoli (isolates:1; rSTs:1)
          • Chitinophaga horti (isolates:1; rSTs:1)
          • Chitinophaga hostae (isolates:1; rSTs:1)
          • Chitinophaga japonensis (isolates:2; rSTs:1)
          • Chitinophaga jiangningensis (isolates:1; rSTs:1)
          • Chitinophaga lutea (isolates:1; rSTs:1)
          • Chitinophaga niabensis (isolates:2; rSTs:2)
          • Chitinophaga niastensis (isolates:1; rSTs:1)
          • Chitinophaga nivalis (isolates:2; rSTs:1)
          • Chitinophaga oryzae (isolates:2; rSTs:2)
          • Chitinophaga oryziterrae (isolates:2; rSTs:1)
          • Chitinophaga parva (isolates:1; rSTs:1)
          • Chitinophaga pendula (isolates:1; rSTs:1)
          • Chitinophaga pinensis (isolates:2; rSTs:2)
          • Chitinophaga pollutisoli (isolates:1; rSTs:1)
          • Chitinophaga polysaccharea (isolates:2; rSTs:2)
          • Chitinophaga qingshengii (isolates:1; rSTs:1)
          • Chitinophaga rhizophila (isolates:1; rSTs:1)
          • Chitinophaga rhizosphaerae (isolates:1; rSTs:1)
          • Chitinophaga rupis (isolates:1; rSTs:1)
          • Chitinophaga sancti (isolates:3; rSTs:1)
          • Chitinophaga sedimenti (isolates:1)
          • Chitinophaga silvatica (isolates:1; rSTs:1)
          • Chitinophaga silvisoli (isolates:1; rSTs:1)
          • Chitinophaga skermanii (isolates:1; rSTs:1)
          • Chitinophaga solisilvae (isolates:2; rSTs:2)
          • Chitinophaga sp. (isolates:28; rSTs:24 tree)
          • Chitinophaga terrae (ex Kim and Jung 2007) (isolates:3; rSTs:2)
          • Chitinophaga tropicalis (isolates:1; rSTs:1)
          • Chitinophaga varians (isolates:1; rSTs:1)
          • Chitinophaga vietnamensis (isolates:2; rSTs:1)
          • [Flexibacter] sp. (isolates:1; rSTs:1)
        • Cnuella (isolates:2; rSTs:1)
          • Cnuella takakiae (isolates:2; rSTs:1)
        • Compostibacter (isolates:1)
          • Compostibacter hankyongensis (isolates:1)
        • Deminuibacter (isolates:1; rSTs:1)
          • Deminuibacter soli (isolates:1; rSTs:1)
        • Dinghuibacter (isolates:1; rSTs:1)
          • Dinghuibacter silviterrae (isolates:1; rSTs:1)
        • Edaphocola (isolates:2; rSTs:2)
          • Edaphocola aurantiacus (isolates:1; rSTs:1)
          • Edaphocola flava (isolates:1; rSTs:1)
        • Ferruginibacter (isolates:2; rSTs:2)
          • Ferruginibacter albus (isolates:1; rSTs:1)
          • Ferruginibacter paludis (isolates:1; rSTs:1)
        • Filimonas (isolates:7; rSTs:5 tree)
          • Filimonas effusa (isolates:1; rSTs:1)
          • Filimonas endophytica (isolates:1; rSTs:1)
          • Filimonas lacunae (isolates:2; rSTs:1)
          • Filimonas sp. (isolates:1; rSTs:1)
          • Filimonas zeae (isolates:2; rSTs:1)
        • Flaviaesturariibacter (isolates:3; rSTs:3 tree)
          • Flaviaesturariibacter amylovorans (isolates:1; rSTs:1)
          • Flaviaesturariibacter aridisoli (isolates:1; rSTs:1)
          • Flaviaesturariibacter flavus (isolates:1; rSTs:1)
        • Flavihumibacter (isolates:11; rSTs:10 tree)
          • Flavihumibacter cheonanensis (isolates:1; rSTs:1)
          • Flavihumibacter fluminis (isolates:1; rSTs:1)
          • Flavihumibacter fluvii (isolates:1; rSTs:1)
          • Flavihumibacter petaseus (isolates:1; rSTs:1)
          • Flavihumibacter profundi (isolates:1; rSTs:1)
          • Flavihumibacter rivuli (isolates:1; rSTs:1)
          • Flavihumibacter soli (isolates:1; rSTs:1)
          • Flavihumibacter solisilvae (isolates:1; rSTs:1)
          • Flavihumibacter sp. (isolates:2; rSTs:1)
          • Flavihumibacter stibioxidans (isolates:1; rSTs:1)
        • Flavipsychrobacter (isolates:1; rSTs:1)
          • Flavipsychrobacter stenotrophus (isolates:1; rSTs:1)
        • Flavisolibacter (isolates:7; rSTs:6 tree)
          • Flavisolibacter ginsengisoli (isolates:1; rSTs:1)
          • Flavisolibacter ginsenosidimutans (isolates:2; rSTs:1)
          • Flavisolibacter longurius (isolates:2; rSTs:2)
          • Flavisolibacter nicotianae (isolates:1; rSTs:1)
          • Flavisolibacter tropicus (isolates:1; rSTs:1)
        • Flavitalea (isolates:1; rSTs:1)
          • Flavitalea sp. (isolates:1; rSTs:1)
        • Foetidibacter (isolates:1; rSTs:1)
          • Foetidibacter luteolus (isolates:1; rSTs:1)
        • Ginsengibacter (isolates:1; rSTs:1)
          • Ginsengibacter hankyongi (isolates:1; rSTs:1)
        • Gynurincola (isolates:1; rSTs:1)
          • Gynurincola endophyticus (isolates:1; rSTs:1)
        • Hanamia (isolates:1; rSTs:1)
          • Hanamia caeni (isolates:1; rSTs:1)
        • Haoranjiania (isolates:1; rSTs:1)
          • Haoranjiania flava (isolates:1; rSTs:1)
        • Hydrobacter (isolates:1; rSTs:1)
          • Hydrobacter penzbergensis (isolates:1; rSTs:1)
        • Hydrotalea (isolates:8; rSTs:2)
          • Hydrotalea flava (isolates:7; rSTs:1)
          • Hydrotalea sandarakina (isolates:1; rSTs:1)
        • Ilyomonas (isolates:1; rSTs:1)
          • Ilyomonas limi (isolates:1; rSTs:1)
        • Lacibacter (isolates:5; rSTs:5 tree)
          • Lacibacter cauensis (isolates:1; rSTs:1)
          • Lacibacter luteus (isolates:1; rSTs:1)
          • Lacibacter sediminis (isolates:1; rSTs:1)
          • Lacibacter sp. (isolates:2; rSTs:2)
        • Limnovirga (isolates:1; rSTs:1)
          • Limnovirga soli (isolates:1; rSTs:1)
        • Longitalea (isolates:2; rSTs:2)
          • Longitalea arenae (isolates:1; rSTs:1)
          • Longitalea luteola (isolates:1; rSTs:1)
        • Nemorincola (isolates:1)
          • Nemorincola caseinilytica (isolates:1)
        • Niabella (isolates:15; rSTs:10 tree)
          • Niabella agricola (isolates:1; rSTs:1)
          • Niabella aurantiaca (isolates:1; rSTs:1)
          • Niabella beijingensis (isolates:2; rSTs:1)
          • Niabella drilacis (isolates:1; rSTs:1)
          • Niabella ginsengisoli (isolates:1; rSTs:1)
          • Niabella ginsenosidivorans (isolates:1; rSTs:1)
          • Niabella hibiscisoli (isolates:1)
          • Niabella pedocola (isolates:1; rSTs:1)
          • Niabella soli (isolates:1; rSTs:1)
          • Niabella sp. (isolates:3; rSTs:1)
          • Niabella yanshanensis (isolates:2; rSTs:1)
        • Niastella (isolates:9; rSTs:7 tree)
          • Niastella caeni (isolates:1; rSTs:1)
          • Niastella koreensis (isolates:2; rSTs:1)
          • Niastella populi (isolates:1; rSTs:1)
          • Niastella soli (isolates:1; rSTs:1)
          • Niastella sp. (isolates:1; rSTs:1)
          • Niastella vici (isolates:1; rSTs:1)
          • Niastella yeongjuensis (isolates:2; rSTs:1)
        • Panacibacter (isolates:2; rSTs:2)
          • Panacibacter ginsenosidivorans (isolates:1; rSTs:1)
          • Panacibacter microcysteis (isolates:1; rSTs:1)
        • Paracnuella (isolates:1; rSTs:1)
          • Paracnuella aquatica (isolates:1; rSTs:1)
        • Parafilimonas (isolates:1; rSTs:1)
          • Parafilimonas terrae (isolates:1; rSTs:1)
        • Paraflavitalea (isolates:5; rSTs:5 tree)
          • Paraflavitalea devenefica (isolates:1; rSTs:1)
          • Paraflavitalea pollutisoli (isolates:1; rSTs:1)
          • Paraflavitalea soli (isolates:1; rSTs:1)
          • Paraflavitalea sp. (isolates:1; rSTs:1)
          • Paraflavitalea speifideaquila (isolates:1; rSTs:1)
        • Phnomibacter (isolates:1; rSTs:1)
          • Phnomibacter ginsenosidimutans (isolates:1; rSTs:1)
        • Pinibacter (isolates:2; rSTs:2)
          • Pinibacter aurantiacus (isolates:1; rSTs:1)
          • Pinibacter soli (isolates:1; rSTs:1)
        • Polluticoccus (isolates:1; rSTs:1)
          • Polluticoccus soli (isolates:1; rSTs:1)
        • Pseudobacter (isolates:2; rSTs:1)
          • Pseudobacter ginsenosidimutans (isolates:2; rSTs:1)
        • Pseudocnuella (isolates:1; rSTs:1)
          • Pseudocnuella soli (isolates:1; rSTs:1)
        • Pseudoflavitalea (isolates:1; rSTs:1)
          • Pseudoflavitalea rhizosphaerae (isolates:1; rSTs:1)
        • Puia (isolates:1; rSTs:1)
          • Puia dinghuensis (isolates:1; rSTs:1)
        • Rhizosphaericola (isolates:1; rSTs:1)
          • Rhizosphaericola mali (isolates:1; rSTs:1)
        • Rurimicrobium (isolates:1; rSTs:1)
          • Rurimicrobium arvi (isolates:1; rSTs:1)
        • Sediminibacterium (isolates:11; rSTs:9 tree)
          • Sediminibacterium ginsengisoli (isolates:1; rSTs:1)
          • Sediminibacterium goheungense (isolates:1; rSTs:1)
          • Sediminibacterium magnilacihabitans (isolates:1; rSTs:1)
          • Sediminibacterium roseum (isolates:1; rSTs:1)
          • Sediminibacterium salmoneum (isolates:1)
          • Sediminibacterium soli (isolates:1; rSTs:1)
          • Sediminibacterium sp. (isolates:5; rSTs:4 tree)
        • Segetibacter (isolates:2; rSTs:2)
          • Segetibacter aerophilus (isolates:1; rSTs:1)
          • Segetibacter koreensis (isolates:1; rSTs:1)
        • Taibaiella (isolates:5; rSTs:5 tree)
          • Taibaiella chishuiensis (isolates:1; rSTs:1)
          • Taibaiella helva (isolates:1; rSTs:1)
          • Taibaiella koreensis (isolates:1; rSTs:1)
          • Taibaiella lutea (isolates:1; rSTs:1)
          • Taibaiella soli (isolates:1; rSTs:1)
        • Terrimonas (isolates:3; rSTs:3 tree)
          • Terrimonas ferruginea (isolates:1; rSTs:1)
          • Terrimonas ginsenosidimutans (isolates:1; rSTs:1)
          • Terrimonas pollutisoli (isolates:1; rSTs:1)
        • Thermoflavifilum (isolates:2; rSTs:2)
          • Thermoflavifilum aggregans (isolates:1; rSTs:1)
          • Thermoflavifilum thermophilum (isolates:1; rSTs:1)
  • Cytophagia (isolates:728; rSTs:641 tree)
    • Cytophagales (isolates:728; rSTs:641 tree)
      • Amoebophilaceae (isolates:15; rSTs:14 tree)
        • Candidatus Amoebophilus (isolates:1; rSTs:1)
          • Candidatus Amoebophilus asiaticus (isolates:1; rSTs:1)
        • Candidatus Cardinium (isolates:14; rSTs:13 tree)
          • Candidatus Cardinium hertigii (isolates:1; rSTs:1)
          • Candidatus Cardinium sp. (isolates:4; rSTs:3 tree)
          • Cardinium endosymbiont of Bemisia tabaci (isolates:2; rSTs:2)
          • Cardinium endosymbiont of Culicoides punctatus (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Dermatophagoides farinae (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Encarsia pergandiella (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Oedothorax gibbosus (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Philonthus spinipes (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Sogatella furcifera (isolates:1; rSTs:1)
          • Cardinium endosymbiont of Tipula unca (isolates:1; rSTs:1)
      • Bernardetiaceae (isolates:5; rSTs:5 tree)
        • Bernardetia (isolates:4; rSTs:4 tree)
          • Bernardetia litoralis (isolates:1; rSTs:1)
          • Bernardetia sp. (isolates:3; rSTs:3 tree)
        • Hugenholtzia (isolates:1; rSTs:1)
          • Hugenholtzia roseola (isolates:1; rSTs:1)
      • Catalimonadaceae (isolates:6; rSTs:4 tree)
        • Catalinimonas (isolates:3; rSTs:1)
          • Catalinimonas alkaloidigena (isolates:1; rSTs:1)
          • Catalinimonas niigatensis (isolates:1)
          • Catalinimonas sp. (isolates:1)
        • Porifericola (isolates:1; rSTs:1)
          • Porifericola rhodea (isolates:1; rSTs:1)
        • Roseihalotalea (isolates:1; rSTs:1)
          • Roseihalotalea indica (isolates:1; rSTs:1)
        • Tunicatimonas (isolates:1; rSTs:1)
          • Tunicatimonas pelagia (isolates:1; rSTs:1)
      • Cesiribacteraceae (isolates:3; rSTs:3 tree)
        • Cesiribacter (isolates:2; rSTs:2)
          • Cesiribacter andamanensis (isolates:1; rSTs:1)
          • Cesiribacter sp. (isolates:1; rSTs:1)
        • Nafulsella (isolates:1; rSTs:1)
          • Nafulsella turpanensis (isolates:1; rSTs:1)
      • Chryseotaleaceae (isolates:5; rSTs:5 tree)
        • Chryseosolibacter (isolates:2; rSTs:2)
          • Chryseosolibacter histidini (isolates:1; rSTs:1)
          • Chryseosolibacter indicus (isolates:1; rSTs:1)
        • Chryseotalea (isolates:1; rSTs:1)
          • Chryseotalea sanaruensis (isolates:1; rSTs:1)
        • Dawidia (isolates:2; rSTs:2)
          • Dawidia cretensis (isolates:1; rSTs:1)
          • Dawidia soli (isolates:1; rSTs:1)
      • Cyclobacteriaceae (isolates:129; rSTs:118 tree)
        • Algoriphagus (isolates:64; rSTs:59 tree)
          • Algoriphagus aestuariicola (isolates:1; rSTs:1)
          • Algoriphagus algorifonticola (isolates:1; rSTs:1)
          • Algoriphagus alkaliphilus (isolates:1; rSTs:1)
          • Algoriphagus antarcticus (isolates:2; rSTs:1)
          • Algoriphagus aquaeductus (isolates:1; rSTs:1)
          • Algoriphagus aquimarinus (isolates:2; rSTs:2)
          • Algoriphagus aquimaris (isolates:1; rSTs:1)
          • Algoriphagus boritolerans (isolates:1; rSTs:1)
          • Algoriphagus boseongensis (isolates:1; rSTs:1)
          • Algoriphagus chordae (isolates:1; rSTs:1)
          • Algoriphagus confluentis (isolates:1; rSTs:1)
          • Algoriphagus faecimaris (isolates:2; rSTs:1)
          • Algoriphagus formosus (isolates:1; rSTs:1)
          • Algoriphagus halophilus (isolates:1; rSTs:1)
          • Algoriphagus hitonicola (isolates:1; rSTs:1)
          • Algoriphagus iocasae (isolates:1; rSTs:1)
          • Algoriphagus jejuensis (isolates:1; rSTs:1)
          • Algoriphagus kandeliae (isolates:1; rSTs:1)
          • Algoriphagus lacus (isolates:1; rSTs:1)
          • Algoriphagus limi (isolates:1; rSTs:1)
          • Algoriphagus litoralis (isolates:1; rSTs:1)
          • Algoriphagus locisalis (isolates:1; rSTs:1)
          • Algoriphagus lutimaris (isolates:1; rSTs:1)
          • Algoriphagus machipongonensis (isolates:1; rSTs:1)
          • Algoriphagus mannitolivorans (isolates:1; rSTs:1)
          • Algoriphagus marincola (isolates:2; rSTs:2)
          • Algoriphagus marinus (isolates:1; rSTs:1)
          • Algoriphagus oliviformis (isolates:1; rSTs:1)
          • Algoriphagus ornithinivorans (isolates:1; rSTs:1)
          • Algoriphagus pacificus (isolates:1; rSTs:1)
          • Algoriphagus ratkowskyi (isolates:3; rSTs:1)
          • Algoriphagus resistens (isolates:1; rSTs:1)
          • Algoriphagus sanaruensis (isolates:1; rSTs:1)
          • Algoriphagus sp. (isolates:17; rSTs:18 tree)
          • Algoriphagus taiwanensis (isolates:1; rSTs:1)
          • Algoriphagus terrigena (isolates:2; rSTs:1)
          • Algoriphagus vanfongensis (isolates:1; rSTs:1)
          • Algoriphagus winogradskyi (isolates:1; rSTs:1)
          • Algoriphagus yeomjeoni (isolates:1; rSTs:1)
          • Algoriphagus zhangzhouensis (isolates:2; rSTs:1)
        • Aquiflexum (isolates:4; rSTs:4 tree)
          • Aquiflexum balticum (isolates:1; rSTs:1)
          • Aquiflexum gelatinilyticum (isolates:2; rSTs:2)
          • Aquiflexum lacus (isolates:1; rSTs:1)
        • Arthrospiribacter (isolates:1; rSTs:1)
          • Arthrospiribacter ruber (isolates:1; rSTs:1)
        • Belliella (isolates:10; rSTs:8 tree)
          • Belliella alkalica (isolates:1; rSTs:1)
          • Belliella aquatica (isolates:2; rSTs:1)
          • Belliella baltica (isolates:1; rSTs:1)
          • Belliella buryatensis (isolates:1; rSTs:1)
          • Belliella calami (isolates:1; rSTs:1)
          • Belliella filtrata (isolates:1; rSTs:1)
          • Belliella kenyensis (isolates:2; rSTs:1)
          • Belliella pelovolcani (isolates:1; rSTs:1)
        • Cecembia (isolates:3; rSTs:3 tree)
          • Cecembia calidifontis (isolates:1; rSTs:1)
          • Cecembia lonarensis (isolates:1; rSTs:1)
          • Cecembia rubra (isolates:1; rSTs:1)
        • Cognataquiflexum (isolates:3; rSTs:3 tree)
          • Cognataquiflexum aquatile (isolates:1; rSTs:1)
          • Cognataquiflexum nitidum (isolates:1; rSTs:1)
          • Cognataquiflexum rubidum (isolates:1; rSTs:1)
        • Cyclobacterium (isolates:15; rSTs:13 tree)
          • Cyclobacterium amurskyense (isolates:1; rSTs:1)
          • Cyclobacterium jeungdonense (isolates:2; rSTs:1)
          • Cyclobacterium lianum (isolates:1; rSTs:1)
          • Cyclobacterium marinum (isolates:2; rSTs:2)
          • Cyclobacterium plantarum (isolates:1; rSTs:1)
          • Cyclobacterium qasimii (isolates:2; rSTs:1)
          • Cyclobacterium roseum (isolates:1; rSTs:1)
          • Cyclobacterium salsum (isolates:1; rSTs:1)
          • Cyclobacterium sp. (isolates:2; rSTs:2)
          • Cyclobacterium xiamenense (isolates:2; rSTs:2)
        • Echinicola (isolates:13; rSTs:11 tree)
          • Echinicola arenosa (isolates:1; rSTs:1)
          • Echinicola jeungdonensis (isolates:1; rSTs:1)
          • Echinicola marina (isolates:1; rSTs:1)
          • Echinicola pacifica (isolates:2; rSTs:1)
          • Echinicola rosea (isolates:2; rSTs:1)
          • Echinicola salinicaeni (isolates:1; rSTs:1)
          • Echinicola shivajiensis (isolates:1; rSTs:1)
          • Echinicola soli (isolates:1; rSTs:1)
          • Echinicola sp. (isolates:1; rSTs:1)
          • Echinicola strongylocentroti (isolates:1; rSTs:1)
          • Echinicola vietnamensis (isolates:1; rSTs:1)
        • Indibacter (isolates:1; rSTs:1)
          • Indibacter alkaliphilus (isolates:1; rSTs:1)
        • Litoribacter (isolates:3; rSTs:3 tree)
          • Litoribacter populi (isolates:1; rSTs:1)
          • Litoribacter ruber (isolates:2; rSTs:2)
        • Lunatibacter (isolates:1; rSTs:1)
          • Lunatibacter salilacus (isolates:1; rSTs:1)
        • Lunatimonas (isolates:2; rSTs:2)
          • Lunatimonas lonarensis (isolates:1; rSTs:1)
          • Lunatimonas salinarum (isolates:1; rSTs:1)
        • Mariniradius (isolates:2; rSTs:2)
          • Mariniradius saccharolyticus (isolates:1; rSTs:1)
          • Mariniradius sediminis (isolates:1; rSTs:1)
        • Mongoliibacter (isolates:1; rSTs:1)
          • Mongoliibacter ruber (isolates:1; rSTs:1)
        • Mongoliitalea (isolates:2; rSTs:2)
          • Mongoliitalea daihaiensis (isolates:1; rSTs:1)
          • Mongoliitalea lutea (isolates:1; rSTs:1)
        • Nitritalea (isolates:1; rSTs:1)
          • Nitritalea halalkaliphila (isolates:1; rSTs:1)
        • Pararhodonellum (isolates:1; rSTs:1)
          • Pararhodonellum marinum (isolates:1; rSTs:1)
        • Penaeicola (isolates:1; rSTs:1)
          • Penaeicola halotolerans (isolates:1; rSTs:1)
        • Pleomorphovibrio (isolates:1; rSTs:1)
          • Pleomorphovibrio marinus (isolates:1; rSTs:1)
      • Cytophagaceae (isolates:53; rSTs:49 tree)
        • Anditalea (isolates:1; rSTs:1)
          • Anditalea andensis (isolates:1; rSTs:1)
        • Cytophaga (isolates:3; rSTs:2)
          • Cytophaga aurantiaca (isolates:1; rSTs:1)
          • Cytophaga hutchinsonii (isolates:2; rSTs:1)
        • Rhabdobacter (isolates:1; rSTs:1)
          • Rhabdobacter roseus (isolates:1; rSTs:1)
        • Rhodocytophaga (isolates:2; rSTs:2)
          • Rhodocytophaga aerolata (isolates:1; rSTs:1)
          • Rhodocytophaga rosea (isolates:1; rSTs:1)
        • Rhodonellum (isolates:2; rSTs:1)
          • Rhodonellum psychrophilum (isolates:2; rSTs:1)
        • Rudanella (isolates:2; rSTs:2)
          • Rudanella lutea (isolates:1; rSTs:1)
          • Rudanella paleaurantiibacter (isolates:1; rSTs:1)
        • Siphonobacter (isolates:7; rSTs:7 tree)
          • Siphonobacter aquaeclarae (isolates:1; rSTs:1)
          • Siphonobacter curvatus (isolates:1; rSTs:1)
          • Siphonobacter sp. (isolates:5; rSTs:5 tree)
        • Spirosoma (isolates:33; rSTs:31 tree)
          • Spirosoma aerolatum (isolates:1; rSTs:1)
          • Spirosoma agri (isolates:1; rSTs:1)
          • Spirosoma arboris (isolates:1; rSTs:1)
          • Spirosoma aureum (isolates:1; rSTs:1)
          • Spirosoma endbachense (isolates:1; rSTs:1)
          • Spirosoma endophyticum (isolates:1; rSTs:1)
          • Spirosoma fluviale (isolates:1; rSTs:1)
          • Spirosoma foliorum (isolates:1; rSTs:1)
          • Spirosoma lacussanchae (isolates:1; rSTs:1)
          • Spirosoma liriopis (isolates:1; rSTs:1)
          • Spirosoma luteum (isolates:1; rSTs:1)
          • Spirosoma montaniterrae (isolates:1; rSTs:1)
          • Spirosoma oryzae (isolates:1; rSTs:1)
          • Spirosoma oryzicola (isolates:1; rSTs:1)
          • Spirosoma panaciterrae (isolates:1; rSTs:1)
          • Spirosoma pollinicola (isolates:1; rSTs:1)
          • Spirosoma profusum (isolates:1; rSTs:1)
          • Spirosoma radiotolerans (isolates:1; rSTs:1)
          • Spirosoma rhododendri (isolates:1; rSTs:1)
          • Spirosoma rigui (isolates:1; rSTs:1)
          • Spirosoma sordidisoli (isolates:1; rSTs:1)
          • Spirosoma sp. (isolates:4; rSTs:4 tree)
          • Spirosoma spitsbergense (isolates:1; rSTs:1)
          • Spirosoma taeanense (isolates:1; rSTs:1)
          • Spirosoma telluris (isolates:2; rSTs:1)
          • Spirosoma terrae (isolates:1; rSTs:1)
          • Spirosoma utsteinense (isolates:2; rSTs:1)
          • Spirosoma validum (isolates:1; rSTs:1)
        • Sporocytophaga (isolates:2; rSTs:2)
          • Sporocytophaga myxococcoides (isolates:2; rSTs:2)
      • Flammeovirgaceae (isolates:25; rSTs:19 tree)
        • Algivirga (isolates:1; rSTs:1)
          • Algivirga pacifica (isolates:1; rSTs:1)
        • Chondrinema (isolates:1; rSTs:1)
          • Chondrinema litorale (isolates:1; rSTs:1)
        • Flammeovirga (isolates:15; rSTs:11 tree)
          • Flammeovirga agarivorans (isolates:1; rSTs:1)
          • Flammeovirga aprica (isolates:1; rSTs:1)
          • Flammeovirga kamogawensis (isolates:3; rSTs:1)
          • Flammeovirga pacifica (isolates:1; rSTs:1)
          • Flammeovirga pectinis (isolates:1; rSTs:1)
          • Flammeovirga sp. (isolates:5; rSTs:5 tree)
          • Flammeovirga yaeyamensis (isolates:3; rSTs:1)
        • Flexithrix (isolates:1; rSTs:1)
          • Flexithrix dorotheae (isolates:1; rSTs:1)
        • Imperialibacter (isolates:4; rSTs:2)
          • Imperialibacter roseus (isolates:1; rSTs:1)
          • Imperialibacter sp. (isolates:3; rSTs:1)
        • Marinigracilibium (isolates:1; rSTs:1)
          • Marinigracilibium pacificum (isolates:1; rSTs:1)
        • Rapidithrix (isolates:1; rSTs:1)
          • Rapidithrix thailandica (isolates:1; rSTs:1)
        • Sediminitomix (isolates:1; rSTs:1)
          • Sediminitomix flava (isolates:1; rSTs:1)
      • Flectobacillaceae (isolates:41; rSTs:39 tree)
        • Aquirufa (isolates:22; rSTs:22 tree)
          • Aquirufa antheringensis (isolates:7; rSTs:7 tree)
          • Aquirufa aurantiipilula (isolates:2; rSTs:2)
          • Aquirufa beregesia (isolates:1; rSTs:1)
          • Aquirufa ecclesiirivi (isolates:4; rSTs:4 tree)
          • Aquirufa lenticrescens (isolates:1; rSTs:1)
          • Aquirufa nivalisilvae (isolates:4; rSTs:4 tree)
          • Aquirufa regiilacus (isolates:2; rSTs:2)
          • Aquirufa rosea (isolates:1; rSTs:1)
        • Arcicella (isolates:10; rSTs:8 tree)
          • Arcicella aquatica (isolates:1; rSTs:1)
          • Arcicella aurantiaca (isolates:1; rSTs:1)
          • Arcicella gelida (isolates:1; rSTs:1)
          • Arcicella lustrica (isolates:1; rSTs:1)
          • Arcicella rigui (isolates:1; rSTs:1)
          • Arcicella rosea (isolates:1; rSTs:1)
          • Arcicella sp. (isolates:4; rSTs:2)
        • Flectobacillus (isolates:7; rSTs:7 tree)
          • Flectobacillus longus (isolates:2; rSTs:2)
          • Flectobacillus major (isolates:1; rSTs:1)
          • Flectobacillus rivi (isolates:1; rSTs:1)
          • Flectobacillus roseus (isolates:2; rSTs:2)
          • Flectobacillus sp. (isolates:1; rSTs:1)
        • Pseudarcicella (isolates:1; rSTs:1)
          • Pseudarcicella hirudinis (isolates:1; rSTs:1)
        • Sandaracinomonas (isolates:1; rSTs:1)
          • Sandaracinomonas limnophila (isolates:1; rSTs:1)
      • Flexibacteraceae (isolates:1; rSTs:1)
        • Flexibacter (isolates:1; rSTs:1)
          • Flexibacter flexilis (isolates:1; rSTs:1)
      • Fulvivirgaceae (isolates:19; rSTs:16 tree)
        • Chryseolinea (isolates:3; rSTs:3 tree)
          • Chryseolinea lacunae (isolates:1; rSTs:1)
          • Chryseolinea serpens (isolates:1; rSTs:1)
          • Chryseolinea soli (isolates:1; rSTs:1)
        • Fulvivirga (isolates:12; rSTs:9 tree)
          • Fulvivirga aurantia (isolates:1)
          • Fulvivirga imtechensis (isolates:1; rSTs:1)
          • Fulvivirga kasyanovii (isolates:2; rSTs:1)
          • Fulvivirga ligni (isolates:1; rSTs:1)
          • Fulvivirga lutea (isolates:1; rSTs:1)
          • Fulvivirga lutimaris (isolates:1; rSTs:1)
          • Fulvivirga marina (isolates:1; rSTs:1)
          • Fulvivirga maritima (isolates:1; rSTs:1)
          • Fulvivirga sedimenti (isolates:1)
          • Fulvivirga sediminis (isolates:1; rSTs:1)
          • Fulvivirga ulvae (isolates:1; rSTs:1)
        • Ohtaekwangia (isolates:1; rSTs:1)
          • Ohtaekwangia koreensis (isolates:1; rSTs:1)
        • Parachryseolinea (isolates:1; rSTs:1)
          • Parachryseolinea silvisoli (isolates:1; rSTs:1)
        • Pseudochryseolinea (isolates:1; rSTs:1)
          • Pseudochryseolinea flava (isolates:1; rSTs:1)
        • Xanthovirga (isolates:1; rSTs:1)
          • Xanthovirga aplysinae (isolates:1; rSTs:1)
      • Hymenobacteraceae (isolates:243; rSTs:210 tree)
        • Adhaeribacter (isolates:9; rSTs:9 tree)
          • Adhaeribacter aerolatus (isolates:1; rSTs:1)
          • Adhaeribacter aquaticus (isolates:1; rSTs:1)
          • Adhaeribacter arboris (isolates:1; rSTs:1)
          • Adhaeribacter pallidiroseus (isolates:1; rSTs:1)
          • Adhaeribacter radiodurans (isolates:1; rSTs:1)
          • Adhaeribacter rhizoryzae (isolates:1; rSTs:1)
          • Adhaeribacter soli (isolates:1; rSTs:1)
          • Adhaeribacter swui (isolates:1; rSTs:1)
          • Adhaeribacter terrigena (isolates:1; rSTs:1)
        • Botryobacter (isolates:1; rSTs:1)
          • Botryobacter ruber (isolates:1; rSTs:1)
        • Hymenobacter (isolates:146; rSTs:134 tree)
          • Hymenobacter actinosclerus (isolates:1; rSTs:1)
          • Hymenobacter aerilatus (isolates:1; rSTs:1)
          • Hymenobacter aerophilus (isolates:1; rSTs:1)
          • Hymenobacter algoricola (isolates:1; rSTs:1)
          • Hymenobacter amundsenii (isolates:1; rSTs:1)
          • Hymenobacter antarcticus (isolates:1; rSTs:1)
          • Hymenobacter aquaticus (isolates:1; rSTs:1)
          • Hymenobacter arizonensis (isolates:1; rSTs:1)
          • Hymenobacter armeniacus (isolates:1; rSTs:1)
          • Hymenobacter artigasi (isolates:1; rSTs:1)
          • Hymenobacter baengnokdamensis (isolates:1; rSTs:1)
          • Hymenobacter busanensis (isolates:2; rSTs:1)
          • Hymenobacter caeli (isolates:1; rSTs:1)
          • Hymenobacter canadensis (isolates:1; rSTs:1)
          • Hymenobacter cavernae (isolates:1; rSTs:1)
          • Hymenobacter cellulosilyticus (isolates:1; rSTs:1)
          • Hymenobacter cellulosivorans (isolates:1; rSTs:1)
          • Hymenobacter chitinivorans (isolates:1; rSTs:1)
          • Hymenobacter citatus (isolates:1; rSTs:1)
          • Hymenobacter coccineus (isolates:1; rSTs:1)
          • Hymenobacter crusticola (isolates:1; rSTs:1)
          • Hymenobacter cyanobacteriorum (isolates:1; rSTs:1)
          • Hymenobacter daecheongensis (isolates:1; rSTs:1)
          • Hymenobacter defluvii (isolates:1)
          • Hymenobacter duratus (isolates:1; rSTs:1)
          • Hymenobacter edaphi (isolates:1; rSTs:1)
          • Hymenobacter elongatus (isolates:1; rSTs:1)
          • Hymenobacter endophyticus (isolates:1; rSTs:1)
          • Hymenobacter fastidiosus (isolates:1; rSTs:1)
          • Hymenobacter fodinae (isolates:1; rSTs:1)
          • Hymenobacter frigidus (isolates:1; rSTs:1)
          • Hymenobacter gelipurpurascens (isolates:1; rSTs:1)
          • Hymenobacter ginkgonis (isolates:1; rSTs:1)
          • Hymenobacter ginsengisoli (isolates:1; rSTs:1)
          • Hymenobacter glacialis (isolates:1; rSTs:1)
          • Hymenobacter glaciei (isolates:1; rSTs:1)
          • Hymenobacter glacieicola (isolates:1; rSTs:1)
          • Hymenobacter gummosus (isolates:1; rSTs:1)
          • Hymenobacter guriensis (isolates:1; rSTs:1)
          • Hymenobacter jejuensis (isolates:1; rSTs:1)
          • Hymenobacter jeollabukensis (isolates:1; rSTs:1)
          • Hymenobacter jeongseonensis (isolates:1; rSTs:1)
          • Hymenobacter koreensis (isolates:1; rSTs:1)
          • Hymenobacter lapidarius (isolates:1; rSTs:1)
          • Hymenobacter lapidiphilus (isolates:1; rSTs:1)
          • Hymenobacter latericoloratus (isolates:1; rSTs:1)
          • Hymenobacter lucidus (isolates:1; rSTs:1)
          • Hymenobacter lutimineralis (isolates:1; rSTs:1)
          • Hymenobacter metallicola (isolates:1; rSTs:1)
          • Hymenobacter metallilatus (isolates:1; rSTs:1)
          • Hymenobacter montanus (isolates:1; rSTs:1)
          • Hymenobacter monticola (isolates:1; rSTs:1)
          • Hymenobacter mucosus (isolates:1; rSTs:1)
          • Hymenobacter negativus (isolates:2; rSTs:2)
          • Hymenobacter nitidus (isolates:1; rSTs:1)
          • Hymenobacter nivis (isolates:1; rSTs:1)
          • Hymenobacter norwichensis (isolates:1; rSTs:1)
          • Hymenobacter oligotrophus (isolates:1; rSTs:1)
          • Hymenobacter perfusus (isolates:1; rSTs:1)
          • Hymenobacter persicinus (isolates:1; rSTs:1)
          • Hymenobacter pini (isolates:1; rSTs:1)
          • Hymenobacter piscis (isolates:1; rSTs:1)
          • Hymenobacter polaris (isolates:1; rSTs:1)
          • Hymenobacter profundi (isolates:1; rSTs:1)
          • Hymenobacter properus (isolates:1; rSTs:1)
          • Hymenobacter psoromatis (isolates:3; rSTs:2)
          • Hymenobacter psychrophilus (isolates:1; rSTs:1)
          • Hymenobacter psychrotolerans (isolates:1; rSTs:1)
          • Hymenobacter qilianensis (isolates:2; rSTs:1)
          • Hymenobacter radiodurans (isolates:1; rSTs:1)
          • Hymenobacter rigui (isolates:1; rSTs:1)
          • Hymenobacter roseosalivarius (isolates:1; rSTs:1)
          • Hymenobacter rubidus (isolates:1; rSTs:1)
          • Hymenobacter rubripertinctus (isolates:1; rSTs:1)
          • Hymenobacter ruricola (isolates:1; rSTs:1)
          • Hymenobacter saemangeumensis (isolates:1; rSTs:1)
          • Hymenobacter sedentarius (isolates:1; rSTs:1)
          • Hymenobacter sediminicola (isolates:1; rSTs:1)
          • Hymenobacter sediminis (isolates:1; rSTs:1)
          • Hymenobacter segetis (isolates:1)
          • Hymenobacter setariae (isolates:1; rSTs:1)
          • Hymenobacter siberiensis (isolates:3; rSTs:3 tree)
          • Hymenobacter sp. (isolates:45; rSTs:38 tree)
          • Hymenobacter sublimis (isolates:1; rSTs:1)
          • Hymenobacter swuensis (isolates:1; rSTs:1)
          • Hymenobacter taeanensis (isolates:1; rSTs:1)
          • Hymenobacter telluris (isolates:1; rSTs:1)
          • Hymenobacter terrenus (isolates:1; rSTs:1)
          • Hymenobacter terrestris (isolates:1; rSTs:1)
          • Hymenobacter terricola (isolates:1; rSTs:1)
          • Hymenobacter tibetensis (isolates:1; rSTs:1)
          • Hymenobacter translucens (isolates:1; rSTs:1)
          • Hymenobacter volaticus (isolates:1; rSTs:1)
          • Hymenobacter wooponensis (isolates:1; rSTs:1)
          • Hymenobacter yonginensis (isolates:1; rSTs:1)
        • Nibribacter (isolates:2; rSTs:2)
          • Nibribacter koreensis (isolates:1; rSTs:1)
          • Nibribacter ruber (isolates:1; rSTs:1)
        • Pontibacter (isolates:59; rSTs:49 tree)
          • Pontibacter actiniarum (isolates:3; rSTs:1)
          • Pontibacter akesuensis (isolates:3; rSTs:1)
          • Pontibacter amylolyticus (isolates:1; rSTs:1)
          • Pontibacter anaerobius (isolates:1; rSTs:1)
          • Pontibacter aquaedesilientis (isolates:1; rSTs:1)
          • Pontibacter arcticus (isolates:1; rSTs:1)
          • Pontibacter aydingkolensis (isolates:2; rSTs:1)
          • Pontibacter beigongshangensis (isolates:1; rSTs:1)
          • Pontibacter burrus (isolates:1; rSTs:1)
          • Pontibacter cellulosilyticus (isolates:1; rSTs:1)
          • Pontibacter chinhatensis (isolates:1; rSTs:1)
          • Pontibacter chitinilyticus (isolates:1; rSTs:1)
          • Pontibacter deserti (isolates:1; rSTs:1)
          • Pontibacter diazotrophicus (isolates:1; rSTs:1)
          • Pontibacter fetidus (isolates:1; rSTs:1)
          • Pontibacter flavimaris (isolates:1; rSTs:1)
          • Pontibacter harenae (isolates:1)
          • Pontibacter indicus (isolates:1; rSTs:1)
          • Pontibacter kalidii (isolates:1; rSTs:1)
          • Pontibacter korlensis (isolates:1; rSTs:1)
          • Pontibacter liquoris (isolates:1; rSTs:1)
          • Pontibacter litorisediminis (isolates:1; rSTs:1)
          • Pontibacter lucknowensis (isolates:1; rSTs:1)
          • Pontibacter mangrovi (isolates:1; rSTs:1)
          • Pontibacter mucosus (isolates:1; rSTs:1)
          • Pontibacter oryzae (isolates:1; rSTs:1)
          • Pontibacter pamirensis (isolates:1; rSTs:1)
          • Pontibacter populi (isolates:1; rSTs:1)
          • Pontibacter pudoricolor (isolates:1; rSTs:1)
          • Pontibacter qinzhouensis (isolates:1; rSTs:1)
          • Pontibacter ramchanderi (isolates:1; rSTs:1)
          • Pontibacter roseus (isolates:1; rSTs:1)
          • Pontibacter ruber (isolates:1; rSTs:1)
          • Pontibacter russatus (isolates:1; rSTs:1)
          • Pontibacter saemangeumensis (isolates:1; rSTs:1)
          • Pontibacter silvestris (isolates:1; rSTs:1)
          • Pontibacter sp. (isolates:14; rSTs:11 tree)
          • Pontibacter ummariensis (isolates:2; rSTs:1)
          • Pontibacter virosus (isolates:1; rSTs:1)
          • Pontibacter vulgaris (isolates:1; rSTs:1)
        • Rufibacter (isolates:25; rSTs:14 tree)
          • Rufibacter aurantiacus (isolates:1; rSTs:1)
          • Rufibacter glacialis (isolates:2; rSTs:1)
          • Rufibacter hautae (isolates:1; rSTs:1)
          • Rufibacter immobilis (isolates:1; rSTs:1)
          • Rufibacter latericius (isolates:1; rSTs:1)
          • Rufibacter quisquiliarum (isolates:1; rSTs:1)
          • Rufibacter radiotolerans (isolates:1; rSTs:1)
          • Rufibacter roseolus (isolates:1; rSTs:1)
          • Rufibacter roseus (isolates:1; rSTs:1)
          • Rufibacter ruber (isolates:1; rSTs:1)
          • Rufibacter sediminis (isolates:2; rSTs:1)
          • Rufibacter sp. (isolates:11; rSTs:2 tree)
          • Rufibacter tibetensis (isolates:1; rSTs:1)
        • Sabulibacter (isolates:1; rSTs:1)
          • Sabulibacter ruber (isolates:1; rSTs:1)
      • Leadbetterellaceae (isolates:17; rSTs:16 tree)
        • Arcticibacterium (isolates:1; rSTs:1)
          • Arcticibacterium luteifluviistationis (isolates:1; rSTs:1)
        • Emticicia (isolates:12; rSTs:12 tree)
          • Emticicia agri (isolates:1; rSTs:1)
          • Emticicia aquatica (isolates:1; rSTs:1)
          • Emticicia aquatilis (isolates:1; rSTs:1)
          • Emticicia fluvialis (isolates:1; rSTs:1)
          • Emticicia oligotrophica (isolates:1; rSTs:1)
          • Emticicia soli (isolates:1; rSTs:1)
          • Emticicia sp. (isolates:6; rSTs:6 tree)
        • Jiulongibacter (isolates:2; rSTs:1)
          • Jiulongibacter sediminis (isolates:2; rSTs:1)
        • Leadbetterella (isolates:1; rSTs:1)
          • Leadbetterella byssophila (isolates:1; rSTs:1)
        • Marinilongibacter (isolates:1; rSTs:1)
          • Marinilongibacter aquaticus (isolates:1; rSTs:1)
      • Mangrovivirgaceae (isolates:2; rSTs:2)
        • Mangrovivirga (isolates:2; rSTs:2)
          • Mangrovivirga cuniculi (isolates:1; rSTs:1)
          • Mangrovivirga halotolerans (isolates:1; rSTs:1)
      • Marivirgaceae (isolates:12; rSTs:9 tree)
        • Marivirga (isolates:12; rSTs:9 tree)
          • Marivirga arenosa (isolates:2; rSTs:2)
          • Marivirga atlantica (isolates:1; rSTs:1)
          • Marivirga aurantiaca (isolates:1; rSTs:1)
          • Marivirga harenae (isolates:1; rSTs:1)
          • Marivirga lumbricoides (isolates:2; rSTs:1)
          • Marivirga salinae (isolates:1; rSTs:1)
          • Marivirga sericea (isolates:1; rSTs:1)
          • Marivirga tractuosa (isolates:3; rSTs:1)
      • Microscillaceae (isolates:2; rSTs:2)
        • Eisenibacter (isolates:1; rSTs:1)
          • Eisenibacter elegans (isolates:1; rSTs:1)
        • Microscilla (isolates:1; rSTs:1)
          • Microscilla marina (isolates:1; rSTs:1)
      • Persicobacteraceae (isolates:7; rSTs:6 tree)
        • Aureibacter (isolates:2; rSTs:1)
          • Aureibacter tunicatorum (isolates:2; rSTs:1)
        • Fulvitalea (isolates:1; rSTs:1)
          • Fulvitalea axinellae (isolates:1; rSTs:1)
        • Persicobacter (isolates:4; rSTs:4 tree)
          • Persicobacter diffluens (isolates:1; rSTs:1)
          • Persicobacter psychrovividus (isolates:1; rSTs:1)
          • Persicobacter sp. (isolates:2; rSTs:2)
      • Raineyaceae (isolates:1; rSTs:1)
        • Raineya (isolates:1; rSTs:1)
          • Raineya orbicola (isolates:1; rSTs:1)
      • Reichenbachiellaceae (isolates:13; rSTs:13 tree)
        • Ekhidna (isolates:2; rSTs:2)
          • Ekhidna lutea (isolates:1; rSTs:1)
          • Ekhidna sp. (isolates:1; rSTs:1)
        • Marinoscillum (isolates:2; rSTs:2)
          • Marinoscillum furvescens (isolates:1; rSTs:1)
          • Marinoscillum pacificum (isolates:1; rSTs:1)
        • Reichenbachiella (isolates:9; rSTs:9 tree)
          • Reichenbachiella agariperforans (isolates:2; rSTs:2)
          • Reichenbachiella agarivorans (isolates:1; rSTs:1)
          • Reichenbachiella carrageenanivorans (isolates:1; rSTs:1)
          • Reichenbachiella faecimaris (isolates:1; rSTs:1)
          • Reichenbachiella sp. (isolates:2; rSTs:2 tree)
          • Reichenbachiella ulvae (isolates:1; rSTs:1)
          • Reichenbachiella versicolor (isolates:1; rSTs:1)
      • Rhodocytophagaceae (isolates:4; rSTs:4 tree)
        • Xanthocytophaga (isolates:4; rSTs:4 tree)
          • Xanthocytophaga agilis (isolates:1; rSTs:1)
          • Xanthocytophaga flavus (isolates:3; rSTs:3 tree)
      • Roseivirgaceae (isolates:20; rSTs:13 tree)
        • Roseivirga (isolates:20; rSTs:13 tree)
          • Roseivirga echinicomitans (isolates:1; rSTs:1)
          • Roseivirga ehrenbergii (isolates:2; rSTs:1)
          • Roseivirga misakiensis (isolates:1; rSTs:1)
          • Roseivirga pacifica (isolates:8; rSTs:3 tree)
          • Roseivirga seohaensis (isolates:2; rSTs:2)
          • Roseivirga sp. (isolates:1; rSTs:1)
          • Roseivirga spongicola (isolates:2; rSTs:2)
          • Roseivirga thermotolerans (isolates:3; rSTs:2)
      • Shiellaceae (isolates:1; rSTs:1)
        • Shiella (isolates:1; rSTs:1)
          • Shiella aurantiaca (isolates:1; rSTs:1)
      • Spirosomataceae (isolates:97; rSTs:86 tree)
        • Arsenicibacter (isolates:1; rSTs:1)
          • Arsenicibacter rosenii (isolates:1; rSTs:1)
        • Arundinibacter (isolates:1; rSTs:1)
          • Arundinibacter roseus (isolates:1; rSTs:1)
        • Dyadobacter (isolates:61; rSTs:50 tree)
          • Dyadobacter alkalitolerans (isolates:2; rSTs:1)
          • Dyadobacter arcticus (isolates:1; rSTs:1)
          • Dyadobacter beijingensis (isolates:2; rSTs:1)
          • Dyadobacter bucti (isolates:1; rSTs:1)
          • Dyadobacter chenhuakuii (isolates:3; rSTs:2)
          • Dyadobacter chenwenxiniae (isolates:3; rSTs:3 tree)
          • Dyadobacter crusticola (isolates:1; rSTs:1)
          • Dyadobacter diqingensis (isolates:1)
          • Dyadobacter endophyticus (isolates:1; rSTs:1)
          • Dyadobacter fanqingshengii (isolates:3; rSTs:2)
          • Dyadobacter fermentans (isolates:1; rSTs:1)
          • Dyadobacter flavalbus (isolates:1; rSTs:1)
          • Dyadobacter frigoris (isolates:2; rSTs:1)
          • Dyadobacter jejuensis (isolates:1; rSTs:1)
          • Dyadobacter jiangsuensis (isolates:1; rSTs:1)
          • Dyadobacter koreensis (isolates:1; rSTs:1)
          • Dyadobacter luteus (isolates:1; rSTs:1)
          • Dyadobacter luticola (isolates:1; rSTs:1)
          • Dyadobacter pollutisoli (isolates:2; rSTs:1)
          • Dyadobacter psychrophilus (isolates:1; rSTs:1)
          • Dyadobacter psychrotolerans (isolates:1; rSTs:1)
          • Dyadobacter sandarakinus (isolates:1; rSTs:1)
          • Dyadobacter sediminis (isolates:2; rSTs:1)
          • Dyadobacter soli (isolates:1; rSTs:1)
          • Dyadobacter sp. (isolates:24; rSTs:21 tree)
          • Dyadobacter subterraneus (isolates:1; rSTs:1)
          • Dyadobacter tibetensis (isolates:1; rSTs:1)
        • Fibrella (isolates:4; rSTs:4 tree)
          • Fibrella aestuarina (isolates:1; rSTs:1)
          • Fibrella aquatilis (isolates:1; rSTs:1)
          • Fibrella forsythiae (isolates:1; rSTs:1)
          • Fibrella rubiginis (isolates:1; rSTs:1)
        • Fibrisoma (isolates:2; rSTs:2)
          • Fibrisoma limi (isolates:1; rSTs:1)
          • Fibrisoma montanum (isolates:1; rSTs:1)
        • Fibrivirga (isolates:1; rSTs:1)
          • Fibrivirga algicola (isolates:1; rSTs:1)
        • Larkinella (isolates:10; rSTs:10 tree)
          • Larkinella arboricola (isolates:1; rSTs:1)
          • Larkinella humicola (isolates:1; rSTs:1)
          • Larkinella insperata (isolates:1; rSTs:1)
          • Larkinella knui (isolates:1; rSTs:1)
          • Larkinella punicea (isolates:1; rSTs:1)
          • Larkinella rosea (isolates:1; rSTs:1)
          • Larkinella soli (isolates:1; rSTs:1)
          • Larkinella sp. (isolates:2; rSTs:2)
          • Larkinella terrae (isolates:1; rSTs:1)
        • Nibrella (isolates:2; rSTs:2)
          • Nibrella saemangeumensis (isolates:1; rSTs:1)
          • Nibrella viscosa (isolates:1; rSTs:1)
        • Persicitalea (isolates:1; rSTs:1)
          • Persicitalea jodogahamensis (isolates:1; rSTs:1)
        • Ravibacter (isolates:1; rSTs:1)
          • Ravibacter arvi (isolates:1; rSTs:1)
        • Runella (isolates:10; rSTs:10 tree)
          • Runella aurantiaca (isolates:1; rSTs:1)
          • Runella defluvii (isolates:1; rSTs:1)
          • Runella limosa (isolates:1; rSTs:1)
          • Runella rosea (isolates:1; rSTs:1)
          • Runella salmonicolor (isolates:1; rSTs:1)
          • Runella slithyformis (isolates:1; rSTs:1)
          • Runella sp. (isolates:3; rSTs:3 tree)
          • Runella zeae (isolates:1; rSTs:1)
        • Telluribacter (isolates:2; rSTs:2)
          • Telluribacter humicola (isolates:1; rSTs:1)
          • Telluribacter sp. (isolates:1; rSTs:1)
        • Tellurirhabdus (isolates:1; rSTs:1)
          • Tellurirhabdus rosea (isolates:1; rSTs:1)
      • Splendidivirgaceae (isolates:2)
        • Agaribacillus (isolates:1)
          • Agaribacillus aureus (isolates:1)
        • Splendidivirga (isolates:1)
          • Splendidivirga corallicola (isolates:1)
      • Thermoflexibacteraceae (isolates:2; rSTs:2)
        • Rhodoflexus (isolates:1; rSTs:1)
          • Rhodoflexus caldus (isolates:1; rSTs:1)
        • Thermoflexibacter (isolates:1; rSTs:1)
          • Thermoflexibacter ruber (isolates:1; rSTs:1)
      • Thermonemataceae (isolates:2; rSTs:2)
        • Thermonema (isolates:2; rSTs:2)
          • Thermonema lapsum (isolates:1; rSTs:1)
          • Thermonema rossianum (isolates:1; rSTs:1)
  • Flavobacteriia (isolates:4171; rSTs:2667)
    • Flavobacteriales (isolates:4171; rSTs:2667)
      • Blattabacteriaceae (isolates:46; rSTs:41 tree)
        • Blattabacterium (isolates:46; rSTs:41 tree)
          • Blattabacterium clevelandi (isolates:1; rSTs:1)
          • Blattabacterium cuenoti (isolates:26; rSTs:23 tree)
          • Blattabacterium punctulatus (isolates:10; rSTs:10 tree)
          • Blattabacterium sp. (isolates:9; rSTs:7 tree)
      • Crocinitomicaceae (isolates:14; rSTs:14 tree)
        • Brumimicrobium (isolates:5; rSTs:5 tree)
          • Brumimicrobium aurantiacum (isolates:1; rSTs:1)
          • Brumimicrobium glaciale (isolates:1; rSTs:1)
          • Brumimicrobium mesophilum (isolates:1; rSTs:1)
          • Brumimicrobium oceani (isolates:1; rSTs:1)
          • Brumimicrobium salinarum (isolates:1; rSTs:1)
        • Crocinitomix (isolates:2; rSTs:2)
          • Crocinitomix algicola (isolates:1; rSTs:1)
          • Crocinitomix catalasitica (isolates:1; rSTs:1)
        • Fluviicola (isolates:2; rSTs:2)
          • Fluviicola chungangensis (isolates:1; rSTs:1)
          • Fluviicola taffensis (isolates:1; rSTs:1)
        • Lishizhenia (isolates:1; rSTs:1)
          • Lishizhenia tianjinensis (isolates:1; rSTs:1)
        • Paracrocinitomix (isolates:1; rSTs:1)
          • Paracrocinitomix mangrovi (isolates:1; rSTs:1)
        • Putridiphycobacter (isolates:1; rSTs:1)
          • Putridiphycobacter roseus (isolates:1; rSTs:1)
        • Taishania (isolates:1; rSTs:1)
          • Taishania pollutisoli (isolates:1; rSTs:1)
        • Wandonia (isolates:1; rSTs:1)
          • Wandonia haliotis (isolates:1; rSTs:1)
      • Cryomorphaceae (isolates:3; rSTs:1)
        • Acidiluteibacter (isolates:1; rSTs:1)
          • Acidiluteibacter ferrifornacis (isolates:1; rSTs:1)
        • Candidatus Marisimplicoccus (isolates:1)
          • Candidatus Marisimplicoccus framensis (isolates:1)
        • Cryomorpha (isolates:1)
          • Cryomorpha ignava (isolates:1)
      • Flavobacteriaceae (isolates:2515; rSTs:1835)
        • Abyssalbus (isolates:1; rSTs:1)
          • Abyssalbus ytuae (isolates:1; rSTs:1)
        • Aegicerativicinus (isolates:1; rSTs:1)
          • Aegicerativicinus sediminis (isolates:1; rSTs:1)
        • Aequorivita (isolates:35; rSTs:28 tree)
          • Aequorivita antarctica (isolates:2; rSTs:2)
          • Aequorivita aquimaris (isolates:1; rSTs:1)
          • Aequorivita aurantiaca (isolates:1; rSTs:1)
          • Aequorivita capsosiphonis (isolates:1; rSTs:1)
          • Aequorivita echinoideorum (isolates:1; rSTs:1)
          • Aequorivita iocasae (isolates:1; rSTs:1)
          • Aequorivita lipolytica (isolates:2; rSTs:1)
          • Aequorivita marina (isolates:1; rSTs:1)
          • Aequorivita sediminis (isolates:1; rSTs:1)
          • Aequorivita sinensis (isolates:4; rSTs:4 tree)
          • Aequorivita soesokkakensis (isolates:1; rSTs:1)
          • Aequorivita sp. (isolates:10; rSTs:7 tree)
          • Aequorivita sublithincola (isolates:3; rSTs:1)
          • Aequorivita todarodis (isolates:1; rSTs:1)
          • Aequorivita viscosa (isolates:2; rSTs:1)
          • Aequorivita vitellina (isolates:1; rSTs:1)
          • Aequorivita vladivostokensis (isolates:1; rSTs:1)
          • Aequorivita xiaoshiensis (isolates:1; rSTs:1)
        • Aestuariibaculum (isolates:8; rSTs:6 tree)
          • Aestuariibaculum lutulentum (isolates:2; rSTs:1)
          • Aestuariibaculum marinum (isolates:1; rSTs:1)
          • Aestuariibaculum sediminum (isolates:1; rSTs:1)
          • Aestuariibaculum sp. (isolates:2; rSTs:2)
          • Aestuariibaculum suncheonense (isolates:2; rSTs:1)
        • Aestuariivivens (isolates:8; rSTs:8 tree)
          • Aestuariivivens insulae (isolates:1; rSTs:1)
          • Aestuariivivens marinum (isolates:2; rSTs:2)
          • Aestuariivivens sediminicola (isolates:2; rSTs:2)
          • Aestuariivivens sediminis (isolates:2; rSTs:2)
          • Aestuariivivens sp. (isolates:1; rSTs:1)
        • Aggregatimonas (isolates:1; rSTs:1)
          • Aggregatimonas sangjinii (isolates:1; rSTs:1)
        • Algibacter (isolates:27; rSTs:22 tree)
          • Algibacter agarivorans (isolates:1; rSTs:1)
          • Algibacter amylolyticus (isolates:3; rSTs:1)
          • Algibacter aquimarinus (isolates:1; rSTs:1)
          • Algibacter lectus (isolates:7; rSTs:5 tree)
          • Algibacter luteus (isolates:3; rSTs:2)
          • Algibacter marinivivus (isolates:1; rSTs:1)
          • Algibacter mikhailovii (isolates:2; rSTs:2)
          • Algibacter miyuki (isolates:1; rSTs:1)
          • Algibacter onchidii (isolates:1; rSTs:1)
          • Algibacter pacificus (isolates:1; rSTs:1)
          • Algibacter pectinivorans (isolates:1; rSTs:1)
          • Algibacter sp. (isolates:5; rSTs:5 tree)
        • Allomuricauda (isolates:2; rSTs:2 tree)
          • Muricauda brasiliensis (isolates:1; rSTs:1)
          • [Muricauda] lutisoli (isolates:1; rSTs:1)
        • Altibacter (isolates:1; rSTs:1)
          • Altibacter lentus (isolates:1; rSTs:1)
        • Amniculibacterium (isolates:2; rSTs:2)
          • Amniculibacterium aquaticum (isolates:1; rSTs:1)
          • Amniculibacterium sp. (isolates:1; rSTs:1)
        • Antarcticibacterium (isolates:4; rSTs:3 tree)
          • Antarcticibacterium arcticum (isolates:1; rSTs:1)
          • Antarcticibacterium flavum (isolates:1; rSTs:1)
          • Antarcticibacterium sp. (isolates:2; rSTs:1)
        • Aquaticitalea (isolates:1; rSTs:1)
          • Aquaticitalea lipolytica (isolates:1; rSTs:1)
        • Aquimarina (isolates:70; rSTs:50 tree)
          • Aquimarina acroporae (isolates:1; rSTs:1)
          • Aquimarina addita (isolates:1; rSTs:1)
          • Aquimarina agarilytica (isolates:1; rSTs:1)
          • Aquimarina agarivorans (isolates:1; rSTs:1)
          • Aquimarina aggregata (isolates:3; rSTs:2)
          • Aquimarina algicola (isolates:1; rSTs:1)
          • Aquimarina algiphila (isolates:9; rSTs:5 tree)
          • Aquimarina amphilecti (isolates:1; rSTs:1)
          • Aquimarina aquimarini (isolates:2; rSTs:1)
          • Aquimarina atlantica (isolates:1; rSTs:1)
          • Aquimarina brevivitae (isolates:1; rSTs:1)
          • Aquimarina gracilis (isolates:2; rSTs:1)
          • Aquimarina intermedia (isolates:1; rSTs:1)
          • Aquimarina latercula (isolates:1; rSTs:1)
          • Aquimarina litoralis (isolates:2; rSTs:1)
          • Aquimarina longa (isolates:1; rSTs:1)
          • Aquimarina macrocephali (isolates:1; rSTs:1)
          • Aquimarina megaterium (isolates:1; rSTs:1)
          • Aquimarina muelleri (isolates:3; rSTs:1)
          • Aquimarina mytili (isolates:2; rSTs:1)
          • Aquimarina pacifica (isolates:1; rSTs:1)
          • Aquimarina sediminis (isolates:1; rSTs:1)
          • Aquimarina sp. (isolates:28; rSTs:21 tree)
          • Aquimarina spinulae (isolates:3; rSTs:1)
          • Aquimarina spongiae (isolates:1; rSTs:1)
        • Arenibacter (isolates:30; rSTs:26 tree)
          • Arenibacter algicola (isolates:3; rSTs:3 tree)
          • Arenibacter amylolyticus (isolates:1; rSTs:1)
          • Arenibacter aquaticus (isolates:1; rSTs:1)
          • Arenibacter arenosicollis (isolates:1; rSTs:1)
          • Arenibacter catalasegens (isolates:1; rSTs:1)
          • Arenibacter certesii (isolates:2; rSTs:1)
          • Arenibacter echinorum (isolates:1; rSTs:1)
          • Arenibacter hampyeongensis (isolates:1; rSTs:1)
          • Arenibacter lacus (isolates:1; rSTs:1)
          • Arenibacter latericius (isolates:1; rSTs:1)
          • Arenibacter nanhaiticus (isolates:1; rSTs:1)
          • Arenibacter palladensis (isolates:3; rSTs:3 tree)
          • Arenibacter sp. (isolates:12; rSTs:9 tree)
          • Arenibacter troitsensis (isolates:1; rSTs:1)
        • Ascidiimonas (isolates:1; rSTs:1)
          • Ascidiimonas aurantiaca (isolates:1; rSTs:1)
        • Asprobacillus (isolates:1; rSTs:1)
          • Asprobacillus argos (isolates:1; rSTs:1)
        • Aurantibacter (isolates:2; rSTs:2)
          • Aurantibacter aestuarii (isolates:1; rSTs:1)
          • Aurantibacter crassamenti (isolates:1; rSTs:1)
        • Aureibaculum (isolates:6; rSTs:1)
          • Aureibaculum algae (isolates:1)
          • Aureibaculum flavum (isolates:1)
          • Aureibaculum luteum (isolates:1)
          • Aureibaculum marinum (isolates:1; rSTs:1)
          • Aureibaculum sp. (isolates:2)
        • Aureicoccus (isolates:1; rSTs:1)
          • Aureicoccus marinus (isolates:1; rSTs:1)
        • Aureisphaera (isolates:1; rSTs:1)
          • Aureisphaera galaxeae (isolates:1; rSTs:1)
        • Aureitalea (isolates:1; rSTs:1)
          • Aureitalea marina (isolates:1; rSTs:1)
        • Aureivirga (isolates:2; rSTs:2)
          • Aureivirga marina (isolates:1; rSTs:1)
          • Aureivirga sp. (isolates:1; rSTs:1)
        • Autumnicola (isolates:6; rSTs:4 tree)
          • Autumnicola edwardsiae (isolates:1)
          • Autumnicola lenta (isolates:1)
          • Autumnicola musiva (isolates:1; rSTs:1)
          • Autumnicola patrickiae (isolates:1; rSTs:1)
          • Autumnicola psychrophila (isolates:1; rSTs:1)
          • Autumnicola tepida (isolates:1; rSTs:1)
        • Avrilella (isolates:1; rSTs:1)
          • Avrilella dinanensis (isolates:1; rSTs:1)
        • Bizionia (isolates:10; rSTs:9 tree)
          • Bizionia algoritergicola (isolates:1; rSTs:1)
          • Bizionia arctica (isolates:1; rSTs:1)
          • Bizionia argentinensis (isolates:1; rSTs:1)
          • Bizionia echini (isolates:1; rSTs:1)
          • Bizionia gelidisalsuginis (isolates:1; rSTs:1)
          • Bizionia myxarmorum (isolates:1; rSTs:1)
          • Bizionia paragorgiae (isolates:1; rSTs:1)
          • Bizionia saleffrena (isolates:1; rSTs:1)
          • Bizionia sp. (isolates:2; rSTs:1)
        • Candidatus Arcticimaribacter (isolates:5; rSTs:1)
          • Candidatus Arcticimaribacter forsetii (isolates:1; rSTs:1)
          • Candidatus Arcticimaribacter sp. (isolates:4)
        • Capnocytophaga (isolates:109; rSTs:86 tree)
          • Capnocytophaga bilenii (isolates:1; rSTs:1)
          • Capnocytophaga canimorsus (isolates:18; rSTs:12 tree)
          • Capnocytophaga canis (isolates:9; rSTs:8 tree)
          • Capnocytophaga catalasegens (isolates:3; rSTs:1)
          • Capnocytophaga cynodegmi (isolates:8; rSTs:5 tree)
          • Capnocytophaga endodontalis (isolates:1; rSTs:1)
          • Capnocytophaga felis (isolates:2; rSTs:2)
          • Capnocytophaga genosp. AHN8471 (isolates:5; rSTs:4 tree)
          • Capnocytophaga gingivalis (isolates:4; rSTs:4 tree)
          • Capnocytophaga granulosa (isolates:3; rSTs:1)
          • Capnocytophaga haemolytica (isolates:3; rSTs:1)
          • Capnocytophaga leadbetteri (isolates:2; rSTs:2)
          • Capnocytophaga ochracea (isolates:14; rSTs:11 tree)
          • Capnocytophaga periodontitidis (isolates:2; rSTs:2)
          • Capnocytophaga sp. (isolates:20; rSTs:19 tree)
          • Capnocytophaga sputigena (isolates:10; rSTs:8 tree)
          • Capnocytophaga stomatis (isolates:4; rSTs:4 tree)
        • Cellulophaga (isolates:37; rSTs:35 tree)
          • Cellulophaga algicola (isolates:1; rSTs:1)
          • Cellulophaga baltica (isolates:11; rSTs:12 tree)
          • Cellulophaga fucicola (isolates:1; rSTs:1)
          • Cellulophaga geojensis (isolates:1; rSTs:1)
          • Cellulophaga lytica (isolates:5; rSTs:4 tree)
          • Cellulophaga omnivescoria (isolates:2; rSTs:2)
          • Cellulophaga sp. (isolates:15; rSTs:13 tree)
          • Cellulophaga tyrosinoxydans (isolates:1; rSTs:1)
        • Cerina (isolates:1; rSTs:1)
          • Cerina litoralis (isolates:1; rSTs:1)
        • Changchengzhania (isolates:1; rSTs:1)
          • Changchengzhania lutea (isolates:1; rSTs:1)
        • Christiangramia (isolates:24; rSTs:22 tree)
          • Christiangramia aestuarii (isolates:1; rSTs:1)
          • Christiangramia crocea (isolates:1; rSTs:1)
          • Christiangramia echinicola (isolates:2; rSTs:2)
          • Christiangramia flava (isolates:2; rSTs:1)
          • Christiangramia forsetii (isolates:2; rSTs:1)
          • Christiangramia fulva (isolates:1; rSTs:1)
          • Christiangramia gaetbulicola (isolates:1; rSTs:1)
          • Christiangramia lutea (isolates:1; rSTs:1)
          • Christiangramia oceanisediminis (isolates:1; rSTs:1)
          • Christiangramia portivictoriae (isolates:1; rSTs:1)
          • Christiangramia sabulilitoris (isolates:1; rSTs:1)
          • Christiangramia salexigens (isolates:1; rSTs:1)
          • Christiangramia sediminis (isolates:1; rSTs:1)
          • Christiangramia sp. (isolates:2; rSTs:2)
          • Gramella jeungdoensis (isolates:1; rSTs:1)
          • Gramella sp. (isolates:5; rSTs:5 tree)
        • Cochleicola (isolates:1; rSTs:1)
          • Cochleicola gelatinilyticus (isolates:1; rSTs:1)
        • Confluentibacter (isolates:4; rSTs:4 tree)
          • Confluentibacter citreus (isolates:1; rSTs:1)
          • Confluentibacter flavum (isolates:1; rSTs:1)
          • Confluentibacter lentus (isolates:1; rSTs:1)
          • Confluentibacter sediminis (isolates:1; rSTs:1)
        • Constantimarinum (isolates:1; rSTs:1)
          • Constantimarinum furrinae (isolates:1; rSTs:1)
        • Corallibacter (isolates:1; rSTs:1)
          • Corallibacter vietnamensis (isolates:1; rSTs:1)
        • Costertonia (isolates:1; rSTs:1)
          • Costertonia aggregata (isolates:1; rSTs:1)
        • Croceibacter (isolates:3; rSTs:3 tree)
          • Croceibacter atlanticus (isolates:3; rSTs:3 tree)
        • Croceitalea (isolates:6; rSTs:6 tree)
          • Croceitalea dokdonensis (isolates:1; rSTs:1)
          • Croceitalea rosinachiae (isolates:1; rSTs:1)
          • Croceitalea sp. (isolates:3; rSTs:3 tree)
          • Croceitalea vernalis (isolates:1; rSTs:1)
        • Croceivirga (isolates:6; rSTs:4 tree)
          • Croceivirga lutea (isolates:2; rSTs:1)
          • Croceivirga radicis (isolates:2; rSTs:1)
          • Croceivirga sp. (isolates:1; rSTs:1)
          • Croceivirga thetidis (isolates:1; rSTs:1)
        • Dokdonia (isolates:11; rSTs:9 tree)
          • Dokdonia donghaensis (isolates:2; rSTs:1)
          • Dokdonia pacifica (isolates:2; rSTs:1)
          • Dokdonia sinensis (isolates:1; rSTs:1)
          • Dokdonia sp. (isolates:6; rSTs:6 tree)
        • Eudoraea (isolates:2; rSTs:2)
          • Eudoraea adriatica (isolates:1; rSTs:1)
          • Eudoraea chungangensis (isolates:1; rSTs:1)
        • Euzebyella (isolates:3; rSTs:2)
          • Euzebyella marina (isolates:2; rSTs:1)
          • Euzebyella saccharophila (isolates:1; rSTs:1)
        • Flagellimonas (isolates:57; rSTs:49 tree)
          • Flagellimonas abyssi (isolates:1; rSTs:1)
          • Flagellimonas aequoris (isolates:2; rSTs:1)
          • Flagellimonas algicola (isolates:1; rSTs:1)
          • Flagellimonas allohymeniacidonis (isolates:1; rSTs:1)
          • Flagellimonas alvinocaridis (isolates:1; rSTs:1)
          • Flagellimonas amoyensis (isolates:1; rSTs:1)
          • Flagellimonas amphidinii (isolates:1; rSTs:1)
          • Flagellimonas aquimarina (isolates:1; rSTs:1)
          • Flagellimonas aurea (isolates:1; rSTs:1)
          • Flagellimonas baculiformis (isolates:1; rSTs:1)
          • Flagellimonas beolgyonensis (isolates:1; rSTs:1)
          • Flagellimonas chongwuensis (isolates:1; rSTs:1)
          • Flagellimonas crocea (isolates:1; rSTs:1)
          • Flagellimonas eckloniae (isolates:1; rSTs:1)
          • Flagellimonas flava (isolates:1; rSTs:1)
          • Flagellimonas hadalis (isolates:1; rSTs:1)
          • Flagellimonas halotolerans (isolates:2; rSTs:1)
          • Flagellimonas hymeniacidonis (isolates:1; rSTs:1)
          • Flagellimonas lutaonensis (isolates:1; rSTs:1)
          • Flagellimonas lutimaris (isolates:1; rSTs:1)
          • Flagellimonas marinaquae (isolates:1; rSTs:1)
          • Flagellimonas maritima (isolates:1; rSTs:1)
          • Flagellimonas meishanensis (isolates:1; rSTs:1)
          • Flagellimonas meridianipacifica (isolates:1; rSTs:1)
          • Flagellimonas myxillae (isolates:1; rSTs:1)
          • Flagellimonas nanhaiensis (isolates:1; rSTs:1)
          • Flagellimonas oceanensis (isolates:1; rSTs:1)
          • Flagellimonas oceani (isolates:2; rSTs:1)
          • Flagellimonas ochracea (isolates:1; rSTs:1)
          • Flagellimonas okinawensis (isolates:1; rSTs:1)
          • Flagellimonas olearia (isolates:2; rSTs:2)
          • Flagellimonas onchidii (isolates:1; rSTs:1)
          • Flagellimonas pacifica (isolates:1; rSTs:1)
          • Flagellimonas pelagia (isolates:2; rSTs:1)
          • Flagellimonas profundi (isolates:1; rSTs:1)
          • Flagellimonas ruestringensis (isolates:1; rSTs:1)
          • Flagellimonas sediminis (isolates:1; rSTs:1)
          • Flagellimonas sp. (isolates:7; rSTs:5 tree)
          • Flagellimonas spongiicola (isolates:1; rSTs:1)
          • Flagellimonas taeanensis (isolates:4; rSTs:3 tree)
          • Flagellimonas yonaguniensis (isolates:1; rSTs:1)
          • Flagellimonas zhangzhouensis (isolates:2; rSTs:1)
        • Flavicella (isolates:2; rSTs:2)
          • Flavicella marina (isolates:1; rSTs:1)
          • Flavicella sediminum (isolates:1; rSTs:1)
        • Flavimarina (isolates:1; rSTs:1)
          • Flavimarina sp. (isolates:1; rSTs:1)
        • Flaviramulus (isolates:4; rSTs:4 tree)
          • Flaviramulus aquimarinus (isolates:1; rSTs:1)
          • Flaviramulus basaltis (isolates:1; rSTs:1)
          • Flaviramulus multivorans (isolates:1; rSTs:1)
          • Flaviramulus sp. (isolates:1; rSTs:1)
        • Flavivirga (isolates:13; rSTs:10 tree)
          • Flavivirga abyssicola (isolates:1)
          • Flavivirga algicola (isolates:1; rSTs:1)
          • Flavivirga amylovorans (isolates:2; rSTs:1)
          • Flavivirga aquatica (isolates:1; rSTs:1)
          • Flavivirga aquimarina (isolates:1; rSTs:1)
          • Flavivirga eckloniae (isolates:1; rSTs:1)
          • Flavivirga jejuensis (isolates:2; rSTs:1)
          • Flavivirga rizhaonensis (isolates:1; rSTs:1)
          • Flavivirga sp. (isolates:1; rSTs:2 tree)
          • Flavivirga spongiicola (isolates:2; rSTs:1)
        • Flavobacterium (isolates:921; rSTs:580 tree)
          • Flavobacterium acetivorans (isolates:1; rSTs:1)
          • Flavobacterium aciduliphilum (isolates:1; rSTs:1)
          • Flavobacterium aestivum (isolates:1; rSTs:1)
          • Flavobacterium agri (isolates:2; rSTs:1)
          • Flavobacterium agricola (isolates:1; rSTs:1)
          • Flavobacterium agrisoli (isolates:1; rSTs:1)
          • Flavobacterium ajazii (isolates:1; rSTs:1)
          • Flavobacterium akiainvivens (isolates:2; rSTs:1)
          • Flavobacterium album (isolates:1; rSTs:1)
          • Flavobacterium algicola (isolates:1; rSTs:1)
          • Flavobacterium algoritolerans (isolates:1; rSTs:1)
          • Flavobacterium alkalisoli (isolates:1; rSTs:1)
          • Flavobacterium alvei (isolates:1; rSTs:1)
          • Flavobacterium ammonificans (isolates:2; rSTs:2)
          • Flavobacterium ammoniigenes (isolates:1; rSTs:1)
          • Flavobacterium amnicola (isolates:1; rSTs:1)
          • Flavobacterium amniphilum (isolates:1; rSTs:1)
          • Flavobacterium anhuiense (isolates:5; rSTs:5 tree)
          • Flavobacterium antarcticum (isolates:1; rSTs:1)
          • Flavobacterium aquariorum (isolates:1; rSTs:1)
          • Flavobacterium aquaticum (isolates:1; rSTs:1)
          • Flavobacterium aquatile (isolates:3; rSTs:1)
          • Flavobacterium aquicola (isolates:1; rSTs:1)
          • Flavobacterium aquidurense (isolates:1; rSTs:1)
          • Flavobacterium aquiphilum (isolates:1; rSTs:1)
          • Flavobacterium araucananum (isolates:2; rSTs:1)
          • Flavobacterium arcticum (isolates:2; rSTs:1)
          • Flavobacterium arsenatis (isolates:1; rSTs:1)
          • Flavobacterium aurantiibacter (isolates:1; rSTs:1)
          • Flavobacterium azizsancarii (isolates:1; rSTs:1)
          • Flavobacterium azooxidireducens (isolates:1; rSTs:1)
          • Flavobacterium beibuense (isolates:1; rSTs:1)
          • Flavobacterium bernardetii (isolates:2; rSTs:1)
          • Flavobacterium bizetiae (isolates:4; rSTs:2)
          • Flavobacterium bomense (isolates:1; rSTs:1)
          • Flavobacterium branchiarum (isolates:1; rSTs:1)
          • Flavobacterium branchiicola (isolates:1; rSTs:1)
          • Flavobacterium branchiophilum (isolates:5; rSTs:3 tree)
          • Flavobacterium buctense (isolates:2; rSTs:1)
          • Flavobacterium caeni (isolates:1; rSTs:1)
          • Flavobacterium caseinilyticum (isolates:1; rSTs:1)
          • Flavobacterium cauense (isolates:3; rSTs:1)
          • Flavobacterium celericrescens (isolates:1; rSTs:1)
          • Flavobacterium cellulosilyticum (isolates:1; rSTs:1)
          • Flavobacterium cerinum (isolates:1; rSTs:1)
          • Flavobacterium channae (isolates:1; rSTs:1)
          • Flavobacterium cheniae (isolates:2; rSTs:1)
          • Flavobacterium cheonanense (isolates:1; rSTs:1)
          • Flavobacterium cheongpyeongense (isolates:1; rSTs:1)
          • Flavobacterium cheonhonense (isolates:2; rSTs:1)
          • Flavobacterium chilense (isolates:2; rSTs:1)
          • Flavobacterium chungangense (isolates:2; rSTs:1)
          • Flavobacterium chungbukense (isolates:2; rSTs:1)
          • Flavobacterium chungnamense (isolates:1; rSTs:1)
          • Flavobacterium circumlabens (isolates:2; rSTs:1)
          • Flavobacterium collinsii (isolates:3; rSTs:3 tree)
          • Flavobacterium columnare (isolates:41; rSTs:11 tree)
          • Flavobacterium commune (isolates:1; rSTs:1)
          • Flavobacterium coralii (isolates:1; rSTs:1)
          • Flavobacterium covae (isolates:7; rSTs:5 tree)
          • Flavobacterium crassostreae (isolates:2; rSTs:1)
          • Flavobacterium croceum (isolates:1; rSTs:1)
          • Flavobacterium crocinum (isolates:1; rSTs:1)
          • Flavobacterium cucumis (isolates:1; rSTs:1)
          • Flavobacterium cupreum (isolates:1; rSTs:1)
          • Flavobacterium cupriresistens (isolates:2; rSTs:1)
          • Flavobacterium cutihirudinis (isolates:1; rSTs:1)
          • Flavobacterium cyanobacteriorum (isolates:1; rSTs:1)
          • Flavobacterium cyclinae (isolates:1; rSTs:1)
          • Flavobacterium daejeonense (isolates:1; rSTs:1)
          • Flavobacterium daemonense (isolates:1; rSTs:1)
          • Flavobacterium dankookense (isolates:1; rSTs:1)
          • Flavobacterium dauae (isolates:1; rSTs:1)
          • Flavobacterium davisii (isolates:2; rSTs:2)
          • Flavobacterium defluvii (isolates:1; rSTs:1)
          • Flavobacterium degerlachei (isolates:1; rSTs:1)
          • Flavobacterium denitrificans (isolates:1; rSTs:1)
          • Flavobacterium difficile (isolates:1; rSTs:1)
          • Flavobacterium eburneipallidum (isolates:1; rSTs:1)
          • Flavobacterium endoglycinae (isolates:1; rSTs:1)
          • Flavobacterium endophyticum (isolates:1; rSTs:1)
          • Flavobacterium enshiense (isolates:3; rSTs:2)
          • Flavobacterium erciyesense (isolates:1; rSTs:1)
          • Flavobacterium faecale (isolates:1; rSTs:1)
          • Flavobacterium filum (isolates:1; rSTs:1)
          • Flavobacterium flabelliforme (isolates:1; rSTs:1)
          • Flavobacterium flavigenum (isolates:1; rSTs:1)
          • Flavobacterium flavipigmentatum (isolates:3; rSTs:1)
          • Flavobacterium flevense (isolates:2; rSTs:1)
          • Flavobacterium fluviale (isolates:1; rSTs:1)
          • Flavobacterium fluviatile (isolates:1; rSTs:1)
          • Flavobacterium fluvii (isolates:1; rSTs:1)
          • Flavobacterium foetidum (isolates:1; rSTs:1)
          • Flavobacterium fontis (isolates:1; rSTs:1)
          • Flavobacterium fragile (isolates:1; rSTs:1)
          • Flavobacterium franklandianum (isolates:2; rSTs:2)
          • Flavobacterium frigidarium (isolates:1; rSTs:1)
          • Flavobacterium frigidimaris (isolates:1; rSTs:1)
          • Flavobacterium frigoris (isolates:1; rSTs:1)
          • Flavobacterium frigoritolerans (isolates:1; rSTs:1)
          • Flavobacterium fryxellicola (isolates:2; rSTs:1)
          • Flavobacterium galactosidilyticum (isolates:1; rSTs:1)
          • Flavobacterium gawalongense (isolates:5; rSTs:2)
          • Flavobacterium gelatinilyticum (isolates:1; rSTs:1)
          • Flavobacterium gelidilacus (isolates:1; rSTs:1)
          • Flavobacterium geliluteum (isolates:1; rSTs:1)
          • Flavobacterium gillisiae (isolates:1; rSTs:1)
          • Flavobacterium gilvum (isolates:2; rSTs:1)
          • Flavobacterium ginsengisoli (isolates:2; rSTs:2)
          • Flavobacterium ginsengiterrae (isolates:1; rSTs:1)
          • Flavobacterium ginsenosidimutans (isolates:2; rSTs:1)
          • Flavobacterium glaciei (isolates:2; rSTs:1)
          • Flavobacterium glycines (isolates:3; rSTs:1)
          • Flavobacterium gossypii (isolates:1; rSTs:1)
          • Flavobacterium granuli (isolates:2; rSTs:1)
          • Flavobacterium gyeonganense (isolates:1; rSTs:1)
          • Flavobacterium hankyongi (isolates:2; rSTs:1)
          • Flavobacterium haoranii (isolates:2; rSTs:1)
          • Flavobacterium hercynium (isolates:2; rSTs:1)
          • Flavobacterium hibernum (isolates:3; rSTs:1)
          • Flavobacterium hibisci (isolates:1; rSTs:1)
          • Flavobacterium hiemivividum (isolates:1; rSTs:1)
          • Flavobacterium humi (isolates:1; rSTs:1)
          • Flavobacterium humidisoli (isolates:1; rSTs:1)
          • Flavobacterium hungaricum (isolates:1; rSTs:1)
          • Flavobacterium hydatis (isolates:3; rSTs:1)
          • Flavobacterium hydrocarbonoxydans (isolates:1; rSTs:1)
          • Flavobacterium hydrophilum (isolates:1; rSTs:1)
          • Flavobacterium ichthyis (isolates:1; rSTs:1)
          • Flavobacterium indicum (isolates:1; rSTs:1)
          • Flavobacterium inviolabile (isolates:1; rSTs:1)
          • Flavobacterium jejuense (isolates:1; rSTs:1)
          • Flavobacterium johnsoniae (isolates:9; rSTs:5 tree)
          • Flavobacterium jumunjinense (isolates:1; rSTs:1)
          • Flavobacterium kayseriense (isolates:2; rSTs:1)
          • Flavobacterium keumense (isolates:1; rSTs:1)
          • Flavobacterium kingsejongi (isolates:1; rSTs:1)
          • Flavobacterium lacisediminis (isolates:1; rSTs:1)
          • Flavobacterium lacus (isolates:1; rSTs:1)
          • Flavobacterium lacustre (isolates:1; rSTs:1)
          • Flavobacterium laiguense (isolates:1; rSTs:1)
          • Flavobacterium limi (isolates:2; rSTs:1)
          • Flavobacterium limicola (isolates:1; rSTs:1)
          • Flavobacterium limnophilum (isolates:1; rSTs:1)
          • Flavobacterium limnosediminis (isolates:1; rSTs:1)
          • Flavobacterium lindanitolerans (isolates:3; rSTs:1)
          • Flavobacterium lipolyticum (isolates:1; rSTs:1)
          • Flavobacterium litorale (isolates:1; rSTs:1)
          • Flavobacterium lotistagni (isolates:1; rSTs:1)
          • Flavobacterium luminosum (isolates:1; rSTs:1)
          • Flavobacterium luteolum (isolates:1; rSTs:1)
          • Flavobacterium luteum (isolates:1; rSTs:1)
          • Flavobacterium lutivivi (isolates:1; rSTs:1)
          • Flavobacterium macacae (isolates:1; rSTs:1)
          • Flavobacterium macrobrachii (isolates:2; rSTs:1)
          • Flavobacterium magnum (isolates:1; rSTs:1)
          • Flavobacterium marginilacus (isolates:1; rSTs:1)
          • Flavobacterium microcysteis (isolates:1; rSTs:1)
          • Flavobacterium micromati (isolates:1; rSTs:1)
          • Flavobacterium muglaense (isolates:2; rSTs:1)
          • Flavobacterium nackdongense (isolates:1; rSTs:1)
          • Flavobacterium nitratireducens (isolates:1; rSTs:1)
          • Flavobacterium nitrogenifigens (isolates:3; rSTs:1)
          • Flavobacterium noncentrifugens (isolates:2; rSTs:2)
          • Flavobacterium notoginsengisoli (isolates:1; rSTs:1)
          • Flavobacterium odoriferum (isolates:1; rSTs:1)
          • Flavobacterium okayamense (isolates:1; rSTs:1)
          • Flavobacterium olei (isolates:1; rSTs:1)
          • Flavobacterium omnivorum (isolates:1; rSTs:1)
          • Flavobacterium oncorhynchi (isolates:1; rSTs:1)
          • Flavobacterium oreochromis (isolates:3; rSTs:3 tree)
          • Flavobacterium orientale (isolates:1; rSTs:1)
          • Flavobacterium ovatum (isolates:1; rSTs:1)
          • Flavobacterium pallidum (isolates:1; rSTs:1)
          • Flavobacterium palustre (isolates:1; rSTs:1)
          • Flavobacterium panacagri (isolates:1; rSTs:1)
          • Flavobacterium panacis (isolates:1; rSTs:1)
          • Flavobacterium panici (isolates:2; rSTs:2)
          • Flavobacterium pectinovorum (isolates:3; rSTs:2)
          • Flavobacterium petrolei (isolates:1; rSTs:1)
          • Flavobacterium phragmitis (isolates:1; rSTs:1)
          • Flavobacterium phycosphaerae (isolates:1; rSTs:1)
          • Flavobacterium piscinae (isolates:1; rSTs:1)
          • Flavobacterium pisciphilum (isolates:1; rSTs:1)
          • Flavobacterium piscis (isolates:2; rSTs:1)
          • Flavobacterium piscisymbiosum (isolates:1; rSTs:1)
          • Flavobacterium plurextorum (isolates:2; rSTs:2)
          • Flavobacterium pokkalii (isolates:1; rSTs:1)
          • Flavobacterium potami (isolates:1; rSTs:1)
          • Flavobacterium poyangense (isolates:1; rSTs:1)
          • Flavobacterium praedii (isolates:1; rSTs:1)
          • Flavobacterium profundi (isolates:2; rSTs:1)
          • Flavobacterium proteolyticum (isolates:1; rSTs:1)
          • Flavobacterium psychraquaticum (isolates:1; rSTs:1)
          • Flavobacterium psychrolimnae (isolates:1; rSTs:1)
          • Flavobacterium psychrophilum (isolates:303; rSTs:75 tree)
          • Flavobacterium psychroterrae (isolates:1; rSTs:1)
          • Flavobacterium psychrotolerans (isolates:1; rSTs:1)
          • Flavobacterium psychrotrophum (isolates:1; rSTs:1)
          • Flavobacterium quisquiliarum (isolates:1; rSTs:1)
          • Flavobacterium rakeshii (isolates:2; rSTs:2)
          • Flavobacterium ranwuense (isolates:1; rSTs:1)
          • Flavobacterium reichenbachii (isolates:2; rSTs:1)
          • Flavobacterium resistens (isolates:2; rSTs:1)
          • Flavobacterium restrictum (isolates:1; rSTs:1)
          • Flavobacterium rhamnosiphilum (isolates:1; rSTs:1)
          • Flavobacterium rivuli (isolates:2; rSTs:1)
          • Flavobacterium saccharophilum (isolates:1; rSTs:1)
          • Flavobacterium salilacus (isolates:2; rSTs:2)
          • Flavobacterium saliperosum (isolates:2; rSTs:1)
          • Flavobacterium salmonis (isolates:1; rSTs:1)
          • Flavobacterium sandaracinum (isolates:1; rSTs:1)
          • Flavobacterium sangjuense (isolates:1; rSTs:1)
          • Flavobacterium sasangense (isolates:1; rSTs:1)
          • Flavobacterium sedimenticola (isolates:1; rSTs:1)
          • Flavobacterium sediminilitoris (isolates:1; rSTs:1)
          • Flavobacterium sediminis (isolates:1; rSTs:1)
          • Flavobacterium segetis (isolates:1; rSTs:1)
          • Flavobacterium selenitireducens (isolates:1; rSTs:1)
          • Flavobacterium seoulense (isolates:1; rSTs:1)
          • Flavobacterium sharifuzzamanii (isolates:1; rSTs:1)
          • Flavobacterium shii (isolates:1; rSTs:1)
          • Flavobacterium silvaticum (isolates:1; rSTs:1)
          • Flavobacterium silvisoli (isolates:1; rSTs:1)
          • Flavobacterium sinopsychrotolerans (isolates:1; rSTs:1)
          • Flavobacterium soli (isolates:1; rSTs:1)
          • Flavobacterium solisilvae (isolates:1; rSTs:1)
          • Flavobacterium soyae (isolates:1; rSTs:1)
          • Flavobacterium soyangense (isolates:1; rSTs:1)
          • Flavobacterium sp. (isolates:213; rSTs:200 tree)
          • Flavobacterium stagni (isolates:1; rSTs:1)
          • Flavobacterium suaedae (isolates:1; rSTs:1)
          • Flavobacterium subsaxonicum (isolates:2; rSTs:1)
          • Flavobacterium succinicans (isolates:3; rSTs:1)
          • Flavobacterium sufflavum (isolates:1; rSTs:1)
          • Flavobacterium suncheonense (isolates:2; rSTs:1)
          • Flavobacterium supellecticarium (isolates:1; rSTs:1)
          • Flavobacterium swingsii (isolates:1; rSTs:1)
          • Flavobacterium tagetis (isolates:1; rSTs:1)
          • Flavobacterium taihuense (isolates:1; rSTs:1)
          • Flavobacterium tegetincola (isolates:1; rSTs:1)
          • Flavobacterium terrae (isolates:1; rSTs:1)
          • Flavobacterium terrigena (isolates:1; rSTs:1)
          • Flavobacterium tiangeerense (isolates:1; rSTs:1)
          • Flavobacterium tibetense (isolates:1; rSTs:1)
          • Flavobacterium tistrianum (isolates:1; rSTs:1)
          • Flavobacterium tructae (isolates:4; rSTs:3 tree)
          • Flavobacterium turcicum (isolates:2; rSTs:1)
          • Flavobacterium tyrosinilyticum (isolates:1; rSTs:1)
          • Flavobacterium undicola (isolates:1; rSTs:1)
          • Flavobacterium urocaniciphilum (isolates:1; rSTs:1)
          • Flavobacterium urumqiense (isolates:1; rSTs:1)
          • Flavobacterium ustbae (isolates:1; rSTs:1)
          • Flavobacterium weaverense (isolates:1; rSTs:1)
          • Flavobacterium xanthum (isolates:1; rSTs:1)
          • Flavobacterium xinjiangense (isolates:1; rSTs:1)
          • Flavobacterium xueshanense (isolates:1; rSTs:1)
          • Flavobacterium yafengii (isolates:4; rSTs:4 tree)
          • Flavobacterium zepuense (isolates:1; rSTs:1)
          • Flavobacterium zhairuonense (isolates:1; rSTs:1)
          • [Flexibacter] sp. ATCC 35103 (isolates:1; rSTs:1)
        • Formosa (isolates:10; rSTs:9 tree)
          • Formosa agariphila (isolates:1; rSTs:1)
          • Formosa algae (isolates:4; rSTs:3 tree)
          • Formosa haliotis (isolates:1; rSTs:1)
          • Formosa maritima (isolates:1; rSTs:1)
          • Formosa sediminum (isolates:1; rSTs:1)
          • Formosa sp. (isolates:2; rSTs:2)
        • Gaetbulibacter (isolates:1; rSTs:1)
          • Gaetbulibacter saemankumensis (isolates:1; rSTs:1)
        • Galbibacter (isolates:9; rSTs:7 tree)
          • Galbibacter marinus (isolates:1; rSTs:1)
          • Galbibacter mesophilus (isolates:2; rSTs:1)
          • Galbibacter orientalis (isolates:2; rSTs:2)
          • Galbibacter pacificus (isolates:2; rSTs:1)
          • Galbibacter sp. (isolates:2; rSTs:2 tree)
        • Gangjinia (isolates:1; rSTs:1)
          • Gangjinia marincola (isolates:1; rSTs:1)
        • Gelidibacter (isolates:11; rSTs:10 tree)
          • Gelidibacter algens (isolates:2; rSTs:1)
          • Gelidibacter gilvus (isolates:1; rSTs:1)
          • Gelidibacter japonicus (isolates:2; rSTs:2)
          • Gelidibacter maritimus (isolates:1; rSTs:1)
          • Gelidibacter mesophilus (isolates:1; rSTs:1)
          • Gelidibacter pelagius (isolates:1; rSTs:1)
          • Gelidibacter salicanalis (isolates:2; rSTs:2)
          • Gelidibacter sediminis (isolates:1; rSTs:1)
        • Gillisia (isolates:10; rSTs:10 tree)
          • Gillisia hiemivivida (isolates:1; rSTs:1)
          • Gillisia limnaea (isolates:1; rSTs:1)
          • Gillisia lutea (isolates:1; rSTs:1)
          • Gillisia marina (isolates:1; rSTs:1)
          • Gillisia mitskevichiae (isolates:1; rSTs:1)
          • Gillisia sp. (isolates:5; rSTs:5 tree)
        • Gilvibacter (isolates:2; rSTs:2)
          • Gilvibacter sediminis (isolates:1; rSTs:1)
          • Gilvibacter sp. (isolates:1; rSTs:1)
        • Haloflavibacter (isolates:1; rSTs:1)
          • Haloflavibacter putidus (isolates:1; rSTs:1)
        • Halomarinibacterium (isolates:1; rSTs:1)
          • Halomarinibacterium sedimenti (isolates:1; rSTs:1)
        • Hanstruepera (isolates:5; rSTs:5 tree)
          • Hanstruepera flava (isolates:1; rSTs:1)
          • Hanstruepera marina (isolates:1; rSTs:1)
          • Hanstruepera neustonica (isolates:1; rSTs:1)
          • Hanstruepera ponticola (isolates:2; rSTs:2)
        • Hwangdonia (isolates:2; rSTs:1)
          • Hwangdonia lutea (isolates:1; rSTs:1)
          • Hwangdonia seohaensis (isolates:1)
        • Hyunsoonleella (isolates:8; rSTs:6 tree)
          • Hyunsoonleella aestuarii (isolates:2; rSTs:1)
          • Hyunsoonleella aquatilis (isolates:1; rSTs:1)
          • Hyunsoonleella flava (isolates:1; rSTs:1)
          • Hyunsoonleella jejuensis (isolates:1; rSTs:1)
          • Hyunsoonleella pacifica (isolates:2; rSTs:1)
          • Hyunsoonleella ulvae (isolates:1; rSTs:1)
        • Ichthyenterobacterium (isolates:1; rSTs:1)
          • Ichthyenterobacterium magnum (isolates:1; rSTs:1)
        • Imtechella (isolates:2; rSTs:1)
          • Imtechella halotolerans (isolates:2; rSTs:1)
        • Jejuia (isolates:4; rSTs:3 tree)
          • Jejuia pallidilutea (isolates:4; rSTs:3 tree)
        • Joostella (isolates:1; rSTs:1)
          • Joostella atrarenae (isolates:1; rSTs:1)
        • Kordia (isolates:7; rSTs:7 tree)
          • Kordia aestuariivivens (isolates:1; rSTs:1)
          • Kordia algicida (isolates:1; rSTs:1)
          • Kordia antarctica (isolates:1; rSTs:1)
          • Kordia jejudonensis (isolates:1; rSTs:1)
          • Kordia periserrulae (isolates:1; rSTs:1)
          • Kordia sp. (isolates:1; rSTs:1)
          • Kordia zhangzhouensis (isolates:1; rSTs:1)
        • Kriegella (isolates:1; rSTs:1)
          • Kriegella aquimaris (isolates:1; rSTs:1)
        • Lacinutrix (isolates:14; rSTs:14 tree)
          • Lacinutrix algicola (isolates:1; rSTs:1)
          • Lacinutrix himadriensis (isolates:1; rSTs:1)
          • Lacinutrix iliipiscaria (isolates:1; rSTs:1)
          • Lacinutrix jangbogonensis (isolates:1; rSTs:1)
          • Lacinutrix mariniflava (isolates:1; rSTs:1)
          • Lacinutrix neustonica (isolates:1; rSTs:1)
          • Lacinutrix sp. (isolates:6; rSTs:6 tree)
          • Lacinutrix venerupis (isolates:2; rSTs:2)
        • Leeuwenhoekiella (isolates:15; rSTs:13 tree)
          • Leeuwenhoekiella aequorea (isolates:1; rSTs:1)
          • Leeuwenhoekiella aestuarii (isolates:2; rSTs:2)
          • Leeuwenhoekiella blandensis (isolates:1; rSTs:1)
          • Leeuwenhoekiella marinoflava (isolates:2; rSTs:1)
          • Leeuwenhoekiella nanhaiensis (isolates:1; rSTs:1)
          • Leeuwenhoekiella palythoae (isolates:3; rSTs:2)
          • Leeuwenhoekiella parthenopeia (isolates:1; rSTs:1)
          • Leeuwenhoekiella polynyae (isolates:1; rSTs:1)
          • Leeuwenhoekiella sp. (isolates:3; rSTs:3 tree)
        • Lentiprolixibacter (isolates:1; rSTs:1)
          • Lentiprolixibacter aurantiacus (isolates:1; rSTs:1)
        • Leptobacterium (isolates:1; rSTs:1)
          • Leptobacterium flavescens (isolates:1; rSTs:1)
        • Litoribaculum (isolates:1; rSTs:1)
          • Litoribaculum gwangyangense (isolates:1; rSTs:1)
        • Luteirhabdus (isolates:1; rSTs:1)
          • Luteirhabdus pelagi (isolates:1; rSTs:1)
        • Lutibacter (isolates:15; rSTs:13 tree)
          • Lutibacter agarilyticus (isolates:1; rSTs:1)
          • Lutibacter citreus (isolates:1; rSTs:1)
          • Lutibacter flavus (isolates:1; rSTs:1)
          • Lutibacter litoralis (isolates:1; rSTs:1)
          • Lutibacter maritimus (isolates:1; rSTs:1)
          • Lutibacter oceani (isolates:2; rSTs:1)
          • Lutibacter oricola (isolates:1; rSTs:1)
          • Lutibacter profundi (isolates:1; rSTs:1)
          • Lutibacter sp. (isolates:6; rSTs:5 tree)
        • Lutimonas (isolates:4; rSTs:4 tree)
          • Lutimonas halocynthiae (isolates:1; rSTs:1)
          • Lutimonas saemankumensis (isolates:1; rSTs:1)
          • Lutimonas vermicola (isolates:1; rSTs:1)
          • Lutimonas zeaxanthinifaciens (isolates:1; rSTs:1)
        • Mangrovimonas (isolates:14; rSTs:12 tree)
          • Mangrovimonas cancribranchiae (isolates:2; rSTs:2)
          • Mangrovimonas futianensis (isolates:3; rSTs:2)
          • Mangrovimonas sp. (isolates:5; rSTs:5 tree)
          • Mangrovimonas spongiae (isolates:1; rSTs:1)
          • Mangrovimonas xylaniphaga (isolates:1; rSTs:1)
          • Mangrovimonas yunxiaonensis (isolates:2; rSTs:1)
        • Maribacter (isolates:62; rSTs:57 tree)
          • Maribacter aestuarii (isolates:1; rSTs:1)
          • Maribacter algarum (isolates:1; rSTs:1)
          • Maribacter algicola (isolates:1; rSTs:1)
          • Maribacter antarcticus (isolates:1; rSTs:1)
          • Maribacter aquimaris (isolates:1; rSTs:1)
          • Maribacter aquivivus (isolates:4; rSTs:4 tree)
          • Maribacter arcticus (isolates:1; rSTs:1)
          • Maribacter arenosus (isolates:1; rSTs:1)
          • Maribacter aurantiacus (isolates:1; rSTs:1)
          • Maribacter caenipelagi (isolates:1; rSTs:1)
          • Maribacter cobaltidurans (isolates:3; rSTs:2)
          • Maribacter dokdonensis (isolates:7; rSTs:7 tree)
          • Maribacter flavus (isolates:2; rSTs:2)
          • Maribacter forsetii (isolates:1; rSTs:1)
          • Maribacter halichondriae (isolates:1; rSTs:1)
          • Maribacter huludaoensis (isolates:1; rSTs:1)
          • Maribacter hydrothermalis (isolates:2; rSTs:1)
          • Maribacter litopenaei (isolates:1)
          • Maribacter litoralis (isolates:2; rSTs:2)
          • Maribacter luteus (isolates:2; rSTs:2)
          • Maribacter orientalis (isolates:1; rSTs:1)
          • Maribacter polysaccharolyticus (isolates:1; rSTs:1)
          • Maribacter polysiphoniae (isolates:2; rSTs:1)
          • Maribacter sedimenticola (isolates:1; rSTs:1)
          • Maribacter sp. (isolates:14; rSTs:13 tree)
          • Maribacter spongiicola (isolates:1; rSTs:1)
          • Maribacter stanieri (isolates:3; rSTs:3 tree)
          • Maribacter thermophilus (isolates:1; rSTs:1)
          • Maribacter ulvicola (isolates:1; rSTs:1)
          • Maribacter vaceletii (isolates:1; rSTs:1)
          • Maribacter zhoushanensis (isolates:1; rSTs:1)
        • Mariniflexile (isolates:8; rSTs:7 tree)
          • Mariniflexile fucanivorans (isolates:2; rSTs:1)
          • Mariniflexile gromovii (isolates:1; rSTs:1)
          • Mariniflexile litorale (isolates:1; rSTs:1)
          • Mariniflexile maritimum (isolates:1; rSTs:1)
          • Mariniflexile soesokkakense (isolates:1; rSTs:1)
          • Mariniflexile sp. (isolates:2; rSTs:2 tree)
        • Marinirhabdus (isolates:1; rSTs:1)
          • Marinirhabdus gelatinilytica (isolates:1; rSTs:1)
        • Marixanthomonas (isolates:3; rSTs:3 tree)
          • Marixanthomonas ophiurae (isolates:1; rSTs:1)
          • Marixanthomonas sp. (isolates:1; rSTs:1)
          • Marixanthomonas spongiae (isolates:1; rSTs:1)
        • Marixanthotalea (isolates:1; rSTs:1)
          • Marixanthotalea marina (isolates:1; rSTs:1)
        • Meridianimaribacter (isolates:2; rSTs:2)
          • Meridianimaribacter flavus (isolates:1; rSTs:1)
          • Meridianimaribacter sp. (isolates:1; rSTs:1)
        • Mesoflavibacter (isolates:10; rSTs:8 tree)
          • Mesoflavibacter profundi (isolates:2; rSTs:2)
          • Mesoflavibacter sp. (isolates:5; rSTs:4 tree)
          • Mesoflavibacter zeaxanthinifaciens (isolates:3; rSTs:2)
        • Mesohalobacter (isolates:1; rSTs:1)
          • Mesohalobacter halotolerans (isolates:1; rSTs:1)
        • Mesonia (isolates:14; rSTs:13 tree)
          • Mesonia aestuariivivens (isolates:1; rSTs:1)
          • Mesonia algae (isolates:1; rSTs:1)
          • Mesonia aquimarina (isolates:1; rSTs:1)
          • Mesonia hippocampi (isolates:1; rSTs:1)
          • Mesonia maritima (isolates:1; rSTs:1)
          • Mesonia mobilis (isolates:2; rSTs:1)
          • Mesonia oceanica (isolates:1; rSTs:1)
          • Mesonia ostreae (isolates:1; rSTs:1)
          • Mesonia phycicola (isolates:1; rSTs:1)
          • Mesonia profundi (isolates:1; rSTs:1)
          • Mesonia sp. (isolates:3; rSTs:3 tree)
        • Microcosmobacter (isolates:1; rSTs:1)
          • Microcosmobacter mediterraneus (isolates:1; rSTs:1)
        • Muriicola (isolates:4; rSTs:3 tree)
          • Muriicola jejuensis (isolates:2; rSTs:1)
          • Muriicola marianensis (isolates:1; rSTs:1)
          • Muriicola soli (isolates:1; rSTs:1)
        • Myroides (isolates:138; rSTs:86 tree)
          • Myroides albus (isolates:2; rSTs:1)
          • Myroides fluvii (isolates:1; rSTs:1)
          • Myroides guanonis (isolates:1; rSTs:1)
          • Myroides indicus (isolates:1; rSTs:1)
          • Myroides injenensis (isolates:2; rSTs:2)
          • Myroides marinus (isolates:21; rSTs:13 tree)
          • Myroides odoratimimus (isolates:78; rSTs:45 tree)
          • Myroides odoratus (isolates:10; rSTs:4 tree)
          • Myroides oncorhynchi (isolates:1; rSTs:1)
          • Myroides pelagicus (isolates:2; rSTs:2)
          • Myroides phaeus (isolates:3; rSTs:3 tree)
          • Myroides profundi (isolates:2; rSTs:1)
          • Myroides sp. (isolates:14; rSTs:11 tree)
        • Neptunitalea (isolates:2; rSTs:2)
          • Neptunitalea chrysea (isolates:1; rSTs:1)
          • Neptunitalea sp. (isolates:1; rSTs:1)
        • Nonlabens (isolates:28; rSTs:25 tree)
          • Nonlabens agnitus (isolates:1; rSTs:1)
          • Nonlabens antarcticus (isolates:1; rSTs:1)
          • Nonlabens arenilitoris (isolates:1; rSTs:1)
          • Nonlabens dokdonensis (isolates:2; rSTs:1)
          • Nonlabens marinus (isolates:1; rSTs:1)
          • Nonlabens ponticola (isolates:1; rSTs:1)
          • Nonlabens sp. (isolates:6; rSTs:6 tree)
          • Nonlabens spongiae (isolates:1; rSTs:1)
          • Nonlabens tegetincola (isolates:3; rSTs:3 tree)
          • Nonlabens ulvanivorans (isolates:8; rSTs:7 tree)
          • Nonlabens xiamenensis (isolates:1; rSTs:1)
          • Nonlabens xylanidelens (isolates:2; rSTs:1)
        • Oceanihabitans (isolates:2; rSTs:1)
          • Oceanihabitans sediminis (isolates:2; rSTs:1)
        • Ochrovirga (isolates:1; rSTs:1)
          • Ochrovirga pacifica (isolates:1; rSTs:1)
        • Olleya (isolates:19; rSTs:20 tree)
          • Olleya aquimaris (isolates:1; rSTs:1)
          • Olleya marilimosa (isolates:3; rSTs:3 tree)
          • Olleya namhaensis (isolates:4; rSTs:4 tree)
          • Olleya sediminilitoris (isolates:1; rSTs:1)
          • Olleya sp. (isolates:10; rSTs:11 tree)
        • Paenimyroides (isolates:7; rSTs:7 tree)
          • Paenimyroides aestuarii (isolates:1; rSTs:1)
          • Paenimyroides aquimaris (isolates:1; rSTs:1)
          • Paenimyroides baculatum (isolates:1; rSTs:1)
          • Paenimyroides ceti (isolates:1; rSTs:1)
          • Paenimyroides tangerinum (isolates:1; rSTs:1)
          • Paenimyroides ummariense (isolates:1; rSTs:1)
          • Paenimyroides viscosum (isolates:1; rSTs:1)
        • Pareuzebyella (isolates:2; rSTs:2)
          • Pareuzebyella sediminis (isolates:2; rSTs:2)
        • Patiriisocius (isolates:4; rSTs:4 tree)
          • Patiriisocius hiemis (isolates:1; rSTs:1)
          • Patiriisocius marinistellae (isolates:1; rSTs:1)
          • Patiriisocius marinus (isolates:2; rSTs:2)
        • Paucihalobacter (isolates:1; rSTs:1)
          • Paucihalobacter ruber (isolates:1; rSTs:1)
        • Pelagihabitans (isolates:1; rSTs:1)
          • Pelagihabitans pacificus (isolates:1; rSTs:1)
        • Planktosalinus (isolates:1; rSTs:1)
          • Planktosalinus lacus (isolates:1; rSTs:1)
        • Polaribacter (isolates:82; rSTs:59 tree)
          • Polaribacter aestuariivivens (isolates:1; rSTs:1)
          • Polaribacter aquimarinus (isolates:1; rSTs:1)
          • Polaribacter atrinae (isolates:3; rSTs:2)
          • Polaribacter batillariae (isolates:1; rSTs:1)
          • Polaribacter butkevichii (isolates:2; rSTs:1)
          • Polaribacter cellanae (isolates:1; rSTs:1)
          • Polaribacter dokdonensis (isolates:4; rSTs:1)
          • Polaribacter filamentus (isolates:1; rSTs:1)
          • Polaribacter gangjinensis (isolates:3; rSTs:1)
          • Polaribacter glomeratus (isolates:2; rSTs:1)
          • Polaribacter haliotis (isolates:3; rSTs:1)
          • Polaribacter huanghezhanensis (isolates:1; rSTs:1)
          • Polaribacter irgensii (isolates:1; rSTs:1)
          • Polaribacter litorisediminis (isolates:1; rSTs:1)
          • Polaribacter marinaquae (isolates:1; rSTs:1)
          • Polaribacter marinus (isolates:1; rSTs:1)
          • Polaribacter pacificus (isolates:2; rSTs:1)
          • Polaribacter pectinis (isolates:1; rSTs:1)
          • Polaribacter porphyrae (isolates:2; rSTs:1)
          • Polaribacter reichenbachii (isolates:5; rSTs:1)
          • Polaribacter sejongensis (isolates:2; rSTs:1)
          • Polaribacter septentrionalilitoris (isolates:1; rSTs:1)
          • Polaribacter sp. (isolates:33; rSTs:32 tree)
          • Polaribacter staleyi (isolates:1; rSTs:1)
          • Polaribacter tangerinus (isolates:2; rSTs:1)
          • Polaribacter undariae (isolates:2; rSTs:1)
          • Polaribacter vadi (isolates:4; rSTs:1)
        • Pontimicrobium (isolates:2; rSTs:2)
          • Pontimicrobium aquaticum (isolates:1; rSTs:1)
          • Pontimicrobium sp. (isolates:1; rSTs:1)
        • Poritiphilus (isolates:1; rSTs:1)
          • Poritiphilus flavus (isolates:1; rSTs:1)
        • Postechiella (isolates:1; rSTs:1)
          • Postechiella marina (isolates:1; rSTs:1)
        • Pricia (isolates:2; rSTs:2)
          • Pricia antarctica (isolates:1; rSTs:1)
          • Pricia mediterranea (isolates:1; rSTs:1)
        • Pseudalgibacter (isolates:1; rSTs:1)
          • Pseudalgibacter alginicilyticus (isolates:1; rSTs:1)
        • Pseudotenacibaculum (isolates:1; rSTs:1)
          • Pseudotenacibaculum sp. (isolates:1; rSTs:1)
        • Pseudozobellia (isolates:1; rSTs:1)
          • Pseudozobellia thermophila (isolates:1; rSTs:1)
        • Psychroflexus (isolates:21; rSTs:20 tree)
          • Psychroflexus aestuariivivens (isolates:1; rSTs:1)
          • Psychroflexus aurantiacus (isolates:1; rSTs:1)
          • Psychroflexus curvus (isolates:2; rSTs:2)
          • Psychroflexus gondwanensis (isolates:2; rSTs:2)
          • Psychroflexus halocasei (isolates:1; rSTs:1)
          • Psychroflexus lacisalsi (isolates:2; rSTs:1)
          • Psychroflexus longus (isolates:1; rSTs:1)
          • Psychroflexus maritimus (isolates:1; rSTs:1)
          • Psychroflexus montanilacus (isolates:1; rSTs:1)
          • Psychroflexus planctonicus (isolates:1; rSTs:1)
          • Psychroflexus salarius (isolates:1; rSTs:1)
          • Psychroflexus salis (isolates:1; rSTs:1)
          • Psychroflexus sediminis (isolates:1; rSTs:1)
          • Psychroflexus sp. (isolates:3; rSTs:3 tree)
          • Psychroflexus torquis (isolates:1; rSTs:1)
          • Psychroflexus tropicus (isolates:1; rSTs:1)
        • Psychroserpens (isolates:13; rSTs:13 tree)
          • Psychroserpens algicola (isolates:2; rSTs:2)
          • Psychroserpens burtonensis (isolates:2; rSTs:2)
          • Psychroserpens damuponensis (isolates:1; rSTs:1)
          • Psychroserpens jangbogonensis (isolates:1; rSTs:1)
          • Psychroserpens luteolus (isolates:1; rSTs:1)
          • Psychroserpens luteus (isolates:1; rSTs:1)
          • Psychroserpens mesophilus (isolates:1; rSTs:1)
          • Psychroserpens ponticola (isolates:1; rSTs:1)
          • Psychroserpens sp. (isolates:3; rSTs:3 tree)
        • Pukyongia (isolates:1; rSTs:1)
          • Pukyongia salina (isolates:1; rSTs:1)
        • Pustulibacterium (isolates:1; rSTs:1)
          • Pustulibacterium marinum (isolates:1; rSTs:1)
        • Rasiella (isolates:1; rSTs:1)
          • Rasiella rasia (isolates:1; rSTs:1)
        • Robertkochia (isolates:5; rSTs:4 tree)
          • Robertkochia marina (isolates:3; rSTs:2)
          • Robertkochia sediminum (isolates:1; rSTs:1)
          • Robertkochia solimangrovi (isolates:1; rSTs:1)
        • Robiginitalea (isolates:8; rSTs:7 tree)
          • Robiginitalea aestuariiviva (isolates:1; rSTs:1)
          • Robiginitalea biformata (isolates:1; rSTs:1)
          • Robiginitalea marina (isolates:1; rSTs:1)
          • Robiginitalea myxolifaciens (isolates:1; rSTs:1)
          • Robiginitalea sediminis (isolates:1; rSTs:1)
          • Robiginitalea sp. (isolates:3; rSTs:2 tree)
        • Salegentibacter (isolates:27; rSTs:20 tree)
          • Salegentibacter agarivorans (isolates:1; rSTs:1)
          • Salegentibacter echinorum (isolates:1; rSTs:1)
          • Salegentibacter flavus (isolates:1; rSTs:1)
          • Salegentibacter holothuriorum (isolates:1; rSTs:1)
          • Salegentibacter lacus (isolates:1; rSTs:1)
          • Salegentibacter maritimus (isolates:2; rSTs:2)
          • Salegentibacter mishustinae (isolates:6; rSTs:3 tree)
          • Salegentibacter salarius (isolates:3; rSTs:1)
          • Salegentibacter salegens (isolates:2; rSTs:1)
          • Salegentibacter salinarum (isolates:2; rSTs:1)
          • Salegentibacter sediminis (isolates:1; rSTs:1)
          • Salegentibacter sp. (isolates:5; rSTs:5 tree)
          • Salegentibacter tibetensis (isolates:1; rSTs:1)
        • Salinimicrobium (isolates:14; rSTs:14 tree)
          • Salinimicrobium catena (isolates:3; rSTs:2)
          • Salinimicrobium marinum (isolates:1; rSTs:1)
          • Salinimicrobium oceani (isolates:1; rSTs:1)
          • Salinimicrobium profundisediminis (isolates:1; rSTs:1)
          • Salinimicrobium sediminilitoris (isolates:1; rSTs:1)
          • Salinimicrobium sediminis (isolates:1; rSTs:1)
          • Salinimicrobium sp. (isolates:3; rSTs:4 tree)
          • Salinimicrobium terrae (isolates:1; rSTs:1)
          • Salinimicrobium tongyeongense (isolates:1; rSTs:1)
          • Salinimicrobium xinjiangense (isolates:1; rSTs:1)
        • Saonia (isolates:1; rSTs:1)
          • Saonia flava (isolates:1; rSTs:1)
        • Sediminibacter (isolates:1; rSTs:1)
          • Sediminibacter sp. (isolates:1; rSTs:1)
        • Sediminicola (isolates:4; rSTs:4 tree)
          • Sediminicola arcticus (isolates:1; rSTs:1)
          • Sediminicola luteus (isolates:1; rSTs:1)
          • Sediminicola sp. (isolates:2; rSTs:2)
        • Seonamhaeicola (isolates:7; rSTs:7 tree)
          • Seonamhaeicola algicola (isolates:1; rSTs:1)
          • Seonamhaeicola aphaedonensis (isolates:1; rSTs:1)
          • Seonamhaeicola marinus (isolates:1; rSTs:1)
          • Seonamhaeicola maritimus (isolates:2; rSTs:2)
          • Seonamhaeicola sediminis (isolates:1; rSTs:1)
          • Seonamhaeicola sp. (isolates:1; rSTs:1)
        • Siansivirga (isolates:1; rSTs:1)
          • Siansivirga zeaxanthinifaciens (isolates:1; rSTs:1)
        • Sinomicrobium (isolates:7; rSTs:6 tree)
          • Sinomicrobium kalidii (isolates:1; rSTs:1)
          • Sinomicrobium oceani (isolates:2; rSTs:2)
          • Sinomicrobium pectinilyticum (isolates:1; rSTs:1)
          • Sinomicrobium sp. (isolates:1; rSTs:1)
          • Sinomicrobium weinanense (isolates:2; rSTs:1)
        • Snuella (isolates:2; rSTs:2)
          • Snuella lapsa (isolates:1; rSTs:1)
          • Snuella sedimenti (isolates:1; rSTs:1)
        • Spongiivirga (isolates:1; rSTs:1)
          • Spongiivirga citrea (isolates:1; rSTs:1)
        • Subsaxibacter (isolates:1; rSTs:1)
          • Subsaxibacter sp. (isolates:1; rSTs:1)
        • Subsaximicrobium (isolates:3; rSTs:1)
          • Subsaximicrobium wynnwilliamsii (isolates:3; rSTs:1)
        • Tamlana (isolates:15; rSTs:13 tree)
          • Tamlana agarivorans (isolates:1; rSTs:1)
          • Tamlana carrageenivorans (isolates:1; rSTs:1)
          • Tamlana crocina (isolates:1; rSTs:1)
          • Tamlana fucoidanivorans (isolates:1; rSTs:1)
          • Tamlana haliotis (isolates:1; rSTs:1)
          • Tamlana laminarinivorans (isolates:1; rSTs:1)
          • Tamlana nanhaiensis (isolates:1; rSTs:1)
          • Tamlana sargassicola (isolates:1; rSTs:1)
          • Tamlana sedimentorum (isolates:1; rSTs:1)
          • Tamlana sp. (isolates:6; rSTs:4 tree)
        • Tenacibaculum (isolates:279; rSTs:161 tree)
          • Tenacibaculum adriaticum (isolates:1; rSTs:1)
          • Tenacibaculum agarivorans (isolates:1; rSTs:1)
          • Tenacibaculum aiptasiae (isolates:3; rSTs:2)
          • Tenacibaculum aquimarinum (isolates:2; rSTs:2)
          • Tenacibaculum bernardetii (isolates:1; rSTs:1)
          • Tenacibaculum caenipelagi (isolates:1; rSTs:1)
          • Tenacibaculum dicentrarchi (isolates:25; rSTs:18 tree)
          • Tenacibaculum discolor (isolates:4; rSTs:3 tree)
          • Tenacibaculum finnmarkense (isolates:124; rSTs:42 tree)
          • Tenacibaculum gallaicum (isolates:1; rSTs:1)
          • Tenacibaculum haliotis (isolates:1; rSTs:1)
          • Tenacibaculum holothuriorum (isolates:1; rSTs:1)
          • Tenacibaculum jejuense (isolates:1; rSTs:1)
          • Tenacibaculum larymnensis (isolates:1; rSTs:1)
          • Tenacibaculum lutimaris (isolates:1; rSTs:1)
          • Tenacibaculum maritimum (isolates:39; rSTs:26 tree)
          • Tenacibaculum mesophilum (isolates:7; rSTs:5 tree)
          • Tenacibaculum ovolyticum (isolates:3; rSTs:3 tree)
          • Tenacibaculum pacificus (isolates:1; rSTs:1)
          • Tenacibaculum pelagium (isolates:1; rSTs:1)
          • Tenacibaculum piscium (isolates:17; rSTs:11 tree)
          • Tenacibaculum retecalamus (isolates:1; rSTs:1)
          • Tenacibaculum singaporense (isolates:2; rSTs:2)
          • Tenacibaculum skagerrakense (isolates:1; rSTs:1)
          • Tenacibaculum soleae (isolates:4; rSTs:4 tree)
          • Tenacibaculum sp. (isolates:33; rSTs:27 tree)
          • Tenacibaculum tangerinum (isolates:1; rSTs:1)
          • Tenacibaculum todarodis (isolates:1; rSTs:1)
        • Ulvibacter (isolates:4; rSTs:3 tree)
          • Candidatus Ulvibacter alkanivorans (isolates:1; rSTs:1)
          • Ulvibacter antarcticus (isolates:1; rSTs:1)
          • Ulvibacter litoralis (isolates:2; rSTs:1)
        • Ulvibacterium (isolates:2; rSTs:2)
          • Ulvibacterium marinum (isolates:2; rSTs:2)
        • Urechidicola (isolates:2; rSTs:2)
          • Urechidicola croceus (isolates:1; rSTs:1)
          • Urechidicola vernalis (isolates:1; rSTs:1)
        • Vaginella (isolates:1; rSTs:1)
          • Vaginella massiliensis (isolates:1; rSTs:1)
        • Wenyingzhuangia (isolates:7; rSTs:6 tree)
          • Wenyingzhuangia aestuarii (isolates:1; rSTs:1)
          • Wenyingzhuangia fucanilytica (isolates:1; rSTs:1)
          • Wenyingzhuangia gilva (isolates:1; rSTs:1)
          • Wenyingzhuangia heitensis (isolates:1; rSTs:1)
          • Wenyingzhuangia marina (isolates:2; rSTs:1)
          • Wenyingzhuangia sp. (isolates:1; rSTs:1)
        • Winogradskyella (isolates:63; rSTs:55 tree)
          • Winogradskyella alexanderae (isolates:1; rSTs:1)
          • Winogradskyella algicola (isolates:1; rSTs:1)
          • Winogradskyella aquimaris (isolates:1; rSTs:1)
          • Winogradskyella arenosi (isolates:1; rSTs:1)
          • Winogradskyella aurantia (isolates:1; rSTs:1)
          • Winogradskyella aurantiaca (isolates:1; rSTs:1)
          • Winogradskyella bathintestinalis (isolates:1; rSTs:1)
          • Winogradskyella costae (isolates:1; rSTs:1)
          • Winogradskyella damuponensis (isolates:1; rSTs:1)
          • Winogradskyella echinorum (isolates:2; rSTs:1)
          • Winogradskyella eckloniae (isolates:1; rSTs:1)
          • Winogradskyella endarachnes (isolates:1; rSTs:1)
          • Winogradskyella epiphytica (isolates:2; rSTs:1)
          • Winogradskyella eximia (isolates:2; rSTs:2)
          • Winogradskyella flava (isolates:2; rSTs:2)
          • Winogradskyella forsetii (isolates:4; rSTs:2)
          • Winogradskyella haliclonae (isolates:1; rSTs:1)
          • Winogradskyella helgolandensis (isolates:2; rSTs:2)
          • Winogradskyella immobilis (isolates:2; rSTs:1)
          • Winogradskyella jejuensis (isolates:1; rSTs:1)
          • Winogradskyella litoriviva (isolates:1; rSTs:1)
          • Winogradskyella ludwigii (isolates:1; rSTs:1)
          • Winogradskyella luteola (isolates:1; rSTs:1)
          • Winogradskyella marina (isolates:1; rSTs:1)
          • Winogradskyella marincola (isolates:1; rSTs:1)
          • Winogradskyella ouciana (isolates:1; rSTs:1)
          • Winogradskyella pacifica (isolates:2; rSTs:2)
          • Winogradskyella poriferorum (isolates:1; rSTs:1)
          • Winogradskyella psychrotolerans (isolates:1; rSTs:1)
          • Winogradskyella schleiferi (isolates:1; rSTs:1)
          • Winogradskyella sediminis (isolates:2; rSTs:2)
          • Winogradskyella sp. (isolates:11; rSTs:8 tree)
          • Winogradskyella tangerina (isolates:1; rSTs:1)
          • Winogradskyella thalassocola (isolates:1; rSTs:1)
          • Winogradskyella undariae (isolates:3; rSTs:3 tree)
          • Winogradskyella ursingii (isolates:1; rSTs:1)
          • Winogradskyella vidalii (isolates:1; rSTs:1)
          • Winogradskyella vincentii (isolates:1; rSTs:1)
          • Winogradskyella wandonensis (isolates:1; rSTs:1)
          • Winogradskyella wichelsiae (isolates:1; rSTs:1)
        • Wocania (isolates:2; rSTs:2)
          • Wocania arenilitoris (isolates:1; rSTs:1)
          • Wocania ichthyoenteri (isolates:1; rSTs:1)
        • Xanthomarina (isolates:2; rSTs:2)
          • Xanthomarina gelatinilytica (isolates:1; rSTs:1)
          • Xanthomarina spongicola (isolates:1; rSTs:1)
        • Yeosuana (isolates:2; rSTs:2)
          • Yeosuana aromativorans (isolates:1; rSTs:1)
          • Yeosuana marina (isolates:1; rSTs:1)
        • Zeaxanthinibacter (isolates:2; rSTs:2)
          • Zeaxanthinibacter enoshimensis (isolates:1; rSTs:1)
          • Zeaxanthinibacter sp. (isolates:1; rSTs:1)
        • Zhouia (isolates:4; rSTs:4 tree)
          • Zhouia amylolytica (isolates:3; rSTs:3 tree)
          • Zhouia spongiae (isolates:1; rSTs:1)
        • Zobellia (isolates:18; rSTs:19 tree)
          • Zobellia alginiliquefaciens (isolates:1; rSTs:1)
          • Zobellia amurskyensis (isolates:1; rSTs:1)
          • Zobellia barbeyronii (isolates:1; rSTs:1)
          • Zobellia galactanivorans (isolates:3; rSTs:3 tree)
          • Zobellia laminariae (isolates:2; rSTs:2)
          • Zobellia nedashkovskayae (isolates:2; rSTs:2)
          • Zobellia roscoffensis (isolates:2; rSTs:2)
          • Zobellia russellii (isolates:1; rSTs:1)
          • Zobellia sp. (isolates:3; rSTs:4 tree)
          • Zobellia uliginosa (isolates:2; rSTs:2)
        • Zunongwangia (isolates:9; rSTs:9 tree)
          • Zunongwangia atlantica (isolates:1; rSTs:1)
          • Zunongwangia endophytica (isolates:1; rSTs:1)
          • Zunongwangia mangrovi (isolates:1; rSTs:1)
          • Zunongwangia pacifica (isolates:1; rSTs:1)
          • Zunongwangia profunda (isolates:2; rSTs:2)
          • Zunongwangia sp. (isolates:3; rSTs:3 tree)
      • Ichthyobacteriaceae (isolates:1; rSTs:1)
        • Ichthyobacterium (isolates:1; rSTs:1)
          • Ichthyobacterium seriolicida (isolates:1; rSTs:1)
      • Luteibaculaceae (isolates:1; rSTs:1)
        • Luteibaculum (isolates:1; rSTs:1)
          • Luteibaculum oceani (isolates:1; rSTs:1)
      • Owenweeksiaceae (isolates:2; rSTs:2)
        • Croceimicrobium (isolates:1; rSTs:1)
          • Croceimicrobium hydrocarbonivorans (isolates:1; rSTs:1)
        • Owenweeksia (isolates:1; rSTs:1)
          • Owenweeksia hongkongensis (isolates:1; rSTs:1)
      • Parvicellaceae (isolates:1; rSTs:1)
        • Parvicella (isolates:1; rSTs:1)
          • Parvicella tangerina (isolates:1; rSTs:1)
      • Phaeocystidibacteraceae (isolates:3; rSTs:2)
        • Phaeocystidibacter (isolates:3; rSTs:2)
          • Phaeocystidibacter luteus (isolates:1; rSTs:1)
          • Phaeocystidibacter marisrubri (isolates:2; rSTs:1)
      • Salibacteraceae (isolates:1; rSTs:1)
        • Salibacter (isolates:1; rSTs:1)
          • Salibacter halophilus (isolates:1; rSTs:1)
      • Sanyastnellaceae (isolates:1; rSTs:1)
        • Sanyastnella (isolates:1; rSTs:1)
          • Sanyastnella coralliicola (isolates:1; rSTs:1)
      • Schleiferiaceae (isolates:4; rSTs:3 tree)
        • Schleiferia (isolates:3; rSTs:2)
          • Schleiferia thermophila (isolates:3; rSTs:2)
        • Thermaurantimonas (isolates:1; rSTs:1)
          • Thermaurantimonas aggregans (isolates:1; rSTs:1)
      • Vicingaceae (isolates:1; rSTs:1)
        • Vicingus (isolates:1; rSTs:1)
          • Vicingus serpentipes (isolates:1; rSTs:1)
      • Weeksellaceae (isolates:1516; rSTs:760 tree)
        • Algoriella (isolates:2; rSTs:2)
          • Algoriella xinjiangensis (isolates:2; rSTs:2)
        • Apibacter (isolates:26; rSTs:17 tree)
          • Apibacter adventoris (isolates:2; rSTs:2)
          • Apibacter mensalis (isolates:1; rSTs:1)
          • Apibacter muscae (isolates:3; rSTs:3 tree)
          • Apibacter raozihei (isolates:1; rSTs:1)
          • Apibacter sp. (isolates:19; rSTs:10 tree)
        • Bergeyella (isolates:13; rSTs:6 tree)
          • Bergeyella cardium (isolates:4; rSTs:2)
          • Bergeyella zoohelcum (isolates:9; rSTs:4 tree)
        • Chishuiella (isolates:2; rSTs:1)
          • Chishuiella changwenlii (isolates:2; rSTs:1)
        • Chryseobacterium (isolates:418; rSTs:328 tree)
          • Candidatus Chryseobacterium massiliae (isolates:1; rSTs:1)
          • Chryseobacterium aahli (isolates:1; rSTs:1)
          • Chryseobacterium angstadtii (isolates:1; rSTs:1)
          • Chryseobacterium antibioticum (isolates:1; rSTs:1)
          • Chryseobacterium aquaticum (isolates:3; rSTs:3 tree)
          • Chryseobacterium aquifrigidense (isolates:1; rSTs:1)
          • Chryseobacterium arachidis (isolates:1; rSTs:1)
          • Chryseobacterium arthrosphaerae (isolates:11; rSTs:8 tree)
          • Chryseobacterium artocarpi (isolates:1; rSTs:1)
          • Chryseobacterium aurantiacum (isolates:1; rSTs:1)
          • Chryseobacterium aureum (isolates:1; rSTs:1)
          • Chryseobacterium balustinum (isolates:3; rSTs:1)
          • Chryseobacterium bernardetii (isolates:3; rSTs:3 tree)
          • Chryseobacterium binzhouense (isolates:1; rSTs:1)
          • Chryseobacterium camelliae (isolates:2; rSTs:2)
          • Chryseobacterium candidae (isolates:1; rSTs:1)
          • Chryseobacterium capnotolerans (isolates:1; rSTs:1)
          • Chryseobacterium carnipullorum (isolates:4; rSTs:2)
          • Chryseobacterium caseinilyticum (isolates:1; rSTs:1)
          • Chryseobacterium cheonjiense (isolates:1; rSTs:1)
          • Chryseobacterium contaminans (isolates:3; rSTs:2)
          • Chryseobacterium cucumeris (isolates:6; rSTs:6 tree)
          • Chryseobacterium culicis (isolates:2; rSTs:2)
          • Chryseobacterium daecheongense (isolates:3; rSTs:2)
          • Chryseobacterium daeguense (isolates:1; rSTs:1)
          • Chryseobacterium defluvii (isolates:1; rSTs:1)
          • Chryseobacterium echinoideorum (isolates:1; rSTs:1)
          • Chryseobacterium edaphi (isolates:1; rSTs:1)
          • Chryseobacterium elymi (isolates:1; rSTs:1)
          • Chryseobacterium endalhagicum (isolates:1; rSTs:1)
          • Chryseobacterium fistulae (isolates:1; rSTs:1)
          • Chryseobacterium flavum (isolates:2; rSTs:1)
          • Chryseobacterium fluminis (isolates:1; rSTs:1)
          • Chryseobacterium foetidum (isolates:1; rSTs:1)
          • Chryseobacterium formosense (isolates:2; rSTs:1)
          • Chryseobacterium formosus (isolates:1; rSTs:1)
          • Chryseobacterium gallinarum (isolates:3; rSTs:3 tree)
          • Chryseobacterium gambrini (isolates:4; rSTs:4 tree)
          • Chryseobacterium geocarposphaerae (isolates:1; rSTs:1)
          • Chryseobacterium gilvum (isolates:1; rSTs:1)
          • Chryseobacterium ginsengisoli (isolates:1; rSTs:1)
          • Chryseobacterium ginsenosidimutans (isolates:2; rSTs:2)
          • Chryseobacterium glaciei (isolates:1; rSTs:1)
          • Chryseobacterium gleum (isolates:6; rSTs:4 tree)
          • Chryseobacterium gotjawalense (isolates:1; rSTs:1)
          • Chryseobacterium gregarium (isolates:1; rSTs:1)
          • Chryseobacterium gwangjuense (isolates:1; rSTs:1)
          • Chryseobacterium hagamense (isolates:1; rSTs:1)
          • Chryseobacterium hispalense (isolates:1; rSTs:1)
          • Chryseobacterium indicum (isolates:1; rSTs:1)
          • Chryseobacterium indologenes (isolates:56; rSTs:17 tree)
          • Chryseobacterium indoltheticum (isolates:6; rSTs:4 tree)
          • Chryseobacterium jejuense (isolates:3; rSTs:2)
          • Chryseobacterium joostei (isolates:2; rSTs:1)
          • Chryseobacterium kimseyorum (isolates:1; rSTs:1)
          • Chryseobacterium koreense (isolates:2; rSTs:1)
          • Chryseobacterium kwangjuense (isolates:1; rSTs:1)
          • Chryseobacterium lactis (isolates:3; rSTs:2)
          • Chryseobacterium lacus (isolates:3; rSTs:2)
          • Chryseobacterium lathyri (isolates:3; rSTs:2)
          • Chryseobacterium limigenitum (isolates:2; rSTs:1)
          • Chryseobacterium luquanense (isolates:1; rSTs:1)
          • Chryseobacterium luteum (isolates:1; rSTs:1)
          • Chryseobacterium manosquense (isolates:1; rSTs:1)
          • Chryseobacterium metallicongregator (isolates:1; rSTs:1)
          • Chryseobacterium mucoviscidosis (isolates:1; rSTs:1)
          • Chryseobacterium muglaense (isolates:3; rSTs:1)
          • Chryseobacterium mulctrae (isolates:1; rSTs:1)
          • Chryseobacterium nakagawai (isolates:2; rSTs:1)
          • Chryseobacterium nematophagum (isolates:1; rSTs:1)
          • Chryseobacterium nepalense (isolates:2; rSTs:2)
          • Chryseobacterium oleae (isolates:1; rSTs:1)
          • Chryseobacterium oncorhynchi (isolates:1; rSTs:1)
          • Chryseobacterium oranimense (isolates:5; rSTs:4 tree)
          • Chryseobacterium oryctis (isolates:1; rSTs:1)
          • Chryseobacterium oryzae (isolates:1; rSTs:1)
          • Chryseobacterium paludis (isolates:1; rSTs:1)
          • Chryseobacterium panacisoli (isolates:1; rSTs:1)
          • Chryseobacterium paridis (isolates:1; rSTs:1)
          • Chryseobacterium pennae (isolates:1; rSTs:1)
          • Chryseobacterium pennipullorum (isolates:1; rSTs:1)
          • Chryseobacterium phocaeense (isolates:1; rSTs:1)
          • Chryseobacterium phosphatilyticum (isolates:1; rSTs:1)
          • Chryseobacterium piperi (isolates:2; rSTs:1)
          • Chryseobacterium piscicola (isolates:2; rSTs:1)
          • Chryseobacterium piscium (isolates:1; rSTs:1)
          • Chryseobacterium polytrichastri (isolates:1; rSTs:1)
          • Chryseobacterium populi (isolates:1; rSTs:1)
          • Chryseobacterium potabilaquae (isolates:2; rSTs:2)
          • Chryseobacterium profundimaris (isolates:1; rSTs:1)
          • Chryseobacterium pyrolae (isolates:1; rSTs:1)
          • Chryseobacterium rhizoplanae (isolates:1; rSTs:1)
          • Chryseobacterium rhizosphaerae (isolates:6; rSTs:5 tree)
          • Chryseobacterium salivictor (isolates:1; rSTs:1)
          • Chryseobacterium schmidteae (isolates:1; rSTs:1)
          • Chryseobacterium scophthalmum (isolates:4; rSTs:4 tree)
          • Chryseobacterium sediminis (isolates:2; rSTs:2)
          • Chryseobacterium shandongense (isolates:3; rSTs:3 tree)
          • Chryseobacterium shigense (isolates:2; rSTs:1)
          • Chryseobacterium soldanellicola (isolates:1; rSTs:1)
          • Chryseobacterium soli (isolates:2; rSTs:2)
          • Chryseobacterium sp. (isolates:156; rSTs:136 tree)
          • Chryseobacterium suipulveris (isolates:1; rSTs:1)
          • Chryseobacterium taeanense (isolates:1; rSTs:1)
          • Chryseobacterium tagetis (isolates:1; rSTs:1)
          • Chryseobacterium taichungense (isolates:1; rSTs:1)
          • Chryseobacterium taihuense (isolates:2; rSTs:2)
          • Chryseobacterium taiwanense (isolates:1; rSTs:1)
          • Chryseobacterium takakiae (isolates:1; rSTs:1)
          • Chryseobacterium taklimakanense (isolates:4; rSTs:4 tree)
          • Chryseobacterium tructae (isolates:1)
          • Chryseobacterium turcicum (isolates:1; rSTs:1)
          • Chryseobacterium ureilyticum (isolates:1; rSTs:1)
          • Chryseobacterium urinae (isolates:1; rSTs:1)
          • Chryseobacterium vaccae (isolates:1; rSTs:1)
          • Chryseobacterium viscerum (isolates:2; rSTs:2)
          • Chryseobacterium vrystaatense (isolates:2; rSTs:2)
          • Chryseobacterium wanjuense (isolates:1; rSTs:1)
          • Planobacterium oryzisoli (isolates:1; rSTs:1)
        • Cloacibacterium (isolates:7; rSTs:6 tree)
          • Cloacibacterium caeni (isolates:1; rSTs:1)
          • Cloacibacterium normanense (isolates:4; rSTs:2)
          • Cloacibacterium rupense (isolates:1; rSTs:1)
          • Cloacibacterium sp. (isolates:1; rSTs:2)
        • Cruoricaptor (isolates:2; rSTs:2)
          • Cruoricaptor ignavus (isolates:2; rSTs:2)
        • Elizabethkingia (isolates:646; rSTs:191 tree)
          • Elizabethkingia anophelis (isolates:490; rSTs:136 tree)
          • Elizabethkingia argenteiflava (isolates:1; rSTs:1)
          • Elizabethkingia bruuniana (isolates:9; rSTs:5 tree)
          • Elizabethkingia meningoseptica (isolates:92; rSTs:22 tree)
          • Elizabethkingia miricola (isolates:29; rSTs:10 tree)
          • Elizabethkingia occulta (isolates:2; rSTs:2)
          • Elizabethkingia sp. (isolates:15; rSTs:8 tree)
          • Elizabethkingia ursingii (isolates:8; rSTs:7 tree)
        • Empedobacter (isolates:35; rSTs:29 tree)
          • Empedobacter brevis (isolates:5; rSTs:4 tree)
          • Empedobacter falsenii (isolates:13; rSTs:10 tree)
          • Empedobacter sedimenti (isolates:1; rSTs:1)
          • Empedobacter sp. (isolates:9; rSTs:8 tree)
          • Empedobacter stercoris (isolates:6; rSTs:5 tree)
          • Empedobacter tilapiae (isolates:1; rSTs:1)
        • Epilithonimonas (isolates:22; rSTs:19 tree)
          • Epilithonimonas arachidiradicis (isolates:2; rSTs:1)
          • Epilithonimonas bovis (isolates:1; rSTs:1)
          • Epilithonimonas caeni (isolates:1; rSTs:1)
          • Epilithonimonas ginsengisoli (isolates:1; rSTs:1)
          • Epilithonimonas hispanica (isolates:1; rSTs:1)
          • Epilithonimonas hominis (isolates:2; rSTs:2)
          • Epilithonimonas hungarica (isolates:2; rSTs:2)
          • Epilithonimonas lactis (isolates:2; rSTs:1)
          • Epilithonimonas mollis (isolates:1; rSTs:1)
          • Epilithonimonas pallida (isolates:1; rSTs:1)
          • Epilithonimonas sp. (isolates:2; rSTs:1)
          • Epilithonimonas tenax (isolates:1; rSTs:1)
          • Epilithonimonas vandammei (isolates:2; rSTs:2)
          • Epilithonimonas xixisoli (isolates:1; rSTs:1)
          • Epilithonimonas zeae (isolates:2; rSTs:2)
        • Faecalibacter (isolates:4; rSTs:4 tree)
          • Faecalibacter bovis (isolates:1; rSTs:1)
          • Faecalibacter macacae (isolates:1; rSTs:1)
          • Faecalibacter rhinopitheci (isolates:1; rSTs:1)
          • Faecalibacter sp. (isolates:1; rSTs:1)
        • Frigoriflavimonas (isolates:1; rSTs:1)
          • Frigoriflavimonas asaccharolytica (isolates:1; rSTs:1)
        • Halpernia (isolates:2; rSTs:2)
          • Halpernia frigidisoli (isolates:1; rSTs:1)
          • Halpernia humi (isolates:1; rSTs:1)
        • Kaistella (isolates:30; rSTs:24 tree)
          • Kaistella antarctica (isolates:3; rSTs:1)
          • Kaistella carnis (isolates:1; rSTs:1)
          • Kaistella chaponensis (isolates:1; rSTs:1)
          • Kaistella daneshvariae (isolates:2; rSTs:2)
          • Kaistella faecalis (isolates:2; rSTs:1)
          • Kaistella flava (ex Peng et al. 2021) (isolates:1; rSTs:1)
          • Kaistella gelatinilytica (isolates:1; rSTs:1)
          • Kaistella haifensis (isolates:2; rSTs:2)
          • Kaistella jeonii (isolates:3; rSTs:2)
          • Kaistella montana (isolates:1; rSTs:1)
          • Kaistella palustris (isolates:1; rSTs:1)
          • Kaistella polysaccharea (isolates:1; rSTs:1)
          • Kaistella pullorum (isolates:1; rSTs:1)
          • Kaistella rhinocerotis (isolates:1; rSTs:1)
          • Kaistella soli (isolates:1; rSTs:1)
          • Kaistella solincola (isolates:1; rSTs:1)
          • Kaistella sp. (isolates:4; rSTs:2 tree)
          • Kaistella treverensis (isolates:1; rSTs:1)
          • Kaistella yananensis (isolates:1; rSTs:1)
          • Kaistella yonginensis (isolates:1; rSTs:1)
        • Marnyiella (isolates:3; rSTs:2)
          • Marnyiella aurantia (isolates:3; rSTs:2)
        • Moheibacter (isolates:3; rSTs:3 tree)
          • Moheibacter lacus (isolates:1; rSTs:1)
          • Moheibacter sediminis (isolates:1; rSTs:1)
          • Moheibacter stercoris (isolates:1; rSTs:1)
        • Ornithobacterium (isolates:16; rSTs:12 tree)
          • Candidatus Ornithobacterium hominis (isolates:3; rSTs:3 tree)
          • Ornithobacterium rhinotracheale (isolates:13; rSTs:9 tree)
        • Profundicola (isolates:2; rSTs:2)
          • Profundicola chukchiensis (isolates:2; rSTs:2)
        • Riemerella (isolates:274; rSTs:102 tree)
          • Riemerella anatipestifer (isolates:272; rSTs:100 tree)
          • Riemerella columbina (isolates:1; rSTs:1)
          • Riemerella columbipharyngis (isolates:1; rSTs:1)
        • Soonwooa (isolates:1; rSTs:1)
          • Soonwooa buanensis (isolates:1; rSTs:1)
        • Weeksella (isolates:7; rSTs:6 tree)
          • Weeksella massiliensis (isolates:1; rSTs:1)
          • Weeksella sp. (isolates:1; rSTs:1)
          • Weeksella virosa (isolates:5; rSTs:4 tree)
  • Saprospiria (isolates:68; rSTs:36 tree)
    • Saprospirales (isolates:68; rSTs:36 tree)
      • Haliscomenobacteraceae (isolates:6; rSTs:5 tree)
        • Haliscomenobacter (isolates:1; rSTs:1)
          • Haliscomenobacter hydrossis (isolates:1; rSTs:1)
        • Phaeodactylibacter (isolates:2; rSTs:2)
          • Phaeodactylibacter luteus (isolates:1; rSTs:1)
          • Phaeodactylibacter xiamenensis (isolates:1; rSTs:1)
        • Portibacter (isolates:3; rSTs:2)
          • Portibacter lacus (isolates:2; rSTs:1)
          • Portibacter marinus (isolates:1; rSTs:1)
      • Lewinellaceae (isolates:15; rSTs:13 tree)
        • Flavilitoribacter (isolates:1; rSTs:1)
          • Flavilitoribacter nigricans (isolates:1; rSTs:1)
        • Lewinella (isolates:2; rSTs:2 tree)
          • Lewinella cohaerens (isolates:1; rSTs:1)
          • Lewinella sp. (isolates:1; rSTs:1 tree)
        • Neolewinella (isolates:12; rSTs:10 tree)
          • Neolewinella agarilytica (isolates:1; rSTs:1)
          • Neolewinella antarctica (isolates:1; rSTs:1)
          • Neolewinella aquimaris (isolates:1; rSTs:1)
          • Neolewinella aurantiaca (isolates:1; rSTs:1)
          • Neolewinella lacunae (isolates:2; rSTs:1)
          • Neolewinella litorea (isolates:1; rSTs:1)
          • Neolewinella marina (isolates:2; rSTs:1)
          • Neolewinella maritima (isolates:1; rSTs:1)
          • Neolewinella persica (isolates:1; rSTs:1)
          • Neolewinella xylanilytica (isolates:1; rSTs:1)
      • Saprospiraceae (isolates:47; rSTs:18 tree)
        • Aureispira (isolates:3; rSTs:3 tree)
          • Aureispira anguillae (isolates:1; rSTs:1)
          • Aureispira sp. (isolates:2; rSTs:2 tree)
        • Candidatus Brachybacter (isolates:11)
          • Candidatus Brachybacter algidus (isolates:11)
        • Candidatus Defluviibacterium (isolates:5)
          • Candidatus Defluviibacterium haderslevense (isolates:5)
        • Candidatus Opimibacter (isolates:3)
          • Candidatus Opimibacter iunctus (isolates:1)
          • Candidatus Opimibacter skivensis (isolates:2)
        • Candidatus Parvibacillus (isolates:8)
          • Candidatus Parvibacillus calidus (isolates:8)
        • Candidatus Vicinibacter (isolates:11; rSTs:9 tree)
          • Candidatus Vicinibacter affinis (isolates:10; rSTs:8 tree)
          • Candidatus Vicinibacter proximus (isolates:1; rSTs:1)
        • Membranihabitans (isolates:2; rSTs:2 tree)
          • Membranihabitans marinus (isolates:1; rSTs:1)
          • Membranihabitans maritimus (isolates:1; rSTs:1)
        • Saprospira (isolates:4; rSTs:4 tree)
          • Saprospira grandis (isolates:3; rSTs:3 tree)
          • Saprospira sp. (isolates:1; rSTs:1)
  • Sphingobacteriia (isolates:509; rSTs:446 tree)
    • Sphingobacteriales (isolates:509; rSTs:446 tree)
      • Aurantibacillaceae (isolates:1; rSTs:1)
        • Aurantibacillus (isolates:1; rSTs:1)
          • Aurantibacillus circumpalustris (isolates:1; rSTs:1)
      • Sphingobacteriaceae (isolates:508; rSTs:445 tree)
        • Albibacterium (isolates:1; rSTs:1)
          • Albibacterium bauzanense (isolates:1; rSTs:1)
        • Anseongella (isolates:2)
          • Anseongella ginsenosidimutans (isolates:2)
        • Arcticibacter (isolates:6; rSTs:5 tree)
          • Arcticibacter eurypsychrophilus (isolates:1; rSTs:1)
          • Arcticibacter pallidicorallinus (isolates:1; rSTs:1)
          • Arcticibacter svalbardensis (isolates:1; rSTs:1)
          • Arcticibacter tournemirensis (isolates:3; rSTs:2)
        • Daejeonella (isolates:5; rSTs:5 tree)
          • Daejeonella lutea (isolates:1; rSTs:1)
          • Daejeonella oryzae (isolates:1; rSTs:1)
          • Daejeonella rubra (isolates:1; rSTs:1)
          • Daejeonella sp. (isolates:2; rSTs:2)
        • Desertivirga (isolates:3; rSTs:3 tree)
          • Desertivirga arenae (isolates:1; rSTs:1)
          • Desertivirga brevis (isolates:1; rSTs:1)
          • Desertivirga xinjiangensis (isolates:1; rSTs:1)
        • Hufsiella (isolates:2; rSTs:2)
          • Hufsiella arboris (isolates:1; rSTs:1)
          • Hufsiella ginkgonis (isolates:1; rSTs:1)
        • Mucilaginibacter (isolates:119; rSTs:107 tree)
          • Mucilaginibacter achroorhodeus (isolates:1; rSTs:1)
          • Mucilaginibacter agri (isolates:1; rSTs:1)
          • Mucilaginibacter aquaedulcis (isolates:1; rSTs:1)
          • Mucilaginibacter aquariorum (isolates:1; rSTs:1)
          • Mucilaginibacter aquatilis (isolates:1; rSTs:1)
          • Mucilaginibacter arboris (isolates:1; rSTs:1)
          • Mucilaginibacter auburnensis (isolates:1; rSTs:1)
          • Mucilaginibacter aurantiaciroseus (isolates:1; rSTs:1)
          • Mucilaginibacter boryungensis (isolates:1; rSTs:1)
          • Mucilaginibacter celer (isolates:1; rSTs:1)
          • Mucilaginibacter conchicola (isolates:1; rSTs:1)
          • Mucilaginibacter corticis (isolates:1; rSTs:1)
          • Mucilaginibacter daejeonensis (isolates:1; rSTs:1)
          • Mucilaginibacter defluvii (isolates:1; rSTs:1)
          • Mucilaginibacter dorajii (isolates:2; rSTs:1)
          • Mucilaginibacter endophyticus (isolates:1; rSTs:1)
          • Mucilaginibacter flavidus (isolates:1; rSTs:1)
          • Mucilaginibacter flavus (isolates:1; rSTs:1)
          • Mucilaginibacter frigoritolerans (isolates:1; rSTs:1)
          • Mucilaginibacter galii (isolates:1; rSTs:1)
          • Mucilaginibacter gilvus (isolates:1; rSTs:1)
          • Mucilaginibacter ginkgonis (isolates:1; rSTs:1)
          • Mucilaginibacter ginsenosidivorans (isolates:1; rSTs:1)
          • Mucilaginibacter ginsenosidivorax (isolates:1; rSTs:1)
          • Mucilaginibacter glaciei (isolates:1; rSTs:1)
          • Mucilaginibacter gossypii (isolates:3; rSTs:3 tree)
          • Mucilaginibacter gossypiicola (isolates:1; rSTs:1)
          • Mucilaginibacter gotjawali (isolates:2; rSTs:1)
          • Mucilaginibacter gracilis (isolates:1; rSTs:1)
          • Mucilaginibacter gynuensis (isolates:1; rSTs:1)
          • Mucilaginibacter hurinus (isolates:1; rSTs:1)
          • Mucilaginibacter inviolabilis (isolates:1; rSTs:1)
          • Mucilaginibacter jinjuensis (isolates:1; rSTs:1)
          • Mucilaginibacter kameinonensis (isolates:1; rSTs:1)
          • Mucilaginibacter lacusdianchii (isolates:1; rSTs:1)
          • Mucilaginibacter lappiensis (isolates:3; rSTs:2)
          • Mucilaginibacter limnophilus (isolates:1; rSTs:1)
          • Mucilaginibacter mali (isolates:1; rSTs:1)
          • Mucilaginibacter mallensis (isolates:1; rSTs:1)
          • Mucilaginibacter myungsuensis (isolates:2; rSTs:1)
          • Mucilaginibacter oryzae (isolates:1; rSTs:1)
          • Mucilaginibacter pallidiroseus (isolates:1; rSTs:1)
          • Mucilaginibacter paludis (isolates:1; rSTs:1)
          • Mucilaginibacter panaciglaebae (isolates:1; rSTs:1)
          • Mucilaginibacter pankratovii (isolates:1; rSTs:1)
          • Mucilaginibacter pedocola (isolates:1; rSTs:1)
          • Mucilaginibacter phenanthrenivorans (isolates:1; rSTs:1)
          • Mucilaginibacter phyllosphaerae (isolates:3; rSTs:1)
          • Mucilaginibacter pineti (isolates:1; rSTs:1)
          • Mucilaginibacter pocheonensis (isolates:1; rSTs:1)
          • Mucilaginibacter polytrichastri (isolates:2; rSTs:1)
          • Mucilaginibacter psychrotolerans (isolates:1; rSTs:1)
          • Mucilaginibacter rigui (isolates:1; rSTs:1)
          • Mucilaginibacter rivuli (isolates:1; rSTs:1)
          • Mucilaginibacter robiniae (isolates:1; rSTs:1)
          • Mucilaginibacter roseus (isolates:1; rSTs:1)
          • Mucilaginibacter rubeus (isolates:3; rSTs:3 tree)
          • Mucilaginibacter sabulilitoris (isolates:1; rSTs:1)
          • Mucilaginibacter segetis (isolates:1; rSTs:1)
          • Mucilaginibacter sp. (isolates:42; rSTs:37 tree)
          • Mucilaginibacter straminoryzae (isolates:1; rSTs:1)
          • Mucilaginibacter terrae (isolates:1; rSTs:1)
          • Mucilaginibacter terrenus (isolates:1; rSTs:1)
          • Mucilaginibacter terrigena (isolates:1; rSTs:1)
          • Mucilaginibacter xinganensis (isolates:1; rSTs:1)
          • Mucilaginibacter yixingensis (isolates:1; rSTs:1)
        • Nubsella (isolates:1; rSTs:1)
          • Nubsella zeaxanthinifaciens (isolates:1; rSTs:1)
        • Olivibacter (isolates:8; rSTs:9 tree)
          • Olivibacter domesticus (isolates:1; rSTs:1)
          • Olivibacter ginsenosidimutans (isolates:1; rSTs:1)
          • Olivibacter jilunii (isolates:1; rSTs:1)
          • Olivibacter sitiensis (isolates:1; rSTs:1)
          • Olivibacter sp. (isolates:4; rSTs:5 tree)
        • Paradesertivirga (isolates:1; rSTs:1)
          • Paradesertivirga mongoliensis (isolates:1; rSTs:1)
        • Parapedobacter (isolates:13; rSTs:11 tree)
          • Parapedobacter composti (isolates:1; rSTs:1)
          • Parapedobacter defluvii (isolates:1; rSTs:1)
          • Parapedobacter indicus (isolates:2; rSTs:1)
          • Parapedobacter koreensis (isolates:1; rSTs:1)
          • Parapedobacter luteus (isolates:1; rSTs:1)
          • Parapedobacter lycopersici (isolates:1; rSTs:1)
          • Parapedobacter pyrenivorans (isolates:1; rSTs:1)
          • Parapedobacter soli (isolates:1; rSTs:1)
          • Parapedobacter sp. (isolates:2; rSTs:2)
          • Parapedobacter tibetensis (isolates:2; rSTs:1)
        • Pararcticibacter (isolates:1; rSTs:1)
          • Pararcticibacter amylolyticus (isolates:1; rSTs:1)
        • Pedobacter (isolates:177; rSTs:161 tree)
          • Pedobacter africanus (isolates:2; rSTs:2)
          • Pedobacter agri (isolates:4; rSTs:3 tree)
          • Pedobacter albus (isolates:1; rSTs:1)
          • Pedobacter alluvionis (isolates:2; rSTs:2)
          • Pedobacter antarcticus (isolates:3; rSTs:2)
          • Pedobacter aquae (isolates:1; rSTs:1)
          • Pedobacter aquatilis (isolates:1; rSTs:1)
          • Pedobacter arcticus (isolates:1; rSTs:1)
          • Pedobacter borealis (isolates:1; rSTs:1)
          • Pedobacter boryungensis (isolates:1; rSTs:1)
          • Pedobacter caeni (isolates:1; rSTs:1)
          • Pedobacter changchengzhani (isolates:1; rSTs:1)
          • Pedobacter chinensis (isolates:1; rSTs:1)
          • Pedobacter chitinilyticus (isolates:2; rSTs:1)
          • Pedobacter cryoconitis (isolates:6; rSTs:6 tree)
          • Pedobacter cryophilus (isolates:1; rSTs:1)
          • Pedobacter cryotolerans (isolates:1; rSTs:1)
          • Pedobacter duraquae (isolates:1; rSTs:1)
          • Pedobacter endophyticus (isolates:1; rSTs:1)
          • Pedobacter faecalis (isolates:1; rSTs:1)
          • Pedobacter fastidiosus (isolates:1; rSTs:1)
          • Pedobacter flavus (isolates:1; rSTs:1)
          • Pedobacter foliorum (isolates:1; rSTs:1)
          • Pedobacter frigidisoli (isolates:1; rSTs:1)
          • Pedobacter frigiditerrae (isolates:1; rSTs:1)
          • Pedobacter frigoris (isolates:1; rSTs:1)
          • Pedobacter gandavensis (isolates:1; rSTs:1)
          • Pedobacter ghigonis (isolates:1; rSTs:1)
          • Pedobacter ginsengisoli (isolates:1; rSTs:1)
          • Pedobacter ginsengiterrae (isolates:1; rSTs:1)
          • Pedobacter ginsenosidimutans (isolates:1; rSTs:1)
          • Pedobacter glucosidilyticus (isolates:1; rSTs:1)
          • Pedobacter hartonius (isolates:1; rSTs:1)
          • Pedobacter helvus (isolates:1; rSTs:1)
          • Pedobacter heparinus (isolates:2; rSTs:1)
          • Pedobacter hiemivivus (isolates:2; rSTs:2)
          • Pedobacter indicus (isolates:1; rSTs:1)
          • Pedobacter insulae (isolates:1; rSTs:1)
          • Pedobacter jejuensis (isolates:1; rSTs:1)
          • Pedobacter jeongneungensis (isolates:1; rSTs:1)
          • Pedobacter kyonggii (isolates:1; rSTs:1)
          • Pedobacter kyungheensis (isolates:1; rSTs:1)
          • Pedobacter lusitanus (isolates:2; rSTs:2)
          • Pedobacter mendelii (isolates:1; rSTs:1)
          • Pedobacter metabolipauper (isolates:1; rSTs:1)
          • Pedobacter miscanthi (isolates:1; rSTs:1)
          • Pedobacter montanisoli (isolates:1; rSTs:1)
          • Pedobacter mucosus (isolates:1; rSTs:1)
          • Pedobacter namyangjuensis (isolates:1; rSTs:1)
          • Pedobacter nanyangensis (isolates:1; rSTs:1)
          • Pedobacter nototheniae (isolates:1; rSTs:1)
          • Pedobacter nutrimenti (isolates:1; rSTs:1)
          • Pedobacter nyackensis (isolates:1; rSTs:1)
          • Pedobacter paludis (isolates:1; rSTs:1)
          • Pedobacter panaciterrae (isolates:3; rSTs:3 tree)
          • Pedobacter petrophilus (isolates:1; rSTs:1)
          • Pedobacter planticolens (isolates:1; rSTs:1)
          • Pedobacter polaris (isolates:1; rSTs:1)
          • Pedobacter polysacchareus (isolates:1; rSTs:1)
          • Pedobacter psychrodurus (isolates:1; rSTs:1)
          • Pedobacter psychrophilus (isolates:1; rSTs:1)
          • Pedobacter psychroterrae (isolates:1; rSTs:1)
          • Pedobacter psychrotolerans (isolates:2; rSTs:1)
          • Pedobacter punctiformis (isolates:1; rSTs:1)
          • Pedobacter puniceum (isolates:1; rSTs:1)
          • Pedobacter quisquiliarum (isolates:1; rSTs:1)
          • Pedobacter rhizosphaerae (isolates:1; rSTs:1)
          • Pedobacter rhodius (isolates:1; rSTs:1)
          • Pedobacter riviphilus (isolates:1; rSTs:1)
          • Pedobacter roseus (isolates:1; rSTs:1)
          • Pedobacter sandarakinus (isolates:1; rSTs:1)
          • Pedobacter schmidteae (isolates:1; rSTs:1)
          • Pedobacter segetis (isolates:1; rSTs:1)
          • Pedobacter soli (isolates:1; rSTs:1)
          • Pedobacter sp. (isolates:70; rSTs:62 tree)
          • Pedobacter steynii (isolates:2; rSTs:1)
          • Pedobacter suwonensis (isolates:2; rSTs:2)
          • Pedobacter terrae (isolates:2; rSTs:2)
          • Pedobacter ureilyticus (isolates:1; rSTs:1)
          • Pedobacter westerhofensis (isolates:1; rSTs:1)
          • Pedobacter xixiisoli (isolates:2; rSTs:1)
          • Pedobacter yonginense (isolates:1; rSTs:1)
          • Pedobacter yulinensis (isolates:1; rSTs:1)
          • Pedobacter zeae (isolates:2; rSTs:1)
        • Pelobium (isolates:1; rSTs:1)
          • Pelobium manganitolerans (isolates:1; rSTs:1)
        • Pseudopedobacter (isolates:1; rSTs:1)
          • Pseudopedobacter saltans (isolates:1; rSTs:1)
        • Rhinopithecimicrobium (isolates:1; rSTs:1)
          • Rhinopithecimicrobium faecis (isolates:1; rSTs:1)
        • Solitalea (isolates:5; rSTs:5 tree)
          • Solitalea agri (isolates:1; rSTs:1)
          • Solitalea canadensis (isolates:1; rSTs:1)
          • Solitalea koreensis (isolates:1; rSTs:1)
          • Solitalea lacus (isolates:1; rSTs:1)
          • Solitalea longa (isolates:1; rSTs:1)
        • Sphingobacterium (isolates:161; rSTs:130 tree)
          • Sphingobacterium alimentarium (isolates:1; rSTs:1)
          • Sphingobacterium alkalisoli (isolates:2; rSTs:1)
          • Sphingobacterium allocomposti (isolates:1; rSTs:1)
          • Sphingobacterium arenae (isolates:1; rSTs:1)
          • Sphingobacterium athyrii (isolates:1; rSTs:1)
          • Sphingobacterium bambusae (isolates:1; rSTs:1)
          • Sphingobacterium bovisgrunnientis (isolates:1; rSTs:1)
          • Sphingobacterium bovistauri (isolates:1; rSTs:1)
          • Sphingobacterium cavernae (isolates:1; rSTs:1)
          • Sphingobacterium cellulitidis (isolates:1; rSTs:1)
          • Sphingobacterium chungjuense (isolates:1; rSTs:1)
          • Sphingobacterium chuzhouense (isolates:1; rSTs:1)
          • Sphingobacterium cladoniae (isolates:1; rSTs:1)
          • Sphingobacterium composti (isolates:1; rSTs:1)
          • Sphingobacterium corticibacter (isolates:1; rSTs:1)
          • Sphingobacterium corticibacterium (isolates:1; rSTs:1)
          • Sphingobacterium daejeonense (isolates:2; rSTs:1)
          • Sphingobacterium deserti (isolates:1; rSTs:1)
          • Sphingobacterium detergens (isolates:1; rSTs:1)
          • Sphingobacterium endophyticum (isolates:1; rSTs:1)
          • Sphingobacterium faecium (isolates:9; rSTs:7 tree)
          • Sphingobacterium ginsenosidimutans (isolates:1; rSTs:1)
          • Sphingobacterium gobiense (isolates:1; rSTs:1)
          • Sphingobacterium griseoflavum (isolates:1; rSTs:1)
          • Sphingobacterium haloxyli (isolates:1; rSTs:1)
          • Sphingobacterium hotanense (isolates:3; rSTs:3 tree)
          • Sphingobacterium humi (isolates:1; rSTs:1)
          • Sphingobacterium hungaricum (isolates:1; rSTs:1)
          • Sphingobacterium kitahiroshimense (isolates:3; rSTs:3 tree)
          • Sphingobacterium kyonggiense (isolates:1; rSTs:1)
          • Sphingobacterium lactis (isolates:2; rSTs:1)
          • Sphingobacterium litopenaei (isolates:1; rSTs:1)
          • Sphingobacterium lumbrici (isolates:1; rSTs:1)
          • Sphingobacterium micropteri (isolates:1; rSTs:1)
          • Sphingobacterium mizutaii (isolates:6; rSTs:3 tree)
          • Sphingobacterium multivorum (isolates:11; rSTs:6 tree)
          • Sphingobacterium nematocida (isolates:1; rSTs:1)
          • Sphingobacterium olei (isolates:1; rSTs:1)
          • Sphingobacterium oryzagri (isolates:1; rSTs:1)
          • Sphingobacterium paludis (isolates:1; rSTs:1)
          • Sphingobacterium paramultivorum (isolates:3; rSTs:2)
          • Sphingobacterium paucimobilis (isolates:1; rSTs:1)
          • Sphingobacterium pedocola (isolates:1; rSTs:1)
          • Sphingobacterium phlebotomi (isolates:1; rSTs:1)
          • Sphingobacterium prati (isolates:1; rSTs:1)
          • Sphingobacterium psychroaquaticum (isolates:2; rSTs:2)
          • Sphingobacterium puteale (isolates:1; rSTs:1)
          • Sphingobacterium rhinopitheci (isolates:1; rSTs:1)
          • Sphingobacterium shayense (isolates:1; rSTs:1)
          • Sphingobacterium siyangense (isolates:2; rSTs:2 tree)
          • Sphingobacterium soli (isolates:2; rSTs:1)
          • Sphingobacterium sp. (isolates:56; rSTs:46 tree)
          • Sphingobacterium spiritivorum (isolates:9; rSTs:5 tree)
          • Sphingobacterium tabacisoli (isolates:1; rSTs:1)
          • Sphingobacterium tenebrionis (isolates:1)
          • Sphingobacterium thalpophilum (isolates:4; rSTs:3 tree)
          • Sphingobacterium thermophilum (isolates:1; rSTs:1)
          • Sphingobacterium wenxiniae (isolates:1; rSTs:1)
          • Sphingobacterium yanglingense (isolates:1; rSTs:1)
          • Sphingobacterium zeae (isolates:1; rSTs:1)
• Balneolota (isolates:25; rSTs:23 tree)
  • Balneolia (isolates:25; rSTs:23 tree)
    • Balneolales (isolates:25; rSTs:23 tree)
      • Balneolaceae (isolates:22; rSTs:21 tree)
        • Balneola (isolates:1; rSTs:1)
          • Balneola vulgaris (isolates:1; rSTs:1)
        • Fodinibius (isolates:10; rSTs:9 tree)
          • Aliifodinibius salipaludis (isolates:1; rSTs:1)
          • Fodinibius halophilus (isolates:1; rSTs:1)
          • Fodinibius roseus (isolates:1; rSTs:1)
          • Fodinibius salicampi (isolates:2; rSTs:1)
          • Fodinibius salinus (isolates:1; rSTs:1)
          • Fodinibius saliphilus (isolates:1; rSTs:1)
          • Fodinibius salsisoli (isolates:1; rSTs:1)
          • Fodinibius sediminis (isolates:1; rSTs:1)
          • Fodinibius sp. (isolates:1; rSTs:1)
        • Gracilimonas (isolates:5; rSTs:5 tree)
          • Gracilimonas amylolytica (isolates:1; rSTs:1)
          • Gracilimonas mengyeensis (isolates:1; rSTs:1)
          • Gracilimonas sediminicola (isolates:1; rSTs:1)
          • Gracilimonas sp. (isolates:1; rSTs:1)
          • Gracilimonas tropica (isolates:1; rSTs:1)
        • Halalkalibaculum (isolates:1; rSTs:1)
          • Halalkalibaculum roseum (isolates:1; rSTs:1)
        • Rhodohalobacter (isolates:5; rSTs:5 tree)
          • Rhodohalobacter barkolensis (isolates:1; rSTs:1)
          • Rhodohalobacter halophilus (isolates:1; rSTs:1)
          • Rhodohalobacter mucosus (isolates:1; rSTs:1)
          • Rhodohalobacter sp. (isolates:1; rSTs:1)
          • Rhodohalobacter sulfatireducens (isolates:1; rSTs:1)
      • Cyclonatronaceae (isolates:3; rSTs:2)
        • Cyclonatronum (isolates:2; rSTs:2)
          • Cyclonatronum proteinivorum (isolates:1; rSTs:1)
          • Cyclonatronum sp. (isolates:1; rSTs:1)
        • Natronogracilivirga (isolates:1)
          • Natronogracilivirga saccharolytica (isolates:1)
• Bdellovibrionota (isolates:50; rSTs:38 tree)
  • Bacteriovoracia (isolates:12; rSTs:9 tree)
    • Bacteriovoracales (isolates:12; rSTs:9 tree)
      • Bacteriovoracaceae (isolates:5; rSTs:3 tree)
        • Bacteriovorax (isolates:4; rSTs:3 tree)
          • Bacteriovorax sp. (isolates:1; rSTs:1)
          • Bacteriovorax stolpii (isolates:3; rSTs:2)
        • Peredibacter (isolates:1)
          • Peredibacter starrii (isolates:1)
      • Halobacteriovoraceae (isolates:7; rSTs:6 tree)
        • Halobacteriovorax (isolates:7; rSTs:6 tree)
          • Halobacteriovorax marinus (isolates:2; rSTs:2)
          • Halobacteriovorax sp. (isolates:4; rSTs:3 tree)
          • Halobacteriovorax vibrionivorans (isolates:1; rSTs:1)
  • Bdellovibrionia (isolates:27; rSTs:23 tree)
    • Bdellovibrionales (isolates:27; rSTs:23 tree)
      • Pseudobdellovibrionaceae (isolates:27; rSTs:23 tree)
        • Bdellovibrio (isolates:24; rSTs:20 tree)
          • Bdellovibrio bacteriovorus (isolates:14; rSTs:7 tree)
          • Bdellovibrio reynosensis (isolates:1; rSTs:1)
          • Bdellovibrio sp. (isolates:8; rSTs:11 tree)
          • Bdellovibrio svalbardensis (isolates:1; rSTs:1)
        • Micavibrio (isolates:2; rSTs:2)
          • Micavibrio aeruginosavorus (isolates:2; rSTs:2)
        • Pseudobdellovibrio (isolates:1; rSTs:1)
          • Pseudobdellovibrio exovorus (isolates:1; rSTs:1)
  • Oligoflexia (isolates:11; rSTs:6 tree)
    • Oligoflexales (isolates:3; rSTs:2)
      • Oligoflexaceae (isolates:1; rSTs:1)
        • Oligoflexus (isolates:1; rSTs:1)
          • Oligoflexus tunisiensis (isolates:1; rSTs:1)
      • Pseudobacteriovoracaceae (isolates:2; rSTs:1)
        • Pseudobacteriovorax (isolates:2; rSTs:1)
          • Pseudobacteriovorax antillogorgiicola (isolates:2; rSTs:1)
    • Silvanigrellales (isolates:8; rSTs:4 tree)
      • Silvanigrellaceae (isolates:7; rSTs:4 tree)
        • Fluviispira (isolates:3; rSTs:2)
          • Fluviispira multicolorata (isolates:1; rSTs:1)
          • Fluviispira sanaruensis (isolates:1; rSTs:1)
          • Fluviispira vulneris (isolates:1)
        • Pigmentibacter (isolates:2; rSTs:1)
          • Pigmentibacter ruber (isolates:1; rSTs:1)
          • Pigmentibacter sp. (isolates:1)
        • Silvanigrella (isolates:2; rSTs:1)
          • Silvanigrella aquatica (isolates:1)
          • Silvanigrella paludirubra (isolates:1; rSTs:1)
• Caldisericota (isolates:1; rSTs:1)
  • Caldisericia (isolates:1; rSTs:1)
    • Caldisericales (isolates:1; rSTs:1)
      • Caldisericaceae (isolates:1; rSTs:1)
        • Caldisericum (isolates:1; rSTs:1)
          • Caldisericum exile (isolates:1; rSTs:1)
• Calditrichota (isolates:2; rSTs:1)
  • Calditrichia (isolates:2; rSTs:1)
    • Calditrichales (isolates:2; rSTs:1)
      • Calditrichaceae (isolates:2; rSTs:1)
        • Caldithrix (isolates:2; rSTs:1)
          • Caldithrix abyssi (isolates:2; rSTs:1)
• Campylobacterota (isolates:107079; rSTs:29149)
  • Desulfurellia (isolates:6; rSTs:6 tree)
    • Desulfurellales (isolates:6; rSTs:6 tree)
      • Desulfurellaceae (isolates:2; rSTs:2 tree)
        • Desulfurella (isolates:2; rSTs:2)
          • Desulfurella amilsii (isolates:1; rSTs:1)
          • Desulfurella multipotens (isolates:1; rSTs:1)
      • Hippeaceae (isolates:4; rSTs:4 tree)
        • Hippea (isolates:4; rSTs:4 tree)
          • Hippea alviniae (isolates:1; rSTs:1)
          • Hippea jasoniae (isolates:1; rSTs:1)
          • Hippea maritima (isolates:1; rSTs:1)
          • Hippea sp. (isolates:1; rSTs:1)
  • Epsilonproteobacteria (isolates:107073; rSTs:29143)
    • Campylobacterales (isolates:107049; rSTs:29125)
      • Arcobacteraceae (isolates:460; rSTs:363 tree)
        • Aliarcobacter (isolates:393; rSTs:317 tree)
          • Aliarcobacter butzleri (isolates:255; rSTs:202 tree)
          • Aliarcobacter cibarius (isolates:7; rSTs:4 tree)
          • Aliarcobacter cryaerophilus (isolates:72; rSTs:70 tree)
          • Aliarcobacter faecis (isolates:3; rSTs:1)
          • Aliarcobacter lanthieri (isolates:6; rSTs:3 tree)
          • Aliarcobacter skirrowii (isolates:35; rSTs:28 tree)
          • Aliarcobacter thereius (isolates:9; rSTs:6 tree)
          • Aliarcobacter trophiarum (isolates:4; rSTs:2)
          • Aliarcobacter vitoriensis (isolates:2; rSTs:1)
        • Arcobacter (isolates:33; rSTs:21 tree)
          • Arcobacter acticola (isolates:1; rSTs:1)
          • Arcobacter aquimarinus (isolates:2; rSTs:1)
          • Arcobacter arenosus (isolates:1; rSTs:1)
          • Arcobacter caeni (isolates:1; rSTs:1)
          • Arcobacter cloacae (isolates:3; rSTs:2)
          • Arcobacter defluvii (isolates:2; rSTs:1)
          • Arcobacter ellisii (isolates:1; rSTs:1)
          • Arcobacter lacus (isolates:3; rSTs:3 tree)
          • Arcobacter nitrofigilis (isolates:3; rSTs:1)
          • Arcobacter porcinus (isolates:6; rSTs:5 tree)
          • Arcobacter sp. (isolates:4; rSTs:1)
          • Arcobacter suis (isolates:2; rSTs:1)
          • Arcobacter vandammei (isolates:2; rSTs:1)
          • Arcobacter venerupis (isolates:2; rSTs:1)
        • Candidatus Marinarcus (isolates:1; rSTs:1)
          • Candidatus Marinarcus aquaticus (isolates:1; rSTs:1)
        • Halarcobacter (isolates:10; rSTs:8 tree)
          • Halarcobacter anaerophilus (isolates:3; rSTs:2)
          • Halarcobacter bivalviorum (isolates:3; rSTs:2)
          • Halarcobacter ebronensis (isolates:3; rSTs:3 tree)
          • Halarcobacter mediterraneus (isolates:1; rSTs:1)
        • Malaciobacter (isolates:15; rSTs:9 tree)
          • Malaciobacter canalis (isolates:2; rSTs:1)
          • Malaciobacter halophilus (isolates:2; rSTs:1)
          • Malaciobacter marinus (isolates:3; rSTs:2)
          • Malaciobacter molluscorum (isolates:3; rSTs:2)
          • Malaciobacter mytili (isolates:3; rSTs:2)
          • Malaciobacter pacificus (isolates:2; rSTs:1)
        • Poseidonibacter (isolates:8; rSTs:7 tree)
          • Poseidonibacter antarcticus (isolates:1; rSTs:1)
          • Poseidonibacter lekithochrous (isolates:2; rSTs:2)
          • Poseidonibacter ostreae (isolates:3; rSTs:2)
          • Poseidonibacter parvus (isolates:1; rSTs:1)
          • Poseidonibacter sp. (isolates:1; rSTs:1)
      • Campylobacteraceae (isolates:102703; rSTs:25068)
        • Campylobacter (isolates:102703; rSTs:25068)
          • Campylobacter anatolicus (isolates:3; rSTs:3 tree)
          • Campylobacter armoricus (isolates:11; rSTs:6 tree)
          • Campylobacter aviculae (isolates:1; rSTs:1)
          • Campylobacter avium (isolates:3; rSTs:1)
          • Campylobacter bilis (isolates:6; rSTs:1)
          • Campylobacter blaseri (isolates:3; rSTs:1)
          • Campylobacter canadensis (isolates:8; rSTs:3 tree)
          • Campylobacter coli (isolates:27417; rSTs:8943)
          • Campylobacter concisus (isolates:289; rSTs:202 tree)
          • Campylobacter corcagiensis (isolates:4; rSTs:1)
          • Campylobacter cuniculorum (isolates:3; rSTs:1)
          • Campylobacter curvus (isolates:19; rSTs:13 tree)
          • Campylobacter devanensis (isolates:35; rSTs:45 tree)
          • Campylobacter estrildidarum (isolates:1; rSTs:1)
          • Campylobacter felis (isolates:6; rSTs:6 tree)
          • Campylobacter fetus (isolates:567; rSTs:142 tree)
          • Campylobacter gastrosuis (isolates:1; rSTs:1)
          • Campylobacter geochelonis (isolates:4; rSTs:4 tree)
          • Campylobacter gracilis (isolates:4; rSTs:1)
          • Campylobacter helveticus (isolates:29; rSTs:24 tree)
          • Campylobacter hepaticus (isolates:55; rSTs:21 tree)
          • Campylobacter hominis (isolates:4; rSTs:1)
          • Campylobacter hyointestinalis (isolates:86; rSTs:64 tree)
          • Campylobacter iguaniorum (isolates:3; rSTs:3 tree)
          • Campylobacter insulaenigrae (isolates:19; rSTs:16 tree)
          • Campylobacter jejuni (isolates:71280; rSTs:14107)
          • Campylobacter lanienae (isolates:35; rSTs:31 tree)
          • Campylobacter lari (isolates:709; rSTs:406 tree)
          • Campylobacter magnus (isolates:5; rSTs:5 tree)
          • Campylobacter majalis (isolates:1; rSTs:1)
          • Campylobacter massiliensis (isolates:1; rSTs:1)
          • Campylobacter mucosalis (isolates:8; rSTs:6 tree)
          • Campylobacter novaezeelandiae (isolates:5; rSTs:8 tree)
          • Campylobacter ornithocola (isolates:2; rSTs:1)
          • Campylobacter peloridis (isolates:6; rSTs:4 tree)
          • Campylobacter pinnipediorum (isolates:11; rSTs:11 tree)
          • Campylobacter porcelli (isolates:7; rSTs:7 tree)
          • Campylobacter portucalensis (isolates:1; rSTs:1)
          • Campylobacter rectus (isolates:4; rSTs:2)
          • Campylobacter showae (isolates:11; rSTs:7 tree)
          • Campylobacter sp. (isolates:1178; rSTs:237 tree)
          • Campylobacter sputorum (isolates:17; rSTs:11 tree)
          • Campylobacter subantarcticus (isolates:3; rSTs:2)
          • Campylobacter suis (isolates:1; rSTs:1)
          • Campylobacter taeniopygiae (isolates:1; rSTs:1)
          • Campylobacter troglodytis (isolates:1)
          • Campylobacter upsaliensis (isolates:746; rSTs:656 tree)
          • Campylobacter ureolyticus (isolates:41; rSTs:28 tree)
          • Campylobacter vicugnae (isolates:13; rSTs:9 tree)
          • Campylobacter volucris (isolates:18; rSTs:13 tree)
          • Campylobacter vulpis (isolates:16; rSTs:6 tree)
          • Candidatus Campylobacter infans (isolates:1; rSTs:1)
      • Helicobacteraceae (isolates:3817; rSTs:3629)
        • Helicobacter (isolates:3815; rSTs:3628)
          • Helicobacter acinonychis (isolates:8; rSTs:4 tree)
          • Helicobacter ailurogastricus (isolates:11; rSTs:7 tree)
          • Helicobacter anatolicus (isolates:3; rSTs:3 tree)
          • Helicobacter anseris (isolates:1; rSTs:1)
          • Helicobacter apodemus (isolates:2; rSTs:2)
          • Helicobacter aurati (isolates:2; rSTs:1)
          • Helicobacter baculiformis (isolates:1; rSTs:1)
          • Helicobacter bilis (isolates:5; rSTs:1)
          • Helicobacter bizzozeronii (isolates:14; rSTs:13 tree)
          • Helicobacter brantae (isolates:1; rSTs:1)
          • Helicobacter burdigaliensis (isolates:1; rSTs:1)
          • Helicobacter canadensis (isolates:5; rSTs:2)
          • Helicobacter canis (isolates:6; rSTs:3 tree)
          • Helicobacter cetorum (isolates:5; rSTs:5 tree)
          • Helicobacter cholecystus (isolates:4; rSTs:3 tree)
          • Helicobacter cinaedi (isolates:58; rSTs:13 tree)
          • Helicobacter colisuis (isolates:3; rSTs:3 tree)
          • Helicobacter cynogastricus (isolates:1; rSTs:1)
          • Helicobacter didelphidarum (isolates:1; rSTs:1)
          • Helicobacter enhydrae (isolates:1; rSTs:1)
          • Helicobacter equorum (isolates:2; rSTs:2)
          • Helicobacter felis (isolates:23; rSTs:16 tree)
          • Helicobacter fennelliae (isolates:5; rSTs:4 tree)
          • Helicobacter ganmani (isolates:1; rSTs:1)
          • Helicobacter heilmannii (isolates:10; rSTs:7 tree)
          • Helicobacter hepaticus (isolates:1; rSTs:1)
          • Helicobacter himalayensis (isolates:1; rSTs:1)
          • Helicobacter ibis (isolates:1; rSTs:1)
          • Helicobacter jaachi (isolates:1; rSTs:2)
          • Helicobacter japonicus (isolates:1; rSTs:1)
          • Helicobacter kayseriensis (isolates:2; rSTs:1)
          • Helicobacter labacensis (isolates:1; rSTs:1)
          • Helicobacter labetoulli (isolates:1; rSTs:1)
          • Helicobacter macacae (isolates:2; rSTs:1)
          • Helicobacter magdeburgensis (isolates:1; rSTs:1)
          • Helicobacter marmotae (isolates:2; rSTs:1)
          • Helicobacter mastomyrinus (isolates:1; rSTs:1)
          • Helicobacter mehlei (isolates:3; rSTs:3 tree)
          • Helicobacter mesocricetorum (isolates:1; rSTs:1)
          • Helicobacter muridarum (isolates:5; rSTs:2)
          • Helicobacter mustelae (isolates:3; rSTs:2)
          • Helicobacter pametensis (isolates:3; rSTs:1)
          • Helicobacter pullorum (isolates:26; rSTs:20 tree)
          • Helicobacter pylori (isolates:3480; rSTs:3127)
          • Helicobacter rappini (isolates:1; rSTs:1)
          • Helicobacter rodentium (isolates:1; rSTs:1)
          • Helicobacter saguini (isolates:5; rSTs:3 tree)
          • Helicobacter salomonis (isolates:6; rSTs:5 tree)
          • Helicobacter sp. (isolates:29; rSTs:308 tree)
          • Helicobacter suis (isolates:44; rSTs:33 tree)
          • Helicobacter trogontum (isolates:5; rSTs:3 tree)
          • Helicobacter turcicus (isolates:2; rSTs:1)
          • Helicobacter typhlonius (isolates:2; rSTs:2)
          • Helicobacter valdiviensis (isolates:1; rSTs:1)
          • Helicobacter vulpis (isolates:1; rSTs:1)
          • Helicobacter winghamensis (isolates:8; rSTs:3 tree)
        • Wolinella (isolates:2; rSTs:1)
          • Wolinella succinogenes (isolates:2; rSTs:1)
      • Hydrogenimonadaceae (isolates:7; rSTs:6 tree)
        • Hydrogenimonas (isolates:7; rSTs:6 tree)
          • Hydrogenimonas cancrithermarum (isolates:1; rSTs:1)
          • Hydrogenimonas sp. (isolates:1; rSTs:1)
          • Hydrogenimonas thermophila (isolates:4; rSTs:3 tree)
          • Hydrogenimonas urashimensis (isolates:1; rSTs:1)
      • Sulfurimonadaceae (isolates:28; rSTs:29 tree)
        • Sulfuricurvum (isolates:3; rSTs:4 tree)
          • Sulfuricurvum kujiense (isolates:1; rSTs:1)
          • Sulfuricurvum sp. (isolates:2; rSTs:3 tree)
        • Sulfurimonas (isolates:24; rSTs:24 tree)
          • Candidatus Sulfurimonas baltica (isolates:1; rSTs:1)
          • Candidatus Sulfurimonas marisnigri (isolates:1; rSTs:1)
          • Sulfurimonas aquatica (isolates:1; rSTs:1)
          • Sulfurimonas autotrophica (isolates:1; rSTs:1)
          • Sulfurimonas crateris (isolates:1; rSTs:1)
          • Sulfurimonas denitrificans (isolates:1; rSTs:1)
          • Sulfurimonas gotlandica (isolates:2; rSTs:1)
          • Sulfurimonas hongkongensis (isolates:1; rSTs:1)
          • Sulfurimonas hydrogeniphila (isolates:1; rSTs:1)
          • Sulfurimonas indica (isolates:1; rSTs:1)
          • Sulfurimonas lithotrophica (isolates:1; rSTs:1)
          • Sulfurimonas marina (isolates:1; rSTs:1)
          • Sulfurimonas paralvinellae (isolates:1; rSTs:1)
          • Sulfurimonas sediminis (isolates:1; rSTs:1)
          • Sulfurimonas sp. (isolates:8; rSTs:9 tree)
          • Sulfurimonas xiamenensis (isolates:1; rSTs:1)
        • Thiovulum (isolates:1; rSTs:1)
          • Thiovulum sp. (isolates:1; rSTs:1)
      • Sulfurospirillaceae (isolates:22; rSTs:19 tree)
        • Sulfurospirillum (isolates:22; rSTs:19 tree)
          • Sulfurospirillum arcachonense (isolates:1; rSTs:1)
          • Sulfurospirillum arsenophilum (isolates:1; rSTs:1)
          • Sulfurospirillum barnesii (isolates:1; rSTs:1)
          • Sulfurospirillum cavolei (isolates:2; rSTs:2)
          • Sulfurospirillum deleyianum (isolates:1; rSTs:1)
          • Sulfurospirillum diekertiae (isolates:5; rSTs:4 tree)
          • Sulfurospirillum halorespirans (isolates:1; rSTs:1)
          • Sulfurospirillum multivorans (isolates:2; rSTs:1)
          • Sulfurospirillum oryzae (isolates:1; rSTs:1)
          • Sulfurospirillum sp. (isolates:6; rSTs:5 tree)
          • Sulfurospirillum tamanensis (isolates:1; rSTs:1)
      • Sulfurovaceae (isolates:12; rSTs:11 tree)
        • Nitratifractor (isolates:1; rSTs:1)
          • Nitratifractor salsuginis (isolates:1; rSTs:1)
        • Sulfurovum (isolates:11; rSTs:10 tree)
          • Sulfurovum indicum (isolates:1; rSTs:1)
          • Sulfurovum lithotrophicum (isolates:1; rSTs:1)
          • Sulfurovum mangrovi (isolates:1; rSTs:1)
          • Sulfurovum riftiae (isolates:1; rSTs:1)
          • Sulfurovum sp. (isolates:5; rSTs:5 tree)
          • Sulfurovum xiamenensis (isolates:1; rSTs:1)
          • Sulfurovum zhangzhouensis (isolates:1)
    • Nautiliales (isolates:24; rSTs:18 tree)
      • Nautiliaceae (isolates:13; rSTs:10 tree)
        • Caminibacter (isolates:4; rSTs:2)
          • Caminibacter mediatlanticus (isolates:2; rSTs:1)
          • Caminibacter pacificus (isolates:2; rSTs:1)
        • Lebetimonas (isolates:7; rSTs:6 tree)
          • Lebetimonas natsushimae (isolates:1; rSTs:1)
          • Lebetimonas sp. (isolates:6; rSTs:5 tree)
        • Nautilia (isolates:2; rSTs:2)
          • Nautilia profundicola (isolates:1; rSTs:1)
          • Nautilia sp. (isolates:1; rSTs:1)
      • Nitratiruptoraceae (isolates:11; rSTs:8 tree)
        • Nitratiruptor (isolates:8; rSTs:5 tree)
          • Nitratiruptor sp. (isolates:6; rSTs:4 tree)
          • Nitratiruptor tergarcus (isolates:2; rSTs:1)
        • Nitrosophilus (isolates:3; rSTs:3 tree)
          • Nitrosophilus alvini (isolates:1; rSTs:1)
          • Nitrosophilus kaiyonis (isolates:1; rSTs:1)
          • Nitrosophilus labii (isolates:1; rSTs:1)
• Candidatus Absconditibacteriota (isolates:2)
• Candidatus Aerophobetes (isolates:1)
• Candidatus Altimarinota (isolates:1)
• Candidatus Aminicenantota (isolates:1; rSTs:1)
  • Candidatus Aminicenantia (isolates:1; rSTs:1)
    • Candidatus Aminicenantales (isolates:1; rSTs:1)
      • Candidatus Aminicenantaceae (isolates:1; rSTs:1)
        • Candidatus Aminicenans (isolates:1; rSTs:1)
          • Candidatus Aminicenans sakinawicola (isolates:1; rSTs:1)
• Candidatus Auribacterota (isolates:1)
  • Candidatus Auribacteria (isolates:1)
    • Candidatus Auribacterales (isolates:1)
      • Candidatus Auribacteraceae (isolates:1)
        • Candidatus Auribacter (isolates:1)
          • Candidatus Auribacter fodinae (isolates:1)
• Candidatus Bipolaricaulota (isolates:1; rSTs:1)
  • Candidatus Bipolaricaulia (isolates:1; rSTs:1)
    • Candidatus Bipolaricaulales (isolates:1; rSTs:1)
      • Candidatus Bipolaricaulaceae (isolates:1; rSTs:1)
        • Candidatus Bipolaricaulis (isolates:1; rSTs:1)
          • Candidatus Bipolaricaulis anaerobius (isolates:1; rSTs:1)
• Candidatus Calescamantes (isolates:1)
• Candidatus Cloacimonadota (isolates:2; rSTs:2)
  • Candidatus Cloacimonadia (isolates:2; rSTs:2)
    • Candidatus Cloacimonadales (isolates:2; rSTs:2)
      • Candidatus Cloacimonadaceae (isolates:2; rSTs:2)
        • Candidatus Cloacimonas (isolates:1; rSTs:1)
          • Candidatus Cloacimonas sp. (isolates:1; rSTs:1)
        • Candidatus Syntrophosphaera (isolates:1; rSTs:1)
          • Candidatus Syntrophosphaera thermopropionivorans (isolates:1; rSTs:1)
• Candidatus Cryosericota (isolates:7)
  • Candidatus Cryosericia (isolates:7)
    • Candidatus Cryosericales (isolates:7)
      • Candidatus Cryosericaceae (isolates:7)
        • Candidatus Cryosericum (isolates:7)
          • Candidatus Cryosericum hinesii (isolates:3)
          • Candidatus Cryosericum odellii (isolates:2)
          • Candidatus Cryosericum septentrionale (isolates:1)
          • Candidatus Cryosericum terrychapinii (isolates:1)
• Candidatus Deferrimicrobiota (isolates:1; rSTs:1)
  • Candidatus Deferrimicrobia (isolates:1; rSTs:1)
    • Candidatus Deferrimicrobiales (isolates:1; rSTs:1)
      • Candidatus Deferrimicrobiaceae (isolates:1; rSTs:1)
        • Candidatus Deferrimicrobium (isolates:1; rSTs:1)
          • Candidatus Deferrimicrobium borealis (isolates:1; rSTs:1)
• Candidatus Fermentibacterota (isolates:4; rSTs:1)
  • Candidatus Fermentibacteria (class) (isolates:3; rSTs:1)
    • Candidatus Fermentibacterales (isolates:3; rSTs:1)
      • Candidatus Fermentibacteraceae (isolates:3; rSTs:1)
        • Candidatus Fermentibacter (isolates:3; rSTs:1)
          • Candidatus Fermentibacter daniensis (isolates:3; rSTs:1)
• Candidatus Fervidibacterota (isolates:3)
• Candidatus Hydrogenedentota (isolates:1)
  • Candidatus Hydrogenedentia (isolates:1)
    • Candidatus Hydrogenedentales (isolates:1)
      • Candidatus Hydrogenedentaceae (isolates:1)
        • Candidatus Hydrogenedens (isolates:1)
          • Candidatus Hydrogenedens terephthalaticus (isolates:1)
• Candidatus Kryptoniota (isolates:20; rSTs:3 tree)
• Candidatus Latescibacterota (isolates:1)
• Candidatus Lithacetigenota (isolates:5)
• Candidatus Melainabacteria (isolates:6; rSTs:3 tree)
  • Vampirovibriophyceae (isolates:5; rSTs:3 tree)
    • Vampirovibrionales (isolates:5; rSTs:3 tree)
• Candidatus Methylomirabilota (isolates:4; rSTs:3 tree)
  • Candidatus Methylomirabilia (isolates:4; rSTs:3 tree)
    • Candidatus Methylomirabilales (isolates:4; rSTs:3 tree)
      • Candidatus Methylomirabilaceae (isolates:4; rSTs:3 tree)
        • Candidatus Methylomirabilis (isolates:4; rSTs:3 tree)
          • Candidatus Methylomirabilis lanthanidiphila (isolates:2; rSTs:1)
          • Candidatus Methylomirabilis limnetica (isolates:1; rSTs:1)
          • Candidatus Methylomirabilis oxygeniifera (isolates:1; rSTs:1)
• Candidatus Microgenomates (isolates:1)
• Candidatus Moduliflexota (isolates:2; rSTs:2)
  • Candidatus Moduliflexia (isolates:1; rSTs:1)
    • Candidatus Moduliflexales (isolates:1; rSTs:1)
      • Candidatus Moduliflexaceae (isolates:1; rSTs:1)
        • Candidatus Moduliflexus (isolates:1; rSTs:1)
          • Candidatus Moduliflexus flocculans (isolates:1; rSTs:1)
  • Candidatus Vecturitrichia (isolates:1; rSTs:1)
    • Candidatus Vecturitrichales (isolates:1; rSTs:1)
      • Candidatus Vecturitrichaceae (isolates:1; rSTs:1)
        • Candidatus Vecturithrix (isolates:1; rSTs:1)
          • Candidatus Vecturithrix granuli (isolates:1; rSTs:1)
• Candidatus Omnitrophota (isolates:3; rSTs:2)
• Candidatus Paceibacterota (isolates:1)
  • Candidatus Paceibacteria (isolates:1)
    • Candidatus Paceibacterales (isolates:1)
      • Candidatus Paceibacteraceae (isolates:1)
        • Candidatus Paceibacter (isolates:1)
          • Candidatus Paceibacter normanii (isolates:1)
• Candidatus Saccharibacteria (isolates:27; rSTs:13 tree)
  • Candidatus Nanoperiomorbia (isolates:2; rSTs:2)
    • Candidatus Nanoperiomorbales (isolates:2; rSTs:2)
      • Candidatus Nanoperiomorbaceae (isolates:2; rSTs:2)
        • Candidatus Nanoperiomorbus (isolates:2; rSTs:2)
          • Candidatus Nanoperiomorbus periodonticus (isolates:2; rSTs:2)
  • Candidatus Nanosyncoccalia (isolates:3)
    • Candidatus Nanogingivales (isolates:1)
      • Candidatus Nanogingivalaceae (isolates:1)
        • Candidatus Nanogingivalis (isolates:1)
          • Candidatus Nanogingivalis gingivitcus (isolates:1)
    • Candidatus Nanosyncoccales (isolates:2)
      • Candidatus Nanosyncoccaceae (isolates:2)
        • Candidatus Nanosyncoccus (isolates:2)
          • Candidatus Nanosyncoccus alces (isolates:1)
          • Candidatus Nanosyncoccus nanoralicus (isolates:1)
  • Candidatus Saccharimonadia (isolates:7; rSTs:3 tree)
    • Candidatus Nanosynbacterales (isolates:3; rSTs:2)
      • Candidatus Nanosynbacteraceae (isolates:3; rSTs:2)
        • Candidatus Nanosynbacter (isolates:3; rSTs:2)
          • Candidatus Nanosynbacter featherlites (isolates:2; rSTs:1)
          • Candidatus Nanosynbacter lyticus (isolates:1; rSTs:1)
    • Candidatus Saccharimonadales (isolates:4; rSTs:1)
      • Candidatus Saccharimonadaceae (isolates:4; rSTs:1)
        • Candidatus Chaera (isolates:1)
          • Candidatus Chaera renei (isolates:1)
        • Candidatus Microsaccharimonas (isolates:1)
          • Candidatus Microsaccharimonas sossegonensis (isolates:1)
        • Candidatus Nanosynsacchari (isolates:1)
          • Candidatus Nanosynsacchari sp. (isolates:1)
        • Candidatus Saccharimonas (isolates:1; rSTs:1)
          • Candidatus Saccharimonas aalborgensis (isolates:1; rSTs:1)
• Candidatus Tectimicrobiota (isolates:3)
  • Candidatus Entotheonellia (isolates:3)
    • Candidatus Entotheonellales (isolates:3)
      • Candidatus Entotheonellaceae (isolates:3)
        • Candidatus Entotheonella (isolates:3)
          • Candidatus Entotheonella factor (isolates:1)
          • Candidatus Entotheonella gemina (isolates:1)
          • Candidatus Entotheonella palauensis (isolates:1)
• Candidatus Tharpellota (isolates:3)
  • Candidatus Tharpellia (isolates:3)
    • Candidatus Tharpellales (isolates:3)
      • Candidatus Tharpellaceae (isolates:3)
        • Candidatus Tharpella (isolates:3)
          • Candidatus Tharpella aukensis (isolates:1)
          • Candidatus Tharpella sp. (isolates:2)
• Chlamydiota (isolates:1222; rSTs:530 tree)
  • Chlamydiia (isolates:1222; rSTs:530 tree)
    • Chlamydiales (isolates:1192; rSTs:504 tree)
      • Candidatus Clavichlamydiaceae (isolates:1)
        • Candidatus Clavichlamydia (isolates:1)
          • Candidatus Clavichlamydia salmonicola (isolates:1)
      • Chlamydiaceae (isolates:1191; rSTs:504 tree)
        • Candidatus Rubidus (isolates:1; rSTs:1)
          • Candidatus Rubidus massiliensis (isolates:1; rSTs:1)
        • Chlamydia (isolates:1185; rSTs:498 tree)
          • Candidatus Chlamydia corallus (isolates:1; rSTs:1)
          • Candidatus Chlamydia sanziniae (isolates:1; rSTs:1)
          • Chlamydia abortus (isolates:65; rSTs:23 tree)
          • Chlamydia avium (isolates:3; rSTs:4 tree)
          • Chlamydia buteonis (isolates:5; rSTs:4 tree)
          • Chlamydia caviae (isolates:1; rSTs:1)
          • Chlamydia crocodili (isolates:1; rSTs:1)
          • Chlamydia felis (isolates:1; rSTs:1)
          • Chlamydia gallinacea (isolates:15; rSTs:12 tree)
          • Chlamydia ibidis (isolates:2; rSTs:1)
          • Chlamydia muridarum (isolates:32; rSTs:3 tree)
          • Chlamydia pecorum (isolates:17; rSTs:13 tree)
          • Chlamydia pneumoniae (isolates:13; rSTs:6 tree)
          • Chlamydia poikilotherma (isolates:1; rSTs:1)
          • Chlamydia psittaci (isolates:90; rSTs:39 tree)
          • Chlamydia serpentis (isolates:1; rSTs:1)
          • Chlamydia sp. (isolates:5; rSTs:1)
          • Chlamydia suis (isolates:76; rSTs:43 tree)
          • Chlamydia trachomatis (isolates:855; rSTs:342 tree)
        • Chlamydiifrater (isolates:5; rSTs:5 tree)
          • Chlamydiifrater phoenicopteri (isolates:1; rSTs:1)
          • Chlamydiifrater volucris (isolates:4; rSTs:4 tree)
    • Parachlamydiales (isolates:30; rSTs:26 tree)
      • Candidatus Parilichlamydiaceae (isolates:1; rSTs:1)
        • Candidatus Similichlamydia (isolates:1; rSTs:1)
          • Candidatus Similichlamydia laticola (isolates:1; rSTs:1)
      • Candidatus Rhabdochlamydiaceae (isolates:5; rSTs:3 tree)
        • Candidatus Acheromyda (isolates:1)
          • Candidatus Acheromyda pituitae (isolates:1)
        • Candidatus Rhabdochlamydia (isolates:4; rSTs:3 tree)
          • Candidatus Rhabdochlamydia oedothoracis (isolates:1; rSTs:1)
          • Candidatus Rhabdochlamydia porcellionis (isolates:1; rSTs:1)
          • Candidatus Rhabdochlamydia sp. (isolates:2; rSTs:1)
      • Criblamydiaceae (isolates:2; rSTs:2)
        • Criblamydia (isolates:1; rSTs:1)
          • Criblamydia sequanensis (isolates:1; rSTs:1)
        • Estrella (isolates:1; rSTs:1)
          • Estrella lausannensis (isolates:1; rSTs:1)
      • Parachlamydiaceae (isolates:19; rSTs:18 tree)
        • Candidatus Protochlamydia (isolates:8; rSTs:8 tree)
          • Candidatus Protochlamydia amoebophila (isolates:3; rSTs:3 tree)
          • Candidatus Protochlamydia massiliensis (isolates:1; rSTs:1)
          • Candidatus Protochlamydia naegleriophila (isolates:1; rSTs:1)
          • Candidatus Protochlamydia phocaeensis (isolates:1; rSTs:1)
          • Candidatus Protochlamydia sp. (isolates:2; rSTs:2)
        • Neochlamydia (isolates:6; rSTs:5 tree)
          • Neochlamydia sp. (isolates:6; rSTs:5 tree)
        • Parachlamydia (isolates:5; rSTs:5 tree)
          • Parachlamydia acanthamoebae (isolates:4; rSTs:4 tree)
          • Parachlamydia sp. (isolates:1; rSTs:1)
      • Simkaniaceae (isolates:2; rSTs:1)
        • Candidatus Neptunochlamydia (isolates:1)
          • Candidatus Neptunochlamydia vexilliferae (isolates:1)
        • Simkania (isolates:1; rSTs:1)
          • Simkania negevensis (isolates:1; rSTs:1)
      • Waddliaceae (isolates:1; rSTs:1)
        • Waddlia (isolates:1; rSTs:1)
          • Waddlia chondrophila (isolates:1; rSTs:1)
• Chlorobiota (isolates:35; rSTs:29 tree)
  • Chlorobiia (isolates:35; rSTs:29 tree)
    • Chlorobiales (isolates:35; rSTs:29 tree)
      • Chlorobiaceae (isolates:34; rSTs:28 tree)
        • Chlorobaculum (isolates:6; rSTs:5 tree)
          • Chlorobaculum limnaeum (isolates:1; rSTs:1)
          • Chlorobaculum parvum (isolates:1; rSTs:1)
          • Chlorobaculum sp. (isolates:2; rSTs:1)
          • Chlorobaculum tepidum (isolates:1; rSTs:1)
          • Chlorobaculum thiosulfatiphilum (isolates:1; rSTs:1)
        • Chlorobium (isolates:13; rSTs:11 tree)
          • Candidatus Chlorobium masyuteum (isolates:1; rSTs:1)
          • Chlorobium chlorochromatii (isolates:1; rSTs:1)
          • Chlorobium ferrooxidans (isolates:1)
          • Chlorobium limicola (isolates:2; rSTs:2)
          • Chlorobium phaeobacteroides (isolates:1; rSTs:1)
          • Chlorobium phaeovibrioides (isolates:6; rSTs:5 tree)
          • Chlorobium sp. (isolates:1; rSTs:1)
        • Pelodictyon (isolates:3; rSTs:3 tree)
          • Pelodictyon luteolum (isolates:2; rSTs:2)
          • Pelodictyon phaeoclathratiforme (isolates:1; rSTs:1)
        • Prosthecochloris (isolates:12; rSTs:9 tree)
          • Prosthecochloris aestuarii (isolates:1; rSTs:1)
          • Prosthecochloris ethylica (isolates:3; rSTs:1)
          • Prosthecochloris marina (isolates:1; rSTs:1)
          • Prosthecochloris sp. (isolates:7; rSTs:6 tree)
      • Chloroherpetonaceae (isolates:1; rSTs:1)
        • Chloroherpeton (isolates:1; rSTs:1)
          • Chloroherpeton thalassium (isolates:1; rSTs:1)
• Chloroflexota (isolates:125; rSTs:98 tree)
  • Anaerolineae (isolates:18; rSTs:13 tree)
    • Aggregatilineales (isolates:1)
      • Aggregatilineaceae (isolates:1)
        • Aggregatilinea (isolates:1)
          • Aggregatilinea lenta (isolates:1)
    • Anaerolineales (isolates:17; rSTs:13 tree)
      • Anaerolineaceae (isolates:17; rSTs:13 tree)
        • Anaerolinea (isolates:2; rSTs:2)
          • Anaerolinea thermolimosa (isolates:1; rSTs:1)
          • Anaerolinea thermophila (isolates:1; rSTs:1)
        • Bellilinea (isolates:2; rSTs:1)
          • Bellilinea caldifistulae (isolates:2; rSTs:1)
        • Brevefilum (isolates:1; rSTs:1)
          • Brevefilum fermentans (isolates:1; rSTs:1)
        • Flexilinea (isolates:1; rSTs:1)
          • Flexilinea flocculi (isolates:1; rSTs:1)
        • Leptolinea (isolates:3; rSTs:2)
          • Leptolinea sp. (isolates:1; rSTs:1)
          • Leptolinea tardivitalis (isolates:2; rSTs:1)
        • Levilinea (isolates:2; rSTs:1)
          • Levilinea saccharolytica (isolates:2; rSTs:1)
        • Longilinea (isolates:1; rSTs:1)
          • Longilinea arvoryzae (isolates:1; rSTs:1)
        • Ornatilinea (isolates:1; rSTs:1)
          • Ornatilinea apprima (isolates:1; rSTs:1)
        • Pelolinea (isolates:2; rSTs:1)
          • Pelolinea submarina (isolates:2; rSTs:1)
        • Thermanaerothrix (isolates:2; rSTs:2)
          • Thermanaerothrix daxensis (isolates:1; rSTs:1)
          • Thermanaerothrix sp. (isolates:1; rSTs:1)
  • Ardenticatenia (isolates:3; rSTs:1)
    • Ardenticatenales (isolates:2; rSTs:1)
      • Ardenticatenaceae (isolates:2; rSTs:1)
        • Ardenticatena (isolates:2; rSTs:1)
          • Ardenticatena maritima (isolates:2; rSTs:1)
    • Candidatus Promineifilales (isolates:1)
      • Candidatus Promineifilaceae (isolates:1)
        • Candidatus Promineifilum (isolates:1)
          • Candidatus Promineifilum breve (isolates:1)
  • Caldilineae (isolates:2; rSTs:2)
    • Caldilineales (isolates:2; rSTs:2)
      • Caldilineaceae (isolates:2; rSTs:2)
        • Caldilinea (isolates:1; rSTs:1)
          • Caldilinea aerophila (isolates:1; rSTs:1)
        • Litorilinea (isolates:1; rSTs:1)
          • Litorilinea aerophila (isolates:1; rSTs:1)
  • Candidatus Thermofonsia (isolates:2)
    • Phototrophicales (isolates:1)
      • Phototrophicaceae (isolates:1)
        • Phototrophicus (isolates:1)
          • Phototrophicus methaneseepsis (isolates:1)
  • Chloroflexia (isolates:23; rSTs:19 tree)
    • Candidatus Chloroheliales (isolates:1)
      • Candidatus Chloroheliaceae (isolates:1)
        • Candidatus Chlorohelix (isolates:1)
          • Candidatus Chlorohelix allophototropha (isolates:1)
    • Chloroflexales (isolates:17; rSTs:15 tree)
      • Chloroflexaceae (isolates:7; rSTs:6 tree)
        • Chloroflexus (isolates:7; rSTs:6 tree)
          • Chloroflexus aggregans (isolates:1; rSTs:1)
          • Chloroflexus aurantiacus (isolates:2; rSTs:1)
          • Chloroflexus islandicus (isolates:1; rSTs:1)
          • Chloroflexus sp. (isolates:3; rSTs:3 tree)
      • Oscillochloridaceae (isolates:7; rSTs:7 tree)
        • Candidatus Chloroploca (isolates:3; rSTs:3 tree)
          • Candidatus Chloroploca asiatica (isolates:1; rSTs:1)
          • Candidatus Chloroploca mongolica (isolates:1; rSTs:1)
          • Candidatus Chloroploca sp. (isolates:1; rSTs:1)
        • Candidatus Viridilinea (isolates:1; rSTs:1)
          • Candidatus Viridilinea mediisalina (isolates:1; rSTs:1)
        • Oscillochloris (isolates:3; rSTs:3 tree)
          • Candidatus Oscillochloris fontis (isolates:1; rSTs:1)
          • Oscillochloris sp. (isolates:1; rSTs:1)
          • Oscillochloris trichoides (isolates:1; rSTs:1)
      • Roseiflexaceae (isolates:3; rSTs:2)
        • Kouleothrix (isolates:1)
          • Kouleothrix aurantiaca (isolates:1)
        • Roseiflexus (isolates:2; rSTs:2)
          • Roseiflexus castenholzii (isolates:1; rSTs:1)
          • Roseiflexus sp. (isolates:1; rSTs:1)
    • Herpetosiphonales (isolates:4; rSTs:4 tree)
      • Herpetosiphonaceae (isolates:4; rSTs:4 tree)
        • Herpetosiphon (isolates:4; rSTs:4 tree)
          • Herpetosiphon geysericola (isolates:1; rSTs:1)
          • Herpetosiphon giganteus (isolates:1; rSTs:1)
          • Herpetosiphon gulosus (isolates:1; rSTs:1)
          • Herpetosiphon llansteffanensis (isolates:1; rSTs:1)
    • Kallotenuales (isolates:1)
      • Kallotenuaceae (isolates:1)
        • Kallotenue (isolates:1)
          • Kallotenue papyrolyticum (isolates:1)
  • Dehalococcoidia (isolates:50; rSTs:39 tree)
    • Candidatus Lucifugimonadales (isolates:4)
      • Candidatus Lucifugimonadaceae (isolates:4)
        • Candidatus Lucifugimonas (isolates:4)
          • Candidatus Lucifugimonas marina (isolates:4)
    • Dehalococcoidales (isolates:46; rSTs:39 tree)
      • Dehalococcoidaceae (isolates:46; rSTs:39 tree)
        • Dehalococcoides (isolates:39; rSTs:35 tree)
          • Dehalococcoides mccartyi (isolates:37; rSTs:33 tree)
          • Dehalococcoides sp. (isolates:2; rSTs:2)
        • Dehalogenimonas (isolates:7; rSTs:4 tree)
          • Dehalogenimonas alkenigignens (isolates:2; rSTs:2)
          • Dehalogenimonas etheniformans (isolates:2; rSTs:1)
          • Dehalogenimonas formicexedens (isolates:1; rSTs:1)
          • Dehalogenimonas sp. (isolates:2)
  • Ktedonobacteria (isolates:21; rSTs:20 tree)
    • Ktedonobacterales (isolates:17; rSTs:16 tree)
      • Dictyobacteraceae (isolates:8; rSTs:8 tree)
        • Dictyobacter (isolates:7; rSTs:7 tree)
          • Dictyobacter alpinus (isolates:1; rSTs:1)
          • Dictyobacter arantiisoli (isolates:1; rSTs:1)
          • Dictyobacter aurantiacus (isolates:1; rSTs:1)
          • Dictyobacter formicarum (isolates:1; rSTs:1)
          • Dictyobacter kobayashii (isolates:1; rSTs:1)
          • Dictyobacter sp. (isolates:1; rSTs:1)
          • Dictyobacter vulcani (isolates:1; rSTs:1)
        • Tengunoibacter (isolates:1; rSTs:1)
          • Tengunoibacter tsumagoiensis (isolates:1; rSTs:1)
      • Ktedonobacteraceae (isolates:5; rSTs:5 tree)
        • Ktedonobacter (isolates:4; rSTs:4 tree)
          • Ktedonobacter racemifer (isolates:1; rSTs:1)
          • Ktedonobacter robiniae (isolates:1; rSTs:1)
          • Ktedonobacter sp. (isolates:2; rSTs:2)
        • Ktedonospora (isolates:1; rSTs:1)
          • Ktedonospora formicarum (isolates:1; rSTs:1)
      • Ktedonosporobacteraceae (isolates:1; rSTs:1)
        • Ktedonosporobacter (isolates:1; rSTs:1)
          • Ktedonosporobacter rubrisoli (isolates:1; rSTs:1)
      • Reticulibacteraceae (isolates:1; rSTs:1)
        • Reticulibacter (isolates:1; rSTs:1)
          • Reticulibacter mediterranei (isolates:1; rSTs:1)
      • Thermosporotrichaceae (isolates:2; rSTs:1)
        • Thermosporothrix (isolates:2; rSTs:1)
          • Thermosporothrix hazakensis (isolates:2; rSTs:1)
    • Thermogemmatisporales (isolates:4; rSTs:4 tree)
      • Thermogemmatisporaceae (isolates:4; rSTs:4 tree)
        • Thermogemmatispora (isolates:4; rSTs:4 tree)
          • Thermogemmatispora aurantia (isolates:1; rSTs:1)
          • Thermogemmatispora carboxidivorans (isolates:1; rSTs:1)
          • Thermogemmatispora onikobensis (isolates:1; rSTs:1)
          • Thermogemmatispora tikiterensis (isolates:1; rSTs:1)
  • Tepidiformia (isolates:3; rSTs:2)
    • Tepidiformales (isolates:3; rSTs:2)
      • Tepidiformaceae (isolates:3; rSTs:2)
        • Tepidiforma (isolates:3; rSTs:2)
          • Tepidiforma bonchosmolovskayae (isolates:1; rSTs:1)
          • Tepidiforma flava (isolates:1; rSTs:1)
          • Tepidiforma thermophila (isolates:1)
  • Thermoflexia (isolates:2; rSTs:1)
    • Thermoflexales (isolates:2; rSTs:1)
      • Thermoflexaceae (isolates:2; rSTs:1)
        • Thermoflexus (isolates:2; rSTs:1)
          • Candidatus Thermoflexus japonica (isolates:1)
          • Thermoflexus hugenholtzii (isolates:1; rSTs:1)
• Chrysiogenota (isolates:6; rSTs:4 tree)
  • Chrysiogenia (isolates:6; rSTs:4 tree)
    • Chrysiogenales (isolates:6; rSTs:4 tree)
      • Chrysiogenaceae (isolates:6; rSTs:4 tree)
        • Chrysiogenes (isolates:1; rSTs:1)
          • Chrysiogenes arsenatis (isolates:1; rSTs:1)
        • Desulfurispira (isolates:1; rSTs:1)
          • Desulfurispira natronophila (isolates:1; rSTs:1)
        • Desulfurispirillum (isolates:4; rSTs:2)
          • Desulfurispirillum indicum (isolates:4; rSTs:2)
• Coprothermobacterota (isolates:4; rSTs:4 tree)
  • Coprothermobacteria (isolates:4; rSTs:4 tree)
    • Coprothermobacterales (isolates:4; rSTs:4 tree)
      • Coprothermobacteraceae (isolates:4; rSTs:4 tree)
        • Coprothermobacter (isolates:4; rSTs:4 tree)
          • Coprothermobacter platensis (isolates:1; rSTs:1)
          • Coprothermobacter proteolyticus (isolates:3; rSTs:3 tree)
• Cyanobacteriota (isolates:937; rSTs:639 tree)
  • Cyanophyceae (isolates:932; rSTs:634 tree)
    • Acaryochloridales (isolates:44; rSTs:30 tree)
      • Acaryochloridaceae (isolates:7; rSTs:6 tree)
        • Acaryochloris (isolates:7; rSTs:6 tree)
          • Acaryochloris marina (isolates:3; rSTs:3 tree)
          • Acaryochloris sp. (isolates:2; rSTs:2)
          • Acaryochloris thomasi (isolates:2; rSTs:1)
      • Thermosynechococcaceae (isolates:37; rSTs:24 tree)
        • Pseudocalidococcus (isolates:1; rSTs:1)
          • Pseudocalidococcus azoricus (isolates:1; rSTs:1)
        • Thermosynechococcus (isolates:36; rSTs:23 tree)
          • Thermosynechococcus sichuanensis (isolates:1; rSTs:1)
          • Thermosynechococcus sp. (isolates:34; rSTs:21 tree)
          • Thermosynechococcus vestitus (isolates:1; rSTs:1)
    • Chroococcales (isolates:107; rSTs:105 tree)
      • Aphanothecaceae (isolates:27; rSTs:16 tree)
        • Aphanothece (isolates:3; rSTs:2 tree)
          • Aphanothece hegewaldii (isolates:1; rSTs:1)
          • Aphanothece sacrum (isolates:2; rSTs:1)
        • Candidatus Atelocyanobacterium (isolates:3; rSTs:3 tree)
          • Candidatus Atelocyanobacterium thalassa (isolates:3; rSTs:3 tree)
        • Crocosphaera (isolates:16; rSTs:6 tree)
          • Crocosphaera chwakensis (isolates:1; rSTs:1)
          • Crocosphaera sp. (isolates:1)
          • Crocosphaera subtropica (isolates:2; rSTs:1)
          • Crocosphaera watsonii (isolates:12; rSTs:4 tree)
        • Gloeothece (isolates:2; rSTs:2)
          • Gloeothece citriformis (isolates:1; rSTs:1)
          • Gloeothece verrucosa (isolates:1; rSTs:1)
        • Rippkaea (isolates:2; rSTs:2)
          • Rippkaea orientalis (isolates:2; rSTs:2)
        • Rubidibacter (isolates:1; rSTs:1)
          • Rubidibacter lacunae (isolates:1; rSTs:1)
      • Chroococcaceae (isolates:15; rSTs:10 tree)
        • Chondrocystis (isolates:1; rSTs:1)
          • Chondrocystis sp. (isolates:1; rSTs:1)
        • Chroococcus (isolates:1; rSTs:1)
          • Chroococcus sp. (isolates:1; rSTs:1)
        • Chroogloeocystis (isolates:2; rSTs:1)
          • Chroogloeocystis siderophila (isolates:2; rSTs:1)
        • Gloeocapsa (isolates:3; rSTs:2)
          • Gloeocapsa sp. (isolates:3; rSTs:2)
        • Gloeocapsopsis (isolates:8; rSTs:5 tree)
          • Gloeocapsopsis crepidinum (isolates:2; rSTs:1)
          • Gloeocapsopsis dulcis (isolates:5; rSTs:3 tree)
          • Gloeocapsopsis sp. (isolates:1; rSTs:1)
      • Entophysalidaceae (isolates:2; rSTs:1)
        • Chlorogloea (isolates:2; rSTs:1)
          • Chlorogloea sp. (isolates:2; rSTs:1)
      • Geminocystaceae (isolates:36; rSTs:23 tree)
        • Cyanobacterium (isolates:11; rSTs:11 tree)
          • Cyanobacterium aponinum (isolates:7; rSTs:7 tree)
          • Cyanobacterium sp. (isolates:2; rSTs:2)
          • Cyanobacterium stanieri (isolates:2; rSTs:2)
        • Geminocystis (isolates:3; rSTs:3 tree)
          • Geminocystis herdmanii (isolates:1; rSTs:1)
          • Geminocystis sp. (isolates:2; rSTs:2)
        • Picosynechococcus (isolates:22; rSTs:9 tree)
          • Picosynechococcus sp. (isolates:20; rSTs:7 tree)
          • [Leptolyngbya] sp. PCC 7376 (isolates:1; rSTs:1)
          • [Synechococcus] sp. NIES-970 (isolates:1; rSTs:1)
      • Halothecacae (isolates:2; rSTs:2)
        • Euhalothece (isolates:1; rSTs:1)
          • Euhalothece natronophila (isolates:1; rSTs:1)
        • Halothece (isolates:1; rSTs:1)
          • Halothece sp. (isolates:1; rSTs:1)
      • Microcystaceae (isolates:25; rSTs:53 tree)
        • Microcystis (isolates:25; rSTs:53 tree)
          • Microcystis aeruginosa (isolates:14; rSTs:15 tree)
          • Microcystis panniformis (isolates:1; rSTs:1)
          • Microcystis sp. (isolates:6; rSTs:34 tree)
          • Microcystis viridis (isolates:1; rSTs:1)
          • Microcystis wesenbergii (isolates:3; rSTs:2)
    • Chroococcidiopsidales (isolates:8; rSTs:5 tree)
      • Aliterellaceae (isolates:2; rSTs:1)
        • Aliterella (isolates:2; rSTs:1)
          • Aliterella atlantica (isolates:2; rSTs:1)
      • Chroococcidiopsidaceae (isolates:6; rSTs:4 tree)
        • Chroococcidiopsis (isolates:6; rSTs:4 tree)
          • Chroococcidiopsis cubana (isolates:2; rSTs:1)
          • Chroococcidiopsis sp. (isolates:3; rSTs:2)
          • Chroococcidiopsis thermalis (isolates:1; rSTs:1)
    • Coleofasciculales (isolates:8; rSTs:7 tree)
      • Coleofasciculaceae (isolates:8; rSTs:7 tree)
        • Allocoleopsis (isolates:1; rSTs:1)
          • Allocoleopsis franciscana (isolates:1; rSTs:1)
        • Coleofasciculus (isolates:1; rSTs:1)
          • Coleofasciculus chthonoplastes (isolates:1; rSTs:1)
        • Funiculus (isolates:5; rSTs:5 tree)
          • Funiculus sociatus (isolates:5; rSTs:5 tree)
        • Limnofasciculus (isolates:1)
          • Limnofasciculus baicalensis (isolates:1)
    • Desertifilales (isolates:9; rSTs:5 tree)
      • Desertifilaceae (isolates:9; rSTs:5 tree)
        • Desertifilum (isolates:4; rSTs:2)
          • Desertifilum sp. (isolates:3; rSTs:1)
          • Desertifilum tharense (isolates:1; rSTs:1)
        • Roseofilum (isolates:5; rSTs:3 tree)
          • Roseofilum acuticapitatum (isolates:1; rSTs:1)
          • Roseofilum capinflatum (isolates:1; rSTs:1)
          • Roseofilum casamattae (isolates:1; rSTs:1)
          • Roseofilum halophilum (isolates:1)
          • Roseofilum reptotaenium (isolates:1)
    • Geitlerinematales (isolates:1; rSTs:1)
      • Geitlerinemataceae (isolates:1; rSTs:1)
        • Geitlerinema (isolates:1; rSTs:1)
          • Geitlerinema sp. (isolates:1; rSTs:1)
    • Gloeobacterales (isolates:4; rSTs:3 tree)
      • Anthocerotibacteraceae (isolates:1)
        • Anthocerotibacter (isolates:1)
          • Anthocerotibacter panamensis (isolates:1)
      • Gloeobacteraceae (isolates:3; rSTs:3 tree)
        • Gloeobacter (isolates:3; rSTs:3 tree)
          • Gloeobacter kilaueensis (isolates:1; rSTs:1)
          • Gloeobacter morelensis (isolates:1; rSTs:1)
          • Gloeobacter violaceus (isolates:1; rSTs:1)
    • Gloeomargaritales (isolates:1; rSTs:1)
      • Gloeomargaritaceae (isolates:1; rSTs:1)
        • Gloeomargarita (isolates:1; rSTs:1)
          • Gloeomargarita lithophora (isolates:1; rSTs:1)
    • Gomontiellales (isolates:5; rSTs:4 tree)
      • Chamaesiphonaceae (isolates:2; rSTs:2)
        • Chamaesiphon (isolates:2; rSTs:2)
          • Chamaesiphon minutus (isolates:1; rSTs:1)
          • Chamaesiphon polymorphus (isolates:1; rSTs:1)
      • Cyanothecaceae (isolates:2; rSTs:1)
        • Cyanothece (isolates:2; rSTs:1)
          • Cyanothece sp. (isolates:2; rSTs:1)
      • Gomontiellaceae (isolates:1; rSTs:1)
        • Crinalium (isolates:1; rSTs:1)
          • Crinalium epipsammum (isolates:1; rSTs:1)
    • Leptolyngbyales (isolates:43; rSTs:29 tree)
      • Leptolyngbyaceae (isolates:35; rSTs:22 tree)
        • Alkalinema (isolates:1; rSTs:1)
          • Alkalinema sp. (isolates:1; rSTs:1)
        • Kovacikia (isolates:1; rSTs:1)
          • Kovacikia minuta (isolates:1; rSTs:1)
        • Leptodesmis (isolates:1; rSTs:1)
          • Leptodesmis sichuanensis (isolates:1; rSTs:1)
        • Leptolyngbya (isolates:25; rSTs:13 tree)
          • Leptolyngbya boryana (isolates:7; rSTs:3 tree)
          • Leptolyngbya ectocarpi (isolates:1; rSTs:1)
          • Leptolyngbya iicbica (isolates:1; rSTs:1)
          • Leptolyngbya ohadii (isolates:1; rSTs:1)
          • Leptolyngbya sp. (isolates:15; rSTs:7 tree)
        • Leptothermofonsia (isolates:1; rSTs:1)
          • Leptothermofonsia sichuanensis (isolates:1; rSTs:1)
        • Myxacorys (isolates:1; rSTs:1)
          • Myxacorys almedinensis (isolates:1; rSTs:1)
        • Phormidesmis (isolates:1; rSTs:1)
          • Phormidesmis priestleyi (isolates:1; rSTs:1)
        • Romeriopsis (isolates:1; rSTs:1)
          • Romeriopsis navalis (isolates:1; rSTs:1)
        • Stenomitos (isolates:3; rSTs:2)
          • Stenomitos frigidus (isolates:3; rSTs:2)
      • Neosynechococcaceae (isolates:1; rSTs:1)
        • Neosynechococcus (isolates:1; rSTs:1)
          • Neosynechococcus sphagnicola (isolates:1; rSTs:1)
      • Trichocoleusaceae (isolates:7; rSTs:6 tree)
        • Trichocoleus (isolates:6; rSTs:5 tree)
          • Trichocoleus desertorum (isolates:3; rSTs:3 tree)
          • Trichocoleus sp. (isolates:3; rSTs:2 tree)
        • Trichothermofontia (isolates:1; rSTs:1)
          • Trichothermofontia sichuanensis (isolates:1; rSTs:1)
    • Nodosilineales (isolates:10; rSTs:9 tree)
      • Cymatolegaceae (isolates:3; rSTs:2)
        • Leptothoe (isolates:3; rSTs:2)
          • Leptothoe kymatousa (isolates:1)
          • Leptothoe sp. (isolates:1; rSTs:1)
          • Leptothoe spongobia (isolates:1; rSTs:1)
      • Nodosilineaceae (isolates:7; rSTs:7 tree)
        • Halomicronema (isolates:1; rSTs:1)
          • Halomicronema hongdechloris (isolates:1; rSTs:1)
        • Nodosilinea (isolates:5; rSTs:5 tree)
          • Nodosilinea nodulosa (isolates:1; rSTs:1)
          • Nodosilinea sp. (isolates:4; rSTs:4 tree)
        • Sphaerothrix (isolates:1; rSTs:1)
          • Sphaerothrix gracilis (isolates:1; rSTs:1)
    • Nostocales (isolates:317; rSTs:202 tree)
      • Aphanizomenonaceae (isolates:113; rSTs:67 tree)
        • Anabaenopsis (isolates:4; rSTs:3 tree)
          • Anabaenopsis arnoldii (isolates:2; rSTs:1)
          • Anabaenopsis elenkinii (isolates:1; rSTs:1)
          • Anabaenopsis sp. (isolates:1; rSTs:1)
        • Aphanizomenon (isolates:4; rSTs:3 tree)
          • Aphanizomenon flos-aquae (isolates:3; rSTs:2)
          • Aphanizomenon sp. (isolates:1; rSTs:1)
        • Chrysosporum (isolates:1)
          • Chrysosporum bergii (isolates:1)
        • Cuspidothrix (isolates:2; rSTs:1)
          • Cuspidothrix issatschenkoi (isolates:2; rSTs:1)
        • Cylindrospermopsis (isolates:22; rSTs:11 tree)
          • Cylindrospermopsis raciborskii (isolates:21; rSTs:10 tree)
          • Cylindrospermopsis sp. (isolates:1; rSTs:1)
        • Dolichospermum (isolates:18; rSTs:13 tree)
          • Dolichospermum circinale (isolates:12; rSTs:7 tree)
          • Dolichospermum compactum (isolates:1; rSTs:1)
          • Dolichospermum flos-aquae (isolates:1; rSTs:1)
          • Dolichospermum planctonicum (isolates:2; rSTs:2)
          • Dolichospermum sp. (isolates:2; rSTs:2)
        • Nodularia (isolates:39; rSTs:20 tree)
          • Nodularia harveyana (isolates:1; rSTs:1)
          • Nodularia sp. (isolates:7; rSTs:2)
          • Nodularia sphaerocarpa (isolates:2; rSTs:1)
          • Nodularia spumigena (isolates:29; rSTs:16 tree)
        • Okeanomitos (isolates:1; rSTs:1)
          • Okeanomitos corallinicola (isolates:1; rSTs:1)
        • Raphidiopsis (isolates:1; rSTs:1)
          • Raphidiopsis brookii (isolates:1; rSTs:1)
        • Sphaerospermopsis (isolates:9; rSTs:6 tree)
          • Sphaerospermopsis aphanizomenoides (isolates:1; rSTs:1)
          • Sphaerospermopsis kisseleviana (isolates:2; rSTs:1)
          • Sphaerospermopsis reniformis (isolates:1; rSTs:1)
          • Sphaerospermopsis sp. (isolates:4; rSTs:2)
          • Sphaerospermopsis torques-reginae (isolates:1; rSTs:1)
        • Umezakia (isolates:12; rSTs:8 tree)
          • Umezakia ovalisporum (isolates:12; rSTs:8 tree)
      • Calotrichaceae (isolates:23; rSTs:12 tree)
        • Calothrix (isolates:21; rSTs:11 tree)
          • Calothrix anomala (isolates:2; rSTs:1)
          • Calothrix brevissima (isolates:1; rSTs:1)
          • Calothrix elsteri (isolates:1; rSTs:1)
          • Calothrix parasitica (isolates:1; rSTs:1)
          • Calothrix rhizosoleniae (isolates:2; rSTs:1)
          • Calothrix sp. (isolates:14; rSTs:6 tree)
        • Dulcicalothrix (isolates:2; rSTs:1)
          • Dulcicalothrix desertica (isolates:2; rSTs:1)
      • Chlorogloeopsidaceae (isolates:5; rSTs:3 tree)
        • Chlorogloeopsis (isolates:5; rSTs:3 tree)
          • Chlorogloeopsis fritschii (isolates:3; rSTs:1)
          • Chlorogloeopsis sp. (isolates:2; rSTs:2)
      • Fortieaceae (isolates:2; rSTs:2)
        • Fortiea (isolates:1; rSTs:1)
          • Fortiea contorta (isolates:1; rSTs:1)
        • Roholtiella (isolates:1; rSTs:1)
          • aff. Roholtiella sp. (isolates:1; rSTs:1)
      • Hapalosiphonaceae (isolates:45; rSTs:32 tree)
        • Aetokthonos (isolates:1; rSTs:1)
          • Aetokthonos hydrillicola (isolates:1; rSTs:1)
        • Fischerella (isolates:41; rSTs:28 tree)
          • Fischerella major (isolates:1; rSTs:1)
          • Fischerella muscicola (isolates:4; rSTs:2)
          • Fischerella sp. (isolates:5; rSTs:3 tree)
          • Fischerella thermalis (isolates:31; rSTs:22 tree)
        • Hapalosiphon (isolates:1; rSTs:1)
          • Hapalosiphon sp. (isolates:1; rSTs:1)
        • Mastigocoleus (isolates:1; rSTs:1)
          • Mastigocoleus testarum (isolates:1; rSTs:1)
        • Westiellopsis (isolates:1; rSTs:1)
          • Westiellopsis prolifica (isolates:1; rSTs:1)
      • Nostocaceae (isolates:110; rSTs:71 tree)
        • Amazonocrinis (isolates:1; rSTs:1)
          • Amazonocrinis nigriterrae (isolates:1; rSTs:1)
        • Anabaena (isolates:18; rSTs:13 tree)
          • Anabaena azotica (isolates:1; rSTs:1)
          • Anabaena catenula (isolates:1; rSTs:1)
          • Anabaena cylindrica (isolates:4; rSTs:2)
          • Anabaena lutea (isolates:1; rSTs:1)
          • Anabaena minutissima (isolates:1; rSTs:1)
          • Anabaena sp. (isolates:8; rSTs:5 tree)
          • Anabaena sphaerica (isolates:1; rSTs:1)
          • Anabaena subtropica (isolates:1; rSTs:1)
        • Atlanticothrix (isolates:1; rSTs:1)
          • Atlanticothrix silvestris (isolates:1; rSTs:1)
        • Cylindrospermum (isolates:3; rSTs:3 tree)
          • Cylindrospermum sp. (isolates:2; rSTs:2)
          • Cylindrospermum stagnale (isolates:1; rSTs:1)
        • Dendronalium (isolates:2; rSTs:1)
          • Dendronalium phyllosphericum (isolates:2; rSTs:1)
        • Desmonostoc (isolates:1; rSTs:1)
          • Desmonostoc muscorum (isolates:1; rSTs:1)
        • Halotia (isolates:1; rSTs:1)
          • Halotia branconii (isolates:1; rSTs:1)
        • Komarekiella (isolates:1; rSTs:1)
          • Komarekiella delphini-convector (isolates:1; rSTs:1)
        • Nostoc (isolates:64; rSTs:43 tree)
          • Nostoc calcicola (isolates:2; rSTs:1)
          • Nostoc commune (isolates:2; rSTs:1)
          • Nostoc cycadae (isolates:1; rSTs:1)
          • Nostoc edaphicum (isolates:2; rSTs:1)
          • Nostoc favosum (isolates:1; rSTs:1)
          • Nostoc flagelliforme (isolates:2; rSTs:1)
          • Nostoc foliaceum (isolates:1; rSTs:1)
          • Nostoc linckia (isolates:13; rSTs:1)
          • Nostoc mirabile (isolates:1; rSTs:1)
          • Nostoc paludosum (isolates:1; rSTs:1)
          • Nostoc piscinale (isolates:1; rSTs:1)
          • Nostoc punctiforme (isolates:2; rSTs:2)
          • Nostoc sp. (isolates:31; rSTs:27 tree)
          • Nostoc sphaeroides (isolates:3; rSTs:2)
          • Nostoc spongiaeforme (isolates:1; rSTs:1)
        • Richelia (isolates:4; rSTs:2)
          • Richelia intracellularis (isolates:2; rSTs:1)
          • Richelia sinica (isolates:2; rSTs:1)
        • Trichormus (isolates:14; rSTs:4 tree)
          • Trichormus azollae (isolates:2; rSTs:2)
          • Trichormus variabilis (isolates:12; rSTs:2)
      • Rivulariaceae (isolates:1; rSTs:1)
        • Rivularia (isolates:1; rSTs:1)
          • Rivularia sp. (isolates:1; rSTs:1)
      • Scytonemataceae (isolates:14; rSTs:10 tree)
        • Brasilonema (isolates:8; rSTs:4 tree)
          • Brasilonema bromeliae (isolates:2; rSTs:1)
          • Brasilonema octagenarum (isolates:1; rSTs:1)
          • Brasilonema sennae (isolates:2; rSTs:1)
          • Brasilonema sp. (isolates:3; rSTs:1)
        • Iningainema (isolates:2; rSTs:1)
          • Iningainema tapete (isolates:2; rSTs:1)
        • Scytonema (isolates:4; rSTs:5 tree)
          • Scytonema hofmannii (isolates:1; rSTs:1)
          • Scytonema millei (isolates:1; rSTs:1)
          • Scytonema sp. (isolates:1; rSTs:1)
          • Scytonema tolypothrichoides (isolates:1; rSTs:2)
      • Symphyonemataceae (isolates:1; rSTs:1)
        • Mastigocladopsis (isolates:1; rSTs:1)
          • Mastigocladopsis repens (isolates:1; rSTs:1)
      • Tolypothrichaceae (isolates:3; rSTs:3 tree)
        • Hassalia (isolates:1; rSTs:1)
          • Hassalia byssoidea (isolates:1; rSTs:1)
        • Tolypothrix (isolates:2; rSTs:2 tree)
          • Tolypothrix bouteillei (isolates:1; rSTs:1)
          • [Scytonema hofmanni] UTEX B 1581 (isolates:1; rSTs:1)
    • Oculatellales (isolates:6; rSTs:5 tree)
      • Oculatellaceae (isolates:6; rSTs:5 tree)
        • Elainella (isolates:1; rSTs:1)
          • Elainella saxicola (isolates:1; rSTs:1)
        • Oculatella (isolates:1; rSTs:1)
          • Oculatella sp. (isolates:1; rSTs:1)
        • Thermocoleostomius (isolates:1; rSTs:1)
          • Thermocoleostomius sinensis (isolates:1; rSTs:1)
        • Thermoleptolyngbya (isolates:3; rSTs:2)
          • Thermoleptolyngbya sichuanensis (isolates:2; rSTs:1)
          • Thermoleptolyngbya sp. (isolates:1; rSTs:1)
    • Oscillatoriales (isolates:162; rSTs:98 tree)
      • Aerosakkonemataceae (isolates:2; rSTs:1)
        • Aerosakkonema (isolates:1)
          • Aerosakkonema funiforme (isolates:1)
        • Microseira (isolates:1; rSTs:1)
          • Microseira wollei (isolates:1; rSTs:1)
      • Laspinemataceae (isolates:5; rSTs:5 tree)
        • Laspinema (isolates:5; rSTs:5 tree)
          • Laspinema olomoucense (isolates:4; rSTs:4 tree)
          • Laspinema sp. (isolates:1; rSTs:1 tree)
      • Microcoleaceae (isolates:118; rSTs:69 tree)
        • Arthrospira (isolates:4; rSTs:4 tree)
          • Arthrospira platensis (isolates:3; rSTs:3 tree)
          • Arthrospira sp. (isolates:1; rSTs:1)
        • Hydrocoleum (isolates:1)
          • Hydrocoleum sp. (isolates:1)
        • Kamptonema (isolates:4; rSTs:3 tree)
          • Kamptonema animale (isolates:1)
          • Kamptonema formosum (isolates:1; rSTs:1)
          • Kamptonema sp. (isolates:2; rSTs:2)
        • Lyngbya (isolates:2; rSTs:2)
          • Lyngbya aestuarii (isolates:1; rSTs:1)
          • Lyngbya sp. (isolates:1; rSTs:1)
        • Microcoleus (isolates:48; rSTs:18 tree)
          • Microcoleus asticus (isolates:2; rSTs:1)
          • Microcoleus sp. (isolates:43; rSTs:15 tree)
          • Microcoleus vaginatus (isolates:3; rSTs:2)
        • Okeania (isolates:5; rSTs:2)
          • Okeania hirsuta (isolates:4; rSTs:2)
          • Okeania sp. (isolates:1)
        • Planktothrix (isolates:44; rSTs:35 tree)
          • Planktothrix agardhii (isolates:31; rSTs:20 tree)
          • Planktothrix mougeotii (isolates:1; rSTs:1)
          • Planktothrix paucivesiculata (isolates:1; rSTs:1)
          • Planktothrix prolifica (isolates:2; rSTs:1)
          • Planktothrix pseudagardhii (isolates:1; rSTs:1)
          • Planktothrix rubescens (isolates:2; rSTs:2)
          • Planktothrix serta (isolates:1; rSTs:1)
          • Planktothrix sp. (isolates:3; rSTs:7 tree)
          • Planktothrix tepida (isolates:2; rSTs:1)
        • Plectonema (isolates:1; rSTs:1)
          • Plectonema radiosum (isolates:1; rSTs:1)
        • Sodalinema (isolates:1; rSTs:1)
          • Sodalinema gerasimenkoae (isolates:1; rSTs:1)
        • Trichodesmium (isolates:2; rSTs:1)
          • Trichodesmium erythraeum (isolates:1; rSTs:1)
          • Trichodesmium thiebautii (isolates:1)
        • Tychonema (isolates:3; rSTs:2)
          • Tychonema bourrellyi (isolates:1; rSTs:1)
          • Tychonema sp. (isolates:2; rSTs:1)
      • Oscillatoriaceae (isolates:27; rSTs:18 tree)
        • Argonema (isolates:3; rSTs:2)
          • Argonema antarcticum (isolates:2; rSTs:1)
          • Argonema galeatum (isolates:1; rSTs:1)
        • Baaleninema (isolates:1)
          • Baaleninema simplex (isolates:1)
        • Moorena (isolates:4; rSTs:2)
          • Moorena bouillonii (isolates:1; rSTs:1)
          • Moorena producens (isolates:3; rSTs:1)
        • Oscillatoria (isolates:4; rSTs:3 tree)
          • Oscillatoria acuminata (isolates:1; rSTs:1)
          • Oscillatoria nigro-viridis (isolates:2; rSTs:1)
          • Oscillatoria sp. (isolates:1; rSTs:1)
        • Oxynema (isolates:2; rSTs:2)
          • Oxynema aestuarii (isolates:1; rSTs:1)
          • Oxynema sp. (isolates:1; rSTs:1)
        • Phormidium (isolates:9; rSTs:6 tree)
          • Phormidium ambiguum (isolates:1; rSTs:1)
          • Phormidium lacuna (isolates:1; rSTs:1)
          • Phormidium sp. (isolates:4; rSTs:2)
          • Phormidium tenue (isolates:2; rSTs:1)
          • Phormidium yuhuli (isolates:1; rSTs:1)
        • Planktothricoides (isolates:4; rSTs:3)
          • Planktothricoides raciborskii (isolates:3; rSTs:2)
          • Planktothricoides sp. (isolates:1; rSTs:1)
      • Sirenicapillariaceae (isolates:9; rSTs:5 tree)
        • Limnoraphis (isolates:5; rSTs:3 tree)
          • Limnoraphis robusta (isolates:5; rSTs:3 tree)
        • Limnospira (isolates:4; rSTs:2)
          • Limnospira fusiformis (isolates:1; rSTs:1)
          • Limnospira indica (isolates:2; rSTs:1)
          • Limnospira maxima (isolates:1)
    • Pleurocapsales (isolates:8; rSTs:7 tree)
      • Dermocarpellaceae (isolates:2; rSTs:2)
        • Stanieria (isolates:2; rSTs:2)
          • Stanieria cyanosphaera (isolates:1; rSTs:1)
          • Stanieria sp. (isolates:1; rSTs:1)
      • Hydrococcaceae (isolates:1; rSTs:1)
        • Hydrococcus (isolates:1; rSTs:1)
          • Hydrococcus rivularis (isolates:1; rSTs:1)
      • Hyellaceae (isolates:4; rSTs:3 tree)
        • Hyella (isolates:1; rSTs:1)
          • Hyella patelloides (isolates:1; rSTs:1)
        • Myxosarcina (isolates:1; rSTs:1)
          • Myxosarcina sp. (isolates:1; rSTs:1)
        • Pleurocapsa (isolates:1)
          • Pleurocapsa sp. (isolates:1)
        • Waterburya (isolates:1; rSTs:1)
          • Waterburya agarophytonicola (isolates:1; rSTs:1)
      • Xenococcaceae (isolates:1; rSTs:1)
        • Xenococcus (isolates:1; rSTs:1)
          • Xenococcus sp. (isolates:1; rSTs:1)
    • Prochlorotrichales (isolates:1; rSTs:1)
      • Prochlorotrichaceae (isolates:1; rSTs:1)
        • Prochlorothrix (isolates:1; rSTs:1)
          • Prochlorothrix hollandica (isolates:1; rSTs:1)
    • Pseudanabaenales (isolates:19; rSTs:18 tree)
      • Pseudanabaenaceae (isolates:18; rSTs:17 tree)
        • Pseudanabaena (isolates:18; rSTs:17 tree)
          • Pseudanabaena biceps (isolates:2; rSTs:1)
          • Pseudanabaena cinerea (isolates:1; rSTs:1)
          • Pseudanabaena galeata (isolates:2; rSTs:2)
          • Pseudanabaena mucicola (isolates:1; rSTs:1)
          • Pseudanabaena sp. (isolates:11; rSTs:11 tree)
          • Pseudanabaena yagii (isolates:1; rSTs:1)
      • Romeriaceae (isolates:1; rSTs:1)
        • Romeria (isolates:1; rSTs:1)
          • Romeria gracilis (isolates:1; rSTs:1)
    • Spirulinales (isolates:6; rSTs:5 tree)
      • Lusitaniellaceae (isolates:1; rSTs:1)
        • Lusitaniella (isolates:1; rSTs:1)
          • Lusitaniella coriacea (isolates:1; rSTs:1)
      • Spirulinaceae (isolates:5; rSTs:4 tree)
        • Spirulina (isolates:5; rSTs:4 tree)
          • Spirulina major (isolates:2; rSTs:1)
          • Spirulina sp. (isolates:1; rSTs:1)
          • Spirulina subsalsa (isolates:2; rSTs:2)
    • Synechococcales (isolates:172; rSTs:98 tree)
      • Merismopediaceae (isolates:29; rSTs:11 tree)
        • Aphanocapsa (isolates:1; rSTs:1)
          • Aphanocapsa montana (isolates:1; rSTs:1)
        • Merismopedia (isolates:2; rSTs:1)
          • Merismopedia glauca (isolates:2; rSTs:1)
        • Synechocystis (isolates:26; rSTs:9 tree)
          • Synechocystis salina (isolates:3; rSTs:2)
          • Synechocystis sp. (isolates:23; rSTs:7 tree)
      • Petrachlorosaceae (isolates:1; rSTs:1)
        • Petrachloros (isolates:1; rSTs:1)
          • Petrachloros mirabilis (isolates:1; rSTs:1)
      • Prochloraceae (isolates:3; rSTs:3 tree)
        • Prochloron (isolates:3; rSTs:3 tree)
          • Prochloron didemni (isolates:3; rSTs:3 tree)
      • Prochlorococcaceae (isolates:94; rSTs:64 tree)
        • Cyanobium (isolates:33; rSTs:23 tree)
          • Cyanobium gracile (isolates:1; rSTs:1)
          • Cyanobium sp. (isolates:30; rSTs:20 tree)
          • Cyanobium usitatum (isolates:2; rSTs:2)
        • Parasynechococcus (isolates:1; rSTs:1)
          • Parasynechococcus marenigrum (isolates:1; rSTs:1)
        • Prochlorococcus (isolates:60; rSTs:40 tree)
          • Prochlorococcus marinus (isolates:52; rSTs:33 tree)
          • Prochlorococcus sp. (isolates:8; rSTs:7 tree)
      • Synechococcaceae (isolates:44; rSTs:18 tree)
        • Dactylococcopsis (isolates:1; rSTs:1)
          • Dactylococcopsis salina (isolates:1; rSTs:1)
        • Synechococcus (isolates:39; rSTs:16 tree)
          • Candidatus Synechococcus spongiarum (isolates:6; rSTs:2)
          • Synechococcus elongatus (isolates:25; rSTs:9 tree)
          • Synechococcus lacustris (isolates:7; rSTs:4 tree)
          • Synechococcus sp. (isolates:1; rSTs:1)
        • Vulcanococcus (isolates:4; rSTs:1)
          • Vulcanococcus limneticus (isolates:4; rSTs:1)
    • Thermostichales (isolates:1; rSTs:1)
      • Thermostichaceae (isolates:1; rSTs:1)
        • Thermostichus (isolates:1; rSTs:1)
          • Thermostichus lividus (isolates:1; rSTs:1)
• Deferribacterota (isolates:18; rSTs:14 tree)
  • Deferribacteres (isolates:18; rSTs:14 tree)
    • Deferribacterales (isolates:18; rSTs:14 tree)
      • Calditerrivibrionaceae (isolates:1; rSTs:1)
        • Calditerrivibrio (isolates:1; rSTs:1)
          • Calditerrivibrio nitroreducens (isolates:1; rSTs:1)
      • Deferribacteraceae (isolates:2; rSTs:2)
        • Deferribacter (isolates:2; rSTs:2)
          • Deferribacter autotrophicus (isolates:1; rSTs:1)
          • Deferribacter desulfuricans (isolates:1; rSTs:1)
      • Deferrivibrionaceae (isolates:1; rSTs:1)
        • Deferrivibrio (isolates:1; rSTs:1)
          • Deferrivibrio essentukiensis (isolates:1; rSTs:1)
      • Flexistipitaceae (isolates:2; rSTs:1)
        • Flexistipes (isolates:2; rSTs:1)
          • Flexistipes sinusarabici (isolates:2; rSTs:1)
      • Geovibrionaceae (isolates:7; rSTs:5 tree)
        • Denitrovibrio (isolates:2; rSTs:1)
          • Denitrovibrio acetiphilus (isolates:2; rSTs:1)
        • Geovibrio (isolates:2; rSTs:2)
          • Geovibrio ferrireducens (isolates:1; rSTs:1)
          • Geovibrio thiophilus (isolates:1; rSTs:1)
        • Limisalsivibrio (isolates:1; rSTs:1)
          • Limisalsivibrio acetivorans (isolates:1; rSTs:1)
        • Seleniivibrio (isolates:2; rSTs:1)
          • Seleniivibrio woodruffii (isolates:2; rSTs:1)
      • Mucispirillaceae (isolates:5; rSTs:4 tree)
        • Mucispirillum (isolates:5; rSTs:4 tree)
          • Mucispirillum schaedleri (isolates:5; rSTs:4 tree)
• Deinococcota (isolates:304; rSTs:207 tree)
  • Deinococci (isolates:304; rSTs:207 tree)
    • Deinococcales (isolates:158; rSTs:106 tree)
      • Deinococcaceae (isolates:158; rSTs:106 tree)
        • Deinobacterium (isolates:1; rSTs:1)
          • Deinobacterium chartae (isolates:1; rSTs:1)
        • Deinococcus (isolates:157; rSTs:105 tree)
          • Deinococcus actinosclerus (isolates:1; rSTs:1)
          • Deinococcus aerius (isolates:1; rSTs:1)
          • Deinococcus aerolatus (isolates:1; rSTs:1)
          • Deinococcus aerophilus (isolates:1; rSTs:1)
          • Deinococcus aestuarii (isolates:1; rSTs:1)
          • Deinococcus aetherius (isolates:2; rSTs:1)
          • Deinococcus alpinitundrae (isolates:1; rSTs:1)
          • Deinococcus aluminii (isolates:1; rSTs:1)
          • Deinococcus apachensis (isolates:1; rSTs:1)
          • Deinococcus aquaedulcis (isolates:1; rSTs:1)
          • Deinococcus aquaticus (isolates:2; rSTs:1)
          • Deinococcus aquatilis (isolates:1; rSTs:1)
          • Deinococcus aquiradiocola (isolates:1; rSTs:1)
          • Deinococcus arboris (isolates:1; rSTs:1)
          • Deinococcus arcticus (isolates:1; rSTs:1)
          • Deinococcus arenae (isolates:1; rSTs:1)
          • Deinococcus arenicola (isolates:1; rSTs:1)
          • Deinococcus betulae (isolates:1; rSTs:1)
          • Deinococcus budaensis (isolates:1; rSTs:1)
          • Deinococcus caeni (isolates:1; rSTs:1)
          • Deinococcus carri (isolates:1; rSTs:1)
          • Deinococcus cavernae (isolates:1; rSTs:1)
          • Deinococcus cellulosilyticus (isolates:1; rSTs:1)
          • Deinococcus daejeonensis (isolates:1; rSTs:1)
          • Deinococcus depolymerans (isolates:2; rSTs:1)
          • Deinococcus deserti (isolates:1; rSTs:1)
          • Deinococcus detaillensis (isolates:1; rSTs:1)
          • Deinococcus ficus (isolates:4; rSTs:3 tree)
          • Deinococcus fonticola (isolates:1; rSTs:1)
          • Deinococcus frigens (isolates:1; rSTs:1)
          • Deinococcus geothermalis (isolates:1; rSTs:1)
          • Deinococcus gobiensis (isolates:1; rSTs:1)
          • Deinococcus grandis (isolates:2; rSTs:1)
          • Deinococcus hopiensis (isolates:1; rSTs:1)
          • Deinococcus humi (isolates:2; rSTs:1)
          • Deinococcus indicus (isolates:2; rSTs:2)
          • Deinococcus irradiatisoli (isolates:1; rSTs:1)
          • Deinococcus knuensis (isolates:1; rSTs:1)
          • Deinococcus koreensis (isolates:1; rSTs:1)
          • Deinococcus kurensis (isolates:1; rSTs:1)
          • Deinococcus malanensis (isolates:1; rSTs:1)
          • Deinococcus maricopensis (isolates:3; rSTs:1)
          • Deinococcus marmoris (isolates:2; rSTs:2)
          • Deinococcus metalli (isolates:2; rSTs:1)
          • Deinococcus metallilatus (isolates:4; rSTs:1)
          • Deinococcus misasensis (isolates:1; rSTs:1)
          • Deinococcus multiflagellatus (isolates:1; rSTs:1)
          • Deinococcus murrayi (isolates:1; rSTs:1)
          • Deinococcus peraridilitoris (isolates:1; rSTs:1)
          • Deinococcus phoenicis (isolates:1; rSTs:1)
          • Deinococcus pimensis (isolates:1; rSTs:1)
          • Deinococcus piscis (isolates:1; rSTs:1)
          • Deinococcus planocerae (isolates:1; rSTs:1)
          • Deinococcus proteolyticus (isolates:1; rSTs:1)
          • Deinococcus psychrotolerans (isolates:1; rSTs:1)
          • Deinococcus puniceus (isolates:1; rSTs:1)
          • Deinococcus radiodurans (isolates:15; rSTs:2)
          • Deinococcus radiophilus (isolates:2; rSTs:2)
          • Deinococcus radiopugnans (isolates:3; rSTs:2)
          • Deinococcus radiotolerans (isolates:1; rSTs:1)
          • Deinococcus reticulitermitis (isolates:1; rSTs:1)
          • Deinococcus rhizophilus (isolates:1)
          • Deinococcus roseus (isolates:1; rSTs:1)
          • Deinococcus rubellus (isolates:2; rSTs:1)
          • Deinococcus ruber (isolates:1; rSTs:1)
          • Deinococcus sedimenti (isolates:1; rSTs:1)
          • Deinococcus seoulensis (isolates:1; rSTs:1)
          • Deinococcus soli (isolates:1; rSTs:1)
          • Deinococcus soli (ex Cha et al. 2016) (isolates:1; rSTs:1)
          • Deinococcus sonorensis (isolates:1)
          • Deinococcus sp. (isolates:29; rSTs:21 tree)
          • Deinococcus taeanensis (isolates:1; rSTs:1)
          • Deinococcus terrestris (isolates:1; rSTs:1)
          • Deinococcus wulumuqiensis (isolates:19; rSTs:4 tree)
          • Deinococcus xianganensis (isolates:1; rSTs:1)
          • Deinococcus xinjiangensis (isolates:1; rSTs:1)
          • Deinococcus yavapaiensis (isolates:1; rSTs:1)
    • Thermales (isolates:144; rSTs:100 tree)
      • Thermaceae (isolates:144; rSTs:100 tree)
        • Allomeiothermus (isolates:1; rSTs:1)
          • Allomeiothermus silvanus (isolates:1; rSTs:1)
        • Calidithermus (isolates:4; rSTs:4 tree)
          • Calidithermus chliarophilus (isolates:1; rSTs:1)
          • Calidithermus roseus (isolates:1; rSTs:1)
          • Calidithermus terrae (isolates:1; rSTs:1)
          • Calidithermus timidus (isolates:1; rSTs:1)
        • Marinithermus (isolates:1; rSTs:1)
          • Marinithermus hydrothermalis (isolates:1; rSTs:1)
        • Meiothermus (isolates:17; rSTs:14 tree)
          • Meiothermus cerbereus (isolates:1; rSTs:1)
          • Meiothermus granaticius (isolates:2; rSTs:1)
          • Meiothermus hypogaeus (isolates:2; rSTs:1)
          • Meiothermus luteus (isolates:1; rSTs:1)
          • Meiothermus ruber (isolates:4; rSTs:3 tree)
          • Meiothermus rufus (isolates:1; rSTs:1)
          • Meiothermus sp. (isolates:2; rSTs:2 tree)
          • Meiothermus taiwanensis (isolates:4; rSTs:4 tree)
        • Oceanithermus (isolates:4; rSTs:2)
          • Oceanithermus desulfurans (isolates:2; rSTs:1)
          • Oceanithermus profundus (isolates:2; rSTs:1)
        • Thermus (isolates:117; rSTs:78 tree)
          • Thermus albus (isolates:1; rSTs:1)
          • Thermus altitudinis (isolates:1; rSTs:1)
          • Thermus amyloliquefaciens (isolates:1; rSTs:1)
          • Thermus antranikianii (isolates:2; rSTs:1)
          • Thermus aquaticus (isolates:3; rSTs:2)
          • Thermus arciformis (isolates:2; rSTs:1)
          • Thermus brevis (isolates:1; rSTs:1)
          • Thermus brockianus (isolates:2; rSTs:2 tree)
          • Thermus caldifontis (isolates:1; rSTs:1)
          • Thermus caldilimi (isolates:1; rSTs:1)
          • Thermus caliditerrae (isolates:2; rSTs:2)
          • Thermus composti (isolates:1; rSTs:1)
          • Thermus filiformis (isolates:1; rSTs:1)
          • Thermus hydrothermalis (isolates:1; rSTs:1)
          • Thermus igniterrae (isolates:1; rSTs:1)
          • Thermus islandicus (isolates:1; rSTs:1)
          • Thermus kawarayensis (isolates:1; rSTs:1)
          • Thermus neutrinimicus (isolates:1; rSTs:1)
          • Thermus oshimai (isolates:2; rSTs:2)
          • Thermus parvatiensis (isolates:1; rSTs:1)
          • Thermus scotoductus (isolates:40; rSTs:17 tree)
          • Thermus sediminis (isolates:1; rSTs:1)
          • Thermus sp. (isolates:7; rSTs:7 tree)
          • Thermus tengchongensis (isolates:4; rSTs:4 tree)
          • Thermus tenuipuniceus (isolates:1; rSTs:1)
          • Thermus thalpophilus (isolates:1; rSTs:1)
          • Thermus thermamylovorans (isolates:1; rSTs:1)
          • Thermus thermophilus (isolates:35; rSTs:22 tree)
    • Trueperales (isolates:2; rSTs:1)
      • Trueperaceae (isolates:2; rSTs:1)
        • Truepera (isolates:2; rSTs:1)
          • Truepera radiovictrix (isolates:2; rSTs:1)
• Dictyoglomota (isolates:4; rSTs:4 tree)
  • Dictyoglomia (isolates:4; rSTs:4 tree)
    • Dictyoglomales (isolates:4; rSTs:4 tree)
      • Dictyoglomaceae (isolates:4; rSTs:4 tree)
        • Dictyoglomus (isolates:4; rSTs:4 tree)
          • Dictyoglomus sp. (isolates:1; rSTs:1)
          • Dictyoglomus thermophilum (isolates:2; rSTs:2)
          • Dictyoglomus turgidum (isolates:1; rSTs:1)
• Elusimicrobiota (isolates:5; rSTs:3 tree)
  • Elusimicrobia (isolates:1; rSTs:1)
    • Elusimicrobiales (isolates:1; rSTs:1)
      • Elusimicrobiaceae (isolates:1; rSTs:1)
        • Elusimicrobium (isolates:1; rSTs:1)
          • Elusimicrobium minutum (isolates:1; rSTs:1)
  • Endomicrobiia (isolates:4; rSTs:2)
    • Endomicrobiales (isolates:4; rSTs:2)
      • Endomicrobiaceae (isolates:4; rSTs:2)
        • Endomicrobium (isolates:4; rSTs:2)
          • Candidatus Endomicrobium trichonymphae (isolates:3; rSTs:1)
          • Endomicrobium proavitum (isolates:1; rSTs:1)
• Fibrobacterota (isolates:46; rSTs:41 tree)
  • Chitinispirillia (isolates:1; rSTs:1)
    • Chitinispirillales (isolates:1; rSTs:1)
      • Chitinispirillaceae (isolates:1; rSTs:1)
        • Chitinispirillum (isolates:1; rSTs:1)
          • Chitinispirillum alkaliphilum (isolates:1; rSTs:1)
  • Chitinivibrionia (isolates:1; rSTs:1)
    • Chitinivibrionales (isolates:1; rSTs:1)
      • Chitinivibrionaceae (isolates:1; rSTs:1)
        • Chitinivibrio (isolates:1; rSTs:1)
          • Chitinivibrio alkaliphilus (isolates:1; rSTs:1)
  • Fibrobacteria (isolates:44; rSTs:39 tree)
    • Candidatus Fibrimonadales (isolates:1; rSTs:1)
      • Candidatus Fibrimonadaceae (isolates:1; rSTs:1)
        • Candidatus Fibrimonas (isolates:1; rSTs:1)
          • Candidatus Fibrimonas termitidis (isolates:1; rSTs:1)
    • Fibrobacterales (isolates:43; rSTs:38 tree)
      • Fibrobacteraceae (isolates:43; rSTs:38 tree)
        • Fibrobacter (isolates:41; rSTs:36 tree)
          • Fibrobacter intestinalis (isolates:2; rSTs:2)
          • Fibrobacter sp. (isolates:33; rSTs:30 tree)
          • Fibrobacter succinogenes (isolates:6; rSTs:4 tree)
        • Hallerella (isolates:2; rSTs:2)
          • Hallerella porci (isolates:1; rSTs:1)
          • Hallerella succinigenes (isolates:1; rSTs:1)
• Fusobacteriota (isolates:510; rSTs:349 tree)
  • Fusobacteriia (isolates:510; rSTs:349 tree)
    • Fusobacteriales (isolates:510; rSTs:349 tree)
      • Fusobacteriaceae (isolates:430; rSTs:280 tree)
        • Cetobacterium (isolates:14; rSTs:12 tree)
          • Candidatus Cetobacterium colombiensis (isolates:1; rSTs:1)
          • Cetobacterium ceti (isolates:1; rSTs:1)
          • Cetobacterium somerae (isolates:6; rSTs:5 tree)
          • Cetobacterium sp. (isolates:6; rSTs:5 tree)
        • Fusobacterium (isolates:409; rSTs:265 tree)
          • Fusobacterium animalis (isolates:57; rSTs:45 tree)
          • Fusobacterium canifelinum (isolates:4; rSTs:4 tree)
          • Fusobacterium gastrosuis (isolates:1; rSTs:1)
          • Fusobacterium gonidiaformans (isolates:4; rSTs:2)
          • Fusobacterium hominis (isolates:2; rSTs:2)
          • Fusobacterium hwasookii (isolates:11; rSTs:7 tree)
          • Fusobacterium massiliense (isolates:2; rSTs:1)
          • Fusobacterium mortiferum (isolates:13; rSTs:10 tree)
          • Fusobacterium necrogenes (isolates:1; rSTs:1)
          • Fusobacterium necrophorum (isolates:75; rSTs:34 tree)
          • Fusobacterium nucleatum (isolates:31; rSTs:18 tree)
          • Fusobacterium perfoetens (isolates:3; rSTs:3 tree)
          • Fusobacterium periodonticum (isolates:1; rSTs:1)
          • Fusobacterium polymorphum (isolates:104; rSTs:52 tree)
          • Fusobacterium pseudoperiodonticum (isolates:13; rSTs:11 tree)
          • Fusobacterium russii (isolates:1; rSTs:1)
          • Fusobacterium simiae (isolates:2; rSTs:1)
          • Fusobacterium sp. (isolates:36; rSTs:39 tree)
          • Fusobacterium ulcerans (isolates:14; rSTs:7 tree)
          • Fusobacterium varium (isolates:15; rSTs:11 tree)
          • Fusobacterium vincentii (isolates:19; rSTs:14 tree)
        • Ilyobacter (isolates:1; rSTs:1)
          • Ilyobacter polytropus (isolates:1; rSTs:1)
        • Propionigenium (isolates:1)
          • Propionigenium maris (isolates:1)
        • Psychrilyobacter (isolates:5; rSTs:2)
          • Psychrilyobacter atlanticus (isolates:1; rSTs:1)
          • Psychrilyobacter piezotolerans (isolates:2; rSTs:1)
          • Psychrilyobacter sp. (isolates:2)
      • Haliovirgaceae (isolates:1; rSTs:1)
        • Haliovirga (isolates:1; rSTs:1)
          • Haliovirga abyssi (isolates:1; rSTs:1)
      • Leptotrichiaceae (isolates:79; rSTs:68 tree)
        • Caviibacter (isolates:2; rSTs:2)
          • Caviibacter abscessus (isolates:2; rSTs:2)
        • Leptotrichia (isolates:30; rSTs:26 tree)
          • Leptotrichia buccalis (isolates:1; rSTs:1)
          • Leptotrichia hofstadii (isolates:3; rSTs:2)
          • Leptotrichia hongkongensis (isolates:1; rSTs:1)
          • Leptotrichia massiliensis (isolates:1; rSTs:1)
          • Leptotrichia shahii (isolates:2; rSTs:1)
          • Leptotrichia sp. (isolates:11; rSTs:10 tree)
          • Leptotrichia trevisanii (isolates:4; rSTs:4 tree)
          • Leptotrichia wadei (isolates:7; rSTs:6 tree)
        • Oceanivirga (isolates:2; rSTs:2)
          • Oceanivirga miroungae (isolates:1; rSTs:1)
          • Oceanivirga salmonicida (isolates:1; rSTs:1)
        • Pseudoleptotrichia (isolates:5; rSTs:2)
          • Pseudoleptotrichia goodfellowii (isolates:5; rSTs:2)
        • Pseudostreptobacillus (isolates:1; rSTs:1)
          • Pseudostreptobacillus hongkongensis (isolates:1; rSTs:1)
        • Sebaldella (isolates:3; rSTs:2)
          • Sebaldella sp. (isolates:1; rSTs:1)
          • Sebaldella termitidis (isolates:2; rSTs:1)
        • Sneathia (isolates:5; rSTs:4 tree)
          • Sneathia sanguinegens (isolates:2; rSTs:2)
          • Sneathia sp. (isolates:1)
          • Sneathia vaginalis (isolates:2; rSTs:2)
        • Streptobacillus (isolates:31; rSTs:29 tree)
          • Streptobacillus canis (isolates:1; rSTs:1)
          • Streptobacillus felis (isolates:2; rSTs:2)
          • Streptobacillus moniliformis (isolates:25; rSTs:23 tree)
          • Streptobacillus notomytis (isolates:2; rSTs:2)
          • Streptobacillus ratti (isolates:1; rSTs:1)
• Gemmatimonadota (isolates:11; rSTs:7 tree)
  • Gemmatimonadia (isolates:8; rSTs:6 tree)
    • Gemmatimonadales (isolates:8; rSTs:6 tree)
      • Gemmatimonadaceae (isolates:8; rSTs:6 tree)
        • Gemmatimonas (isolates:3; rSTs:3 tree)
          • Gemmatimonas aurantiaca (isolates:1; rSTs:1)
          • Gemmatimonas groenlandica (isolates:1; rSTs:1)
          • Gemmatimonas phototrophica (isolates:1; rSTs:1)
        • Gemmatirosa (isolates:1; rSTs:1)
          • Gemmatirosa kalamazoonensis (isolates:1; rSTs:1)
        • Pseudogemmatithrix (isolates:2; rSTs:1)
          • Pseudogemmatithrix spongiicola (isolates:2; rSTs:1)
        • Roseisolibacter (isolates:2; rSTs:1)
          • Roseisolibacter agri (isolates:1; rSTs:1)
          • Roseisolibacter sp. (isolates:1)
  • Longimicrobiia (isolates:3; rSTs:1)
    • Longimicrobiales (isolates:3; rSTs:1)
      • Longimicrobiaceae (isolates:3; rSTs:1)
        • Longimicrobium (isolates:3; rSTs:1)
          • Longimicrobium terrae (isolates:3; rSTs:1)
• Ignavibacteriota (isolates:5; rSTs:5 tree)
  • Ignavibacteria (isolates:5; rSTs:5 tree)
    • Ignavibacteriales (isolates:5; rSTs:5 tree)
      • Ignavibacteriaceae (isolates:1; rSTs:1)
        • Ignavibacterium (isolates:1; rSTs:1)
          • Ignavibacterium album (isolates:1; rSTs:1)
      • Melioribacteraceae (isolates:4; rSTs:4 tree)
        • Melioribacter (isolates:1; rSTs:1)
          • Melioribacter roseus (isolates:1; rSTs:1)
        • Rosettibacter (isolates:2; rSTs:2)
          • Rosettibacter firmus (isolates:1; rSTs:1)
          • Rosettibacter primus (isolates:1; rSTs:1)
        • Stygiobacter (isolates:1; rSTs:1)
          • Stygiobacter electus (isolates:1; rSTs:1)
• Kiritimatiellota (isolates:5; rSTs:4 tree)
  • Kiritimatiellia (isolates:4; rSTs:4 tree)
    • Kiritimatiellales (isolates:4; rSTs:4 tree)
      • Kiritimatiellaceae (isolates:1; rSTs:1)
        • Kiritimatiella (isolates:1; rSTs:1)
          • Kiritimatiella glycovorans (isolates:1; rSTs:1)
      • Pontiellaceae (isolates:3; rSTs:3 tree)
        • Pontiella (isolates:3; rSTs:3 tree)
          • Pontiella agarivorans (isolates:1; rSTs:1)
          • Pontiella desulfatans (isolates:1; rSTs:1)
          • Pontiella sulfatireligans (isolates:1; rSTs:1)
  • Tichowtungiia (isolates:1)
    • Tichowtungiales (isolates:1)
      • Tichowtungiaceae (isolates:1)
        • Tichowtungia (isolates:1)
          • Tichowtungia aerotolerans (isolates:1)
• Lentisphaerota (isolates:9; rSTs:6 tree)
  • Lentisphaeria (isolates:8; rSTs:6 tree)
    • Lentisphaerales (isolates:3; rSTs:2)
      • Lentisphaeraceae (isolates:3; rSTs:2)
        • Lentisphaera (isolates:3; rSTs:2)
          • Lentisphaera araneosa (isolates:1)
          • Lentisphaera marina (isolates:1; rSTs:1)
          • Lentisphaera profundi (isolates:1; rSTs:1)
    • Victivallales (isolates:5; rSTs:4 tree)
      • Victivallaceae (isolates:5; rSTs:4 tree)
        • Victivallis (isolates:5; rSTs:4 tree)
          • Victivallis lenta (isolates:1; rSTs:1)
          • Victivallis sp. (isolates:1; rSTs:2)
          • Victivallis vadensis (isolates:3; rSTs:1)
  • Oligosphaeria (isolates:1)
    • Oligosphaerales (isolates:1)
      • Oligosphaeraceae (isolates:1)
        • Oligosphaera (isolates:1)
          • Oligosphaera ethanolica (isolates:1)
• Mycoplasmatota (isolates:2168; rSTs:1260 tree)
  • Candidatus Izimaplasma (isolates:2)
    • Candidatus Izemoplasmatales (isolates:2)
      • Candidatus Izemoplasmataceae (isolates:1)
        • Candidatus Xianfuyuplasma (isolates:1)
          • Xianfuyuplasma coldseepsis (isolates:1)
      • Hujiaoplasmataceae (isolates:1)
        • Hujiaoplasma (isolates:1)
          • Hujiaoplasma nucleasis (isolates:1)
  • Mollicutes (isolates:482; rSTs:321 tree)
    • Acholeplasmatales (isolates:112; rSTs:87 tree)
      • Acholeplasmataceae (isolates:112; rSTs:87 tree)
        • Acholeplasma (isolates:25; rSTs:19 tree)
          • Acholeplasma equifetale (isolates:1; rSTs:1)
          • Acholeplasma equirhinis (isolates:1; rSTs:1)
          • Acholeplasma granularum (isolates:1; rSTs:1)
          • Acholeplasma hippikon (isolates:2; rSTs:1)
          • Acholeplasma laidlawii (isolates:17; rSTs:13 tree)
          • Acholeplasma oculi (isolates:3; rSTs:2)
        • Alteracholeplasma (isolates:1; rSTs:1)
          • Alteracholeplasma palmae (isolates:1; rSTs:1)
        • Candidatus Phytoplasma (isolates:74; rSTs:58 tree)
          • 'Chrysanthemum coronarium' phytoplasma (isolates:1)
          • 'Cynodon dactylon' phytoplasma (isolates:1; rSTs:1)
          • 'Fragaria x ananassa' phyllody phytoplasma (isolates:1; rSTs:1)
          • 'Santalum album' aster yellows phytoplasma (isolates:1; rSTs:1)
          • Aster yellows witches'-broom phytoplasma (isolates:1; rSTs:1)
          • Candidatus Phytoplasma asiaticum (isolates:3; rSTs:1)
          • Candidatus Phytoplasma australasiaticum (isolates:14; rSTs:8 tree)
          • Candidatus Phytoplasma australiense (isolates:2; rSTs:2)
          • Candidatus Phytoplasma bonamiae (isolates:1)
          • Candidatus Phytoplasma citri (isolates:3; rSTs:2)
          • Candidatus Phytoplasma crotalariae (isolates:1)
          • Candidatus Phytoplasma fabacearum (isolates:5; rSTs:4 tree)
          • Candidatus Phytoplasma fraxini (isolates:1; rSTs:1)
          • Candidatus Phytoplasma gossypii (isolates:1; rSTs:1)
          • Candidatus Phytoplasma luffae (isolates:1; rSTs:1)
          • Candidatus Phytoplasma mali (isolates:1; rSTs:1)
          • Candidatus Phytoplasma melaleucae (isolates:1; rSTs:1)
          • Candidatus Phytoplasma meliae (isolates:1; rSTs:1)
          • Candidatus Phytoplasma oryzae (isolates:1; rSTs:1)
          • Candidatus Phytoplasma phoenicium (isolates:1)
          • Candidatus Phytoplasma pini (isolates:1; rSTs:1)
          • Candidatus Phytoplasma planchoniae (isolates:1; rSTs:1)
          • Candidatus Phytoplasma pruni (isolates:1; rSTs:1)
          • Candidatus Phytoplasma prunorum (isolates:2; rSTs:2)
          • Candidatus Phytoplasma rubi (isolates:1; rSTs:1)
          • Candidatus Phytoplasma sacchari (isolates:2; rSTs:2)
          • Candidatus Phytoplasma solani (isolates:2; rSTs:2)
          • Candidatus Phytoplasma sp. (isolates:1; rSTs:2)
          • Candidatus Phytoplasma tritici (isolates:1; rSTs:1)
          • Candidatus Phytoplasma ziziphi (isolates:2; rSTs:1)
          • Chrysanthemum yellows phytoplasma (isolates:1; rSTs:1)
          • Columbia Basin potato purple top phytoplasma (isolates:1; rSTs:1)
          • Hydrangea phyllody phytoplasma (isolates:2; rSTs:1)
          • Italian clover phyllody phytoplasma (isolates:1; rSTs:1)
          • Maize bushy stunt phytoplasma (isolates:1; rSTs:1)
          • Milkweed yellows phytoplasma (isolates:1; rSTs:1)
          • Mulberry dwarf phytoplasma (isolates:1; rSTs:1)
          • New Jersey aster yellows phytoplasma (isolates:1; rSTs:1)
          • Onion yellows phytoplasma (isolates:1; rSTs:1)
          • Paulownia witches'-broom phytoplasma (isolates:2; rSTs:1)
          • Peanut witches'-broom phytoplasma (isolates:1; rSTs:1)
          • Phytoplasma sp. (isolates:1; rSTs:1)
          • Poinsettia branch-inducing phytoplasma (isolates:1; rSTs:1)
          • Rice orange leaf phytoplasma (isolates:1; rSTs:1)
          • Texas Phoenix palm phytoplasma (isolates:1; rSTs:1)
          • Vaccinium witches'-broom phytoplasma (isolates:1; rSTs:1)
        • Haploplasma (isolates:4; rSTs:3 tree)
          • Haploplasma axanthum (isolates:2; rSTs:1)
          • Haploplasma modicum (isolates:2; rSTs:2)
        • Mariniplasma (isolates:2; rSTs:1)
          • Mariniplasma anaerobium (isolates:2; rSTs:1)
        • Paracholeplasma (isolates:5; rSTs:4 tree)
          • Paracholeplasma brassicae (isolates:1; rSTs:1)
          • Paracholeplasma manati (isolates:2; rSTs:1)
          • Paracholeplasma morum (isolates:1; rSTs:1)
          • Paracholeplasma vituli (isolates:1; rSTs:1)
        • Peloplasma (isolates:1; rSTs:1)
          • Peloplasma aerotolerans (isolates:1; rSTs:1)
    • Anaeroplasmatales (isolates:1; rSTs:1)
      • Anaeroplasmataceae (isolates:1; rSTs:1)
        • Anaeroplasma (isolates:1; rSTs:1)
          • Anaeroplasma bactoclasticum (isolates:1; rSTs:1)
    • Entomoplasmatales (isolates:151; rSTs:83 tree)
      • Entomoplasmataceae (isolates:41; rSTs:28 tree)
        • Entomoplasma (isolates:3; rSTs:2 tree)
          • Entomoplasma ellychniae (isolates:1; rSTs:1)
          • Entomoplasma freundtii (isolates:2; rSTs:1)
        • Mesoplasma (isolates:38; rSTs:26 tree)
          • Mesoplasma chauliocola (isolates:2; rSTs:1)
          • Mesoplasma coleopterae (isolates:3; rSTs:3 tree)
          • Mesoplasma corruscae (isolates:1; rSTs:1)
          • Mesoplasma entomophilum (isolates:3; rSTs:2)
          • Mesoplasma florum (isolates:10; rSTs:7 tree)
          • Mesoplasma grammopterae (isolates:1; rSTs:1)
          • Mesoplasma lactucae (isolates:3; rSTs:2)
          • Mesoplasma melaleucae (isolates:2; rSTs:1)
          • Mesoplasma photuris (isolates:1; rSTs:1)
          • Mesoplasma seiffertii (isolates:1; rSTs:1)
          • Mesoplasma sp. (isolates:8; rSTs:4 tree)
          • Mesoplasma syrphidae (isolates:2; rSTs:1)
          • Mesoplasma tabanidae (isolates:1; rSTs:1)
      • Spiroplasmataceae (isolates:104; rSTs:52 tree)
        • Spiroplasma (isolates:104; rSTs:52 tree)
          • Spiroplasma alleghenense (isolates:1; rSTs:1)
          • Spiroplasma apis (isolates:1; rSTs:1)
          • Spiroplasma atrichopogonis (isolates:1; rSTs:1)
          • Spiroplasma cantharicola (isolates:1; rSTs:1)
          • Spiroplasma chinense (isolates:1; rSTs:1)
          • Spiroplasma chrysopicola (isolates:1; rSTs:1)
          • Spiroplasma citri (isolates:11; rSTs:4 tree)
          • Spiroplasma clarkii (isolates:1; rSTs:1)
          • Spiroplasma corruscae (isolates:1; rSTs:1)
          • Spiroplasma culicicola (isolates:1; rSTs:1)
          • Spiroplasma diminutum (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of 'Nebria riversi' (isolates:1)
          • Spiroplasma endosymbiont of Acasis viretata (isolates:1)
          • Spiroplasma endosymbiont of Agriotes lineatus (isolates:1)
          • Spiroplasma endosymbiont of Ammophila pubescens (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Amphibalanus improvisus (isolates:1)
          • Spiroplasma endosymbiont of Amphimallon solstitiale (isolates:1)
          • Spiroplasma endosymbiont of Asaphidion curtum (isolates:1)
          • Spiroplasma endosymbiont of Aspidapion aeneum (isolates:1)
          • Spiroplasma endosymbiont of Atherix ibis (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Calodromius spilotus (isolates:1)
          • Spiroplasma endosymbiont of Cantharis lateralis (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Cantharis nigra (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Cantharis rufa (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Clivina fossor (isolates:1)
          • Spiroplasma endosymbiont of Colias croceus (isolates:1)
          • Spiroplasma endosymbiont of Crioceris asparagi (isolates:1)
          • Spiroplasma endosymbiont of Danaus chrysippus (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Dilophus febrilis (isolates:1)
          • Spiroplasma endosymbiont of Dioctria linearis (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Diplazon laetatorius (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Dromius quadrimaculatus (isolates:1)
          • Spiroplasma endosymbiont of Eupeodes luniger (isolates:1)
          • Spiroplasma endosymbiont of Labia minor (isolates:1)
          • Spiroplasma endosymbiont of Lariophagus distinguendus (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Lasioglossum malachurum (isolates:1)
          • Spiroplasma endosymbiont of Lasioglossum villosulum (isolates:1)
          • Spiroplasma endosymbiont of Lonchoptera lutea (isolates:1)
          • Spiroplasma endosymbiont of Megaselia nigra (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Nebria brevicollis (isolates:1)
          • Spiroplasma endosymbiont of Nephrotoma flavescens (isolates:1)
          • Spiroplasma endosymbiont of Nomada ruficornis (isolates:1)
          • Spiroplasma endosymbiont of Notiophilus biguttatus (isolates:1)
          • Spiroplasma endosymbiont of Othius punctulatus (isolates:1)
          • Spiroplasma endosymbiont of Panorpa germanica (isolates:1)
          • Spiroplasma endosymbiont of Panzeria rudis (isolates:1)
          • Spiroplasma endosymbiont of Poecilobothrus nobilitatus (isolates:1)
          • Spiroplasma endosymbiont of Polydrusus cervinus (isolates:1)
          • Spiroplasma endosymbiont of Sarcophaga carnaria (isolates:1)
          • Spiroplasma endosymbiont of Seladonia tumulorum (isolates:1; rSTs:1)
          • Spiroplasma endosymbiont of Thecophora atra (isolates:1)
          • Spiroplasma endosymbiont of Tricholauxania praeusta (isolates:1)
          • Spiroplasma endosymbiont of Villa modesta (isolates:1)
          • Spiroplasma endosymbiont of Zeiraphera isertana (isolates:1)
          • Spiroplasma eriocheiris (isolates:2; rSTs:1)
          • Spiroplasma floricola (isolates:1; rSTs:1)
          • Spiroplasma gladiatoris (isolates:1; rSTs:1)
          • Spiroplasma helicoides (isolates:1; rSTs:1)
          • Spiroplasma ixodetis (isolates:1)
          • Spiroplasma kunkelii (isolates:1; rSTs:1)
          • Spiroplasma litorale (isolates:1; rSTs:1)
          • Spiroplasma melliferum (isolates:4; rSTs:3 tree)
          • Spiroplasma monobiae (isolates:1; rSTs:1)
          • Spiroplasma phoeniceum (isolates:1; rSTs:1)
          • Spiroplasma platyhelix (isolates:2; rSTs:1)
          • Spiroplasma poulsonii (isolates:6; rSTs:3 tree)
          • Spiroplasma sabaudiense (isolates:1; rSTs:1)
          • Spiroplasma sp. (isolates:12; rSTs:7 tree)
          • Spiroplasma syrphidicola (isolates:1; rSTs:1)
          • Spiroplasma tabanidicola (isolates:1; rSTs:1)
          • Spiroplasma taiwanense (isolates:1; rSTs:1)
          • Spiroplasma turonicum (isolates:2; rSTs:1)
    • Haloplasmatales (isolates:1; rSTs:1)
      • Haloplasmataceae (isolates:1; rSTs:1)
        • Haloplasma (isolates:1; rSTs:1)
          • Haloplasma contractile (isolates:1; rSTs:1)
    • Mycoplasmatales (isolates:217; rSTs:149 tree)
      • Candidatus Hepatoplasmataceae (isolates:2; rSTs:2)
        • Candidatus Hepatoplasma (isolates:2; rSTs:2)
          • Candidatus Hepatoplasma crinochetorum (isolates:2; rSTs:2)
      • Mycoplasmataceae (isolates:215; rSTs:147 tree)
        • Mycoplasma (isolates:215; rSTs:147 tree)
          • Candidatus Mycoplasma haematobovis (isolates:1)
          • Candidatus Mycoplasma haematohominis (isolates:1)
          • Candidatus Mycoplasma haematolamae (isolates:1)
          • Candidatus Mycoplasma haematominutum (isolates:1)
          • Candidatus Mycoplasma mahonii (isolates:1)
          • Mycoplasma amphoriforme (isolates:20; rSTs:11 tree)
          • Mycoplasma anserisalpingitidis (isolates:5; rSTs:4 tree)
          • Mycoplasma bradburyae (isolates:7; rSTs:6 tree)
          • Mycoplasma buteonis (isolates:1; rSTs:1)
          • Mycoplasma capricolum (isolates:32; rSTs:25 tree)
          • Mycoplasma cottewii (isolates:1; rSTs:1)
          • Mycoplasma crocodyli (isolates:1; rSTs:1)
          • Mycoplasma elephantis (isolates:1; rSTs:1)
          • Mycoplasma enhydrae (isolates:3; rSTs:3 tree)
          • Mycoplasma feriruminatoris (isolates:10; rSTs:10 tree)
          • Mycoplasma haemocanis (isolates:1; rSTs:1)
          • Mycoplasma haemofelis (isolates:2; rSTs:2)
          • Mycoplasma leachii (isolates:3; rSTs:3 tree)
          • Mycoplasma leonicaptivi (isolates:1; rSTs:1)
          • Mycoplasma marinum (isolates:1; rSTs:1)
          • Mycoplasma miroungigenitalium (isolates:3; rSTs:3 tree)
          • Mycoplasma miroungirhinis (isolates:1; rSTs:1)
          • Mycoplasma mycoides (isolates:70; rSTs:32 tree)
          • Mycoplasma nasistruthionis (isolates:2; rSTs:1)
          • Mycoplasma ovis (isolates:1; rSTs:1)
          • Mycoplasma parvum (isolates:1)
          • Mycoplasma phocimorsus (isolates:6; rSTs:6 tree)
          • Mycoplasma phocoenae (isolates:1; rSTs:1)
          • Mycoplasma phocoeninasale (isolates:2; rSTs:2)
          • Mycoplasma procyoni (isolates:1; rSTs:1)
          • Mycoplasma putrefaciens (isolates:3; rSTs:2)
          • Mycoplasma simbae (isolates:1; rSTs:1)
          • Mycoplasma sp. (isolates:3; rSTs:3 tree)
          • Mycoplasma struthionis (isolates:2; rSTs:2)
          • Mycoplasma suis (isolates:2)
          • Mycoplasma tauri (isolates:7; rSTs:7 tree)
          • Mycoplasma testudineum (isolates:2; rSTs:1)
          • Mycoplasma todarodis (isolates:1)
          • Mycoplasma tullyi (isolates:1; rSTs:1)
          • Mycoplasma wenyonii (isolates:2; rSTs:2)
          • Mycoplasma yeatsii (isolates:3; rSTs:3 tree)
          • Mycoplasma zalophi (isolates:3; rSTs:3 tree)
          • Mycoplasma zalophidermidis (isolates:3; rSTs:3 tree)
• Myxococcota (isolates:200; rSTs:167 tree)
  • Myxococcia (isolates:159; rSTs:131 tree)
    • Myxococcales (isolates:159; rSTs:131 tree)
      • Anaeromyxobacteraceae (isolates:15; rSTs:14 tree)
        • Anaeromyxobacter (isolates:15; rSTs:14 tree)
          • Anaeromyxobacter dehalogenans (isolates:2; rSTs:2)
          • Anaeromyxobacter diazotrophicus (isolates:1; rSTs:1)
          • Anaeromyxobacter oryzae (isolates:1; rSTs:1)
          • Anaeromyxobacter oryzisoli (isolates:1; rSTs:1)
          • Anaeromyxobacter paludicola (isolates:1; rSTs:1)
          • Anaeromyxobacter soli (isolates:1; rSTs:1)
          • Anaeromyxobacter sp. (isolates:7; rSTs:6 tree)
          • Anaeromyxobacter terrae (isolates:1; rSTs:1)
      • Archangiaceae (isolates:19; rSTs:18 tree)
        • Archangium (isolates:6; rSTs:5 tree)
          • Archangium gephyra (isolates:2; rSTs:1)
          • Archangium lansinium (isolates:1; rSTs:1)
          • Archangium lipolyticum (isolates:1; rSTs:1)
          • Archangium sp. (isolates:1; rSTs:1 tree)
          • Archangium violaceum (isolates:1; rSTs:1)
        • Cystobacter (isolates:3; rSTs:3 tree)
          • Cystobacter ferrugineus (isolates:1; rSTs:1)
          • Cystobacter fuscus (isolates:2; rSTs:2)
        • Hyalangium (isolates:4; rSTs:4 tree)
          • Hyalangium gracile (isolates:1; rSTs:1)
          • Hyalangium minutum (isolates:1; rSTs:1)
          • Hyalangium ruber (isolates:1; rSTs:1)
          • Hyalangium versicolor (isolates:1; rSTs:1)
        • Melittangium (isolates:1; rSTs:1)
          • Melittangium boletus (isolates:1; rSTs:1)
        • Stigmatella (isolates:4; rSTs:4 tree)
          • Stigmatella ashevillena (isolates:1; rSTs:1)
          • Stigmatella aurantiaca (isolates:1; rSTs:1)
          • Stigmatella erecta (isolates:1; rSTs:1)
          • Stigmatella hybrida (isolates:1; rSTs:1)
        • Vitiosangium (isolates:1; rSTs:1)
          • Vitiosangium sp. (isolates:1; rSTs:1)
      • Myxococcaceae (isolates:120; rSTs:95 tree)
        • Aggregicoccus (isolates:1; rSTs:1)
          • Aggregicoccus sp. (isolates:1; rSTs:1)
        • Citreicoccus (isolates:1; rSTs:1)
          • Citreicoccus inhibens (isolates:1; rSTs:1)
        • Corallococcus (isolates:52; rSTs:48 tree)
          • Corallococcus aberystwythensis (isolates:1; rSTs:1)
          • Corallococcus caeni (isolates:2; rSTs:2)
          • Corallococcus carmarthensis (isolates:2; rSTs:2)
          • Corallococcus coralloides (isolates:2; rSTs:2)
          • Corallococcus exercitus (isolates:1; rSTs:1)
          • Corallococcus exiguus (isolates:13; rSTs:12 tree)
          • Corallococcus interemptor (isolates:1; rSTs:1)
          • Corallococcus llansteffanensis (isolates:1; rSTs:1)
          • Corallococcus macrosporus (isolates:2; rSTs:2)
          • Corallococcus praedator (isolates:1; rSTs:1)
          • Corallococcus sicarius (isolates:1; rSTs:1)
          • Corallococcus silvisoli (isolates:1; rSTs:1)
          • Corallococcus soli (isolates:1; rSTs:1)
          • Corallococcus sp. (isolates:22; rSTs:19 tree)
          • Corallococcus terminator (isolates:1; rSTs:1)
        • Myxococcus (isolates:59; rSTs:39 tree)
          • Myxococcus dinghuensis (isolates:1; rSTs:1)
          • Myxococcus eversor (isolates:1; rSTs:1)
          • Myxococcus fulvus (isolates:4; rSTs:2)
          • Myxococcus guangdongensis (isolates:1; rSTs:1)
          • Myxococcus hansupus (isolates:1; rSTs:1)
          • Myxococcus landrumus (isolates:1; rSTs:1)
          • Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis (isolates:1; rSTs:1)
          • Myxococcus qinghaiensis (isolates:1; rSTs:1)
          • Myxococcus sp. (isolates:25; rSTs:18 tree)
          • Myxococcus stipitatus (isolates:2; rSTs:2)
          • Myxococcus vastator (isolates:1; rSTs:1)
          • Myxococcus virescens (isolates:2; rSTs:1)
          • Myxococcus xanthus (isolates:18; rSTs:8 tree)
        • Pyxidicoccus (isolates:7; rSTs:6 tree)
          • Pyxidicoccus caerfyrddinensis (isolates:1; rSTs:1)
          • Pyxidicoccus fallax (isolates:2; rSTs:1)
          • Pyxidicoccus parkwaysis (isolates:1; rSTs:1)
          • Pyxidicoccus sp. (isolates:1; rSTs:1)
          • Pyxidicoccus trucidator (isolates:1; rSTs:1)
          • Pyxidicoccus xibeiensis (isolates:1; rSTs:1)
      • Vulgatibacteraceae (isolates:1; rSTs:1)
        • Vulgatibacter (isolates:1; rSTs:1)
          • Vulgatibacter incomptus (isolates:1; rSTs:1)
• Nitrospinota (isolates:8; rSTs:3 tree)
  • Nitrospinia (isolates:8; rSTs:3 tree)
    • Nitrospinales (isolates:8; rSTs:3 tree)
      • Nitrospinaceae (isolates:8; rSTs:3 tree)
        • Candidatus Nitromaritima (isolates:3)
          • Candidatus Nitromaritima sp. (isolates:3)
        • Nitrospina (isolates:5; rSTs:3 tree)
          • Nitrospina gracilis (isolates:2; rSTs:2)
          • Nitrospina sp. (isolates:2)
          • Nitrospina watsonii (isolates:1; rSTs:1)
• Nitrospirota (isolates:41; rSTs:32 tree)
  • Nitrospiria (isolates:26; rSTs:21 tree)
    • Candidatus Troglogloeales (isolates:1)
      • Candidatus Manganitrophaceae (isolates:1)
        • Candidatus Manganitrophus (isolates:1)
          • Candidatus Manganitrophus noduliformans (isolates:1)
    • Nitrospirales (isolates:25; rSTs:21 tree)
      • Nitrospiraceae (isolates:25; rSTs:21 tree)
        • Candidatus Nitronereus (isolates:1; rSTs:1)
          • Candidatus Nitronereus thalassa (isolates:1; rSTs:1)
        • Candidatus Sulfobium (isolates:1)
          • Candidatus Sulfobium mesophilum (isolates:1)
        • Leptospirillum (isolates:10; rSTs:7 tree)
          • Leptospirillum ferriphilum (isolates:7; rSTs:5 tree)
          • Leptospirillum ferrooxidans (isolates:1; rSTs:1)
          • Leptospirillum sp. (isolates:2; rSTs:1)
        • Nitrospira (isolates:13; rSTs:13 tree)
          • Candidatus Nitrospira inopinata (isolates:1; rSTs:1)
          • Candidatus Nitrospira nitrificans (isolates:1; rSTs:1)
          • Candidatus Nitrospira nitrosa (isolates:1; rSTs:1)
          • Nitrospira cf. moscoviensis SBR1015 (isolates:1; rSTs:1)
          • Nitrospira defluvii (isolates:2; rSTs:2)
          • Nitrospira japonica (isolates:1; rSTs:1)
          • Nitrospira lenta (isolates:1; rSTs:1)
          • Nitrospira moscoviensis (isolates:1; rSTs:1)
          • Nitrospira sp. (isolates:3; rSTs:3 tree)
          • Nitrospira tepida (isolates:1; rSTs:1)
  • Thermodesulfovibrionia (isolates:15; rSTs:11 tree)
    • Thermodesulfovibrionales (isolates:15; rSTs:11 tree)
      • Candidatus Magnetobacteriaceae (isolates:3; rSTs:1)
        • Candidatus Magnetobacterium (isolates:3; rSTs:1)
          • Candidatus Magnetobacterium bavaricum (isolates:1)
          • Candidatus Magnetobacterium casense (isolates:2; rSTs:1)
      • Dissulfurispiraceae (isolates:1; rSTs:1)
        • Dissulfurispira (isolates:1; rSTs:1)
          • Dissulfurispira thermophila (isolates:1; rSTs:1)
      • Thermodesulfovibrionaceae (isolates:11; rSTs:9 tree)
        • Thermodesulfovibrio (isolates:11; rSTs:9 tree)
          • Thermodesulfovibrio aggregans (isolates:2; rSTs:1)
          • Thermodesulfovibrio islandicus (isolates:2; rSTs:2)
          • Thermodesulfovibrio sp. (isolates:5; rSTs:4 tree)
          • Thermodesulfovibrio thiophilus (isolates:1; rSTs:1)
          • Thermodesulfovibrio yellowstonii (isolates:1; rSTs:1)
• Planctomycetota (isolates:197; rSTs:160 tree)
  • Candidatus Brocadiia (isolates:16; rSTs:9 tree)
    • Candidatus Brocadiales (isolates:16; rSTs:9 tree)
      • Candidatus Bathyanammoxibiaceae (isolates:1)
        • Candidatus Bathyanammoxibius (isolates:1)
          • Candidatus Bathyanammoxibius sp. (isolates:1)
      • Candidatus Brocadiaceae (isolates:12; rSTs:6 tree)
        • Candidatus Brocadia (isolates:5; rSTs:3 tree)
          • Candidatus Brocadia fulgida (isolates:1; rSTs:1)
          • Candidatus Brocadia sapporoensis (isolates:1; rSTs:1)
          • Candidatus Brocadia sinica (isolates:2; rSTs:1)
          • Candidatus Brocadia sp. (isolates:1)
        • Candidatus Jettenia (isolates:2; rSTs:1)
          • Candidatus Jettenia caeni (isolates:1; rSTs:1)
          • Candidatus Jettenia sp. (isolates:1)
        • Candidatus Kuenenia (isolates:4; rSTs:2)
          • Candidatus Kuenenia stuttgartiensis (isolates:4; rSTs:2)
        • Candidatus Loosdrechtia (isolates:1)
          • Candidatus Loosdrechtia aerotolerans (isolates:1)
      • Candidatus Scalinduaceae (isolates:3; rSTs:3 tree)
        • Candidatus Scalindua (isolates:3; rSTs:3 tree)
          • Candidatus Scalindua brodae (isolates:1; rSTs:1)
          • Candidatus Scalindua japonica (isolates:1; rSTs:1)
          • Candidatus Scalindua rubra (isolates:1; rSTs:1)
  • Candidatus Uabimicrobiia (isolates:1)
    • Candidatus Uabimicrobiales (isolates:1)
      • Candidatus Uabimicrobiaceae (isolates:1)
        • Candidatus Uabimicrobium (isolates:1)
          • Candidatus Uabimicrobium amorphum (isolates:1)
  • Phycisphaerae (isolates:12; rSTs:7 tree)
    • Phycisphaerales (isolates:5; rSTs:4 tree)
      • Phycisphaeraceae (isolates:5; rSTs:4 tree)
        • Algisphaera (isolates:1; rSTs:1)
          • Algisphaera agarilytica (isolates:1; rSTs:1)
        • Mucisphaera (isolates:1; rSTs:1)
          • Mucisphaera calidilacus (isolates:1; rSTs:1)
        • Phycisphaera (isolates:2; rSTs:1)
          • Phycisphaera mikurensis (isolates:2; rSTs:1)
        • Poriferisphaera (isolates:1; rSTs:1)
          • Poriferisphaera corsica (isolates:1; rSTs:1)
    • Sedimentisphaerales (isolates:6; rSTs:3 tree)
      • Anaerobacaceae (isolates:1)
        • Anaerobaca (isolates:1)
          • Anaerobaca lacustris (isolates:1)
      • Anaerohalosphaeraceae (isolates:1)
        • Anaerohalosphaera (isolates:1)
          • Anaerohalosphaera lusitana (isolates:1)
      • Sedimentisphaeraceae (isolates:4; rSTs:3 tree)
        • Limihaloglobus (isolates:1)
          • Limihaloglobus sulfuriphilus (isolates:1)
        • Sedimentisphaera (isolates:3; rSTs:3 tree)
          • Sedimentisphaera cyanobacteriorum (isolates:1; rSTs:1)
          • Sedimentisphaera salicampi (isolates:2; rSTs:2)
    • Tepidisphaerales (isolates:1)
      • Tepidisphaeraceae (isolates:1)
        • Humisphaera (isolates:1)
          • Humisphaera borealis (isolates:1)
  • Planctomycetia (isolates:168; rSTs:144 tree)
    • Gemmatales (isolates:20; rSTs:13 tree)
      • Gemmataceae (isolates:20; rSTs:13 tree)
        • Fimbriiglobus (isolates:1; rSTs:1)
          • Fimbriiglobus ruber (isolates:1; rSTs:1)
        • Frigoriglobus (isolates:1; rSTs:1)
          • Frigoriglobus tundricola (isolates:1; rSTs:1)
        • Gemmata (isolates:12; rSTs:6 tree)
          • Gemmata algarum (isolates:4)
          • Gemmata massiliana (isolates:2; rSTs:2)
          • Gemmata obscuriglobus (isolates:4; rSTs:2)
          • Gemmata palustris (isolates:1; rSTs:1)
          • Gemmata sp. (isolates:1; rSTs:1)
        • Limnoglobus (isolates:1; rSTs:1)
          • Limnoglobus roseus (isolates:1; rSTs:1)
        • Telmatocola (isolates:1; rSTs:1)
          • Telmatocola sphagniphila (isolates:1; rSTs:1)
        • Thermogemmata (isolates:1; rSTs:1)
          • Thermogemmata fonticola (isolates:1; rSTs:1)
        • Tuwongella (isolates:1)
          • Tuwongella immobilis (isolates:1)
        • Urbifossiella (isolates:1; rSTs:1)
          • Urbifossiella limnaea (isolates:1; rSTs:1)
        • Zavarzinella (isolates:1; rSTs:1)
          • Zavarzinella formosa (isolates:1; rSTs:1)
    • Isosphaerales (isolates:18; rSTs:13 tree)
      • Isosphaeraceae (isolates:18; rSTs:13 tree)
        • Aquisphaera (isolates:2; rSTs:2)
          • Aquisphaera giovannonii (isolates:1; rSTs:1)
          • Aquisphaera insulae (isolates:1; rSTs:1)
        • Isosphaera (isolates:2; rSTs:1)
          • Isosphaera pallida (isolates:2; rSTs:1)
        • Paludisphaera (isolates:4; rSTs:3 tree)
          • Paludisphaera borealis (isolates:1; rSTs:1)
          • Paludisphaera rhizosphaerae (isolates:2; rSTs:1)
          • Paludisphaera soli (isolates:1; rSTs:1)
        • Singulisphaera (isolates:3; rSTs:2)
          • Singulisphaera acidiphila (isolates:2; rSTs:1)
          • Singulisphaera sp. (isolates:1; rSTs:1)
        • Tautonia (isolates:7; rSTs:5 tree)
          • Tautonia marina (isolates:1; rSTs:1)
          • Tautonia plasticadhaerens (isolates:1; rSTs:1)
          • Tautonia rosea (isolates:3; rSTs:1)
          • Tautonia sociabilis (isolates:1; rSTs:1)
          • Tautonia sp. (isolates:1; rSTs:1)
    • Pirellulales (isolates:83; rSTs:77 tree)
      • Lacipirellulaceae (isolates:14; rSTs:14 tree)
        • Adhaeretor (isolates:1; rSTs:1)
          • Adhaeretor mobilis (isolates:1; rSTs:1)
        • Aeoliella (isolates:2; rSTs:2)
          • Aeoliella mucimassa (isolates:1; rSTs:1)
          • Aeoliella straminimaris (isolates:1; rSTs:1)
        • Botrimarina (isolates:3; rSTs:3 tree)
          • Botrimarina colliarenosi (isolates:1; rSTs:1)
          • Botrimarina hoheduenensis (isolates:1; rSTs:1)
          • Botrimarina mediterranea (isolates:1; rSTs:1)
        • Bythopirellula (isolates:2; rSTs:2)
          • Bythopirellula goksoeyrii (isolates:1; rSTs:1)
          • Bythopirellula polymerisocia (isolates:1; rSTs:1)
        • Lacipirellula (isolates:2; rSTs:2)
          • Lacipirellula limnantheis (isolates:1; rSTs:1)
          • Lacipirellula parvula (isolates:1; rSTs:1)
        • Pirellulimonas (isolates:1; rSTs:1)
          • Pirellulimonas nuda (isolates:1; rSTs:1)
        • Posidoniimonas (isolates:2; rSTs:2)
          • Posidoniimonas corsicana (isolates:1; rSTs:1)
          • Posidoniimonas polymericola (isolates:1; rSTs:1)
        • Pseudobythopirellula (isolates:1; rSTs:1)
          • Pseudobythopirellula maris (isolates:1; rSTs:1)
      • Pirellulaceae (isolates:68; rSTs:62 tree)
        • Allorhodopirellula (isolates:2; rSTs:2)
          • Allorhodopirellula heiligendammensis (isolates:1; rSTs:1)
          • Allorhodopirellula solitaria (isolates:1; rSTs:1)
        • Anatilimnocola (isolates:2; rSTs:2)
          • Anatilimnocola aggregata (isolates:1; rSTs:1)
          • Anatilimnocola floriformis (isolates:1; rSTs:1)
        • Aporhodopirellula (isolates:2; rSTs:2)
          • Aporhodopirellula aestuarii (isolates:1; rSTs:1)
          • Aporhodopirellula rubra (isolates:1; rSTs:1)
        • Aureliella (isolates:1; rSTs:1)
          • Aureliella helgolandensis (isolates:1; rSTs:1)
        • Blastopirellula (isolates:5; rSTs:4 tree)
          • Blastopirellula marina (isolates:1; rSTs:1)
          • Blastopirellula retiformator (isolates:1; rSTs:1)
          • Blastopirellula sediminis (isolates:2; rSTs:1)
          • Blastopirellula sp. (isolates:1; rSTs:1)
        • Bremerella (isolates:8; rSTs:8 tree)
          • Bremerella alba (isolates:1; rSTs:1)
          • Bremerella cremea (isolates:2; rSTs:2)
          • Bremerella sp. (isolates:4; rSTs:4 tree)
          • Bremerella volcania (isolates:1; rSTs:1)
        • Candidatus Laterigemmans (isolates:2; rSTs:1)
          • Candidatus Laterigemmans baculatus (isolates:2; rSTs:1)
        • Lignipirellula (isolates:1; rSTs:1)
          • Lignipirellula cremea (isolates:1; rSTs:1)
        • Mariniblastus (isolates:2; rSTs:2)
          • Mariniblastus fucicola (isolates:2; rSTs:2)
        • Neorhodopirellula (isolates:2; rSTs:2)
          • Neorhodopirellula lusitana (isolates:1; rSTs:1)
          • Neorhodopirellula pilleata (isolates:1; rSTs:1)
        • Novipirellula (isolates:3; rSTs:3 tree)
          • Novipirellula artificiosorum (isolates:1; rSTs:1)
          • Novipirellula aureliae (isolates:1; rSTs:1)
          • Novipirellula galeiformis (isolates:1; rSTs:1)
        • Pirellula (isolates:1; rSTs:1)
          • Pirellula staleyi (isolates:1; rSTs:1)
        • Rhodopirellula (isolates:13; rSTs:12 tree)
          • Rhodopirellula bahusiensis (isolates:1; rSTs:1)
          • Rhodopirellula baltica (isolates:4; rSTs:4 tree)
          • Rhodopirellula europaea (isolates:2; rSTs:1)
          • Rhodopirellula halodulae (isolates:2; rSTs:2)
          • Rhodopirellula islandica (isolates:1; rSTs:1)
          • Rhodopirellula maiorica (isolates:1; rSTs:1)
          • Rhodopirellula sallentina (isolates:1; rSTs:1)
          • Rhodopirellula sp. (isolates:1; rSTs:1 tree)
        • Roseiconus (isolates:4; rSTs:4 tree)
          • Roseiconus lacunae (isolates:3; rSTs:3 tree)
          • Roseiconus nitratireducens (isolates:1; rSTs:1)
        • Roseimaritima (isolates:4; rSTs:3 tree)
          • Roseimaritima multifibrata (isolates:1; rSTs:1)
          • Roseimaritima sediminicola (isolates:1; rSTs:1)
          • Roseimaritima ulvae (isolates:2; rSTs:1)
        • Rosistilla (isolates:4; rSTs:4 tree)
          • Rosistilla carotiformis (isolates:1; rSTs:1)
          • Rosistilla oblonga (isolates:2; rSTs:2)
          • Rosistilla ulvae (isolates:1; rSTs:1)
        • Rubripirellula (isolates:6; rSTs:5 tree)
          • Rubripirellula amarantea (isolates:1; rSTs:1)
          • Rubripirellula lacrimiformis (isolates:1; rSTs:1)
          • Rubripirellula obstinata (isolates:2; rSTs:1)
          • Rubripirellula reticaptiva (isolates:1; rSTs:1)
          • Rubripirellula tenax (isolates:1; rSTs:1)
        • Stieleria (isolates:6; rSTs:5 tree)
          • Stieleria maiorica (isolates:1; rSTs:1)
          • Stieleria neptunia (isolates:1; rSTs:1)
          • Stieleria sedimenti (isolates:1; rSTs:1)
          • Stieleria tagensis (isolates:1; rSTs:1)
          • Stieleria varia (isolates:2; rSTs:1)
      • Thermoguttaceae (isolates:1; rSTs:1)
        • Thermogutta (isolates:1; rSTs:1)
          • Thermogutta terrifontis (isolates:1; rSTs:1)
    • Planctomycetales (isolates:47; rSTs:41 tree)
      • Planctomycetaceae (isolates:47; rSTs:41 tree)
        • Alienimonas (isolates:2; rSTs:2)
          • Alienimonas californiensis (isolates:1; rSTs:1)
          • Alienimonas chondri (isolates:1; rSTs:1)
        • Calycomorphotria (isolates:1; rSTs:1)
          • Calycomorphotria hydatis (isolates:1; rSTs:1)
        • Caulifigura (isolates:1; rSTs:1)
          • Caulifigura coniformis (isolates:1; rSTs:1)
        • Crateriforma (isolates:3; rSTs:3 tree)
          • Crateriforma conspicua (isolates:2; rSTs:2)
          • Crateriforma spongiae (isolates:1; rSTs:1)
        • Fuerstiella (isolates:1; rSTs:1)
          • Fuerstiella marisgermanici (isolates:1; rSTs:1)
        • Gimesia (isolates:18; rSTs:14 tree)
          • Gimesia alba (isolates:1; rSTs:1)
          • Gimesia algae (isolates:1; rSTs:1)
          • Gimesia aquarii (isolates:2; rSTs:2)
          • Gimesia benthica (isolates:1; rSTs:1)
          • Gimesia chilikensis (isolates:4; rSTs:2)
          • Gimesia fumaroli (isolates:1; rSTs:1)
          • Gimesia maris (isolates:5; rSTs:3 tree)
          • Gimesia panareensis (isolates:3; rSTs:3 tree)
        • Maioricimonas (isolates:2; rSTs:2)
          • Maioricimonas rarisocia (isolates:1; rSTs:1)
          • Maioricimonas sp. (isolates:1; rSTs:1)
        • Planctomicrobium (isolates:1; rSTs:1)
          • Planctomicrobium piriforme (isolates:1; rSTs:1)
        • Planctomyces (isolates:1; rSTs:1)
          • Planctomyces sp. (isolates:1; rSTs:1)
        • Planctopirus (isolates:3; rSTs:3 tree)
          • Planctopirus ephydatiae (isolates:1; rSTs:1)
          • Planctopirus hydrillae (isolates:1; rSTs:1)
          • Planctopirus limnophila (isolates:1; rSTs:1)
        • Polystyrenella (isolates:1; rSTs:1)
          • Polystyrenella longa (isolates:1; rSTs:1)
        • Rubinisphaera (isolates:4; rSTs:4 tree)
          • Rubinisphaera brasiliensis (isolates:1; rSTs:1)
          • Rubinisphaera italica (isolates:1; rSTs:1)
          • Rubinisphaera margarita (isolates:1; rSTs:1)
          • Rubinisphaera sp. (isolates:1; rSTs:1)
        • Schlesneria (isolates:1; rSTs:1)
          • Schlesneria paludicola (isolates:1; rSTs:1)
        • Stratiformator (isolates:1)
          • Stratiformator vulcanicus (isolates:1)
        • Symmachiella (isolates:3; rSTs:3 tree)
          • Symmachiella dynata (isolates:2; rSTs:2)
          • Symmachiella macrocystis (isolates:1; rSTs:1)
        • Thalassoglobus (isolates:3; rSTs:2)
          • Thalassoglobus neptunius (isolates:1; rSTs:1)
          • Thalassoglobus polymorphus (isolates:1; rSTs:1)
          • Thalassoglobus sp. (isolates:1)
        • Thalassoroseus (isolates:1; rSTs:1)
          • Thalassoroseus pseudoceratinae (isolates:1; rSTs:1)
• Pseudomonadota (isolates:401983; rSTs:122325)
  • Acidithiobacillia (isolates:121; rSTs:66 tree)
    • Acidithiobacillales (isolates:121; rSTs:66 tree)
      • Acidithiobacillaceae (isolates:114; rSTs:62 tree)
        • Acidithiobacillus (isolates:112; rSTs:61 tree)
          • Acidithiobacillus acidisediminis (isolates:1; rSTs:1)
          • Acidithiobacillus albertensis (isolates:1; rSTs:1)
          • Acidithiobacillus caldus (isolates:18; rSTs:8 tree)
          • Acidithiobacillus concretivorus (isolates:1; rSTs:1)
          • Acidithiobacillus ferrianus (isolates:1; rSTs:1)
          • Acidithiobacillus ferridurans (isolates:7; rSTs:4 tree)
          • Acidithiobacillus ferriphilus (isolates:21; rSTs:13 tree)
          • Acidithiobacillus ferrivorans (isolates:8; rSTs:6 tree)
          • Acidithiobacillus ferrooxidans (isolates:22; rSTs:7 tree)
          • Acidithiobacillus ferruginosus (isolates:1)
          • Acidithiobacillus marinus (isolates:1; rSTs:1)
          • Acidithiobacillus montserratensis (isolates:1; rSTs:1)
          • Acidithiobacillus sp. (isolates:7; rSTs:3 tree)
          • Acidithiobacillus sulfuriphilus (isolates:1; rSTs:1)
          • Acidithiobacillus sulfurivorans (isolates:1; rSTs:1)
          • Acidithiobacillus thiooxidans (isolates:20; rSTs:12 tree)
        • Igneacidithiobacillus (isolates:2; rSTs:1)
          • Candidatus Igneacidithiobacillus taiwanensis (isolates:1)
          • Igneacidithiobacillus copahuensis (isolates:1; rSTs:1)
      • Thermithiobacillaceae (isolates:7; rSTs:4 tree)
        • Thermithiobacillus (isolates:7; rSTs:4 tree)
          • Thermithiobacillus plumbiphilus (isolates:2; rSTs:2)
          • Thermithiobacillus tepidarius (isolates:5; rSTs:2)
  • Alphaproteobacteria (isolates:12653; rSTs:8476)
    • Acetobacterales (isolates:791; rSTs:544)
      • Acetobacteraceae (isolates:667; rSTs:444)
        • Acetobacter (isolates:213; rSTs:122)
          • Acetobacter aceti (isolates:7; rSTs:2)
          • Acetobacter ascendens (isolates:3; rSTs:3)
          • Acetobacter cerevisiae (isolates:8; rSTs:6)
          • Acetobacter cibinongensis (isolates:4; rSTs:2)
          • Acetobacter conturbans (isolates:1; rSTs:1)
          • Acetobacter estunensis (isolates:3; rSTs:2)
          • Acetobacter fabarum (isolates:8; rSTs:4)
          • Acetobacter fallax (isolates:2; rSTs:1)
          • Acetobacter farinalis (isolates:2; rSTs:1)
          • Acetobacter garciniae (isolates:2; rSTs:1)
          • Acetobacter ghanensis (isolates:3; rSTs:1)
          • Acetobacter indonesiensis (isolates:7; rSTs:5)
          • Acetobacter lambici (isolates:3; rSTs:1)
          • Acetobacter lovaniensis (isolates:5; rSTs:2)
          • Acetobacter malorum (isolates:7; rSTs:5)
          • Acetobacter musti (isolates:1; rSTs:1)
          • Acetobacter nitrogenifigens (isolates:3; rSTs:1)
          • Acetobacter oeni (isolates:4; rSTs:1)
          • Acetobacter okinawensis (isolates:5; rSTs:5)
          • Acetobacter orientalis (isolates:10; rSTs:6)
          • Acetobacter orleanensis (isolates:5; rSTs:1)
          • Acetobacter oryzifermentans (isolates:2; rSTs:2)
          • Acetobacter oryzoeni (isolates:2; rSTs:1)
          • Acetobacter papayae (isolates:1; rSTs:1)
          • Acetobacter pasteurianus (isolates:29; rSTs:14)
          • Acetobacter peroxydans (isolates:4; rSTs:1)
          • Acetobacter persici (isolates:9; rSTs:9)
          • Acetobacter pomorum (isolates:7; rSTs:2)
          • Acetobacter sacchari (isolates:1; rSTs:1)
          • Acetobacter senegalensis (isolates:12; rSTs:11)
          • Acetobacter sicerae (isolates:2; rSTs:2)
          • Acetobacter sp. (isolates:25; rSTs:11)
          • Acetobacter suratthaniensis (isolates:2; rSTs:1)
          • Acetobacter syzygii (isolates:6; rSTs:3)
          • Acetobacter thailandicus (isolates:6; rSTs:5)
          • Acetobacter tropicalis (isolates:11; rSTs:5)
          • Acetobacter vaccinii (isolates:1; rSTs:1)
        • Acidibrevibacterium (isolates:1; rSTs:1)
          • Acidibrevibacterium fodinaquatile (isolates:1; rSTs:1)
        • Acidicaldus (isolates:1)
          • Acidicaldus organivorans (isolates:1)
        • Acidisphaera (isolates:1; rSTs:1)
          • Acidisphaera rubrifaciens (isolates:1; rSTs:1)
        • Acidomonas (isolates:5; rSTs:3)
          • Acidomonas methanolica (isolates:5; rSTs:3)
        • Ameyamaea (isolates:3; rSTs:1)
          • Ameyamaea chiangmaiensis (isolates:3; rSTs:1)
        • Aristophania (isolates:2; rSTs:2)
          • Aristophania vespae (isolates:2; rSTs:2)
        • Asaia (isolates:32; rSTs:21)
          • Asaia astilbis (isolates:1; rSTs:1)
          • Asaia bogorensis (isolates:12; rSTs:6)
          • Asaia krungthepensis (isolates:1; rSTs:1)
          • Asaia lannensis (isolates:2; rSTs:1)
          • Asaia platycodi (isolates:1; rSTs:1)
          • Asaia prunellae (isolates:1; rSTs:1)
          • Asaia siamensis (isolates:3; rSTs:1)
          • Asaia sp. (isolates:7; rSTs:6)
          • Asaia spathodeae (isolates:4; rSTs:3)
        • Bombella (isolates:12; rSTs:12)
          • Bombella apis (isolates:2; rSTs:2)
          • Bombella dulcis (isolates:1; rSTs:1)
          • Bombella favorum (isolates:1; rSTs:1)
          • Bombella intestini (isolates:1; rSTs:1)
          • Bombella mellum (isolates:1; rSTs:1)
          • Bombella pluederhausensis (isolates:1; rSTs:1)
          • Bombella pollinis (isolates:1; rSTs:1)
          • Bombella saccharophila (isolates:1; rSTs:1)
          • Bombella sp. (isolates:3; rSTs:3)
        • Brytella (isolates:2; rSTs:1)
          • Brytella acorum (isolates:2; rSTs:1)
        • Commensalibacter (isolates:43; rSTs:28)
          • Commensalibacter communis (isolates:10; rSTs:5)
          • Commensalibacter intestini (isolates:2; rSTs:2)
          • Commensalibacter melissae (isolates:11; rSTs:10)
          • Commensalibacter nepenthis (isolates:1; rSTs:1)
          • Commensalibacter oyaizuii (isolates:1; rSTs:1)
          • Commensalibacter papalotli (ex Botero et al. 2024) (isolates:2; rSTs:2)
          • Commensalibacter papalotli (ex Servin-Garciduenas et al. 2014) (isolates:1; rSTs:1)
          • Commensalibacter sp. (isolates:15; rSTs:6)
        • Craurococcus (isolates:1; rSTs:1)
          • Craurococcus roseus (isolates:1; rSTs:1)
        • Endobacter (isolates:3; rSTs:1)
          • Endobacter medicaginis (isolates:3; rSTs:1)
        • Entomobacter (isolates:1; rSTs:1)
          • Entomobacter blattae (isolates:1; rSTs:1)
        • Formicincola (isolates:1; rSTs:1)
          • Formicincola oecophyllae (isolates:1; rSTs:1)
        • Gluconacetobacter (isolates:32; rSTs:19)
          • Gluconacetobacter aggeris (isolates:1; rSTs:1)
          • Gluconacetobacter asukensis (isolates:2; rSTs:1)
          • Gluconacetobacter azotocaptans (isolates:3; rSTs:2)
          • Gluconacetobacter diazotrophicus (isolates:4; rSTs:4)
          • Gluconacetobacter dulcium (isolates:3; rSTs:2)
          • Gluconacetobacter entanii (isolates:8; rSTs:3)
          • Gluconacetobacter johannae (isolates:2; rSTs:1)
          • Gluconacetobacter liquefaciens (isolates:3; rSTs:1)
          • Gluconacetobacter sacchari (isolates:2; rSTs:1)
          • Gluconacetobacter takamatsuzukensis (isolates:1; rSTs:1)
          • Gluconacetobacter tumulicola (isolates:2; rSTs:1)
          • Gluconacetobacter tumulisoli (isolates:1; rSTs:1)
        • Gluconobacter (isolates:137; rSTs:95)
          • Gluconobacter aidae (isolates:1; rSTs:1)
          • Gluconobacter albidus (isolates:9; rSTs:6)
          • Gluconobacter cadivus (isolates:2; rSTs:2)
          • Gluconobacter cerevisiae (isolates:2; rSTs:1)
          • Gluconobacter cerinus (isolates:21; rSTs:17)
          • Gluconobacter frateurii (isolates:4; rSTs:2)
          • Gluconobacter japonicus (isolates:11; rSTs:6)
          • Gluconobacter kanchanaburiensis (isolates:3; rSTs:1)
          • Gluconobacter kondonii (isolates:11; rSTs:9)
          • Gluconobacter morbifer (isolates:1; rSTs:1)
          • Gluconobacter oxydans (isolates:17; rSTs:13)
          • Gluconobacter potus (isolates:2; rSTs:2)
          • Gluconobacter roseus (isolates:4; rSTs:2)
          • Gluconobacter sp. (isolates:22; rSTs:17)
          • Gluconobacter sphaericus (isolates:9; rSTs:5)
          • Gluconobacter thailandicus (isolates:9; rSTs:4)
          • Gluconobacter vitians (isolates:1; rSTs:1)
          • Gluconobacter wancherniae (isolates:8; rSTs:5)
        • Granulibacter (isolates:10; rSTs:8)
          • Granulibacter bethesdensis (isolates:10; rSTs:8)
        • Komagataeibacter (isolates:67; rSTs:48)
          • Komagataeibacter diospyri (isolates:2; rSTs:2)
          • Komagataeibacter europaeus (isolates:8; rSTs:7)
          • Komagataeibacter intermedius (isolates:5; rSTs:3)
          • Komagataeibacter kakiaceti (isolates:2; rSTs:1)
          • Komagataeibacter medellinensis (isolates:2; rSTs:2)
          • Komagataeibacter melaceti (isolates:1; rSTs:1)
          • Komagataeibacter melomenusus (isolates:2; rSTs:1)
          • Komagataeibacter nataicola (isolates:5; rSTs:3)
          • Komagataeibacter oboediens (isolates:10; rSTs:8)
          • Komagataeibacter rhaeticus (isolates:8; rSTs:5)
          • Komagataeibacter saccharivorans (isolates:5; rSTs:4)
          • Komagataeibacter sp. (isolates:3; rSTs:4)
          • Komagataeibacter sucrofermentans (isolates:5; rSTs:1)
          • Komagataeibacter swingsii (isolates:3; rSTs:2)
          • Komagataeibacter xylinus (isolates:6; rSTs:4)
        • Kozakia (isolates:6; rSTs:4)
          • Kozakia baliensis (isolates:6; rSTs:4)
        • Lichenicoccus (isolates:1; rSTs:1)
          • Lichenicoccus roseus (isolates:1; rSTs:1)
        • Lichenicola (isolates:1; rSTs:1)
          • Lichenicola cladoniae (isolates:1; rSTs:1)
        • Limobrevibacterium (isolates:1; rSTs:1)
          • Limobrevibacterium gyesilva (isolates:1; rSTs:1)
        • Neoasaia (isolates:3; rSTs:1)
          • Neoasaia chiangmaiensis (isolates:3; rSTs:1)
        • Neokomagataea (isolates:3; rSTs:3)
          • Neokomagataea anthophila (isolates:1; rSTs:1)
          • Neokomagataea tanensis (isolates:1; rSTs:1)
          • Neokomagataea thailandica (isolates:1; rSTs:1)
        • Neoroseomonas (isolates:11; rSTs:10)
          • Neoroseomonas alba (isolates:1; rSTs:1)
          • Neoroseomonas alkaliterrae (isolates:2; rSTs:2)
          • Neoroseomonas eburnea (isolates:1; rSTs:1)
          • Neoroseomonas lacus (isolates:1; rSTs:1)
          • Neoroseomonas marina (isolates:1; rSTs:1)
          • Neoroseomonas nitratireducens (isolates:1; rSTs:1)
          • Neoroseomonas oryzicola (isolates:2; rSTs:1)
          • Neoroseomonas soli (isolates:1; rSTs:1)
          • Neoroseomonas terrae (isolates:1; rSTs:1)
        • Nguyenibacter (isolates:3; rSTs:3)
          • Nguyenibacter sp. (isolates:1; rSTs:1)
          • Nguyenibacter vanlangensis (isolates:2; rSTs:2)
        • Novacetimonas (isolates:22; rSTs:13)
          • Novacetimonas cocois (isolates:1; rSTs:1)
          • Novacetimonas hansenii (isolates:15; rSTs:8)
          • Novacetimonas maltaceti (isolates:2; rSTs:1)
          • Novacetimonas pomaceti (isolates:3; rSTs:2)
          • Novacetimonas sp. (isolates:1; rSTs:1)
        • Oecophyllibacter (isolates:3; rSTs:3)
          • Oecophyllibacter saccharovorans (isolates:3; rSTs:3)
        • Oleomonas (isolates:1; rSTs:1)
          • Oleomonas cavernae (isolates:1; rSTs:1)
        • Paeniroseomonas (isolates:1; rSTs:1)
          • Paeniroseomonas aquatica (isolates:1; rSTs:1)
        • Pararoseomonas (isolates:3; rSTs:3)
          • Pararoseomonas baculiformis (isolates:1; rSTs:1)
          • Pararoseomonas indoligenes (isolates:1; rSTs:1)
          • Pararoseomonas sp. (isolates:1; rSTs:1)
        • Parasaccharibacter (isolates:10; rSTs:8)
          • Parasaccharibacter apium (isolates:5; rSTs:3)
          • Parasaccharibacter sp. (isolates:5; rSTs:5)
        • Plastoroseomonas (isolates:3; rSTs:3)
          • Plastoroseomonas arctica (isolates:1; rSTs:1)
          • Plastoroseomonas hellenica (isolates:2; rSTs:2)
        • Pseudoroseomonas (isolates:14; rSTs:13)
          • Pseudoroseomonas aerophila (isolates:1; rSTs:1)
          • Pseudoroseomonas aestuarii (isolates:1; rSTs:1)
          • Pseudoroseomonas cervicalis (isolates:3; rSTs:3)
          • Pseudoroseomonas coralli (isolates:1; rSTs:1)
          • Pseudoroseomonas deserti (isolates:1; rSTs:1)
          • Pseudoroseomonas ludipueritiae (isolates:1; rSTs:1)
          • Pseudoroseomonas oryzae (isolates:1; rSTs:1)
          • Pseudoroseomonas rhizosphaerae (isolates:1; rSTs:1)
          • Pseudoroseomonas vastitatis (isolates:2; rSTs:2)
          • Pseudoroseomonas wenyumeiae (isolates:2; rSTs:1)
        • Rhodopila (isolates:1; rSTs:1)
          • Rhodopila globiformis (isolates:1; rSTs:1)
        • Rhodovastum (isolates:2; rSTs:1)
          • Rhodovastum atsumiense (isolates:2; rSTs:1)
        • Sabulicella (isolates:1; rSTs:1)
          • Sabulicella rubraurantiaca (isolates:1; rSTs:1)
        • Saccharibacter (isolates:5; rSTs:3)
          • Saccharibacter floricola (isolates:2; rSTs:1)
          • Saccharibacter sp. (isolates:3; rSTs:2)
        • Swaminathania (isolates:2; rSTs:1)
          • Swaminathania salitolerans (isolates:2; rSTs:1)
        • Swingsia (isolates:1; rSTs:1)
          • Swingsia samuiensis (isolates:1; rSTs:1)
        • Tanticharoenia (isolates:2; rSTs:1)
          • Tanticharoenia sakaeratensis (isolates:2; rSTs:1)
      • Acidocellaceae (isolates:27; rSTs:22)
        • Acidiphilium (isolates:14; rSTs:11)
          • Acidiphilium acidophilum (isolates:2; rSTs:2)
          • Acidiphilium angustum (isolates:1; rSTs:1)
          • Acidiphilium cryptum (isolates:1; rSTs:1)
          • Acidiphilium iwatense (isolates:1; rSTs:1)
          • Acidiphilium multivorum (isolates:2; rSTs:1)
          • Acidiphilium rubrum (isolates:1; rSTs:1)
          • Acidiphilium sp. (isolates:6; rSTs:4)
        • Acidisoma (isolates:3; rSTs:5)
          • Acidisoma cellulosilyticum (isolates:1; rSTs:1)
          • Acidisoma silvae (isolates:1; rSTs:1)
          • Acidisoma sp. (isolates:1; rSTs:3)
        • Acidocella (isolates:10; rSTs:6)
          • Acidocella aminolytica (isolates:3; rSTs:1)
          • Acidocella aquatica (isolates:1; rSTs:1)
          • Acidocella aromatica (isolates:1; rSTs:1)
          • Acidocella facilis (isolates:2; rSTs:1)
          • Acidocella sp. (isolates:3; rSTs:2)
      • Elioraeaceae (isolates:5; rSTs:5)
        • Elioraea (isolates:5; rSTs:5)
          • Elioraea rosea (isolates:1; rSTs:1)
          • Elioraea sp. (isolates:1; rSTs:1)
          • Elioraea tepida (isolates:1; rSTs:1)
          • Elioraea tepidiphila (isolates:1; rSTs:1)
          • Elioraea thermophila (isolates:1; rSTs:1)
      • Roseomonadaceae (isolates:92; rSTs:73)
        • Belnapia (isolates:6; rSTs:6)
          • Belnapia arida (isolates:1; rSTs:1)
          • Belnapia moabensis (isolates:1; rSTs:1)
          • Belnapia mucosa (isolates:1; rSTs:1)
          • Belnapia rosea (isolates:2; rSTs:2)
          • Belnapia sp. (isolates:1; rSTs:1)
        • Caldovatus (isolates:2; rSTs:2)
          • Caldovatus aquaticus (isolates:1; rSTs:1)
          • Caldovatus sediminis (isolates:1; rSTs:1)
        • Crenalkalicoccus (isolates:1; rSTs:1)
          • Crenalkalicoccus roseus (isolates:1; rSTs:1)
        • Dankookia (isolates:1; rSTs:1)
          • Dankookia rubra (isolates:1; rSTs:1)
        • Falsiroseomonas (isolates:9; rSTs:6)
          • Falsiroseomonas algicola (isolates:1; rSTs:1)
          • Falsiroseomonas bella (isolates:1; rSTs:1)
          • Falsiroseomonas frigidaquae (isolates:2; rSTs:1)
          • Falsiroseomonas oryzae (isolates:1)
          • Falsiroseomonas oryziterrae (isolates:1)
          • Falsiroseomonas selenitidurans (isolates:1; rSTs:1)
          • Falsiroseomonas stagni (isolates:1; rSTs:1)
          • Falsiroseomonas tokyonensis (isolates:1; rSTs:1)
        • Humitalea (isolates:1; rSTs:1)
          • Humitalea rosea (isolates:1; rSTs:1)
        • Paracraurococcus (isolates:2; rSTs:1)
          • Paracraurococcus ruber (isolates:2; rSTs:1)
        • Rhodovarius (isolates:2; rSTs:2)
          • Rhodovarius crocodyli (isolates:1; rSTs:1)
          • Rhodovarius lipocyclicus (isolates:1; rSTs:1)
        • Roseicella (isolates:4; rSTs:4)
          • Roseicella aerolata (isolates:1; rSTs:1)
          • Roseicella aquatilis (isolates:1; rSTs:1)
          • Roseicella frigidaeris (isolates:1; rSTs:1)
          • Roseicella sp. (isolates:1; rSTs:1)
        • Roseococcus (isolates:6; rSTs:5)
          • Roseococcus microcysteis (isolates:1; rSTs:1)
          • Roseococcus pinisoli (isolates:1; rSTs:1)
          • Roseococcus sp. (isolates:1; rSTs:1)
          • Roseococcus suduntuyensis (isolates:2; rSTs:1)
          • Roseococcus thiosulfatophilus (isolates:1; rSTs:1)
        • Roseomonas (isolates:50; rSTs:38)
          • Roseomonas acroporae (isolates:1; rSTs:1)
          • Roseomonas aerilata (isolates:1; rSTs:1)
          • Roseomonas fluvialis (isolates:1; rSTs:1)
          • Roseomonas gilardii (isolates:6; rSTs:5)
          • Roseomonas haemaphysalidis (isolates:2; rSTs:1)
          • Roseomonas harenae (isolates:1; rSTs:1)
          • Roseomonas marmotae (isolates:2; rSTs:2)
          • Roseomonas mucosa (isolates:21; rSTs:15)
          • Roseomonas nepalensis (isolates:1; rSTs:1)
          • Roseomonas oleicola (isolates:1; rSTs:1)
          • Roseomonas pecuniae (isolates:1; rSTs:1)
          • Roseomonas ponticola (isolates:1; rSTs:1)
          • Roseomonas populi (isolates:1)
          • Roseomonas rosea (isolates:1; rSTs:1)
          • Roseomonas rosulenta (isolates:1)
          • Roseomonas rubea (isolates:1; rSTs:1)
          • Roseomonas sp. (isolates:7; rSTs:5)
        • Rubritepida (isolates:1; rSTs:1)
          • Rubritepida flocculans (isolates:1; rSTs:1)
        • Sediminicoccus (isolates:2; rSTs:2)
          • Sediminicoccus rosea (isolates:1; rSTs:1)
          • Sediminicoccus sp. (isolates:1; rSTs:1)
        • Siccirubricoccus (isolates:5; rSTs:3)
          • Siccirubricoccus deserti (isolates:2; rSTs:1)
          • Siccirubricoccus phaeus (isolates:1; rSTs:1)
          • Siccirubricoccus soli (isolates:2; rSTs:1)
    • Candidatus Pelagibacterales (isolates:16; rSTs:14 tree)
      • Candidatus Pelagibacteraceae (isolates:15; rSTs:13 tree)
        • Candidatus Pelagibacter (isolates:15; rSTs:13 tree)
          • Candidatus Pelagibacter giovannonii (isolates:1; rSTs:1)
          • Candidatus Pelagibacter sp. (isolates:8; rSTs:6 tree)
          • Candidatus Pelagibacter ubique (isolates:6; rSTs:6 tree)
    • Candidatus Puniceispirillales (isolates:1; rSTs:1)
      • Candidatus Puniceispirillaceae (isolates:1; rSTs:1)
        • Candidatus Puniceispirillum (isolates:1; rSTs:1)
          • Candidatus Puniceispirillum marinum (isolates:1; rSTs:1)
    • Caulobacterales (isolates:258; rSTs:223 tree)
      • Caulobacteraceae (isolates:257; rSTs:222 tree)
        • Aquidulcibacter (isolates:1; rSTs:1)
          • Aquidulcibacter paucihalophilus (isolates:1; rSTs:1)
        • Asticcacaulis (isolates:26; rSTs:24 tree)
          • Asticcacaulis aquaticus (isolates:1; rSTs:1)
          • Asticcacaulis benevestitus (isolates:2; rSTs:1)
          • Asticcacaulis biprosthecium (isolates:1; rSTs:1)
          • Asticcacaulis currens (isolates:1; rSTs:1)
          • Asticcacaulis endophyticus (isolates:1; rSTs:1)
          • Asticcacaulis excentricus (isolates:2; rSTs:1)
          • Asticcacaulis machinosus (isolates:1; rSTs:1)
          • Asticcacaulis solisilvae (isolates:1; rSTs:1)
          • Asticcacaulis sp. (isolates:14; rSTs:14 tree)
          • Asticcacaulis taihuensis (isolates:1; rSTs:1)
          • Asticcacaulis tiandongensis (isolates:1; rSTs:1)
        • Brevundimonas (isolates:132; rSTs:116 tree)
          • Brevundimonas abyssalis (isolates:1)
          • Brevundimonas alba (isolates:1; rSTs:1)
          • Brevundimonas albigilva (isolates:2; rSTs:2)
          • Brevundimonas aurantiaca (isolates:10; rSTs:6 tree)
          • Brevundimonas aveniformis (isolates:1; rSTs:1)
          • Brevundimonas bacteroides (isolates:1; rSTs:1)
          • Brevundimonas basaltis (isolates:2; rSTs:1)
          • Brevundimonas bullata (isolates:4; rSTs:2)
          • Brevundimonas denitrificans (isolates:1; rSTs:1)
          • Brevundimonas diminuta (isolates:13; rSTs:9 tree)
          • Brevundimonas faecalis (isolates:1; rSTs:1)
          • Brevundimonas fluminis (isolates:1; rSTs:1)
          • Brevundimonas fontaquae (isolates:1; rSTs:1)
          • Brevundimonas goettingensis (isolates:1; rSTs:1)
          • Brevundimonas guildfordensis (isolates:1; rSTs:1)
          • Brevundimonas halotolerans (isolates:2; rSTs:1)
          • Brevundimonas huaxiensis (isolates:1; rSTs:1)
          • Brevundimonas intermedia (isolates:2; rSTs:2)
          • Brevundimonas kwangchunensis (isolates:1; rSTs:1)
          • Brevundimonas lenta (isolates:2; rSTs:1)
          • Brevundimonas lutea (isolates:1; rSTs:1)
          • Brevundimonas mediterranea (isolates:2; rSTs:2)
          • Brevundimonas naejangsanensis (isolates:5; rSTs:5 tree)
          • Brevundimonas nasdae (isolates:5; rSTs:2)
          • Brevundimonas olei (isolates:2; rSTs:2)
          • Brevundimonas pishanensis (isolates:1; rSTs:1)
          • Brevundimonas poindexterae (isolates:1; rSTs:1)
          • Brevundimonas pondensis (isolates:2; rSTs:2)
          • Brevundimonas sp. (isolates:49; rSTs:51 tree)
          • Brevundimonas subvibrioides (isolates:2; rSTs:2)
          • Brevundimonas terrae (isolates:2; rSTs:1)
          • Brevundimonas vancanneytii (isolates:1; rSTs:1)
          • Brevundimonas variabilis (isolates:1; rSTs:1)
          • Brevundimonas vesicularis (isolates:7; rSTs:7 tree)
          • Brevundimonas viscosa (isolates:1; rSTs:1)
          • Brevundimonas vitisensis (isolates:1; rSTs:1)
        • Caulobacter (isolates:72; rSTs:61 tree)
          • Caulobacter endophyticus (isolates:1; rSTs:1)
          • Caulobacter flavus (isolates:2; rSTs:1)
          • Caulobacter ginsengisoli (isolates:1; rSTs:1)
          • Caulobacter henricii (isolates:1; rSTs:2)
          • Caulobacter hibisci (isolates:1; rSTs:1)
          • Caulobacter mirabilis (isolates:1; rSTs:1)
          • Caulobacter radicis (isolates:2; rSTs:2)
          • Caulobacter rhizosphaerae (isolates:4; rSTs:3 tree)
          • Caulobacter segnis (isolates:3; rSTs:2)
          • Caulobacter soli (isolates:1; rSTs:1)
          • Caulobacter sp. (isolates:45; rSTs:41 tree)
          • Caulobacter vibrioides (isolates:9; rSTs:4 tree)
          • Caulobacter zeae (isolates:1; rSTs:1)
        • Peiella (isolates:1)
          • Peiella sedimenti (isolates:1)
        • Phenylobacterium (isolates:23; rSTs:19 tree)
          • Phenylobacterium aquaticum (isolates:1; rSTs:1)
          • Phenylobacterium deserti (isolates:1; rSTs:1)
          • Phenylobacterium glaciei (isolates:1; rSTs:1)
          • Phenylobacterium haematophilum (isolates:1; rSTs:1)
          • Phenylobacterium hankyongense (isolates:1; rSTs:1)
          • Phenylobacterium immobile (isolates:1; rSTs:1)
          • Phenylobacterium koreense (isolates:1; rSTs:1)
          • Phenylobacterium kunshanense (isolates:1; rSTs:1)
          • Phenylobacterium montanum (isolates:1; rSTs:1)
          • Phenylobacterium parvum (isolates:1; rSTs:1)
          • Phenylobacterium soli (isolates:1; rSTs:1)
          • Phenylobacterium sp. (isolates:11; rSTs:7 tree)
          • Phenylobacterium zucineum (isolates:1; rSTs:1)
        • Pseudaquidulcibacter (isolates:1; rSTs:1)
          • Pseudaquidulcibacter saccharophilus (isolates:1; rSTs:1)
        • Terricaulis (isolates:1)
          • Terricaulis silvestris (isolates:1)
    • Emcibacterales (isolates:7; rSTs:5 tree)
      • Emcibacteraceae (isolates:6; rSTs:4 tree)
        • Emcibacter (isolates:1; rSTs:1)
          • Emcibacter nanhaiensis (isolates:1; rSTs:1)
        • Luteithermobacter (isolates:1; rSTs:1)
          • Luteithermobacter gelatinilyticus (isolates:1; rSTs:1)
        • Paremcibacter (isolates:2; rSTs:1)
          • Paremcibacter congregatus (isolates:2; rSTs:1)
        • Pseudemcibacter (isolates:2; rSTs:1)
          • Pseudemcibacter aquimaris (isolates:2; rSTs:1)
      • Govaniaceae (isolates:1; rSTs:1)
        • Govania (isolates:1; rSTs:1)
          • Govania unica (isolates:1; rSTs:1)
    • Futianiales (isolates:1; rSTs:1)
      • Futianiaceae (isolates:1; rSTs:1)
        • Futiania (isolates:1; rSTs:1)
          • Futiania mangrovi (isolates:1; rSTs:1)
    • Geminicoccales (isolates:12; rSTs:10 tree)
      • Geminicoccaceae (isolates:12; rSTs:10 tree)
        • Arboricoccus (isolates:1; rSTs:1)
          • Arboricoccus pini (isolates:1; rSTs:1)
        • Geminicoccus (isolates:4; rSTs:3 tree)
          • Geminicoccus flavidas (isolates:1; rSTs:1)
          • Geminicoccus harenae (isolates:2; rSTs:1)
          • Geminicoccus roseus (isolates:1; rSTs:1)
        • Marinimicrococcus (isolates:1)
          • Marinimicrococcus flavescens (isolates:1)
        • Tistrella (isolates:6; rSTs:6 tree)
          • Tistrella bauzanensis (isolates:1; rSTs:1)
          • Tistrella mobilis (isolates:3; rSTs:3 tree)
          • Tistrella sp. (isolates:2; rSTs:2)
    • Holosporales (isolates:20; rSTs:12 tree)
      • Caedimonadaceae (isolates:3; rSTs:3 tree)
        • Caedimonas (isolates:1; rSTs:1)
          • Caedimonas varicaedens (isolates:1; rSTs:1)
        • Candidatus Nucleicultrix (isolates:1; rSTs:1)
          • Candidatus Nucleicultrix amoebiphila (isolates:1; rSTs:1)
        • Candidatus Paracaedimonas (isolates:1; rSTs:1)
          • Candidatus Paracaedimonas acanthamoebae (isolates:1; rSTs:1)
      • Candidatus Paracaedibacteraceae (isolates:4; rSTs:4 tree)
        • Candidatus Finniella (isolates:1; rSTs:1)
          • Candidatus Finniella inopinata (isolates:1; rSTs:1)
        • Candidatus Odyssella (isolates:1; rSTs:1)
          • Candidatus Odyssella thessalonicensis (isolates:1; rSTs:1)
        • Candidatus Paracaedibacter (isolates:2; rSTs:2)
          • Candidatus Paracaedibacter acanthamoebae (isolates:1; rSTs:1)
          • Candidatus Paracaedibacter symbiosus (isolates:1; rSTs:1)
      • Holosporaceae (isolates:13; rSTs:5 tree)
        • Candidatus Bealeia (isolates:2)
          • Candidatus Bealeia paramacronuclearis (isolates:2)
        • Candidatus Cytomitobacter (isolates:3)
          • Candidatus Cytomitobacter indipagum (isolates:1)
          • Candidatus Cytomitobacter primus (isolates:2)
        • Candidatus Hepatobacter (isolates:1; rSTs:1)
          • Candidatus Hepatobacter penaei (isolates:1; rSTs:1)
        • Candidatus Hydrogenosomobacter (isolates:1)
          • Candidatus Hydrogenosomobacter endosymbioticus (isolates:1)
        • Candidatus Nesciobacter (isolates:2)
          • Candidatus Nesciobacter abundans (isolates:2)
        • Holospora (isolates:4; rSTs:4 tree)
          • Holospora curviuscula (isolates:1; rSTs:1)
          • Holospora elegans (isolates:1; rSTs:1)
          • Holospora obtusa (isolates:1; rSTs:1)
          • Holospora undulata (isolates:1; rSTs:1)
    • Hyphomicrobiales (isolates:7206; rSTs:4436)
      • Aestuariivirgaceae (isolates:1; rSTs:1)
        • Aestuariivirga (isolates:1; rSTs:1)
          • Aestuariivirga litoralis (isolates:1; rSTs:1)
      • Afifellaceae (isolates:11; rSTs:7 tree)
        • Afifella (isolates:10; rSTs:6 tree)
          • Afifella aestuarii (isolates:1; rSTs:1)
          • Afifella marina (isolates:5; rSTs:2)
          • Afifella pfennigii (isolates:1; rSTs:1)
          • Afifella sp. (isolates:3; rSTs:2)
        • Faunimonas (isolates:1; rSTs:1)
          • Faunimonas pinastri (isolates:1; rSTs:1)
      • Ahrensiaceae (isolates:16; rSTs:12 tree)
        • Ahrensia (isolates:4; rSTs:3 tree)
          • Ahrensia kielensis (isolates:2; rSTs:1)
          • Ahrensia marina (isolates:1; rSTs:1)
          • Ahrensia sp. (isolates:1; rSTs:1)
        • Oceaniradius (isolates:3; rSTs:3 tree)
          • Oceaniradius stylonematis (isolates:3; rSTs:3 tree)
        • Oricola (isolates:5; rSTs:4 tree)
          • Oricola cellulosilytica (isolates:2; rSTs:1)
          • Oricola indica (isolates:1; rSTs:1)
          • Oricola nitratireducens (isolates:1; rSTs:1)
          • Oricola thermophila (isolates:1; rSTs:1)
        • Roseitalea (isolates:4; rSTs:2)
          • Roseitalea porphyridii (isolates:1; rSTs:1)
          • Roseitalea sp. (isolates:3; rSTs:1)
      • Alsobacteraceae (isolates:3; rSTs:3 tree)
        • Alsobacter (isolates:3; rSTs:3 tree)
          • Alsobacter metallidurans (isolates:1; rSTs:1)
          • Alsobacter ponti (isolates:1; rSTs:1)
          • Alsobacter soli (isolates:1; rSTs:1)
      • Amorphaceae (isolates:11; rSTs:10 tree)
        • Acuticoccus (isolates:8; rSTs:7 tree)
          • Acuticoccus kalidii (isolates:1; rSTs:1)
          • Acuticoccus mangrovi (isolates:1; rSTs:1)
          • Acuticoccus sediminis (isolates:2; rSTs:2)
          • Acuticoccus sp. (isolates:2; rSTs:2)
          • Acuticoccus yangtzensis (isolates:2; rSTs:1)
        • Amorphus (isolates:3; rSTs:3 tree)
          • Amorphus coralli (isolates:1; rSTs:1)
          • Amorphus orientalis (isolates:1; rSTs:1)
          • Amorphus sp. (isolates:1; rSTs:1)
      • Ancalomicrobiaceae (isolates:4; rSTs:3 tree)
        • Pinisolibacter (isolates:2; rSTs:1)
          • Pinisolibacter aquiterrae (isolates:2; rSTs:1)
        • Prosthecodimorpha (isolates:1; rSTs:1)
          • Prosthecodimorpha staleyi (isolates:1; rSTs:1)
        • Siculibacillus (isolates:1; rSTs:1)
          • Siculibacillus lacustris (isolates:1; rSTs:1)
      • Aurantimonadaceae (isolates:97; rSTs:77 tree)
        • Antarcticirhabdus (isolates:1; rSTs:1)
          • Antarcticirhabdus aurantiaca (isolates:1; rSTs:1)
        • Aurantimonas (isolates:21; rSTs:12 tree)
          • Aurantimonas aggregata (isolates:1; rSTs:1)
          • Aurantimonas coralicida (isolates:4; rSTs:3 tree)
          • Aurantimonas endophytica (isolates:2; rSTs:1)
          • Aurantimonas manganoxydans (isolates:2; rSTs:1)
          • Aurantimonas marianensis (isolates:1)
          • Aurantimonas marina (isolates:1; rSTs:1)
          • Aurantimonas sp. (isolates:10; rSTs:5 tree)
        • Aureimonas (isolates:41; rSTs:33 tree)
          • Aureimonas altamirensis (isolates:7; rSTs:5 tree)
          • Aureimonas endophytica (isolates:1; rSTs:1)
          • Aureimonas flava (isolates:1; rSTs:1)
          • Aureimonas fodinaquatilis (isolates:1; rSTs:1)
          • Aureimonas frigidaquae (isolates:1; rSTs:1)
          • Aureimonas glaciei (isolates:1; rSTs:1)
          • Aureimonas jatrophae (isolates:2; rSTs:1)
          • Aureimonas leprariae (isolates:1; rSTs:1)
          • Aureimonas mangrovi (isolates:1; rSTs:1)
          • Aureimonas phyllosphaerae (isolates:3; rSTs:1)
          • Aureimonas populi (isolates:1; rSTs:1)
          • Aureimonas psammosilenae (isolates:1; rSTs:1)
          • Aureimonas pseudogalii (isolates:1; rSTs:1)
          • Aureimonas sp. (isolates:16; rSTs:14 tree)
          • Aureimonas ureilytica (isolates:3; rSTs:2)
        • Consotaella (isolates:2; rSTs:2)
          • Consotaella salsifontis (isolates:1; rSTs:1)
          • Consotaella sp. (isolates:1; rSTs:1)
        • Fulvimarina (isolates:7; rSTs:6 tree)
          • Fulvimarina endophytica (isolates:1; rSTs:1)
          • Fulvimarina manganoxydans (isolates:1; rSTs:1)
          • Fulvimarina pelagi (isolates:2; rSTs:1)
          • Fulvimarina sp. (isolates:3; rSTs:3 tree)
        • Jiella (isolates:9; rSTs:8 tree)
          • Jiella avicenniae (isolates:1; rSTs:1)
          • Jiella endophytica (isolates:1; rSTs:1)
          • Jiella flava (isolates:2; rSTs:1)
          • Jiella mangrovi (isolates:1; rSTs:1)
          • Jiella pacifica (isolates:1; rSTs:1)
          • Jiella pelagia (isolates:1; rSTs:1)
          • Jiella sonneratiae (isolates:1; rSTs:1)
          • Jiella sp. (isolates:1; rSTs:1 tree)
        • Mangrovicella (isolates:1; rSTs:1)
          • Mangrovicella endophytica (isolates:1; rSTs:1)
        • Martelella (isolates:15; rSTs:14 tree)
          • Martelella alba (isolates:1; rSTs:1)
          • Martelella endophytica (isolates:1; rSTs:1)
          • Martelella limonii (isolates:1; rSTs:1)
          • Martelella lutilitoris (isolates:2; rSTs:2)
          • Martelella mangrovi (isolates:1; rSTs:1)
          • Martelella mediterranea (isolates:3; rSTs:2)
          • Martelella radicis (isolates:1; rSTs:1)
          • Martelella sp. (isolates:5; rSTs:5 tree)
      • Bartonellaceae (isolates:298; rSTs:192 tree)
        • Bartonella (isolates:297; rSTs:191 tree)
          • Bartonella acomydis (isolates:1; rSTs:1)
          • Bartonella alsatica (isolates:4; rSTs:1)
          • Bartonella ancashensis (isolates:1; rSTs:1)
          • Bartonella apihabitans (isolates:7; rSTs:7 tree)
          • Bartonella apis (isolates:7; rSTs:7 tree)
          • Bartonella australis (isolates:10; rSTs:1)
          • Bartonella bacilliformis (isolates:17; rSTs:9 tree)
          • Bartonella birtlesii (isolates:5; rSTs:3 tree)
          • Bartonella bovis (isolates:7; rSTs:3 tree)
          • Bartonella callosciuri (isolates:1; rSTs:1)
          • Bartonella capreoli (isolates:1; rSTs:1)
          • Bartonella choladocola (isolates:3; rSTs:3 tree)
          • Bartonella chomelii (isolates:2; rSTs:1)
          • Bartonella clarridgeiae (isolates:2; rSTs:2)
          • Bartonella doshiae (isolates:9; rSTs:3 tree)
          • Bartonella elizabethae (isolates:7; rSTs:3 tree)
          • Bartonella florencae (isolates:1; rSTs:1)
          • Bartonella fuyuanensis (isolates:1; rSTs:1)
          • Bartonella gabonensis (isolates:1; rSTs:1)
          • Bartonella gliris (isolates:1; rSTs:1)
          • Bartonella grahamii (isolates:8; rSTs:7 tree)
          • Bartonella harrusi (isolates:1; rSTs:1)
          • Bartonella henselae (isolates:55; rSTs:26 tree)
          • Bartonella jaculi (isolates:1; rSTs:1)
          • Bartonella japonica (isolates:1; rSTs:1)
          • Bartonella koehlerae (isolates:2; rSTs:1)
          • Bartonella kosoyi (isolates:1; rSTs:1)
          • Bartonella krasnovii (isolates:15; rSTs:12 tree)
          • Bartonella machadoae (isolates:1; rSTs:1)
          • Bartonella massiliensis (isolates:1; rSTs:1)
          • Bartonella mastomydis (isolates:1; rSTs:1)
          • Bartonella melophagi (isolates:1; rSTs:1)
          • Bartonella pachyuromydis (isolates:1; rSTs:1)
          • Bartonella phoceensis (isolates:1; rSTs:1)
          • Bartonella queenslandensis (isolates:2; rSTs:2)
          • Bartonella quintana (isolates:24; rSTs:12 tree)
          • Bartonella raoultii (isolates:1; rSTs:1)
          • Bartonella rattaustraliani (isolates:1; rSTs:1)
          • Bartonella rattimassiliensis (isolates:2; rSTs:1)
          • Bartonella refiksaydamii (isolates:1; rSTs:1)
          • Bartonella rochalimae (isolates:1; rSTs:1)
          • Bartonella saheliensis (isolates:1; rSTs:1)
          • Bartonella schoenbuchensis (isolates:3; rSTs:2)
          • Bartonella senegalensis (isolates:1; rSTs:1)
          • Bartonella silvatica (isolates:1; rSTs:1)
          • Bartonella sp. (isolates:48; rSTs:36 tree)
          • Bartonella tamiae (isolates:2; rSTs:2)
          • Bartonella taylorii (isolates:9; rSTs:6 tree)
          • Bartonella tribocorum (isolates:8; rSTs:5 tree)
          • Bartonella vinsonii (isolates:10; rSTs:9 tree)
          • Bartonella washoeensis (isolates:4; rSTs:2)
        • Limoniibacter (isolates:1; rSTs:1)
          • Limoniibacter endophyticus (isolates:1; rSTs:1)
      • Beijerinckiaceae (isolates:15; rSTs:13 tree)
        • Beijerinckia (isolates:3; rSTs:2)
          • Beijerinckia indica (isolates:2; rSTs:1)
          • Beijerinckia mobilis (isolates:1; rSTs:1)
        • Methylocapsa (isolates:4; rSTs:4 tree)
          • Methylocapsa acidiphila (isolates:1; rSTs:1)
          • Methylocapsa aurea (isolates:1; rSTs:1)
          • Methylocapsa palsarum (isolates:1; rSTs:1)
          • Methylocapsa sp. (isolates:1; rSTs:1)
        • Methylocella (isolates:4; rSTs:4 tree)
          • Methylocella silvestris (isolates:2; rSTs:2)
          • Methylocella tundrae (isolates:2; rSTs:2)
        • Methyloferula (isolates:1; rSTs:1)
          • Methyloferula stellata (isolates:1; rSTs:1)
        • Methylovirgula (isolates:3; rSTs:2)
          • Methylovirgula ligni (isolates:2; rSTs:1)
          • Methylovirgula sp. (isolates:1; rSTs:1)
      • Blastochloridaceae (isolates:5; rSTs:3 tree)
        • Blastochloris (isolates:5; rSTs:3 tree)
          • Blastochloris sulfoviridis (isolates:1; rSTs:1)
          • Blastochloris tepida (isolates:1; rSTs:1)
          • Blastochloris viridis (isolates:3; rSTs:1)
      • Boseaceae (isolates:68; rSTs:52 tree)
        • Bosea (isolates:68; rSTs:52 tree)
          • Bosea beijingensis (isolates:1; rSTs:1)
          • Bosea caraganae (isolates:2; rSTs:1)
          • Bosea lathyri (isolates:1; rSTs:1)
          • Bosea lupini (isolates:1; rSTs:2)
          • Bosea minatitlanensis (isolates:1; rSTs:1)
          • Bosea psychrotolerans (isolates:1; rSTs:1)
          • Bosea robiniae (isolates:1; rSTs:1)
          • Bosea rubneri (isolates:1; rSTs:1)
          • Bosea sp. (isolates:53; rSTs:38 tree)
          • Bosea spartocytisi (isolates:2; rSTs:1)
          • Bosea thiooxidans (isolates:2; rSTs:2)
          • Bosea vaviloviae (isolates:1; rSTs:1)
          • Bosea vestrisii (isolates:1; rSTs:1)
      • Brucellaceae (isolates:1486; rSTs:360 tree)
        • Brucella (isolates:1456; rSTs:336 tree)
          • Brucella abortus (isolates:412; rSTs:67 tree)
          • Brucella anthropi (isolates:15; rSTs:12 tree)
          • Brucella canis (isolates:47; rSTs:8 tree)
          • Brucella ceti (isolates:6; rSTs:1)
          • Brucella cytisi (isolates:3; rSTs:3 tree)
          • Brucella daejeonensis (isolates:1; rSTs:1)
          • Brucella endophytica (isolates:1; rSTs:1)
          • Brucella gallinifaecis (isolates:1; rSTs:1)
          • Brucella grignonensis (isolates:1; rSTs:1)
          • Brucella haematophila (isolates:1; rSTs:1)
          • Brucella inopinata (isolates:3; rSTs:3 tree)
          • Brucella intermedia (isolates:43; rSTs:37 tree)
          • Brucella lupini (isolates:2; rSTs:1)
          • Brucella melitensis (isolates:708; rSTs:90 tree)
          • Brucella microti (isolates:2; rSTs:1)
          • Brucella neotomae (isolates:6; rSTs:1)
          • Brucella oryzae (isolates:3; rSTs:1)
          • Brucella ovis (isolates:19; rSTs:5 tree)
          • Brucella pecoris (isolates:3; rSTs:1)
          • Brucella pinnipedialis (isolates:7; rSTs:3 tree)
          • Brucella pituitosa (isolates:5; rSTs:4 tree)
          • Brucella pseudintermedia (isolates:8; rSTs:5 tree)
          • Brucella pseudogrignonensis (isolates:10; rSTs:7 tree)
          • Brucella rhizosphaerae (isolates:1; rSTs:1)
          • Brucella sp. (isolates:68; rSTs:59 tree)
          • Brucella suis (isolates:67; rSTs:9 tree)
          • Brucella thiophenivorans (isolates:1; rSTs:1)
          • Brucella tritici (isolates:6; rSTs:6 tree)
          • Brucella vulpis (isolates:2; rSTs:1)
          • [Ochrobactrum] soli (isolates:3; rSTs:3 tree)
          • [Ochrobactrum] teleogrylli (isolates:1; rSTs:1)
        • Falsochrobactrum (isolates:3; rSTs:3 tree)
          • Falsochrobactrum ovis (isolates:1; rSTs:1)
          • Falsochrobactrum shanghaiense (isolates:1; rSTs:1)
          • Falsochrobactrum tianjinense (isolates:1; rSTs:1)
        • Ochrobactrum (isolates:8; rSTs:8 tree)
          • Candidatus Ochrobactrum gambitense (isolates:1; rSTs:1)
          • Ochrobactrum chromiisoli (isolates:1; rSTs:1)
          • Ochrobactrum quorumnocens (isolates:2; rSTs:2)
          • Ochrobactrum sp. (isolates:4; rSTs:4 tree)
        • Paenochrobactrum (isolates:2; rSTs:2)
          • Paenochrobactrum gallinarii (isolates:1; rSTs:1)
          • Paenochrobactrum glaciei (isolates:1; rSTs:1)
        • Pseudochrobactrum (isolates:17; rSTs:11 tree)
          • Pseudochrobactrum algeriensis (isolates:6; rSTs:2)
          • Pseudochrobactrum asaccharolyticum (isolates:2; rSTs:2)
          • Pseudochrobactrum kiredjianiae (isolates:1; rSTs:1)
          • Pseudochrobactrum saccharolyticum (isolates:3; rSTs:2)
          • Pseudochrobactrum sp. (isolates:5; rSTs:4 tree)
      • Chelatococcaceae (isolates:23; rSTs:17 tree)
        • Camelimonas (isolates:2; rSTs:2)
          • Camelimonas fluminis (isolates:1; rSTs:1)
          • Camelimonas lactis (isolates:1; rSTs:1)
        • Chelatococcus (isolates:19; rSTs:13 tree)
          • Chelatococcus albus (isolates:1; rSTs:1)
          • Chelatococcus asaccharovorans (isolates:4; rSTs:2)
          • Chelatococcus caeni (isolates:1; rSTs:1)
          • Chelatococcus composti (isolates:3; rSTs:1)
          • Chelatococcus daeguensis (isolates:2; rSTs:1)
          • Chelatococcus reniformis (isolates:1; rSTs:1)
          • Chelatococcus sambhunathii (isolates:2; rSTs:1)
          • Chelatococcus sp. (isolates:5; rSTs:5 tree)
        • Pseudochelatococcus (isolates:2; rSTs:2)
          • Pseudochelatococcus contaminans (isolates:1; rSTs:1)
          • Pseudochelatococcus lubricantis (isolates:1; rSTs:1)
      • Cohaesibacteraceae (isolates:7; rSTs:6 tree)
        • Cohaesibacter (isolates:7; rSTs:6 tree)
          • Cohaesibacter celericrescens (isolates:1)
          • Cohaesibacter gelatinilyticus (isolates:1; rSTs:1)
          • Cohaesibacter haloalkalitolerans (isolates:1; rSTs:1)
          • Cohaesibacter intestini (isolates:1; rSTs:1)
          • Cohaesibacter marisflavi (isolates:1; rSTs:1)
          • Cohaesibacter sp. (isolates:2; rSTs:2)
      • Coralliovaceae (isolates:1; rSTs:1)
        • Coralliovum (isolates:1; rSTs:1)
          • Coralliovum pocilloporae (isolates:1; rSTs:1)
      • Devosiaceae (isolates:104; rSTs:91 tree)
        • Arsenicitalea (isolates:1; rSTs:1)
          • Arsenicitalea aurantiaca (isolates:1; rSTs:1)
        • Cucumibacter (isolates:2; rSTs:1)
          • Cucumibacter marinus (isolates:2; rSTs:1)
        • Devosia (isolates:75; rSTs:68 tree)
          • Devosia algicola (isolates:1)
          • Devosia aquimaris (isolates:1; rSTs:1)
          • Devosia aurantiaca (isolates:1; rSTs:1)
          • Devosia beringensis (isolates:1; rSTs:1)
          • Devosia chinhatensis (isolates:1; rSTs:1)
          • Devosia crocina (isolates:1; rSTs:1)
          • Devosia elaeis (isolates:1; rSTs:1)
          • Devosia enhydra (isolates:1; rSTs:1)
          • Devosia epidermidihirudinis (isolates:1; rSTs:1)
          • Devosia equisanguinis (isolates:1; rSTs:1)
          • Devosia faecipullorum (isolates:1; rSTs:1)
          • Devosia geojensis (isolates:1; rSTs:1)
          • Devosia ginsengisoli (isolates:1; rSTs:1)
          • Devosia indica (isolates:1; rSTs:1)
          • Devosia insulae (isolates:1; rSTs:1)
          • Devosia lacusdianchii (isolates:1; rSTs:1)
          • Devosia limi (isolates:2; rSTs:1)
          • Devosia litorisediminis (isolates:1; rSTs:1)
          • Devosia lucknowensis (isolates:1; rSTs:1)
          • Devosia marina (isolates:1; rSTs:1)
          • Devosia naphthalenivorans (isolates:1; rSTs:1)
          • Devosia neptuniae (isolates:1; rSTs:1)
          • Devosia nitrariae (isolates:1; rSTs:1)
          • Devosia oryziradicis (isolates:1; rSTs:1)
          • Devosia oryzisoli (isolates:1; rSTs:1)
          • Devosia pacifica (isolates:1; rSTs:1)
          • Devosia psychrophila (isolates:2; rSTs:1)
          • Devosia rhizoryzae (isolates:1; rSTs:1)
          • Devosia rhodophyticola (isolates:1; rSTs:1)
          • Devosia riboflavina (isolates:1; rSTs:1)
          • Devosia salina (isolates:1; rSTs:1)
          • Devosia sediminis (isolates:1; rSTs:1)
          • Devosia soli (isolates:1; rSTs:1)
          • Devosia sp. (isolates:34; rSTs:31 tree)
          • Devosia subaequoris (isolates:2; rSTs:1)
          • Devosia submarina (isolates:1; rSTs:1)
          • Devosia ureilytica (isolates:2; rSTs:2)
          • Devosia yakushimensis (isolates:1; rSTs:1)
        • Mariluticola (isolates:1)
          • Mariluticola halotolerans (isolates:1)
        • Maritalea (isolates:5; rSTs:5 tree)
          • Maritalea mediterranea (isolates:1; rSTs:1)
          • Maritalea mobilis (isolates:1; rSTs:1)
          • Maritalea myrionectae (isolates:2; rSTs:2)
          • Maritalea porphyrae (isolates:1; rSTs:1)
        • Paradevosia (isolates:2; rSTs:2)
          • Paradevosia shaoguanensis (isolates:2; rSTs:2)
        • Pelagibacterium (isolates:16; rSTs:13 tree)
          • Pelagibacterium flavum (isolates:1; rSTs:1)
          • Pelagibacterium halotolerans (isolates:3; rSTs:1)
          • Pelagibacterium lacus (isolates:1; rSTs:1)
          • Pelagibacterium lentulum (isolates:2; rSTs:1)
          • Pelagibacterium limicola (isolates:1; rSTs:1)
          • Pelagibacterium luteolum (isolates:1; rSTs:1)
          • Pelagibacterium montanilacus (isolates:1; rSTs:1)
          • Pelagibacterium nitratireducens (isolates:1; rSTs:1)
          • Pelagibacterium sediminicola (isolates:1; rSTs:1)
          • Pelagibacterium sp. (isolates:3; rSTs:3 tree)
          • Pelagibacterium xiamenense (isolates:1; rSTs:1)
        • Youhaiella (isolates:2; rSTs:1)
          • Youhaiella tibetensis (isolates:2; rSTs:1)
      • Hyphomicrobiaceae (isolates:48; rSTs:39 tree)
        • Dichotomicrobium (isolates:1; rSTs:1)
          • Dichotomicrobium thermohalophilum (isolates:1; rSTs:1)
        • Filomicrobium (isolates:3; rSTs:1)
          • Candidatus Filomicrobium marinum (isolates:2)
          • Filomicrobium insigne (isolates:1; rSTs:1)
        • Hyphomicrobium (isolates:20; rSTs:19 tree)
          • Hyphomicrobium album (isolates:1; rSTs:1)
          • Hyphomicrobium denitrificans (isolates:2; rSTs:2)
          • Hyphomicrobium facile (isolates:1; rSTs:1)
          • Hyphomicrobium methylovorum (isolates:1; rSTs:1)
          • Hyphomicrobium nitrativorans (isolates:1; rSTs:1)
          • Hyphomicrobium sp. (isolates:10; rSTs:10 tree)
          • Hyphomicrobium sulfonivorans (isolates:3; rSTs:2)
          • Hyphomicrobium zavarzinii (isolates:1; rSTs:1)
        • Methyloceanibacter (isolates:6; rSTs:5 tree)
          • Methyloceanibacter caenitepidi (isolates:1; rSTs:1)
          • Methyloceanibacter marginalis (isolates:1)
          • Methyloceanibacter methanicus (isolates:1; rSTs:1)
          • Methyloceanibacter sp. (isolates:1; rSTs:1)
          • Methyloceanibacter stevinii (isolates:1; rSTs:1)
          • Methyloceanibacter superfactus (isolates:1; rSTs:1)
        • Methyloligella (isolates:3; rSTs:2)
          • Methyloligella halotolerans (isolates:1; rSTs:1)
          • Methyloligella sp. (isolates:2; rSTs:1)
        • Rhodomicrobium (isolates:7; rSTs:5 tree)
          • Rhodomicrobium lacus (isolates:2; rSTs:2)
          • Rhodomicrobium sp. (isolates:1; rSTs:1)
          • Rhodomicrobium udaipurense (isolates:2; rSTs:1)
          • Rhodomicrobium vannielii (isolates:2; rSTs:1)
        • Rhodoplanes (isolates:8; rSTs:6 tree)
          • Rhodoplanes elegans (isolates:2; rSTs:2)
          • Rhodoplanes roseus (isolates:1; rSTs:1)
          • Rhodoplanes serenus (isolates:2; rSTs:2)
          • Rhodoplanes sp. (isolates:1)
          • Rhodoplanes tepidamans (isolates:2; rSTs:1)
      • Kaistiaceae (isolates:22; rSTs:18 tree)
        • Bauldia (isolates:1; rSTs:1)
          • Bauldia litoralis (isolates:1; rSTs:1)
        • Kaistia (isolates:16; rSTs:13 tree)
          • Kaistia adipata (isolates:1; rSTs:1)
          • Kaistia algarum (isolates:1; rSTs:1)
          • Kaistia dalseonensis (isolates:2; rSTs:1)
          • Kaistia defluvii (isolates:2; rSTs:2)
          • Kaistia geumhonensis (isolates:2; rSTs:1)
          • Kaistia granuli (isolates:1; rSTs:1)
          • Kaistia hirudinis (isolates:1; rSTs:1)
          • Kaistia nematophila (isolates:1; rSTs:1)
          • Kaistia soli (isolates:1; rSTs:1)
          • Kaistia sp. (isolates:3; rSTs:2)
          • Kaistia terrae (isolates:1; rSTs:1)
        • Prosthecomicrobium (isolates:5; rSTs:4 tree)
          • Prosthecomicrobium hirschii (isolates:3; rSTs:2)
          • Prosthecomicrobium pneumaticum (isolates:1; rSTs:1)
          • Prosthecomicrobium sp. (isolates:1; rSTs:1)
      • Lichenihabitantaceae (isolates:7; rSTs:7 tree)
        • Lichenibacterium (isolates:3; rSTs:3 tree)
          • Lichenibacterium dinghuense (isolates:1; rSTs:1)
          • Lichenibacterium minor (isolates:1; rSTs:1)
          • Lichenibacterium ramalinae (isolates:1; rSTs:1)
        • Lichenifustis (isolates:1; rSTs:1)
          • Lichenifustis flavocetrariae (isolates:1; rSTs:1)
        • Lichenihabitans (isolates:3; rSTs:3 tree)
          • Lichenihabitans psoromatis (isolates:2; rSTs:2)
          • Lichenihabitans sp. (isolates:1; rSTs:1)
      • Methylobacteriaceae (isolates:344; rSTs:273 tree)
        • Enterovirga (isolates:2; rSTs:2)
          • Enterovirga aerilata (isolates:1; rSTs:1)
          • Enterovirga rhinocerotis (isolates:1; rSTs:1)
        • Methylobacterium (isolates:240; rSTs:187 tree)
          • Methylobacterium adhaesivum (isolates:2; rSTs:1)
          • Methylobacterium aerolatum (isolates:2; rSTs:1)
          • Methylobacterium ajmalii (isolates:4; rSTs:2)
          • Methylobacterium aquaticum (isolates:1; rSTs:1)
          • Methylobacterium brachiatum (isolates:12; rSTs:7 tree)
          • Methylobacterium brachythecii (isolates:2; rSTs:1)
          • Methylobacterium bullatum (isolates:3; rSTs:2)
          • Methylobacterium cerastii (isolates:1; rSTs:1)
          • Methylobacterium crusticola (isolates:2; rSTs:1)
          • Methylobacterium currus (isolates:3; rSTs:2)
          • Methylobacterium dankookense (isolates:2; rSTs:1)
          • Methylobacterium durans (isolates:2; rSTs:2)
          • Methylobacterium frigidaeris (isolates:2; rSTs:1)
          • Methylobacterium fujisawaense (isolates:3; rSTs:3 tree)
          • Methylobacterium gnaphalii (isolates:3; rSTs:1)
          • Methylobacterium goesingense (isolates:3; rSTs:2)
          • Methylobacterium gossipiicola (isolates:1; rSTs:1)
          • Methylobacterium gregans (isolates:3; rSTs:1)
          • Methylobacterium haplocladii (isolates:2; rSTs:1)
          • Methylobacterium hispanicum (isolates:2; rSTs:2)
          • Methylobacterium indicum (isolates:7; rSTs:4 tree)
          • Methylobacterium iners (isolates:1; rSTs:1)
          • Methylobacterium isbiliense (isolates:2; rSTs:1)
          • Methylobacterium longum (isolates:2; rSTs:1)
          • Methylobacterium marchantiae (isolates:1; rSTs:1)
          • Methylobacterium mesophilicum (isolates:1; rSTs:1)
          • Methylobacterium nigriterrae (isolates:1; rSTs:1)
          • Methylobacterium nodulans (isolates:1; rSTs:1)
          • Methylobacterium nonmethylotrophicum (isolates:1; rSTs:1)
          • Methylobacterium organophilum (isolates:1; rSTs:1)
          • Methylobacterium oryzae (isolates:1; rSTs:1)
          • Methylobacterium oryzihabitans (isolates:1; rSTs:1)
          • Methylobacterium oxalidis (isolates:4; rSTs:2)
          • Methylobacterium persicinum (isolates:2; rSTs:1)
          • Methylobacterium phyllosphaerae (isolates:2; rSTs:1)
          • Methylobacterium phyllostachyos (isolates:1; rSTs:1)
          • Methylobacterium planeticum (isolates:1; rSTs:1)
          • Methylobacterium platani (isolates:2; rSTs:1)
          • Methylobacterium pseudosasicola (isolates:1; rSTs:1)
          • Methylobacterium radiodurans (isolates:1; rSTs:1)
          • Methylobacterium radiotolerans (isolates:7; rSTs:6 tree)
          • Methylobacterium segetis (isolates:1; rSTs:1)
          • Methylobacterium soli (isolates:2; rSTs:1)
          • Methylobacterium sp. (isolates:131; rSTs:112 tree)
          • Methylobacterium symbioticum (isolates:1; rSTs:1)
          • Methylobacterium tardum (isolates:3; rSTs:2)
          • Methylobacterium tarhaniae (isolates:1; rSTs:1)
          • Methylobacterium terrae (isolates:1; rSTs:1)
          • Methylobacterium terricola (isolates:1; rSTs:1)
          • Methylobacterium thuringiense (isolates:1; rSTs:1)
          • Methylobacterium trifolii (isolates:1; rSTs:1)
          • Methylobacterium variabile (isolates:1; rSTs:1)
        • Methylorubrum (isolates:46; rSTs:36 tree)
          • Methylorubrum aminovorans (isolates:3; rSTs:1)
          • Methylorubrum extorquens (isolates:24; rSTs:15 tree)
          • Methylorubrum podarium (isolates:2; rSTs:1)
          • Methylorubrum populi (isolates:2; rSTs:2)
          • Methylorubrum rhodesianum (isolates:3; rSTs:3 tree)
          • Methylorubrum rhodinum (isolates:2; rSTs:1)
          • Methylorubrum salsuginis (isolates:1; rSTs:1)
          • Methylorubrum sp. (isolates:6; rSTs:9 tree)
          • Methylorubrum suomiense (isolates:1; rSTs:1)
          • Methylorubrum thiocyanatum (isolates:1; rSTs:1)
          • Methylorubrum zatmanii (isolates:1; rSTs:1)
        • Microvirga (isolates:56; rSTs:48 tree)
          • Microvirga aerilata (isolates:1; rSTs:1)
          • Microvirga aerophila (isolates:2; rSTs:1)
          • Microvirga alba (isolates:1; rSTs:1)
          • Microvirga antarctica (isolates:1; rSTs:1)
          • Microvirga arabica (isolates:1; rSTs:1)
          • Microvirga arsenatis (isolates:2; rSTs:1)
          • Microvirga arvi (isolates:1; rSTs:1)
          • Microvirga brassicacearum (isolates:1; rSTs:1)
          • Microvirga calopogonii (isolates:1; rSTs:1)
          • Microvirga flavescens (isolates:1; rSTs:1)
          • Microvirga flocculans (isolates:2; rSTs:1)
          • Microvirga guangxiensis (isolates:1; rSTs:1)
          • Microvirga lenta (isolates:1; rSTs:1)
          • Microvirga lotononidis (isolates:2; rSTs:1)
          • Microvirga lupini (isolates:1; rSTs:1)
          • Microvirga makkahensis (isolates:1; rSTs:1)
          • Microvirga massiliensis (isolates:3; rSTs:1)
          • Microvirga mediterraneensis (isolates:1; rSTs:1)
          • Microvirga ossetica (isolates:1; rSTs:1)
          • Microvirga pakistanensis (isolates:1; rSTs:1)
          • Microvirga pudoricolor (isolates:1; rSTs:1)
          • Microvirga puerhi (isolates:1; rSTs:1)
          • Microvirga rosea (isolates:1; rSTs:1)
          • Microvirga roseola (isolates:1; rSTs:1)
          • Microvirga soli (isolates:1; rSTs:1)
          • Microvirga solisilvae (isolates:1; rSTs:1)
          • Microvirga sp. (isolates:14; rSTs:13 tree)
          • Microvirga splendida (isolates:1; rSTs:1)
          • Microvirga subterranea (isolates:1; rSTs:1)
          • Microvirga terrae (isolates:1; rSTs:1)
          • Microvirga terrestris (isolates:1; rSTs:1)
          • Microvirga terricola (isolates:1; rSTs:1)
          • Microvirga thermotolerans (isolates:1; rSTs:1)
          • Microvirga tunisiensis (isolates:2; rSTs:1)
          • Microvirga vignae (isolates:1; rSTs:1)
          • Microvirga zambiensis (isolates:1; rSTs:1)
      • Methylocystaceae (isolates:54; rSTs:44 tree)
        • Methylocystis (isolates:36; rSTs:27 tree)
          • Methylocystis bryophila (isolates:2; rSTs:1)
          • Methylocystis echinoides (isolates:2; rSTs:2)
          • Methylocystis heyeri (isolates:1; rSTs:2)
          • Methylocystis hirsuta (isolates:1; rSTs:1)
          • Methylocystis iwaonis (isolates:2; rSTs:2)
          • Methylocystis parvus (isolates:3; rSTs:1)
          • Methylocystis rosea (isolates:3; rSTs:3 tree)
          • Methylocystis silviterrae (isolates:1; rSTs:1)
          • Methylocystis sp. (isolates:20; rSTs:14 tree)
          • Methylocystis suflitae (isolates:1)
        • Methylosinus (isolates:18; rSTs:17 tree)
          • Methylosinus sp. (isolates:12; rSTs:12 tree)
          • Methylosinus sporium (isolates:3; rSTs:2)
          • Methylosinus trichosporium (isolates:3; rSTs:3 tree)
      • Methylopilaceae (isolates:11; rSTs:9 tree)
        • Hansschlegelia (isolates:4; rSTs:4 tree)
          • Hansschlegelia beijingensis (isolates:1; rSTs:1)
          • Hansschlegelia plantiphila (isolates:1; rSTs:1)
          • Hansschlegelia quercus (isolates:1; rSTs:1)
          • Hansschlegelia zhihuaiae (isolates:1; rSTs:1)
        • Methylopila (isolates:7; rSTs:5 tree)
          • Methylopila capsulata (isolates:2; rSTs:1)
          • Methylopila jiangsuensis (isolates:2; rSTs:1)
          • Methylopila sp. (isolates:2; rSTs:2)
          • Methylopila turkensis (isolates:1; rSTs:1)
      • Nitrobacteraceae (isolates:1109; rSTs:699 tree)
        • Afipia (isolates:27; rSTs:13 tree)
          • Afipia birgiae (isolates:1; rSTs:1)
          • Afipia broomeae (isolates:2; rSTs:1)
          • Afipia carboxidovorans (isolates:4; rSTs:2)
          • Afipia clevelandensis (isolates:1; rSTs:1)
          • Afipia felis (isolates:4; rSTs:1)
          • Afipia massiliensis (isolates:2; rSTs:2)
          • Afipia sp. (isolates:11; rSTs:4 tree)
          • [Pseudomonas] carboxydohydrogena (isolates:2; rSTs:1)
        • Bradyrhizobium (isolates:1020; rSTs:626 tree)
          • Bradyrhizobium acaciae (isolates:1; rSTs:1)
          • Bradyrhizobium aeschynomenes (isolates:3; rSTs:3 tree)
          • Bradyrhizobium agreste (isolates:1; rSTs:1)
          • Bradyrhizobium algeriense (isolates:3; rSTs:2)
          • Bradyrhizobium altum (isolates:1; rSTs:1)
          • Bradyrhizobium amphicarpaeae (isolates:1; rSTs:1)
          • Bradyrhizobium arachidis (isolates:4; rSTs:2)
          • Bradyrhizobium archetypum (isolates:1; rSTs:1)
          • Bradyrhizobium australafricanum (isolates:1; rSTs:2)
          • Bradyrhizobium australiense (isolates:1; rSTs:1)
          • Bradyrhizobium barranii (isolates:6; rSTs:6 tree)
          • Bradyrhizobium betae (isolates:2; rSTs:1)
          • Bradyrhizobium brasilense (isolates:5; rSTs:5 tree)
          • Bradyrhizobium cajani (isolates:2; rSTs:2)
          • Bradyrhizobium campsiandrae (isolates:2; rSTs:1)
          • Bradyrhizobium canariense (isolates:17; rSTs:11 tree)
          • Bradyrhizobium cenepequi (isolates:1; rSTs:1)
          • Bradyrhizobium centrolobii (isolates:1; rSTs:1)
          • Bradyrhizobium centrosematis (isolates:2; rSTs:1)
          • Bradyrhizobium commune (isolates:1; rSTs:1)
          • Bradyrhizobium cosmicum (isolates:2; rSTs:2)
          • Bradyrhizobium cytisi (isolates:1; rSTs:1)
          • Bradyrhizobium daqingense (isolates:2; rSTs:1)
          • Bradyrhizobium denitrificans (isolates:3; rSTs:2)
          • Bradyrhizobium diazoefficiens (isolates:45; rSTs:14 tree)
          • Bradyrhizobium diversitatis (isolates:1; rSTs:1)
          • Bradyrhizobium elkanii (isolates:60; rSTs:16 tree)
          • Bradyrhizobium embrapense (isolates:1; rSTs:1)
          • Bradyrhizobium erythrophlei (isolates:1; rSTs:1)
          • Bradyrhizobium forestalis (isolates:1; rSTs:1)
          • Bradyrhizobium frederickii (isolates:2; rSTs:2)
          • Bradyrhizobium genosp. L (isolates:1; rSTs:1)
          • Bradyrhizobium glycinis (isolates:1; rSTs:1)
          • Bradyrhizobium guangdongense (isolates:3; rSTs:1)
          • Bradyrhizobium guangxiense (isolates:1; rSTs:1)
          • Bradyrhizobium guangzhouense (isolates:3; rSTs:3 tree)
          • Bradyrhizobium hereditatis (isolates:1; rSTs:1)
          • Bradyrhizobium hipponense (isolates:1; rSTs:1)
          • Bradyrhizobium huanghuaihaiense (isolates:2; rSTs:2)
          • Bradyrhizobium icense (isolates:1; rSTs:1)
          • Bradyrhizobium iriomotense (isolates:2; rSTs:2)
          • Bradyrhizobium ivorense (isolates:3; rSTs:3 tree)
          • Bradyrhizobium japonicum (isolates:68; rSTs:24 tree)
          • Bradyrhizobium jicamae (isolates:1; rSTs:1)
          • Bradyrhizobium lablabi (isolates:1; rSTs:1)
          • Bradyrhizobium liaoningense (isolates:3; rSTs:3 tree)
          • Bradyrhizobium macuxiense (isolates:1; rSTs:1)
          • Bradyrhizobium manausense (isolates:1; rSTs:1)
          • Bradyrhizobium mercantei (isolates:1; rSTs:1)
          • Bradyrhizobium murdochi (isolates:1; rSTs:1)
          • Bradyrhizobium nanningense (isolates:2; rSTs:2)
          • Bradyrhizobium neotropicale (isolates:1; rSTs:1)
          • Bradyrhizobium niftali (isolates:1; rSTs:1)
          • Bradyrhizobium nitroreducens (isolates:1; rSTs:1)
          • Bradyrhizobium oligotrophicum (isolates:1; rSTs:1)
          • Bradyrhizobium ontarionense (isolates:1; rSTs:1)
          • Bradyrhizobium oropedii (isolates:1; rSTs:1)
          • Bradyrhizobium ottawaense (isolates:25; rSTs:8 tree)
          • Bradyrhizobium pachyrhizi (isolates:3; rSTs:3 tree)
          • Bradyrhizobium paxllaeri (isolates:1; rSTs:1)
          • Bradyrhizobium prioriisuperbiae (isolates:1; rSTs:1)
          • Bradyrhizobium quebecense (isolates:2; rSTs:2)
          • Bradyrhizobium retamae (isolates:1; rSTs:1)
          • Bradyrhizobium rifense (isolates:1; rSTs:1)
          • Bradyrhizobium roseum (isolates:1)
          • Bradyrhizobium sacchari (isolates:3; rSTs:1)
          • Bradyrhizobium sediminis (isolates:3; rSTs:3 tree)
          • Bradyrhizobium semiaridum (isolates:1; rSTs:1)
          • Bradyrhizobium septentrionale (isolates:4; rSTs:4 tree)
          • Bradyrhizobium shewense (isolates:1; rSTs:1)
          • Bradyrhizobium sp. (isolates:648; rSTs:417 tree)
          • Bradyrhizobium stylosanthis (isolates:2; rSTs:2)
          • Bradyrhizobium symbiodeficiens (isolates:6; rSTs:6 tree)
          • Bradyrhizobium tropiciagri (isolates:1; rSTs:1)
          • Bradyrhizobium uaiense (isolates:1; rSTs:1)
          • Bradyrhizobium valentinum (isolates:2; rSTs:1)
          • Bradyrhizobium vignae (isolates:3; rSTs:3 tree)
          • Bradyrhizobium viridifuturi (isolates:9; rSTs:2)
          • Bradyrhizobium xenonodulans (isolates:1; rSTs:1)
          • Bradyrhizobium yuanmingense (isolates:14; rSTs:14 tree)
          • Bradyrhizobium zhanjiangense (isolates:4; rSTs:3 tree)
          • Bradyrhizobium zhengyangense (isolates:3; rSTs:3 tree)
        • Nitrobacter (isolates:8; rSTs:7 tree)
          • Nitrobacter hamburgensis (isolates:1; rSTs:1)
          • Nitrobacter sp. (isolates:2; rSTs:2)
          • Nitrobacter vulgaris (isolates:2; rSTs:2)
          • Nitrobacter winogradskyi (isolates:3; rSTs:2)
        • Rhodopseudomonas (isolates:32; rSTs:33 tree)
          • Rhodopseudomonas faecalis (isolates:1; rSTs:1)
          • Rhodopseudomonas infernalis (isolates:1; rSTs:1)
          • Rhodopseudomonas palustris (isolates:18; rSTs:13 tree)
          • Rhodopseudomonas pentothenatexigens (isolates:2; rSTs:1)
          • Rhodopseudomonas pseudopalustris (isolates:1; rSTs:1)
          • Rhodopseudomonas rhenobacensis (isolates:1; rSTs:1)
          • Rhodopseudomonas sp. (isolates:8; rSTs:15 tree)
        • Tardiphaga (isolates:18; rSTs:18 tree)
          • Tardiphaga alba (isolates:1; rSTs:1)
          • Tardiphaga robiniae (isolates:4; rSTs:4 tree)
          • Tardiphaga sp. (isolates:13; rSTs:13 tree)
        • Undibacter (isolates:1; rSTs:1)
          • Undibacter mobilis (isolates:1; rSTs:1)
        • Variibacter (isolates:3; rSTs:1)
          • Variibacter gotjawalensis (isolates:3; rSTs:1)
      • Notoacmeibacteraceae (isolates:5; rSTs:5 tree)
        • Notoacmeibacter (isolates:4; rSTs:4 tree)
          • Notoacmeibacter marinus (isolates:2; rSTs:2)
          • Notoacmeibacter ruber (isolates:1; rSTs:1)
          • Notoacmeibacter sp. (isolates:1; rSTs:1)
        • Zhengella (isolates:1; rSTs:1)
          • Zhengella mangrovi (isolates:1; rSTs:1)
      • Parvibaculaceae (isolates:11; rSTs:9 tree)
        • Anderseniella (isolates:1; rSTs:1)
          • Anderseniella sp. (isolates:1; rSTs:1)
        • Candidatus Phaeomarinobacter (isolates:1; rSTs:1)
          • Candidatus Phaeomarinobacter ectocarpi (isolates:1; rSTs:1)
        • Kaustia (isolates:1; rSTs:1)
          • Kaustia mangrovi (isolates:1; rSTs:1)
        • Parvibaculum (isolates:3; rSTs:3 tree)
          • Parvibaculum indicum (isolates:1; rSTs:1)
          • Parvibaculum lavamentivorans (isolates:1; rSTs:1)
          • Parvibaculum sedimenti (isolates:1; rSTs:1)
        • Pyruvatibacter (isolates:3; rSTs:1)
          • Pyruvatibacter mobilis (isolates:3; rSTs:1)
        • Tepidicaulis (isolates:2; rSTs:2)
          • Tepidicaulis marinus (isolates:1; rSTs:1)
          • Tepidicaulis sp. (isolates:1; rSTs:1)
      • Phreatobacteraceae (isolates:5; rSTs:5 tree)
        • Phreatobacter (isolates:5; rSTs:5 tree)
          • Phreatobacter aquaticus (isolates:1; rSTs:1)
          • Phreatobacter cathodiphilus (isolates:1; rSTs:1)
          • Phreatobacter oligotrophus (isolates:1; rSTs:1)
          • Phreatobacter sp. (isolates:1; rSTs:1)
          • Phreatobacter stygius (isolates:1; rSTs:1)
      • Phyllobacteriaceae (isolates:1115; rSTs:734 tree)
        • Aliihoeflea (isolates:3; rSTs:3 tree)
          • Aliihoeflea aestuarii (isolates:1; rSTs:1)
          • Aliihoeflea sp. (isolates:2; rSTs:2)
        • Aminobacter (isolates:28; rSTs:19 tree)
          • Aminobacter aganoensis (isolates:2; rSTs:1)
          • Aminobacter aminovorans (isolates:5; rSTs:2)
          • Aminobacter anthyllidis (isolates:2; rSTs:2)
          • Aminobacter carboxidus (isolates:2; rSTs:2)
          • Aminobacter ciceronei (isolates:2; rSTs:1)
          • Aminobacter niigataensis (isolates:3; rSTs:2)
          • Aminobacter sp. (isolates:12; rSTs:9 tree)
        • Aquamicrobium (isolates:9; rSTs:9 tree)
          • Aquamicrobium aerolatum (isolates:1; rSTs:1)
          • Aquamicrobium ahrensii (isolates:1; rSTs:1)
          • Aquamicrobium defluvii (isolates:2; rSTs:2)
          • Aquamicrobium lusatiense (isolates:2; rSTs:2)
          • Aquamicrobium sp. (isolates:1; rSTs:1)
          • Aquamicrobium terrae (isolates:1; rSTs:1)
          • Aquamicrobium zhengzhouense (isolates:1; rSTs:1)
        • Aquibium (isolates:4; rSTs:4 tree)
          • Aquibium carbonis (isolates:1; rSTs:1)
          • Aquibium microcysteis (isolates:1; rSTs:1)
          • Aquibium oceanicum (isolates:1; rSTs:1)
          • Aquibium sp. (isolates:1; rSTs:1)
        • Chelativorans (isolates:12; rSTs:11 tree)
          • Chelativorans alearense (isolates:1; rSTs:1)
          • Chelativorans intermedius (isolates:1; rSTs:1)
          • Chelativorans multitrophicus (isolates:1; rSTs:1)
          • Chelativorans oligotrophicus (isolates:1; rSTs:1)
          • Chelativorans petroleitrophicus (isolates:1; rSTs:1)
          • Chelativorans salis (isolates:1; rSTs:1)
          • Chelativorans sp. (isolates:5; rSTs:4 tree)
          • Chelativorans xinjiangense (isolates:1; rSTs:1)
        • Mesorhizobium (isolates:965; rSTs:610 tree)
          • Mesorhizobium abyssinicae (isolates:3; rSTs:3 tree)
          • Mesorhizobium albiziae (isolates:2; rSTs:1)
          • Mesorhizobium album (isolates:1; rSTs:1)
          • Mesorhizobium alhagi (isolates:1; rSTs:1)
          • Mesorhizobium amorphae (isolates:4; rSTs:2)
          • Mesorhizobium atlanticum (isolates:1; rSTs:1)
          • Mesorhizobium australafricanum (isolates:2; rSTs:2)
          • Mesorhizobium australicum (isolates:15; rSTs:11 tree)
          • Mesorhizobium camelthorni (isolates:1; rSTs:1)
          • Mesorhizobium captivum (isolates:5; rSTs:5 tree)
          • Mesorhizobium caraganae (isolates:3; rSTs:3 tree)
          • Mesorhizobium carmichaelinearum (isolates:1; rSTs:1)
          • Mesorhizobium ciceri (isolates:27; rSTs:7 tree)
          • Mesorhizobium comanense (isolates:1; rSTs:1)
          • Mesorhizobium composti (isolates:1; rSTs:1)
          • Mesorhizobium delmotii (isolates:1; rSTs:1)
          • Mesorhizobium denitrificans (isolates:1; rSTs:1)
          • Mesorhizobium dulcispinae (isolates:3; rSTs:2)
          • Mesorhizobium ephedrae (isolates:1; rSTs:1)
          • Mesorhizobium erdmanii (isolates:2; rSTs:2)
          • Mesorhizobium escarrei (isolates:1; rSTs:1)
          • Mesorhizobium hawassense (isolates:1; rSTs:1)
          • Mesorhizobium helmanticense (isolates:1; rSTs:1)
          • Mesorhizobium huakuii (isolates:1; rSTs:1)
          • Mesorhizobium humile (isolates:2; rSTs:1)
          • Mesorhizobium hungaricum (isolates:1; rSTs:1)
          • Mesorhizobium intechi (isolates:1; rSTs:1)
          • Mesorhizobium japonicum (isolates:12; rSTs:3 tree)
          • Mesorhizobium jarvisii (isolates:3; rSTs:2)
          • Mesorhizobium kowhaii (isolates:1; rSTs:1)
          • Mesorhizobium liriopis (isolates:1; rSTs:1)
          • Mesorhizobium loti (isolates:1; rSTs:1)
          • Mesorhizobium mediterraneum (isolates:2; rSTs:1)
          • Mesorhizobium metallidurans (isolates:1; rSTs:1)
          • Mesorhizobium microcysteis (isolates:1; rSTs:1)
          • Mesorhizobium montanum (isolates:1; rSTs:1)
          • Mesorhizobium muleiense (isolates:4; rSTs:3 tree)
          • Mesorhizobium neociceri (isolates:1; rSTs:1)
          • Mesorhizobium norvegicum (isolates:1; rSTs:1)
          • Mesorhizobium onobrychidis (isolates:1; rSTs:1)
          • Mesorhizobium opportunistum (isolates:8; rSTs:5 tree)
          • Mesorhizobium plurifarium (isolates:4; rSTs:4 tree)
          • Mesorhizobium prunaredense (isolates:1; rSTs:1)
          • Mesorhizobium qingshengii (isolates:2; rSTs:2)
          • Mesorhizobium robiniae (isolates:1; rSTs:1)
          • Mesorhizobium sangaii (isolates:1; rSTs:1)
          • Mesorhizobium sanjuanii (isolates:1; rSTs:1)
          • Mesorhizobium sediminum (isolates:1; rSTs:1)
          • Mesorhizobium shangrilense (isolates:1; rSTs:1)
          • Mesorhizobium shonense (isolates:1; rSTs:1)
          • Mesorhizobium silamurunense (isolates:2; rSTs:2)
          • Mesorhizobium soli (isolates:2; rSTs:2)
          • Mesorhizobium sophorae (isolates:1; rSTs:1)
          • Mesorhizobium sp. (isolates:814; rSTs:505 tree)
          • Mesorhizobium tamadayense (isolates:1; rSTs:1)
          • Mesorhizobium temperatum (isolates:1; rSTs:1)
          • Mesorhizobium tianshanense (isolates:2; rSTs:1)
          • Mesorhizobium vachelliae (isolates:2; rSTs:1)
          • Mesorhizobium ventifaucium (isolates:1; rSTs:1)
          • Mesorhizobium waimense (isolates:1; rSTs:1)
          • Mesorhizobium wenxiniae (isolates:1; rSTs:1)
          • Mesorhizobium xinjiangense (isolates:1; rSTs:1)
          • Mesorhizobium zhangyense (isolates:1; rSTs:1)
        • Nitratireductor (isolates:37; rSTs:30 tree)
          • Nitratireductor aestuarii (isolates:1; rSTs:1)
          • Nitratireductor alexandrii (isolates:1; rSTs:1)
          • Nitratireductor aquibiodomus (isolates:3; rSTs:2 tree)
          • Nitratireductor aquimarinus (isolates:9; rSTs:5 tree)
          • Nitratireductor arenosus (isolates:1; rSTs:1)
          • Nitratireductor basaltis (isolates:1; rSTs:1)
          • Nitratireductor indicus (isolates:3; rSTs:2)
          • Nitratireductor kimnyeongensis (isolates:1; rSTs:1)
          • Nitratireductor luteus (isolates:1; rSTs:1)
          • Nitratireductor mangrovi (isolates:1; rSTs:1)
          • Nitratireductor pacificus (isolates:1; rSTs:1)
          • Nitratireductor rhodophyticola (isolates:4; rSTs:3 tree)
          • Nitratireductor soli (isolates:1; rSTs:1)
          • Nitratireductor sp. (isolates:8; rSTs:8 tree)
          • Nitratireductor thuwali (isolates:1; rSTs:1)
        • Oryzicola (isolates:1; rSTs:1)
          • Oryzicola mucosus (isolates:1; rSTs:1)
        • Paramesorhizobium (isolates:1; rSTs:1)
          • Paramesorhizobium deserti (isolates:1; rSTs:1)
        • Phyllobacterium (isolates:46; rSTs:38 tree)
          • Candidatus Phyllobacterium onerii (isolates:1; rSTs:1)
          • Phyllobacterium bourgognense (isolates:1; rSTs:1)
          • Phyllobacterium brassicacearum (isolates:2; rSTs:1)
          • Phyllobacterium calauticae (isolates:1; rSTs:1)
          • Phyllobacterium endophyticum (isolates:4; rSTs:2)
          • Phyllobacterium ifriqiyense (isolates:2; rSTs:2)
          • Phyllobacterium leguminum (isolates:1; rSTs:1)
          • Phyllobacterium myrsinacearum (isolates:5; rSTs:2)
          • Phyllobacterium pellucidum (isolates:1; rSTs:1)
          • Phyllobacterium phragmitis (isolates:1; rSTs:1)
          • Phyllobacterium salinisoli (isolates:1; rSTs:1)
          • Phyllobacterium sophorae (isolates:1; rSTs:1)
          • Phyllobacterium sp. (isolates:22; rSTs:21 tree)
          • Phyllobacterium trifolii (isolates:1; rSTs:1)
          • Phyllobacterium zundukense (isolates:2; rSTs:1)
        • Pseudaminobacter (isolates:6; rSTs:5 tree)
          • Pseudaminobacter arsenicus (isolates:1; rSTs:1)
          • Pseudaminobacter manganicus (isolates:1; rSTs:1)
          • Pseudaminobacter salicylatoxidans (isolates:2; rSTs:2)
          • Pseudaminobacter soli (isolates:2; rSTs:1)
        • Tianweitania (isolates:3; rSTs:3 tree)
          • Tianweitania aestuarii (isolates:1; rSTs:1)
          • Tianweitania populi (isolates:1; rSTs:1)
          • Tianweitania sediminis (isolates:1; rSTs:1)
      • Pleomorphomonadaceae (isolates:21; rSTs:17 tree)
        • Chthonobacter (isolates:2; rSTs:2)
          • Chthonobacter albigriseus (isolates:1; rSTs:1)
          • Chthonobacter rhizosphaerae (isolates:1; rSTs:1)
        • Hartmannibacter (isolates:1; rSTs:1)
          • Hartmannibacter diazotrophicus (isolates:1; rSTs:1)
        • Methylobrevis (isolates:2; rSTs:2)
          • Methylobrevis albus (isolates:1; rSTs:1)
          • Methylobrevis pamukkalensis (isolates:1; rSTs:1)
        • Mongoliimonas (isolates:1; rSTs:1)
          • Mongoliimonas terrestris (isolates:1; rSTs:1)
        • Oharaeibacter (isolates:3; rSTs:1)
          • Oharaeibacter diazotrophicus (isolates:3; rSTs:1)
        • Oryzibacter (isolates:1; rSTs:1)
          • Oryzibacter oryziterrae (isolates:1; rSTs:1)
        • Pleomorphomonas (isolates:11; rSTs:9 tree)
          • Pleomorphomonas carboxyditropha (isolates:1; rSTs:1)
          • Pleomorphomonas diazotrophica (isolates:2; rSTs:1)
          • Pleomorphomonas koreensis (isolates:1; rSTs:1)
          • Pleomorphomonas oryzae (isolates:1; rSTs:1)
          • Pleomorphomonas sp. (isolates:6; rSTs:5 tree)
      • Propylenellaceae (isolates:1; rSTs:1)
        • Propylenella (isolates:1; rSTs:1)
          • Propylenella binzhouense (isolates:1; rSTs:1)
      • Reyranellaceae (isolates:5; rSTs:5 tree)
        • Reyranella (isolates:5; rSTs:5 tree)
          • Reyranella aquatilis (isolates:1; rSTs:1)
          • Reyranella humidisoli (isolates:1; rSTs:1)
          • Reyranella massiliensis (isolates:1; rSTs:1)
          • Reyranella soli (isolates:1; rSTs:1)
          • Reyranella sp. (isolates:1; rSTs:1)
      • Rhabdaerophilaceae (isolates:2; rSTs:2)
        • Rhabdaerophilum (isolates:2; rSTs:2)
          • Rhabdaerophilum calidifontis (isolates:1; rSTs:1)
          • Rhabdaerophilum sp. (isolates:1; rSTs:1)
      • Rhizobiaceae (isolates:2047; rSTs:1523)
        • Agrobacterium (isolates:351; rSTs:241 tree)
          • Agrobacterium albertimagni (isolates:1; rSTs:1)
          • Agrobacterium arsenijevicii (isolates:2; rSTs:1)
          • Agrobacterium bohemicum (isolates:2; rSTs:1)
          • Agrobacterium burrii (isolates:1; rSTs:1)
          • Agrobacterium cavarae (isolates:1; rSTs:1)
          • Agrobacterium cucumeris (isolates:1; rSTs:1)
          • Agrobacterium deltaense (isolates:3; rSTs:3 tree)
          • Agrobacterium fabrum (isolates:34; rSTs:17 tree)
          • Agrobacterium genomosp. 13 (isolates:1; rSTs:1)
          • Agrobacterium larrymoorei (isolates:5; rSTs:4 tree)
          • Agrobacterium leguminum (isolates:5; rSTs:5 tree)
          • Agrobacterium pusense (isolates:36; rSTs:26 tree)
          • Agrobacterium radiobacter (isolates:21; rSTs:7 tree)
          • Agrobacterium rosae (isolates:11; rSTs:9 tree)
          • Agrobacterium rubi (isolates:11; rSTs:4 tree)
          • Agrobacterium salinitolerans (isolates:14; rSTs:12 tree)
          • Agrobacterium sp. (isolates:69; rSTs:83 tree)
          • Agrobacterium tomkonis (isolates:5; rSTs:4 tree)
          • Agrobacterium tumefaciens (isolates:89; rSTs:41 tree)
          • Agrobacterium vaccinii (isolates:2; rSTs:2)
          • Agrobacterium vitis (isolates:37; rSTs:17 tree)
        • Allorhizobium (isolates:16; rSTs:14 tree)
          • Allorhizobium ampelinum (isolates:9; rSTs:8 tree)
          • Allorhizobium borbori (isolates:1; rSTs:1)
          • Allorhizobium pseudoryzae (isolates:1; rSTs:1)
          • Allorhizobium sonneratiae (isolates:1; rSTs:1)
          • Allorhizobium taibaishanense (isolates:2; rSTs:1)
          • Allorhizobium terrae (isolates:1; rSTs:1)
          • Allorhizobium undicola (isolates:1; rSTs:1)
        • Ciceribacter (isolates:11; rSTs:9 tree)
          • Ciceribacter ferrooxidans (isolates:1; rSTs:1)
          • Ciceribacter lividus (isolates:1; rSTs:1)
          • Ciceribacter naphthalenivorans (isolates:2; rSTs:1)
          • Ciceribacter selenitireducens (isolates:2; rSTs:2)
          • Ciceribacter sichuanensis (isolates:2; rSTs:2)
          • Ciceribacter sp. (isolates:2; rSTs:1)
          • Ciceribacter thiooxidans (isolates:1; rSTs:1)
        • Ectorhizobium (isolates:1; rSTs:1)
          • Ectorhizobium quercum (isolates:1; rSTs:1)
        • Endobacterium (isolates:2; rSTs:1)
          • Endobacterium cereale (isolates:2; rSTs:1)
        • Ensifer (isolates:75; rSTs:63 tree)
          • Ensifer adhaerens (isolates:17; rSTs:15 tree)
          • Ensifer aridi (isolates:6; rSTs:6 tree)
          • Ensifer canadensis (isolates:3; rSTs:2)
          • Ensifer oleiphilus (isolates:1; rSTs:1)
          • Ensifer sesbaniae (isolates:2; rSTs:2)
          • Ensifer sp. (isolates:46; rSTs:37 tree)
        • Fererhizobium (isolates:2; rSTs:1)
          • Fererhizobium litorale (isolates:2; rSTs:1)
        • Ferranicluibacter (isolates:1; rSTs:1)
          • Ferranicluibacter rubi (isolates:1; rSTs:1)
        • Flavimaribacter (isolates:1; rSTs:1)
          • Flavimaribacter sediminis (isolates:1; rSTs:1)
        • Gellertiella (isolates:1; rSTs:1)
          • Gellertiella hungarica (isolates:1; rSTs:1)
        • Georhizobium (isolates:1; rSTs:1)
          • Georhizobium profundi (isolates:1; rSTs:1)
        • Hoeflea (isolates:18; rSTs:15 tree)
          • Hoeflea alexandrii (isolates:2; rSTs:1)
          • Hoeflea algicola (isolates:1; rSTs:1)
          • Hoeflea halophila (isolates:1; rSTs:1)
          • Hoeflea marina (isolates:1; rSTs:1)
          • Hoeflea olei (isolates:1; rSTs:1)
          • Hoeflea phototrophica (isolates:1; rSTs:1)
          • Hoeflea poritis (isolates:1; rSTs:1)
          • Hoeflea prorocentri (isolates:2; rSTs:1)
          • Hoeflea sp. (isolates:7; rSTs:6 tree)
          • Hoeflea ulvae (isolates:1; rSTs:1)
        • Lentilitoribacter (isolates:2; rSTs:2)
          • Lentilitoribacter sp. (isolates:2; rSTs:2)
        • Liberibacter (isolates:55; rSTs:22 tree)
          • Candidatus Liberibacter africanus (isolates:3; rSTs:3 tree)
          • Candidatus Liberibacter americanus (isolates:2; rSTs:2)
          • Candidatus Liberibacter asiaticus (isolates:39; rSTs:11 tree)
          • Candidatus Liberibacter brunswickensis (isolates:1; rSTs:1)
          • Candidatus Liberibacter solanacearum (isolates:8; rSTs:4 tree)
          • Liberibacter crescens (isolates:2; rSTs:1)
        • Metarhizobium (isolates:1; rSTs:1)
          • Metarhizobium album (isolates:1; rSTs:1)
        • Mycoplana (isolates:4; rSTs:4 tree)
          • Mycoplana azooxidifex (isolates:1; rSTs:1)
          • Mycoplana dimorpha (isolates:1; rSTs:1)
          • Mycoplana sp. (isolates:2; rSTs:2)
        • Neorhizobium (isolates:29; rSTs:36 tree)
          • Neorhizobium alkalisoli (isolates:1; rSTs:1)
          • Neorhizobium galegae (isolates:5; rSTs:5 tree)
          • Neorhizobium huautlense (isolates:1; rSTs:1)
          • Neorhizobium lilium (isolates:1; rSTs:1)
          • Neorhizobium petrolearium (isolates:3; rSTs:2)
          • Neorhizobium sp. (isolates:12; rSTs:20 tree)
          • Neorhizobium tomejilense (isolates:4; rSTs:4 tree)
          • Neorhizobium vignae (isolates:1; rSTs:1)
          • Neorhizobium xiangyangii (isolates:1; rSTs:1)
        • Pararhizobium (isolates:9; rSTs:9 tree)
          • Pararhizobium antarcticum (isolates:1; rSTs:1)
          • Pararhizobium arenae (isolates:1; rSTs:1)
          • Pararhizobium capsulatum (isolates:1; rSTs:1)
          • Pararhizobium gei (isolates:1; rSTs:1)
          • Pararhizobium haloflavum (isolates:1; rSTs:1)
          • Pararhizobium mangrovi (isolates:1; rSTs:1)
          • Pararhizobium polonicum (isolates:1; rSTs:1)
          • Pararhizobium qamdonense (isolates:1; rSTs:1)
          • Pararhizobium sp. (isolates:1; rSTs:1)
        • Peteryoungia (isolates:2; rSTs:2)
          • Peteryoungia desertarenae (isolates:1; rSTs:1)
          • Peteryoungia ipomoeae (isolates:1; rSTs:1)
        • Pseudohoeflea (isolates:2; rSTs:2)
          • Pseudohoeflea sp. (isolates:1; rSTs:1)
          • Pseudohoeflea suaedae (isolates:1; rSTs:1)
        • Pseudorhizobium (isolates:12; rSTs:8 tree)
          • Pseudorhizobium banfieldiae (isolates:1; rSTs:1)
          • Pseudorhizobium endolithicum (isolates:1; rSTs:1)
          • Pseudorhizobium flavum (isolates:4; rSTs:2)
          • Pseudorhizobium halotolerans (isolates:2; rSTs:1)
          • Pseudorhizobium marinum (isolates:1; rSTs:1)
          • Pseudorhizobium pelagicum (isolates:1; rSTs:1)
          • Pseudorhizobium tarimense (isolates:2; rSTs:1)
        • Rhizobium (isolates:986; rSTs:844 tree)
          • Rhizobium acaciae (isolates:3; rSTs:2)
          • Rhizobium acidisoli (isolates:2; rSTs:1)
          • Rhizobium aegyptiacum (isolates:1; rSTs:1)
          • Rhizobium aethiopicum (isolates:1; rSTs:1)
          • Rhizobium alamii (isolates:2; rSTs:1)
          • Rhizobium alarense (isolates:1; rSTs:1)
          • Rhizobium altiplani (isolates:1; rSTs:1)
          • Rhizobium alvei (isolates:2; rSTs:1)
          • Rhizobium anhuiense (isolates:10; rSTs:8 tree)
          • Rhizobium azibense (isolates:2; rSTs:2)
          • Rhizobium bangladeshense (isolates:17; rSTs:13 tree)
          • Rhizobium beringeri (isolates:4; rSTs:4 tree)
          • Rhizobium binae (isolates:10; rSTs:6 tree)
          • Rhizobium brockwellii (isolates:4; rSTs:3 tree)
          • Rhizobium calliandrae (isolates:1; rSTs:1)
          • Rhizobium cauense (isolates:1; rSTs:1)
          • Rhizobium cellulosilyticum (isolates:4; rSTs:2)
          • Rhizobium changzhiense (isolates:4; rSTs:4 tree)
          • Rhizobium chutanense (isolates:2; rSTs:2)
          • Rhizobium cremeum (isolates:2; rSTs:1)
          • Rhizobium croatiense (isolates:3; rSTs:3 tree)
          • Rhizobium daejeonense (isolates:3; rSTs:1)
          • Rhizobium deserti (isolates:1; rSTs:1)
          • Rhizobium dioscoreae (isolates:2; rSTs:2)
          • Rhizobium ecuadorense (isolates:1; rSTs:1)
          • Rhizobium esperanzae (isolates:2; rSTs:2)
          • Rhizobium etli (isolates:3; rSTs:3 tree)
          • Rhizobium fabae (isolates:2; rSTs:1)
          • Rhizobium favelukesii (isolates:4; rSTs:3 tree)
          • Rhizobium freirei (isolates:1; rSTs:1)
          • Rhizobium gallicum (isolates:3; rSTs:3 tree)
          • Rhizobium giardinii (isolates:2; rSTs:1)
          • Rhizobium glycinendophyticum (isolates:1; rSTs:1)
          • Rhizobium grahamii (isolates:3; rSTs:3 tree)
          • Rhizobium hainanense (isolates:1; rSTs:1)
          • Rhizobium halophilum (isolates:1; rSTs:1)
          • Rhizobium halophytocola (isolates:1; rSTs:1)
          • Rhizobium herbae (isolates:1; rSTs:1)
          • Rhizobium hidalgonense (isolates:8; rSTs:6 tree)
          • Rhizobium indicum (isolates:2; rSTs:2)
          • Rhizobium indigoferae (isolates:3; rSTs:1)
          • Rhizobium jaguaris (isolates:1; rSTs:1)
          • Rhizobium johnstonii (isolates:4; rSTs:4 tree)
          • Rhizobium laguerreae (isolates:95; rSTs:74 tree)
          • Rhizobium leguminosarum (isolates:104; rSTs:60 tree)
          • Rhizobium lemnae (isolates:1; rSTs:1)
          • Rhizobium lentis (isolates:27; rSTs:15 tree)
          • Rhizobium leucaenae (isolates:5; rSTs:2)
          • Rhizobium lusitanum (isolates:5; rSTs:5 tree)
          • Rhizobium mayense (isolates:1; rSTs:1)
          • Rhizobium mesoamericanum (isolates:3; rSTs:3 tree)
          • Rhizobium mesosinicum (isolates:1; rSTs:1)
          • Rhizobium metallidurans (isolates:1; rSTs:1)
          • Rhizobium miluonense (isolates:1; rSTs:1)
          • Rhizobium mongolense (isolates:5; rSTs:3 tree)
          • Rhizobium multihospitium (isolates:1; rSTs:1)
          • Rhizobium nepotum (isolates:2; rSTs:2)
          • Rhizobium oryzicola (isolates:1; rSTs:1)
          • Rhizobium oryzihabitans (isolates:1; rSTs:1)
          • Rhizobium oryziradicis (isolates:1; rSTs:1)
          • Rhizobium paranaense (isolates:1; rSTs:1)
          • Rhizobium phaseoli (isolates:26; rSTs:17 tree)
          • Rhizobium pisi (isolates:3; rSTs:1)
          • Rhizobium populisoli (isolates:1; rSTs:1)
          • Rhizobium redzepovicii (isolates:4; rSTs:4 tree)
          • Rhizobium rhizogenes (isolates:80; rSTs:50 tree)
          • Rhizobium rhizolycopersici (isolates:1; rSTs:1)
          • Rhizobium rhizophilum (isolates:1; rSTs:1)
          • Rhizobium rhizoryzae (isolates:2; rSTs:1)
          • Rhizobium rhododendri (isolates:1; rSTs:1)
          • Rhizobium rosettiformans (isolates:4; rSTs:2)
          • Rhizobium ruizarguesonis (isolates:149; rSTs:72 tree)
          • Rhizobium setariae (isolates:1; rSTs:1)
          • Rhizobium skierniewicense (isolates:3; rSTs:2)
          • Rhizobium smilacinae (isolates:1; rSTs:1)
          • Rhizobium soli (isolates:1; rSTs:1)
          • Rhizobium sophorae (isolates:1; rSTs:1)
          • Rhizobium sophoriradicis (isolates:4; rSTs:4 tree)
          • Rhizobium sp. (isolates:293; rSTs:388 tree)
          • Rhizobium straminoryzae (isolates:1; rSTs:1)
          • Rhizobium subbaraonis (isolates:1; rSTs:1)
          • Rhizobium sullae (isolates:5; rSTs:4 tree)
          • Rhizobium terrae (isolates:1; rSTs:1)
          • Rhizobium terricola (isolates:1; rSTs:1)
          • Rhizobium tibeticum (isolates:3; rSTs:2)
          • Rhizobium tropici (isolates:6; rSTs:4 tree)
          • Rhizobium tubonense (isolates:1; rSTs:1)
          • Rhizobium tumorigenes (isolates:2; rSTs:2)
          • Rhizobium vallis (isolates:1; rSTs:1)
          • Rhizobium viscosum (isolates:2; rSTs:1)
          • Rhizobium wenxiniae (isolates:2; rSTs:1)
          • Rhizobium wuzhouense (isolates:1; rSTs:1)
        • Shinella (isolates:41; rSTs:30 tree)
          • Shinella curvata (isolates:2; rSTs:1)
          • Shinella daejeonensis (isolates:1; rSTs:1)
          • Shinella fusca (isolates:1; rSTs:1)
          • Shinella granuli (isolates:2; rSTs:1)
          • Shinella kummerowiae (isolates:2; rSTs:2)
          • Shinella lacus (isolates:1; rSTs:1)
          • Shinella oryzae (isolates:2; rSTs:2)
          • Shinella pollutisoli (isolates:1; rSTs:1)
          • Shinella sedimenti (isolates:1; rSTs:1)
          • Shinella sp. (isolates:18; rSTs:13 tree)
          • Shinella sumterensis (isolates:3; rSTs:2)
          • Shinella yambaruensis (isolates:3; rSTs:1)
          • Shinella zoogloeoides (isolates:4; rSTs:3 tree)
        • Sinorhizobium (isolates:420; rSTs:211 tree)
          • Sinorhizobium alkalisoli (isolates:2; rSTs:2)
          • Sinorhizobium americanum (isolates:6; rSTs:5 tree)
          • Sinorhizobium arboris (isolates:1; rSTs:1)
          • Sinorhizobium chiapasense (isolates:1; rSTs:1)
          • Sinorhizobium fredii (isolates:23; rSTs:11 tree)
          • Sinorhizobium garamanticum (isolates:1; rSTs:1)
          • Sinorhizobium glycinis (isolates:1; rSTs:1)
          • Sinorhizobium kostiense (isolates:1; rSTs:1)
          • Sinorhizobium medicae (isolates:72; rSTs:37 tree)
          • Sinorhizobium meliloti (isolates:284; rSTs:133 tree)
          • Sinorhizobium mexicanum (isolates:2; rSTs:1)
          • Sinorhizobium numidicum (isolates:2; rSTs:1)
          • Sinorhizobium psoraleae (isolates:2; rSTs:2)
          • Sinorhizobium saheli (isolates:2; rSTs:1)
          • Sinorhizobium shofinae (isolates:1)
          • Sinorhizobium sojae (isolates:2; rSTs:1)
          • Sinorhizobium sp. (isolates:14; rSTs:10 tree)
          • Sinorhizobium terangae (isolates:3; rSTs:2)
        • Xaviernesmea (isolates:4; rSTs:3 tree)
          • Xaviernesmea oryzae (isolates:2; rSTs:1)
          • Xaviernesmea rhizosphaerae (isolates:2; rSTs:2)
      • Rhodobiaceae (isolates:3; rSTs:2)
        • Rhodobium (isolates:3; rSTs:2)
          • Rhodobium gokarnense (isolates:1; rSTs:1)
          • Rhodobium orientis (isolates:2; rSTs:1)
      • Rhodoblastaceae (isolates:11; rSTs:8 tree)
        • Rhodoblastus (isolates:11; rSTs:8 tree)
          • Candidatus Rhodoblastus alkanivorans (isolates:2; rSTs:1)
          • Rhodoblastus acidophilus (isolates:6; rSTs:4 tree)
          • Rhodoblastus sp. (isolates:1; rSTs:2)
          • Rhodoblastus sphagnicola (isolates:2; rSTs:1)
      • Rhodoligotrophaceae (isolates:3; rSTs:3 tree)
        • Rhodoligotrophos (isolates:3; rSTs:3 tree)
          • Rhodoligotrophos appendicifer (isolates:1; rSTs:1)
          • Rhodoligotrophos defluvii (isolates:1; rSTs:1)
          • Rhodoligotrophos sp. (isolates:1; rSTs:1)
      • Roseiarcaceae (isolates:1; rSTs:1)
        • Roseiarcus (isolates:1; rSTs:1)
          • Roseiarcus fermentans (isolates:1; rSTs:1)
      • Salaquimonadaceae (isolates:1; rSTs:1)
        • Salaquimonas (isolates:1; rSTs:1)
          • Salaquimonas pukyongi (isolates:1; rSTs:1)
      • Salinarimonadaceae (isolates:5; rSTs:4 tree)
        • Salinarimonas (isolates:3; rSTs:3 tree)
          • Salinarimonas ramus (isolates:1; rSTs:1)
          • Salinarimonas rosea (isolates:2; rSTs:2)
        • Saliniramus (isolates:2; rSTs:1)
          • Saliniramus fredricksonii (isolates:2; rSTs:1)
      • Segnochrobactraceae (isolates:2; rSTs:2)
        • Pseudoxanthobacter (isolates:1; rSTs:1)
          • Pseudoxanthobacter soli (isolates:1; rSTs:1)
        • Segnochrobactrum (isolates:1; rSTs:1)
          • Segnochrobactrum spirostomi (isolates:1; rSTs:1)
      • Stappiaceae (isolates:116; rSTs:99 tree)
        • Breoghania (isolates:3; rSTs:2)
          • Breoghania corrubedonensis (isolates:1; rSTs:1)
          • Breoghania sp. (isolates:2; rSTs:1)
        • Hongsoonwoonella (isolates:1; rSTs:1)
          • Hongsoonwoonella zoysiae (isolates:1; rSTs:1)
        • Labrenzia (isolates:10; rSTs:7 tree)
          • Labrenzia sp. (isolates:10; rSTs:7 tree)
        • Pannonibacter (isolates:14; rSTs:14 tree)
          • Pannonibacter anstelovis (isolates:2; rSTs:1)
          • Pannonibacter carbonis (isolates:1; rSTs:1)
          • Pannonibacter indicus (isolates:2; rSTs:1)
          • Pannonibacter phragmitetus (isolates:2; rSTs:1)
          • Pannonibacter sp. (isolates:7; rSTs:10 tree)
        • Pseudovibrio (isolates:31; rSTs:25 tree)
          • Pseudovibrio ascidiaceicola (isolates:2; rSTs:2)
          • Pseudovibrio axinellae (isolates:2; rSTs:1)
          • Pseudovibrio brasiliensis (isolates:2; rSTs:1)
          • Pseudovibrio denitrificans (isolates:2; rSTs:1)
          • Pseudovibrio exalbescens (isolates:3; rSTs:2)
          • Pseudovibrio flavus (isolates:1; rSTs:1)
          • Pseudovibrio hongkongensis (isolates:1; rSTs:1)
          • Pseudovibrio japonicus (isolates:1; rSTs:1)
          • Pseudovibrio sp. (isolates:16; rSTs:14 tree)
          • Pseudovibrio stylochi (isolates:1; rSTs:1)
        • Roseibium (isolates:38; rSTs:32 tree)
          • Roseibium aestuarii (isolates:1; rSTs:1)
          • Roseibium aggregatum (isolates:1; rSTs:1)
          • Roseibium album (isolates:5; rSTs:3 tree)
          • Roseibium alexandrii (isolates:2; rSTs:2)
          • Roseibium aquae (isolates:2; rSTs:1)
          • Roseibium denhamense (isolates:3; rSTs:1)
          • Roseibium hamelinense (isolates:2; rSTs:1)
          • Roseibium limicola (isolates:1; rSTs:1)
          • Roseibium litorale (isolates:1; rSTs:1)
          • Roseibium marinum (isolates:1; rSTs:1)
          • Roseibium polysiphoniae (isolates:2; rSTs:2)
          • Roseibium porphyridii (isolates:1; rSTs:1)
          • Roseibium salinum (isolates:1; rSTs:1)
          • Roseibium sediminicola (isolates:1; rSTs:1)
          • Roseibium sediminis (isolates:1; rSTs:1)
          • Roseibium sp. (isolates:12; rSTs:12 tree)
          • Roseibium suaedae (isolates:1; rSTs:1)
        • Stappia (isolates:19; rSTs:18 tree)
          • Stappia albiluteola (isolates:1; rSTs:1)
          • Stappia indica (isolates:5; rSTs:5 tree)
          • Stappia sediminis (isolates:1; rSTs:1)
          • Stappia sp. (isolates:8; rSTs:8 tree)
          • Stappia stellulata (isolates:2; rSTs:2)
          • Stappia taiwanensis (isolates:2; rSTs:1)
      • Tepidamorphaceae (isolates:4; rSTs:4 tree)
        • Lutibaculum (isolates:1; rSTs:1)
          • Lutibaculum baratangense (isolates:1; rSTs:1)
        • Microbaculum (isolates:2; rSTs:2)
          • Microbaculum marinisediminis (isolates:1; rSTs:1)
          • Microbaculum marinum (isolates:1; rSTs:1)
        • Tepidamorphus (isolates:1; rSTs:1)
          • Tepidamorphus gemmatus (isolates:1; rSTs:1)
      • Terrirubraceae (isolates:1)
        • Terrirubrum (isolates:1)
          • Terrarubrum flagellatum (isolates:1)
      • Xanthobacteraceae (isolates:84; rSTs:67 tree)
        • Ancylobacter (isolates:30; rSTs:28 tree)
          • Ancylobacter amanitiformis (isolates:1; rSTs:1)
          • Ancylobacter aquaticus (isolates:1; rSTs:1)
          • Ancylobacter crimeensis (isolates:1; rSTs:1)
          • Ancylobacter defluvii (isolates:2; rSTs:1)
          • Ancylobacter dichloromethanicus (isolates:2; rSTs:1)
          • Ancylobacter gelatini (isolates:1; rSTs:1)
          • Ancylobacter koreensis (isolates:1; rSTs:1)
          • Ancylobacter lacus (isolates:1; rSTs:1)
          • Ancylobacter mangrovi (isolates:2; rSTs:2)
          • Ancylobacter moscoviensis (isolates:1; rSTs:1)
          • Ancylobacter novellus (isolates:2; rSTs:1)
          • Ancylobacter oerskovii (isolates:1; rSTs:1)
          • Ancylobacter polymorphus (isolates:2; rSTs:2)
          • Ancylobacter pratisalsi (isolates:1; rSTs:1)
          • Ancylobacter radicis (isolates:1; rSTs:1)
          • Ancylobacter rudongensis (isolates:1; rSTs:1)
          • Ancylobacter sonchi (isolates:1; rSTs:1)
          • Ancylobacter sp. (isolates:6; rSTs:7 tree)
          • Ancylobacter tetraedralis (isolates:1; rSTs:1)
          • Ancylobacter vacuolatus (isolates:1; rSTs:1)
        • Aquabacter (isolates:5; rSTs:5 tree)
          • Aquabacter cavernae (isolates:1; rSTs:1)
          • Aquabacter sp. (isolates:3; rSTs:3 tree)
          • Aquabacter spiritensis (isolates:1; rSTs:1)
        • Azorhizobium (isolates:8; rSTs:5 tree)
          • Azorhizobium caulinodans (isolates:5; rSTs:2)
          • Azorhizobium doebereinerae (isolates:1; rSTs:1)
          • Azorhizobium oxalatiphilum (isolates:1; rSTs:1)
          • Azorhizobium sp. (isolates:1; rSTs:1)
        • Labrys (isolates:10; rSTs:10 tree)
          • Labrys miyagiensis (isolates:1; rSTs:1)
          • Labrys monachus (isolates:1; rSTs:1)
          • Labrys neptuniae (isolates:2; rSTs:2)
          • Labrys okinawensis (isolates:1; rSTs:1)
          • Labrys sp. (isolates:4; rSTs:4 tree)
          • Labrys wisconsinensis (isolates:1; rSTs:1)
        • Pseudolabrys (isolates:1; rSTs:1)
          • Pseudolabrys taiwanensis (isolates:1; rSTs:1)
        • Starkeya (isolates:1; rSTs:1 tree)
          • Starkeya sp. (isolates:1; rSTs:1 tree)
        • Xanthobacter (isolates:29; rSTs:17 tree)
          • Xanthobacter agilis (isolates:2; rSTs:1)
          • Xanthobacter aminoxidans (isolates:1; rSTs:1)
          • Xanthobacter autotrophicus (isolates:1; rSTs:1)
          • Xanthobacter dioxanivorans (isolates:1; rSTs:1)
          • Xanthobacter flavus (isolates:1; rSTs:1)
          • Xanthobacter oligotrophicus (isolates:2; rSTs:1)
          • Xanthobacter sp. (isolates:19; rSTs:10 tree)
          • Xanthobacter tagetidis (isolates:2; rSTs:1)
    • Hyphomonadales (isolates:37; rSTs:32 tree)
      • Hyphomonadaceae (isolates:37; rSTs:32 tree)
        • Candidatus Viadribacter (isolates:1; rSTs:1)
          • Candidatus Viadribacter manganicus (isolates:1; rSTs:1)
        • Henriciella (isolates:11; rSTs:9 tree)
          • Henriciella algicola (isolates:1; rSTs:1)
          • Henriciella aquimarina (isolates:1; rSTs:1)
          • Henriciella barbarensis (isolates:1; rSTs:1)
          • Henriciella litoralis (isolates:1; rSTs:1)
          • Henriciella marina (isolates:1; rSTs:1)
          • Henriciella mobilis (isolates:3; rSTs:2)
          • Henriciella pelagia (isolates:2; rSTs:1)
          • Henriciella sp. (isolates:1; rSTs:1)
        • Hirschia (isolates:3; rSTs:2)
          • Hirschia baltica (isolates:2; rSTs:1)
          • Hirschia maritima (isolates:1; rSTs:1)
        • Hyphomonas (isolates:20; rSTs:18 tree)
          • Hyphomonas adhaerens (isolates:1; rSTs:1)
          • Hyphomonas atlantica (isolates:1; rSTs:1)
          • Hyphomonas beringensis (isolates:1; rSTs:1)
          • Hyphomonas chukchiensis (isolates:1; rSTs:1)
          • Hyphomonas hirschiana (isolates:1; rSTs:1)
          • Hyphomonas jannaschiana (isolates:1; rSTs:1)
          • Hyphomonas johnsonii (isolates:1; rSTs:1)
          • Hyphomonas oceanitis (isolates:1; rSTs:1)
          • Hyphomonas pacifica (isolates:3; rSTs:2)
          • Hyphomonas polymorpha (isolates:1; rSTs:1)
          • Hyphomonas sediminis (isolates:1; rSTs:1)
          • Hyphomonas sp. (isolates:7; rSTs:6 tree)
        • Ponticaulis (isolates:1; rSTs:1)
          • Ponticaulis koreensis (isolates:1; rSTs:1)
        • Vitreimonas (isolates:1; rSTs:1)
          • Vitreimonas flagellata (isolates:1; rSTs:1)
    • Iodidimonadales (isolates:7; rSTs:5 tree)
      • Iodidimonadaceae (isolates:7; rSTs:5 tree)
        • Iodidimonas (isolates:7; rSTs:5 tree)
          • Iodidimonas gelatinilytica (isolates:2; rSTs:2)
          • Iodidimonas muriae (isolates:1; rSTs:1)
          • Iodidimonas nitroreducens (isolates:1; rSTs:1)
          • Iodidimonas sp. (isolates:3; rSTs:1)
    • Kordiimonadales (isolates:16; rSTs:14 tree)
      • Kordiimonadaceae (isolates:14; rSTs:12 tree)
        • Eilatimonas (isolates:1; rSTs:1)
          • Eilatimonas milleporae (isolates:1; rSTs:1)
        • Kordiimonas (isolates:12; rSTs:11 tree)
          • Kordiimonas aestuarii (isolates:1; rSTs:1)
          • Kordiimonas aquimaris (isolates:1; rSTs:1)
          • Kordiimonas gwangyangensis (isolates:2; rSTs:2)
          • Kordiimonas lacus (isolates:2; rSTs:1)
          • Kordiimonas laminariae (isolates:1; rSTs:1)
          • Kordiimonas lipolytica (isolates:1; rSTs:1)
          • Kordiimonas marina (isolates:1; rSTs:1)
          • Kordiimonas pumila (isolates:1; rSTs:1)
          • Kordiimonas sediminis (isolates:1; rSTs:1)
          • Kordiimonas sp. (isolates:1; rSTs:1)
        • Pseudokordiimonas (isolates:1)
          • Pseudokordiimonas caeni (isolates:1)
      • Temperatibacteraceae (isolates:2; rSTs:2)
        • Gimibacter (isolates:1; rSTs:1)
          • Gimibacter soli (isolates:1; rSTs:1)
        • Temperatibacter (isolates:1; rSTs:1)
          • Temperatibacter marinus (isolates:1; rSTs:1)
    • Magnetococcales (isolates:4; rSTs:4 tree)
      • Candidatus Magnetaquicoccaceae (isolates:1; rSTs:1)
        • Candidatus Magnetaquicoccus (isolates:1; rSTs:1)
          • Candidatus Magnetaquicoccus inordinatus (isolates:1; rSTs:1)
      • Magnetococcaceae (isolates:3; rSTs:3 tree)
        • Magnetococcus (isolates:2; rSTs:2)
          • Magnetococcus marinus (isolates:1; rSTs:1)
          • Magnetococcus sp. (isolates:1; rSTs:1)
        • Magnetofaba (isolates:1; rSTs:1)
          • Magnetofaba australis (isolates:1; rSTs:1)
    • Maricaulales (isolates:38; rSTs:32 tree)
      • Maricaulaceae (isolates:31; rSTs:25 tree)
        • Alkalicaulis (isolates:1; rSTs:1)
          • Alkalicaulis satelles (isolates:1; rSTs:1)
        • Euryhalocaulis (isolates:1; rSTs:1)
          • Euryhalocaulis caribicus (isolates:1; rSTs:1)
        • Glycocaulis (isolates:3; rSTs:2)
          • Glycocaulis albus (isolates:1; rSTs:1)
          • Glycocaulis alkaliphilus (isolates:2; rSTs:1)
        • Hyphobacterium (isolates:4; rSTs:2)
          • Hyphobacterium indicum (isolates:1; rSTs:1)
          • Hyphobacterium sp. (isolates:3; rSTs:1)
        • Maricaulis (isolates:8; rSTs:8 tree)
          • Maricaulis alexandrii (isolates:1; rSTs:1)
          • Maricaulis maris (isolates:3; rSTs:3 tree)
          • Maricaulis parjimensis (isolates:1; rSTs:1)
          • Maricaulis salignorans (isolates:1; rSTs:1)
          • Maricaulis sp. (isolates:1; rSTs:1)
          • Maricaulis virginensis (isolates:1; rSTs:1)
        • Marinicauda (isolates:7; rSTs:4 tree)
          • Marinicauda algicola (isolates:2; rSTs:1)
          • Marinicauda pacifica (isolates:3; rSTs:1)
          • Marinicauda salina (isolates:1; rSTs:1)
          • Marinicauda sp. (isolates:1; rSTs:1)
        • Oceanicaulis (isolates:6; rSTs:6 tree)
          • Oceanicaulis alexandrii (isolates:1; rSTs:1)
          • Oceanicaulis sp. (isolates:5; rSTs:5 tree)
        • Woodsholea (isolates:1; rSTs:1)
          • Woodsholea maritima (isolates:1; rSTs:1)
      • Robiginitomaculaceae (isolates:7; rSTs:7 tree)
        • Algimonas (isolates:3; rSTs:3 tree)
          • Algimonas ampicilliniresistens (isolates:1; rSTs:1)
          • Algimonas arctica (isolates:1; rSTs:1)
          • Algimonas porphyrae (isolates:1; rSTs:1)
        • Hellea (isolates:1; rSTs:1)
          • Hellea balneolensis (isolates:1; rSTs:1)
        • Litorimonas (isolates:2; rSTs:2)
          • Litorimonas cladophorae (isolates:1; rSTs:1)
          • Litorimonas taeanensis (isolates:1; rSTs:1)
        • Robiginitomaculum (isolates:1; rSTs:1)
          • Robiginitomaculum antarcticum (isolates:1; rSTs:1)
    • Micropepsales (isolates:6; rSTs:3 tree)
      • Micropepsaceae (isolates:6; rSTs:3 tree)
        • Rhizomicrobium (isolates:6; rSTs:3 tree)
          • Rhizomicrobium electricum (isolates:2; rSTs:1)
          • Rhizomicrobium palustre (isolates:2; rSTs:1)
          • Rhizomicrobium sp. (isolates:2; rSTs:1)
    • Minwuiales (isolates:6; rSTs:3 tree)
      • Minwuiaceae (isolates:6; rSTs:3 tree)
        • Minwuia (isolates:6; rSTs:3 tree)
          • Minwuia sp. (isolates:4; rSTs:2)
          • Minwuia thermotolerans (isolates:2; rSTs:1)
    • Parvularculales (isolates:16; rSTs:12 tree)
      • Parvularculaceae (isolates:16; rSTs:12 tree)
        • Amphiplicatus (isolates:2; rSTs:1)
          • Amphiplicatus metriothermophilus (isolates:2; rSTs:1)
        • Aquisalinus (isolates:5; rSTs:2)
          • Aquisalinus flavus (isolates:3; rSTs:1)
          • Aquisalinus luteolus (isolates:2; rSTs:1)
        • Hyphococcus (isolates:1; rSTs:1)
          • Hyphococcus flavus (isolates:1; rSTs:1)
        • Marinicaulis (isolates:1; rSTs:1)
          • Marinicaulis flavus (isolates:1; rSTs:1)
        • Parvularcula (isolates:7; rSTs:7 tree)
          • Parvularcula bermudensis (isolates:1; rSTs:1)
          • Parvularcula dongshanensis (isolates:1; rSTs:1)
          • Parvularcula lutaonensis (isolates:1; rSTs:1)
          • Parvularcula marina (isolates:1; rSTs:1)
          • Parvularcula maris (isolates:1; rSTs:1)
          • Parvularcula mediterranea (isolates:1; rSTs:1)
          • Parvularcula oceani (isolates:1; rSTs:1)
    • Rhodobacterales (isolates:1997; rSTs:1485)
      • Neomegalonemataceae (isolates:1; rSTs:1)
        • Neomegalonema (isolates:1; rSTs:1)
          • Neomegalonema perideroedes (isolates:1; rSTs:1)
      • Paracoccaceae (isolates:825; rSTs:629 tree)
        • Abyssibius (isolates:1; rSTs:1)
          • Abyssibius alkaniclasticus (isolates:1; rSTs:1)
        • Acidimangrovimonas (isolates:1; rSTs:1)
          • Acidimangrovimonas sediminis (isolates:1; rSTs:1)
        • Aestuariibius (isolates:2; rSTs:2)
          • Aestuariibius insulae (isolates:1; rSTs:1)
          • Aestuariibius sp. (isolates:1; rSTs:1)
        • Aestuariivita (isolates:1; rSTs:1)
          • Aestuariivita boseongensis (isolates:1; rSTs:1)
        • Agaricicola (isolates:1; rSTs:1)
          • Agaricicola taiwanensis (isolates:1; rSTs:1)
        • Albibacillus (isolates:1; rSTs:1)
          • Albibacillus kandeliae (isolates:1; rSTs:1)
        • Albidovulum (isolates:1; rSTs:1)
          • Albidovulum inexpectatum (isolates:1; rSTs:1)
        • Albimonas (isolates:3; rSTs:3 tree)
          • Albimonas donghaensis (isolates:1; rSTs:1)
          • Albimonas pacifica (isolates:1; rSTs:1)
          • Albimonas sp. (isolates:1; rSTs:1)
        • Alexandriicola (isolates:1; rSTs:1)
          • Alexandriicola marinus (isolates:1; rSTs:1)
        • Algicella (isolates:1; rSTs:1)
          • Algicella marina (isolates:1; rSTs:1)
        • Aliiroseovarius (isolates:44; rSTs:31 tree)
          • Aliiroseovarius crassostreae (isolates:10; rSTs:10 tree)
          • Aliiroseovarius halocynthiae (isolates:2; rSTs:1)
          • Aliiroseovarius lamellibrachiae (isolates:1; rSTs:1)
          • Aliiroseovarius marinus (isolates:2; rSTs:2)
          • Aliiroseovarius pelagivivens (isolates:1; rSTs:1)
          • Aliiroseovarius salicola (isolates:1; rSTs:1)
          • Aliiroseovarius sediminilitoris (isolates:1; rSTs:1)
          • Aliiroseovarius sediminis (isolates:1; rSTs:1)
          • Aliiroseovarius sp. (isolates:23; rSTs:11 tree)
          • Aliiroseovarius subalbicans (isolates:1; rSTs:1)
          • Aliiroseovarius zhejiangensis (isolates:1; rSTs:1)
        • Aliishimia (isolates:1; rSTs:1)
          • Aliishimia ponticola (isolates:1; rSTs:1)
        • Alkalilacustris (isolates:1; rSTs:1)
          • Alkalilacustris brevis (isolates:1; rSTs:1)
        • Allgaiera (isolates:2; rSTs:1)
          • Allgaiera indica (isolates:2; rSTs:1)
        • Allosediminivita (isolates:2; rSTs:1)
          • Allosediminivita pacifica (isolates:2; rSTs:1)
        • Alterinioella (isolates:1; rSTs:1)
          • Alterinioella nitratireducens (isolates:1; rSTs:1)
        • Amaricoccus (isolates:2; rSTs:2)
          • Amaricoccus macauensis (isolates:1; rSTs:1)
          • Amaricoccus solimangrovi (isolates:1; rSTs:1)
        • Amylibacter (isolates:4; rSTs:4 tree)
          • Amylibacter cionae (isolates:1; rSTs:1)
          • Amylibacter kogurei (isolates:1; rSTs:1)
          • Amylibacter marinus (isolates:1; rSTs:1)
          • Amylibacter ulvae (isolates:1; rSTs:1)
        • Anianabacter (isolates:1; rSTs:1)
          • Anianabacter salinae (isolates:1; rSTs:1)
        • Antarcticimicrobium (isolates:2; rSTs:2)
          • Antarcticimicrobium luteum (isolates:1; rSTs:1)
          • Antarcticimicrobium sediminis (isolates:1; rSTs:1)
        • Aquicoccus (isolates:2; rSTs:2)
          • Aquicoccus porphyridii (isolates:2; rSTs:2)
        • Aquimixticola (isolates:1; rSTs:1)
          • Aquimixticola soesokkakensis (isolates:1; rSTs:1)
        • Arenibacterium (isolates:2; rSTs:2)
          • Arenibacterium arenosum (isolates:1; rSTs:1)
          • Arenibacterium halophilum (isolates:1; rSTs:1)
        • Ascidiaceihabitans (isolates:1; rSTs:1)
          • Ascidiaceihabitans donghaensis (isolates:1; rSTs:1)
        • Boseongicola (isolates:1; rSTs:1)
          • Boseongicola aestuarii (isolates:1; rSTs:1)
        • Brevirhabdus (isolates:3; rSTs:1)
          • Brevirhabdus pacifica (isolates:3; rSTs:1)
        • Cereibacter (isolates:49; rSTs:23 tree)
          • Cereibacter azotoformans (isolates:5; rSTs:4 tree)
          • Cereibacter changlensis (isolates:3; rSTs:2)
          • Cereibacter johrii (isolates:4; rSTs:3 tree)
          • Cereibacter ovatus (isolates:1; rSTs:1)
          • Cereibacter sediminicola (isolates:1; rSTs:1)
          • Cereibacter sphaeroides (isolates:35; rSTs:12 tree)
        • Chachezhania (isolates:2; rSTs:2)
          • Chachezhania antarctica (isolates:1; rSTs:1)
          • Chachezhania sediminis (isolates:1; rSTs:1)
        • Cochlodiniinecator (isolates:1; rSTs:1)
          • Cochlodiniinecator piscidefendens (isolates:1; rSTs:1)
        • Cognatishimia (isolates:6; rSTs:6 tree)
          • Cognatishimia activa (isolates:2; rSTs:2)
          • Cognatishimia maritima (isolates:1; rSTs:1)
          • Cognatishimia sp. (isolates:3; rSTs:3 tree)
        • Cognatiyoonia (isolates:2; rSTs:2)
          • Cognatiyoonia koreensis (isolates:1; rSTs:1)
          • Cognatiyoonia sediminum (isolates:1; rSTs:1)
        • Coraliihabitans (isolates:1; rSTs:1)
          • Coraliihabitans acroporae (isolates:1; rSTs:1)
        • Cribrihabitans (isolates:2; rSTs:1)
          • Cribrihabitans marinus (isolates:2; rSTs:1)
        • Cypionkella (isolates:2; rSTs:2)
          • Cypionkella aquatica (isolates:1; rSTs:1)
          • Cypionkella psychrotolerans (isolates:1; rSTs:1)
        • Defluviimonas (isolates:11; rSTs:11 tree)
          • Defluviimonas aestuarii (isolates:1; rSTs:1)
          • Defluviimonas aquaemixtae (isolates:1; rSTs:1)
          • Defluviimonas denitrificans (isolates:1; rSTs:1)
          • Defluviimonas salinarum (isolates:1; rSTs:1)
          • Defluviimonas sediminis (isolates:1; rSTs:1)
          • Defluviimonas sp. (isolates:6; rSTs:6 tree)
        • Falsigemmobacter (isolates:2; rSTs:2)
          • Falsigemmobacter faecalis (isolates:1; rSTs:1)
          • Falsigemmobacter intermedius (isolates:1; rSTs:1)
        • Falsirhodobacter (isolates:5; rSTs:5 tree)
          • Falsirhodobacter algicola (isolates:1; rSTs:1)
          • Falsirhodobacter deserti (isolates:1; rSTs:1)
          • Falsirhodobacter halotolerans (isolates:1; rSTs:1)
          • Falsirhodobacter sp. (isolates:2; rSTs:2 tree)
        • Falsiroseicyclus (isolates:2; rSTs:1)
          • Pseudoroseicyclus tamaricis (isolates:2; rSTs:1)
        • Fertoeibacter (isolates:1; rSTs:1)
          • Fertoeibacter niger (isolates:1; rSTs:1)
        • Flavimaricola (isolates:1; rSTs:1)
          • Flavimaricola marinus (isolates:1; rSTs:1)
        • Fluviibacterium (isolates:1; rSTs:1)
          • Fluviibacterium aquatile (isolates:1; rSTs:1)
        • Fontisubflavum (isolates:1; rSTs:1)
          • Fontisubflavum oceani (isolates:1; rSTs:1)
        • Frigidibacter (isolates:9; rSTs:5 tree)
          • Frigidibacter albus (isolates:4; rSTs:1)
          • Frigidibacter mobilis (isolates:1; rSTs:1)
          • Frigidibacter oleivorans (isolates:1; rSTs:1)
          • Frigidibacter sp. (isolates:3; rSTs:2 tree)
        • Fuscibacter (isolates:1; rSTs:1)
          • Fuscibacter oryzae (isolates:1; rSTs:1)
        • Fuscovulum (isolates:3; rSTs:3 tree)
          • Fuscovulum blasticum (isolates:2; rSTs:2)
          • Fuscovulum ytuae (isolates:1; rSTs:1)
        • Gemmobacter (isolates:22; rSTs:18 tree)
          • Gemmobacter aestuarii (isolates:1; rSTs:1)
          • Gemmobacter aquarius (isolates:1; rSTs:1)
          • Gemmobacter aquaticus (isolates:2; rSTs:1)
          • Gemmobacter aquatilis (isolates:1; rSTs:1)
          • Gemmobacter caeni (isolates:2; rSTs:1)
          • Gemmobacter caeruleus (isolates:1; rSTs:1)
          • Gemmobacter denitrificans (isolates:1; rSTs:1)
          • Gemmobacter fulvus (isolates:3; rSTs:2)
          • Gemmobacter lanyuensis (isolates:1; rSTs:1)
          • Gemmobacter lutimaris (isolates:1; rSTs:1)
          • Gemmobacter megaterium (isolates:2; rSTs:1)
          • Gemmobacter nanjingensis (isolates:1; rSTs:1)
          • Gemmobacter nectariphilus (isolates:1; rSTs:1)
          • Gemmobacter serpentinus (isolates:1; rSTs:1)
          • Gemmobacter sp. (isolates:1; rSTs:1)
          • Gemmobacter straminiformis (isolates:1; rSTs:1)
          • Gemmobacter tilapiae (isolates:1; rSTs:1)
        • Gymnodinialimonas (isolates:4; rSTs:4 tree)
          • Gymnodinialimonas ceratoperidinii (isolates:1; rSTs:1)
          • Gymnodinialimonas phycosphaerae (isolates:1; rSTs:1)
          • Gymnodinialimonas sp. (isolates:2; rSTs:2)
        • Haematobacter (isolates:8; rSTs:6 tree)
          • Haematobacter genomosp. 1 (isolates:1; rSTs:1)
          • Haematobacter massiliensis (isolates:4; rSTs:3 tree)
          • Haematobacter missouriensis (isolates:3; rSTs:2)
        • Halocynthiibacter (isolates:5; rSTs:4 tree)
          • Candidatus Halocynthiibacter alkanivorans (isolates:1; rSTs:1)
          • Halocynthiibacter halioticoli (isolates:1; rSTs:1)
          • Halocynthiibacter namhaensis (isolates:1; rSTs:1)
          • Halocynthiibacter sp. (isolates:2; rSTs:1)
        • Halovulum (isolates:2; rSTs:2)
          • Halovulum dunhuangense (isolates:1; rSTs:1)
          • Halovulum marinum (isolates:1; rSTs:1)
        • Histidinibacterium (isolates:2; rSTs:2)
          • Histidinibacterium aquaticum (isolates:1; rSTs:1)
          • Histidinibacterium lentulum (isolates:1; rSTs:1)
        • Jhaorihella (isolates:1; rSTs:1)
          • Jhaorihella thermophila (isolates:1; rSTs:1)
        • Kandeliimicrobium (isolates:1; rSTs:1)
          • Kandeliimicrobium roseum (isolates:1; rSTs:1)
        • Kangsaoukella (isolates:1; rSTs:1)
          • Kangsaoukella pontilimi (isolates:1; rSTs:1)
        • Limibaculum (isolates:1; rSTs:1)
          • Limibaculum sediminis (isolates:1; rSTs:1)
        • Limimaricola (isolates:9; rSTs:9 tree)
          • Limimaricola cinnabarinus (isolates:1; rSTs:1)
          • Limimaricola hongkongensis (isolates:1; rSTs:1)
          • Limimaricola litoreus (isolates:1; rSTs:1)
          • Limimaricola pyoseonensis (isolates:1; rSTs:1)
          • Limimaricola soesokkakensis (isolates:2; rSTs:1)
          • Limimaricola sp. (isolates:1; rSTs:2 tree)
          • Limimaricola variabilis (isolates:2; rSTs:2)
        • Litorivita (isolates:2; rSTs:2)
          • Litorivita pollutaquae (isolates:1; rSTs:1)
          • Litorivita sp. (isolates:1; rSTs:1)
        • Maliponia (isolates:1; rSTs:1)
          • Maliponia aquimaris (isolates:1; rSTs:1)
        • Mangrovicoccus (isolates:3; rSTs:2)
          • Mangrovicoccus algicola (isolates:1; rSTs:1)
          • Mangrovicoccus sp. (isolates:1; rSTs:1)
          • Mangrovicoccus ximenensis (isolates:1)
        • Marimonas (isolates:2; rSTs:2)
          • Marimonas arenosa (isolates:1; rSTs:1)
          • Marimonas lutisali (isolates:1; rSTs:1)
        • Marinibacterium (isolates:2; rSTs:2)
          • Marinibacterium anthonyi (isolates:1; rSTs:1)
          • Marinibacterium profundimaris (isolates:1; rSTs:1)
        • Marinosulfonomonas (isolates:1)
          • Marinosulfonomonas sp. (isolates:1)
        • Marivivens (isolates:5; rSTs:5 tree)
          • Marivivens aquimaris (isolates:1; rSTs:1)
          • Marivivens donghaensis (isolates:1; rSTs:1)
          • Marivivens niveibacter (isolates:1; rSTs:1)
          • Marivivens sp. (isolates:2; rSTs:2)
        • Meinhardsimonia (isolates:2; rSTs:1)
          • Meinhardsimonia xiamenensis (isolates:2; rSTs:1)
        • Meridianimarinicoccus (isolates:1; rSTs:1)
          • Meridianimarinicoccus roseus (isolates:1; rSTs:1)
        • Monaibacterium (isolates:1; rSTs:1)
          • Monaibacterium marinum (isolates:1; rSTs:1)
        • Natronohydrobacter (isolates:1; rSTs:1)
          • Natronohydrobacter thiooxidans (isolates:1; rSTs:1)
        • Neotabrizicola (isolates:1; rSTs:1)
          • Neotabrizicola shimadae (isolates:1; rSTs:1)
        • Neptunicoccus (isolates:1; rSTs:1)
          • Neptunicoccus sediminis (isolates:1; rSTs:1)
        • Nioella (isolates:4; rSTs:4 tree)
          • Nioella nitratireducens (isolates:1; rSTs:1)
          • Nioella ostreopsis (isolates:1; rSTs:1)
          • Nioella sediminis (isolates:1; rSTs:1)
          • Nioella sp. (isolates:1; rSTs:1)
        • Oceanibium (isolates:1; rSTs:1)
          • Oceanibium sediminis (isolates:1; rSTs:1)
        • Oceanicella (isolates:3; rSTs:2)
          • Oceanicella actignis (isolates:3; rSTs:2)
        • Oceaniglobus (isolates:3; rSTs:3 tree)
          • Oceaniglobus ichthyenteri (isolates:1; rSTs:1)
          • Oceaniglobus indicus (isolates:1; rSTs:1)
          • Oceaniglobus trochenteri (isolates:1; rSTs:1)
        • Oceanomicrobium (isolates:1; rSTs:1)
          • Oceanomicrobium pacificus (isolates:1; rSTs:1)
        • Ostreiculturibacter (isolates:2; rSTs:2)
          • Ostreiculturibacter nitratireducens (isolates:2; rSTs:2)
        • Pacificitalea (isolates:2; rSTs:1)
          • Pacificitalea manganoxidans (isolates:2; rSTs:1)
        • Paenihalocynthiibacter (isolates:1; rSTs:1)
          • Paenihalocynthiibacter styelae (isolates:1; rSTs:1)
        • Paenirhodobacter (isolates:1; rSTs:1)
          • Paenirhodobacter enshiensis (isolates:1; rSTs:1)
        • Paracoccus (isolates:191; rSTs:153 tree)
          • Paracoccus acridae (isolates:1; rSTs:1)
          • Paracoccus aeridis (isolates:1; rSTs:1)
          • Paracoccus aerius (isolates:2; rSTs:1)
          • Paracoccus aerodenitrificans (isolates:1; rSTs:1)
          • Paracoccus aestuarii (isolates:2; rSTs:1)
          • Paracoccus aestuariivivens (isolates:1; rSTs:1)
          • Paracoccus albicereus (isolates:1; rSTs:1)
          • Paracoccus albus (isolates:1; rSTs:1)
          • Paracoccus alcaliphilus (isolates:2; rSTs:1)
          • Paracoccus alkanivorans (isolates:1; rSTs:1)
          • Paracoccus alkenifer (isolates:1; rSTs:1)
          • Paracoccus aminophilus (isolates:1; rSTs:1)
          • Paracoccus aminovorans (isolates:4; rSTs:3 tree)
          • Paracoccus amoyensis (isolates:1; rSTs:1)
          • Paracoccus aurantiacus (isolates:1; rSTs:1)
          • Paracoccus beibuensis (isolates:1; rSTs:1)
          • Paracoccus binzhouensis (isolates:1; rSTs:1)
          • Paracoccus bogoriensis (isolates:1; rSTs:1)
          • Paracoccus caeni (isolates:1; rSTs:1)
          • Paracoccus chinensis (isolates:1; rSTs:1)
          • Paracoccus contaminans (isolates:1; rSTs:1)
          • Paracoccus denitrificans (isolates:12; rSTs:5 tree)
          • Paracoccus everestensis (isolates:1; rSTs:1)
          • Paracoccus fistulariae (isolates:2; rSTs:1)
          • Paracoccus fontiphilus (isolates:1; rSTs:1)
          • Paracoccus gahaiensis (isolates:1; rSTs:1)
          • Paracoccus haematequi (isolates:1; rSTs:1)
          • Paracoccus haeundaensis (isolates:1; rSTs:1)
          • Paracoccus halophilus (isolates:2; rSTs:1)
          • Paracoccus hibiscisoli (isolates:1; rSTs:1)
          • Paracoccus homiensis (isolates:1; rSTs:1)
          • Paracoccus indicus (isolates:1; rSTs:1)
          • Paracoccus isoporae (isolates:1; rSTs:1)
          • Paracoccus jeotgali (isolates:1; rSTs:1)
          • Paracoccus kondratievae (isolates:2; rSTs:2)
          • Paracoccus laeviglucosivorans (isolates:2; rSTs:1)
          • Paracoccus liaowanqingii (isolates:2; rSTs:2)
          • Paracoccus lichenicola (isolates:1; rSTs:1)
          • Paracoccus limosus (isolates:1; rSTs:1)
          • Paracoccus litorisediminis (isolates:1; rSTs:1)
          • Paracoccus luteus (isolates:1; rSTs:1)
          • Paracoccus lutimaris (isolates:1; rSTs:1)
          • Paracoccus marcusii (isolates:3; rSTs:3 tree)
          • Paracoccus marinaquae (isolates:1; rSTs:1)
          • Paracoccus marinus (isolates:1; rSTs:1)
          • Paracoccus maritimus (isolates:1; rSTs:1)
          • Paracoccus methylarcula (isolates:1; rSTs:1)
          • Paracoccus methylovorus (isolates:1; rSTs:1)
          • Paracoccus mutanolyticus (isolates:1; rSTs:1)
          • Paracoccus nototheniae (isolates:1; rSTs:1)
          • Paracoccus onchidii (isolates:1; rSTs:1)
          • Paracoccus onubensis (isolates:2; rSTs:2)
          • Paracoccus pantotrophus (isolates:10; rSTs:7 tree)
          • Paracoccus ravus (isolates:1; rSTs:1)
          • Paracoccus rhizosphaerae (isolates:1; rSTs:1)
          • Paracoccus salipaludis (isolates:1; rSTs:1)
          • Paracoccus saliphilus (isolates:1; rSTs:1)
          • Paracoccus salsus (isolates:1; rSTs:1)
          • Paracoccus sanguinis (isolates:6; rSTs:4 tree)
          • Paracoccus sediminicola (isolates:1; rSTs:1)
          • Paracoccus sediminilitoris (isolates:1; rSTs:1)
          • Paracoccus sediminis (isolates:2; rSTs:1)
          • Paracoccus seriniphilus (isolates:2; rSTs:1)
          • Paracoccus shandongensis (isolates:1; rSTs:1)
          • Paracoccus shanxieyensis (isolates:2; rSTs:1)
          • Paracoccus siganidrum (isolates:2; rSTs:1)
          • Paracoccus solventivorans (isolates:1; rSTs:1)
          • Paracoccus sp. (isolates:51; rSTs:43 tree)
          • Paracoccus sphaerophysae (isolates:1; rSTs:1)
          • Paracoccus stylophorae (isolates:1; rSTs:1)
          • Paracoccus subflavus (isolates:1; rSTs:1)
          • Paracoccus sulfuroxidans (isolates:2; rSTs:1)
          • Paracoccus suum (isolates:1; rSTs:1)
          • Paracoccus tegillarcae (isolates:1; rSTs:1)
          • Paracoccus thiocyanatus (isolates:3; rSTs:2)
          • Paracoccus tibetensis (isolates:1; rSTs:1)
          • Paracoccus versutus (isolates:7; rSTs:5 tree)
          • Paracoccus xiamenensis (isolates:1; rSTs:1)
          • Paracoccus yeei (isolates:9; rSTs:6 tree)
          • Paracoccus zeaxanthinifaciens (isolates:1; rSTs:1)
          • Paracoccus zhejiangensis (isolates:1; rSTs:1)
        • Pararhodobacter (isolates:7; rSTs:6 tree)
          • Pararhodobacter aggregans (isolates:2; rSTs:1)
          • Pararhodobacter marinus (isolates:1; rSTs:1)
          • Pararhodobacter oceanensis (isolates:1; rSTs:1)
          • Pararhodobacter sp. (isolates:1; rSTs:1)
          • Pararhodobacter zhoushanensis (isolates:2; rSTs:2)
        • Parasedimentitalea (isolates:6; rSTs:5 tree)
          • Parasedimentitalea denitrificans (isolates:1; rSTs:1)
          • Parasedimentitalea huanghaiensis (isolates:1; rSTs:1)
          • Parasedimentitalea marina (isolates:1; rSTs:1)
          • Parasedimentitalea maritima (isolates:1; rSTs:1)
          • Parasedimentitalea psychrophila (isolates:2; rSTs:1)
        • Paroceanicella (isolates:1; rSTs:1)
          • Paroceanicella profunda (isolates:1; rSTs:1)
        • Pelagivirga (isolates:1; rSTs:1)
          • Pelagivirga sediminicola (isolates:1; rSTs:1)
        • Pelagovum (isolates:2; rSTs:1)
          • Pelagovum pacificum (isolates:2; rSTs:1)
        • Phaeovulum (isolates:6; rSTs:3 tree)
          • Phaeovulum sp. (isolates:1; rSTs:1)
          • Phaeovulum veldkampii (isolates:3; rSTs:1)
          • Phaeovulum vinaykumarii (isolates:2; rSTs:1)
        • Phycocomes (isolates:1; rSTs:1)
          • Phycocomes zhengii (isolates:1; rSTs:1)
        • Pikeienuella (isolates:2; rSTs:2)
          • Pikeienuella piscinae (isolates:1; rSTs:1)
          • Pikeienuella sp. (isolates:1; rSTs:1)
        • Planktomarina (isolates:1; rSTs:1)
          • Planktomarina temperata (isolates:1; rSTs:1)
        • Planktotalea (isolates:3; rSTs:2 tree)
          • Planktotalea arctica (isolates:1; rSTs:1)
          • Planktotalea frisia (isolates:2; rSTs:1)
        • Polymorphum (isolates:1; rSTs:1)
          • Polymorphum gilvum (isolates:1; rSTs:1)
        • Pontibrevibacter (isolates:2; rSTs:2)
          • Pontibrevibacter nitratireducens (isolates:2; rSTs:2)
        • Pontivivens (isolates:3; rSTs:2)
          • Pontivivens insulae (isolates:2; rSTs:1)
          • Pontivivens ytuae (isolates:1; rSTs:1)
        • Profundibacter (isolates:1; rSTs:1)
          • Profundibacter amoris (isolates:1; rSTs:1)
        • Pseudaestuariivita (isolates:2; rSTs:2)
          • Pseudaestuariivita atlantica (isolates:1; rSTs:1)
          • Pseudaestuariivita rosea (isolates:1; rSTs:1)
        • Pseudodonghicola (isolates:3; rSTs:2)
          • Pseudodonghicola flavimaris (isolates:1; rSTs:1)
          • Pseudodonghicola xiamenensis (isolates:2; rSTs:1)
        • Pseudogemmobacter (isolates:4; rSTs:4 tree)
          • Pseudogemmobacter bohemicus (isolates:1; rSTs:1)
          • Pseudogemmobacter faecipullorum (isolates:1; rSTs:1)
          • Pseudogemmobacter hezensis (isolates:1; rSTs:1)
          • Pseudogemmobacter humi (isolates:1; rSTs:1)
        • Pseudohalocynthiibacter (isolates:2; rSTs:2)
          • Pseudohalocynthiibacter aestuariivivens (isolates:1; rSTs:1)
          • Pseudohalocynthiibacter sp. (isolates:1; rSTs:1)
        • Pseudooceanicola (isolates:22; rSTs:18 tree)
          • Pseudooceanicola aestuarii (isolates:1; rSTs:1)
          • Pseudooceanicola algae (isolates:1; rSTs:1)
          • Pseudooceanicola antarcticus (isolates:2; rSTs:1)
          • Pseudooceanicola atlanticus (isolates:1; rSTs:1)
          • Pseudooceanicola batsensis (isolates:1; rSTs:1)
          • Pseudooceanicola endophyticus (isolates:1; rSTs:1)
          • Pseudooceanicola lipolyticus (isolates:1; rSTs:1)
          • Pseudooceanicola marinus (isolates:3; rSTs:2)
          • Pseudooceanicola nanhaiensis (isolates:2; rSTs:1)
          • Pseudooceanicola nitratireducens (isolates:5; rSTs:4 tree)
          • Pseudooceanicola onchidii (isolates:1; rSTs:1)
          • Pseudooceanicola sediminis (isolates:1; rSTs:1)
          • Pseudooceanicola sp. (isolates:1; rSTs:1)
          • Pseudooceanicola spongiae (isolates:1; rSTs:1)
        • Pseudooctadecabacter (isolates:1; rSTs:1)
          • Pseudooctadecabacter jejudonensis (isolates:1; rSTs:1)
        • Pseudophaeobacter (isolates:6; rSTs:6 tree)
          • Pseudophaeobacter arcticus (isolates:2; rSTs:2)
          • Pseudophaeobacter flagellatus (isolates:1; rSTs:1)
          • Pseudophaeobacter leonis (isolates:1; rSTs:1)
          • Pseudophaeobacter profundi (isolates:1; rSTs:1)
          • Pseudophaeobacter sp. (isolates:1; rSTs:1)
        • Pseudoprimorskyibacter (isolates:1; rSTs:1)
          • Pseudoprimorskyibacter insulae (isolates:1; rSTs:1)
        • Pseudorhodobacter (isolates:8; rSTs:6 tree)
          • Pseudorhodobacter antarcticus (isolates:2; rSTs:1)
          • Pseudorhodobacter aquimaris (isolates:1; rSTs:1)
          • Pseudorhodobacter ferrugineus (isolates:2; rSTs:1)
          • Pseudorhodobacter sp. (isolates:1; rSTs:1)
          • Pseudorhodobacter turbinis (isolates:1; rSTs:1)
          • Pseudorhodobacter wandonensis (isolates:1; rSTs:1)
        • Pseudoroseicyclus (isolates:1; rSTs:1)
          • Pseudoroseicyclus aestuarii (isolates:1; rSTs:1)
        • Pseudotabrizicola (isolates:6; rSTs:6 tree)
          • Pseudotabrizicola algicola (isolates:1; rSTs:1)
          • Pseudotabrizicola alkalilacus (isolates:1; rSTs:1)
          • Pseudotabrizicola formosa (isolates:1; rSTs:1)
          • Pseudotabrizicola sediminis (isolates:1; rSTs:1)
          • Pseudotabrizicola sp. (isolates:2; rSTs:2)
        • Pseudothioclava (isolates:1; rSTs:1)
          • Pseudothioclava arenosa (isolates:1; rSTs:1)
        • Psychromarinibacter (isolates:2; rSTs:2)
          • Psychromarinibacter halotolerans (isolates:1; rSTs:1)
          • Psychromarinibacter sediminicola (isolates:1; rSTs:1)
        • Pukyongiella (isolates:1; rSTs:1)
          • Pukyongiella litopenaei (isolates:1; rSTs:1)
        • Puniceibacterium (isolates:3; rSTs:3 tree)
          • Puniceibacterium antarcticum (isolates:1; rSTs:1)
          • Puniceibacterium confluentis (isolates:1; rSTs:1)
          • Puniceibacterium sediminis (isolates:1; rSTs:1)
        • Qingshengfaniella (isolates:1; rSTs:1)
          • Qingshengfaniella alkalisoli (isolates:1; rSTs:1)
        • Rhabdonatronobacter (isolates:1; rSTs:1)
          • Rhabdonatronobacter sediminivivens (isolates:1; rSTs:1)
        • Rhodobacter (isolates:31; rSTs:21 tree)
          • Candidatus Rhodobacter lobularis (isolates:1; rSTs:1)
          • Rhodobacter aestuarii (isolates:2; rSTs:1)
          • Rhodobacter amnigenus (isolates:2; rSTs:1)
          • Rhodobacter calidifons (isolates:1; rSTs:1)
          • Rhodobacter capsulatus (isolates:16; rSTs:9 tree)
          • Rhodobacter kunshanensis (isolates:1; rSTs:1)
          • Rhodobacter maris (isolates:1; rSTs:1)
          • Rhodobacter ruber (isolates:1; rSTs:1)
          • Rhodobacter sp. (isolates:3; rSTs:2 tree)
          • Rhodobacter viridis (isolates:1; rSTs:1)
          • Rhodobacter xanthinilyticus (isolates:1; rSTs:1)
          • Rhodobacter xinxiangensis (isolates:1; rSTs:1)
        • Rhodobaculum (isolates:1; rSTs:1)
          • Rhodobaculum claviforme (isolates:1; rSTs:1)
        • Rhodophyticola (isolates:2; rSTs:2 tree)
          • Rhodophyticola porphyridii (isolates:1; rSTs:1)
          • Rhodophyticola sp. (isolates:1; rSTs:1)
        • Rhodosalinus (isolates:2; rSTs:2)
          • Rhodosalinus halophilus (isolates:1; rSTs:1)
          • Rhodosalinus sediminis (isolates:1; rSTs:1)
        • Rhodovulum (isolates:42; rSTs:28 tree)
          • Rhodovulum adriaticum (isolates:2; rSTs:1)
          • Rhodovulum bhavnagarense (isolates:1; rSTs:1)
          • Rhodovulum euryhalinum (isolates:1; rSTs:1)
          • Rhodovulum imhoffii (isolates:2; rSTs:1)
          • Rhodovulum kholense (isolates:1; rSTs:1)
          • Rhodovulum marinum (isolates:1; rSTs:1)
          • Rhodovulum robiginosum (isolates:1; rSTs:1)
          • Rhodovulum sp. (isolates:4; rSTs:4 tree)
          • Rhodovulum steppense (isolates:1; rSTs:1)
          • Rhodovulum strictum (isolates:2; rSTs:1)
          • Rhodovulum sulfidophilum (isolates:21; rSTs:11 tree)
          • Rhodovulum tesquicola (isolates:1; rSTs:1)
          • Rhodovulum viride (isolates:1; rSTs:1)
          • Rhodovulum visakhapatnamense (isolates:3; rSTs:2)
        • Roseibaca (isolates:5; rSTs:4 tree)
          • Roseibaca calidilacus (isolates:2; rSTs:1)
          • Roseibaca domitiana (isolates:1; rSTs:1)
          • Roseibaca ekhonensis (isolates:1; rSTs:1)
          • Roseibaca sp. (isolates:1; rSTs:1)
        • Roseicitreum (isolates:2; rSTs:1)
          • Roseicitreum antarcticum (isolates:2; rSTs:1)
        • Roseinatronobacter (isolates:9; rSTs:5 tree)
          • Roseinatronobacter alkalisoli (isolates:1; rSTs:1)
          • Roseinatronobacter bogoriensis (isolates:4; rSTs:1)
          • Roseinatronobacter monicus (isolates:1; rSTs:1)
          • Roseinatronobacter sp. (isolates:1; rSTs:1)
          • Roseinatronobacter thiooxidans (isolates:2; rSTs:1)
        • Roseitranquillus (isolates:1; rSTs:1)
          • Roseitranquillus sediminis (isolates:1; rSTs:1)
        • Rubricella (isolates:1; rSTs:1)
          • Rubricella aquisinus (isolates:1; rSTs:1)
        • Rubrimonas (isolates:1; rSTs:1)
          • Rubrimonas cliftonensis (isolates:1; rSTs:1)
        • Ruixingdingia (isolates:1)
          • Ruixingdingia sedimenti (isolates:1)
        • Sedimentimonas (isolates:3; rSTs:3 tree)
          • Sedimentimonas flavescens (isolates:3; rSTs:3 tree)
        • Sedimentitalea (isolates:2; rSTs:1)
          • Sedimentitalea nanhaiensis (isolates:2; rSTs:1)
        • Silicimonas (isolates:2; rSTs:1)
          • Silicimonas algicola (isolates:2; rSTs:1)
        • Sinirhodobacter (isolates:8; rSTs:8 tree)
          • Sinirhodobacter ferrireducens (isolates:1; rSTs:1)
          • Sinirhodobacter hankyongi (isolates:1; rSTs:1)
          • Sinirhodobacter huangdaonensis (isolates:1; rSTs:1)
          • Sinirhodobacter populi (isolates:5; rSTs:5 tree)
        • Solirhodobacter (isolates:1; rSTs:1)
          • Solirhodobacter olei (isolates:1; rSTs:1)
        • Stagnihabitans (isolates:1; rSTs:1)
          • Stagnihabitans tardus (isolates:1; rSTs:1)
        • Szabonella (isolates:1; rSTs:1)
          • Szabonella alba (isolates:1; rSTs:1)
        • Tabrizicola (isolates:8; rSTs:8 tree)
          • Tabrizicola aquatica (isolates:1; rSTs:1)
          • Tabrizicola flagellatus (isolates:1; rSTs:1)
          • Tabrizicola oligotrophica (isolates:1; rSTs:1)
          • Tabrizicola piscis (isolates:1; rSTs:1)
          • Tabrizicola rongguiensis (isolates:1; rSTs:1)
          • Tabrizicola soli (isolates:1; rSTs:1)
          • Tabrizicola sp. (isolates:1; rSTs:1)
          • Tabrizicola thermarum (isolates:1; rSTs:1)
        • Thalassobium (isolates:1; rSTs:1)
          • Thalassobium sp. (isolates:1; rSTs:1)
        • Thalassorhabdomicrobium (isolates:2; rSTs:2)
          • Thalassorhabdomicrobium marinisediminis (isolates:2; rSTs:2)
        • Thermohalobaculum (isolates:1; rSTs:1)
          • Thermohalobaculum xanthum (isolates:1; rSTs:1)
        • Thioclava (isolates:27; rSTs:28 tree)
          • Thioclava atlantica (isolates:1; rSTs:1)
          • Thioclava dalianensis (isolates:2; rSTs:2)
          • Thioclava electrotropha (isolates:1; rSTs:1)
          • Thioclava indica (isolates:1; rSTs:1)
          • Thioclava marina (isolates:1; rSTs:1)
          • Thioclava nitratireducens (isolates:2; rSTs:2)
          • Thioclava pacifica (isolates:1; rSTs:1)
          • Thioclava sediminum (isolates:1; rSTs:1)
          • Thioclava sp. (isolates:17; rSTs:18 tree)
        • Tritonibacter (isolates:64; rSTs:18 tree)
          • Tritonibacter aquimaris (isolates:1; rSTs:1)
          • Tritonibacter horizontis (isolates:1; rSTs:1)
          • Tritonibacter litoralis (isolates:1; rSTs:1)
          • Tritonibacter mobilis (isolates:55; rSTs:12 tree)
          • Tritonibacter multivorans (isolates:3; rSTs:1)
          • Tritonibacter scottomollicae (isolates:2; rSTs:2)
          • Tritonibacter sp. (isolates:1)
        • Vannielia (isolates:5; rSTs:4 tree)
          • Vannielia litorea (isolates:5; rSTs:4 tree)
        • Xinfangfangia (isolates:1; rSTs:1 tree)
          • Xinfangfangia pollutisoli (isolates:1; rSTs:1)
        • Yoonia (isolates:25; rSTs:22 tree)
          • Yoonia litorea (isolates:1; rSTs:1)
          • Yoonia maricola (isolates:1; rSTs:1)
          • Yoonia maritima (isolates:2; rSTs:2)
          • Yoonia ponticola (isolates:1; rSTs:1)
          • Yoonia rosea (isolates:1; rSTs:1)
          • Yoonia sediminilitoris (isolates:2; rSTs:2)
          • Yoonia sp. (isolates:13; rSTs:11 tree)
          • Yoonia tamlensis (isolates:1; rSTs:1)
          • Yoonia vestfoldensis (isolates:3; rSTs:2)
      • Roseobacteraceae (isolates:1171; rSTs:855 tree)
        • Actibacterium (isolates:9; rSTs:8 tree)
          • Actibacterium atlanticum (isolates:1; rSTs:1)
          • Actibacterium lipolyticum (isolates:1; rSTs:1)
          • Actibacterium mucosum (isolates:1; rSTs:1)
          • Actibacterium naphthalenivorans (isolates:1; rSTs:1)
          • Actibacterium pelagium (isolates:2; rSTs:2)
          • Actibacterium sp. (isolates:2; rSTs:1)
          • Actibacterium ureilyticum (isolates:1; rSTs:1)
        • Aliiruegeria (isolates:3; rSTs:3 tree)
          • Aliiruegeria haliotis (isolates:1; rSTs:1)
          • Aliiruegeria lutimaris (isolates:1; rSTs:1)
          • Aliiruegeria sabulilitoris (isolates:1; rSTs:1)
        • Aliisedimentitalea (isolates:1)
          • Aliisedimentitalea sp. (isolates:1)
        • Alloyangia (isolates:3; rSTs:3 tree)
          • Alloyangia mangrovi (isolates:1; rSTs:2)
          • Alloyangia pacifica (isolates:2; rSTs:1)
        • Antarctobacter (isolates:2; rSTs:2)
          • Antarctobacter heliothermus (isolates:2; rSTs:2)
        • Celeribacter (isolates:24; rSTs:19 tree)
          • Celeribacter arenosi (isolates:1; rSTs:1)
          • Celeribacter baekdonensis (isolates:3; rSTs:3 tree)
          • Celeribacter ethanolicus (isolates:2; rSTs:2)
          • Celeribacter halophilus (isolates:8; rSTs:4 tree)
          • Celeribacter indicus (isolates:1; rSTs:1)
          • Celeribacter litoreus (isolates:1; rSTs:1)
          • Celeribacter marinus (isolates:3; rSTs:2)
          • Celeribacter naphthalenivorans (isolates:1; rSTs:1)
          • Celeribacter neptunius (isolates:1; rSTs:1)
          • Celeribacter persicus (isolates:1; rSTs:1)
          • Celeribacter sp. (isolates:2; rSTs:2)
        • Citreicella (isolates:1; rSTs:1)
          • Citreicella sp. (isolates:1; rSTs:1)
        • Citreimonas (isolates:1; rSTs:1)
          • Citreimonas salinaria (isolates:1; rSTs:1)
        • Dinoroseobacter (isolates:8; rSTs:3 tree)
          • Dinoroseobacter shibae (isolates:7; rSTs:2)
          • Dinoroseobacter sp. (isolates:1; rSTs:1)
        • Donghicola (isolates:5; rSTs:5 tree)
          • Donghicola eburneus (isolates:2; rSTs:2)
          • Donghicola mangrovi (isolates:2; rSTs:2)
          • Donghicola tyrosinivorans (isolates:1; rSTs:1)
        • Epibacterium (isolates:5; rSTs:4 tree)
          • Epibacterium ulvae (isolates:5; rSTs:4 tree)
        • Falsihalocynthiibacter (isolates:1; rSTs:1)
          • Falsihalocynthiibacter arcticus (isolates:1; rSTs:1)
        • Falsiruegeria (isolates:3; rSTs:3 tree)
          • Falsiruegeria litorea (isolates:1; rSTs:1)
          • Falsiruegeria mediterranea (isolates:2; rSTs:2)
        • Hasllibacter (isolates:1; rSTs:1)
          • Hasllibacter halocynthiae (isolates:1; rSTs:1)
        • Heliomarina (isolates:1; rSTs:1)
          • Heliomarina baculiformis (isolates:1; rSTs:1)
        • Jannaschia (isolates:21; rSTs:19 tree)
          • Jannaschia aquimarina (isolates:2; rSTs:1)
          • Jannaschia donghaensis (isolates:1; rSTs:1)
          • Jannaschia faecimaris (isolates:1; rSTs:1)
          • Jannaschia formosa (isolates:1; rSTs:1)
          • Jannaschia helgolandensis (isolates:1; rSTs:1)
          • Jannaschia marina (isolates:1; rSTs:1)
          • Jannaschia pagri (isolates:1; rSTs:1)
          • Jannaschia pohangensis (isolates:1; rSTs:1)
          • Jannaschia rubra (isolates:3; rSTs:2)
          • Jannaschia seohaensis (isolates:1; rSTs:1)
          • Jannaschia seosinensis (isolates:1; rSTs:1)
          • Jannaschia sp. (isolates:7; rSTs:7 tree)
        • Ketogulonicigenium (isolates:7; rSTs:4 tree)
          • Ketogulonicigenium robustum (isolates:1; rSTs:1)
          • Ketogulonicigenium vulgare (isolates:6; rSTs:3 tree)
        • Leisingera (isolates:40; rSTs:39 tree)
          • Leisingera aquaemixtae (isolates:7; rSTs:7 tree)
          • Leisingera aquimarina (isolates:1; rSTs:1)
          • Leisingera caerulea (isolates:6; rSTs:6 tree)
          • Leisingera daeponensis (isolates:1; rSTs:1)
          • Leisingera methylohalidivorans (isolates:1; rSTs:1)
          • Leisingera sp. (isolates:23; rSTs:22 tree)
          • Leisingera thetidis (isolates:1; rSTs:1)
        • Lentibacter (isolates:7; rSTs:7 tree)
          • Lentibacter algarum (isolates:6; rSTs:6 tree)
          • Lentibacter sp. (isolates:1; rSTs:1)
        • Litoreibacter (isolates:9; rSTs:9 tree)
          • Litoreibacter albidus (isolates:1; rSTs:1)
          • Litoreibacter arenae (isolates:1; rSTs:1)
          • Litoreibacter ascidiaceicola (isolates:1; rSTs:1)
          • Litoreibacter halocynthiae (isolates:2; rSTs:2)
          • Litoreibacter janthinus (isolates:1; rSTs:1)
          • Litoreibacter meonggei (isolates:1; rSTs:1)
          • Litoreibacter ponti (isolates:1; rSTs:1)
          • Litoreibacter roseus (isolates:1; rSTs:1)
        • Loktanella (isolates:10; rSTs:10 tree)
          • Loktanella atrilutea (isolates:1; rSTs:1)
          • Loktanella fryxellensis (isolates:1; rSTs:1)
          • Loktanella gaetbuli (isolates:1; rSTs:1)
          • Loktanella salsilacus (isolates:3; rSTs:3 tree)
          • Loktanella sp. (isolates:4; rSTs:4 tree)
        • Lutimaribacter (isolates:5; rSTs:3 tree)
          • Lutimaribacter pacificus (isolates:2; rSTs:1)
          • Lutimaribacter saemankumensis (isolates:1; rSTs:1)
          • Lutimaribacter sp. (isolates:2; rSTs:1)
        • Mameliella (isolates:22; rSTs:14 tree)
          • Mameliella alba (isolates:14; rSTs:8 tree)
          • Mameliella sediminis (isolates:1; rSTs:1)
          • Mameliella sp. (isolates:7; rSTs:5 tree)
        • Marinovum (isolates:7; rSTs:5 tree)
          • Marinovum algicola (isolates:3; rSTs:2)
          • Marinovum sp. (isolates:4; rSTs:3 tree)
        • Maritimibacter (isolates:9; rSTs:6 tree)
          • Maritimibacter alexandrii (isolates:1; rSTs:1)
          • Maritimibacter alkaliphilus (isolates:2; rSTs:1)
          • Maritimibacter dapengensis (isolates:1; rSTs:1)
          • Maritimibacter fusiformis (isolates:1; rSTs:1)
          • Maritimibacter harenae (isolates:1; rSTs:1)
          • Maritimibacter sp. (isolates:3; rSTs:1)
        • Marivita (isolates:36; rSTs:7 tree)
          • Marivita cryptomonadis (isolates:30; rSTs:2)
          • Marivita geojedonensis (isolates:2; rSTs:2)
          • Marivita hallyeonensis (isolates:1; rSTs:1)
          • Marivita lacus (isolates:1; rSTs:1)
          • Marivita sp. (isolates:2; rSTs:1)
        • Mesobacterium (isolates:2; rSTs:2)
          • Mesobacterium hydrothermale (isolates:1; rSTs:1)
          • Mesobacterium pallidum (isolates:1; rSTs:1)
        • Mesobaculum (isolates:1; rSTs:1)
          • Mesobaculum littorinae (isolates:1; rSTs:1)
        • Nereida (isolates:4; rSTs:3 tree)
          • Nereida ignava (isolates:3; rSTs:2)
          • Nereida sp. (isolates:1; rSTs:1)
        • Oceanicola (isolates:1; rSTs:1)
          • Oceanicola granulosus (isolates:1; rSTs:1)
        • Oceaniovalibus (isolates:1; rSTs:1)
          • Oceaniovalibus guishaninsula (isolates:1; rSTs:1)
        • Octadecabacter (isolates:9; rSTs:7 tree)
          • Octadecabacter algicola (isolates:1; rSTs:1)
          • Octadecabacter antarcticus (isolates:1; rSTs:1)
          • Octadecabacter arcticus (isolates:1; rSTs:1)
          • Octadecabacter ascidiaceicola (isolates:1; rSTs:1)
          • Octadecabacter dasysiphoniae (isolates:1; rSTs:1)
          • Octadecabacter sp. (isolates:2; rSTs:1)
          • Octadecabacter temperatus (isolates:2; rSTs:1)
        • Pacificibacter (isolates:7; rSTs:5 tree)
          • Pacificibacter marinus (isolates:4; rSTs:3 tree)
          • Pacificibacter maritimus (isolates:1; rSTs:1)
          • Pacificibacter sp. (isolates:2; rSTs:1)
        • Pacificoceanicola (isolates:1; rSTs:1)
          • Pacificoceanicola onchidii (isolates:1; rSTs:1)
        • Palleronia (isolates:12; rSTs:11 tree)
          • Palleronia abyssalis (isolates:1; rSTs:1)
          • Palleronia aestuarii (isolates:1; rSTs:1)
          • Palleronia caenipelagi (isolates:1; rSTs:1)
          • Palleronia marisminoris (isolates:2; rSTs:1)
          • Palleronia pelagia (isolates:1; rSTs:1)
          • Palleronia pontilimi (isolates:1; rSTs:1)
          • Palleronia rufa (isolates:1; rSTs:1)
          • Palleronia salina (isolates:1; rSTs:1)
          • Palleronia sediminis (isolates:1; rSTs:1)
          • Palleronia sp. (isolates:2; rSTs:2)
        • Pelagimonas (isolates:4; rSTs:2)
          • Pelagimonas phthalicica (isolates:2; rSTs:1)
          • Pelagimonas varians (isolates:2; rSTs:1)
        • Phaeobacter (isolates:77; rSTs:61 tree)
          • Phaeobacter gallaeciensis (isolates:7; rSTs:3 tree)
          • Phaeobacter inhibens (isolates:46; rSTs:38 tree)
          • Phaeobacter italicus (isolates:9; rSTs:8 tree)
          • Phaeobacter marinintestinus (isolates:1; rSTs:1)
          • Phaeobacter piscinae (isolates:8; rSTs:6 tree)
          • Phaeobacter porticola (isolates:1; rSTs:1)
          • Phaeobacter sp. (isolates:5; rSTs:4 tree)
        • Phycobacter (isolates:2; rSTs:2)
          • Phycobacter azelaicus (isolates:1; rSTs:1)
          • Phycobacter sp. (isolates:1; rSTs:1)
        • Pontibaca (isolates:2; rSTs:2)
          • Pontibaca methylaminivorans (isolates:1; rSTs:1)
          • Pontibaca salina (isolates:1; rSTs:1)
        • Ponticoccus (isolates:2; rSTs:1)
          • Ponticoccus alexandrii (isolates:1; rSTs:1)
          • Ponticoccus litoralis (isolates:1)
        • Poseidonocella (isolates:2; rSTs:2)
          • Poseidonocella pacifica (isolates:1; rSTs:1)
          • Poseidonocella sedimentorum (isolates:1; rSTs:1)
        • Primorskyibacter (isolates:4; rSTs:4 tree)
          • Primorskyibacter flagellatus (isolates:2; rSTs:2)
          • Primorskyibacter marinus (isolates:1; rSTs:1)
          • Primorskyibacter sedentarius (isolates:1; rSTs:1)
        • Profundibacterium (isolates:1; rSTs:1)
          • Profundibacterium mesophilum (isolates:1; rSTs:1)
        • Pseudoponticoccus (isolates:1; rSTs:1)
          • Pseudoponticoccus marisrubri (isolates:1; rSTs:1)
        • Pseudoruegeria (isolates:2; rSTs:2 tree)
          • Pseudoruegeria aquimaris (isolates:1; rSTs:1)
          • Pseudoruegeria sp. (isolates:1; rSTs:1)
        • Pseudosulfitobacter (isolates:121; rSTs:5 tree)
          • Pseudosulfitobacter koreensis (isolates:1)
          • Pseudosulfitobacter pseudonitzschiae (isolates:120; rSTs:5 tree)
        • Rhodoalgimonas (isolates:1; rSTs:1)
          • Rhodoalgimonas zhirmunskyi (isolates:1; rSTs:1)
        • Roseibacterium (isolates:5; rSTs:5 tree)
          • Roseibacterium beibuensis (isolates:1; rSTs:1)
          • Roseibacterium elongatum (isolates:1; rSTs:1)
          • Roseibacterium persicicum (isolates:1; rSTs:1)
          • Roseibacterium sp. (isolates:2; rSTs:2)
        • Roseicyclus (isolates:4; rSTs:3 tree)
          • Roseicyclus mahoneyensis (isolates:1; rSTs:1)
          • Roseicyclus marinus (isolates:3; rSTs:2)
        • Roseisalinus (isolates:1; rSTs:1)
          • Roseisalinus antarcticus (isolates:1; rSTs:1)
        • Roseivivax (isolates:14; rSTs:13 tree)
          • Roseivivax halodurans (isolates:1; rSTs:1)
          • Roseivivax halotolerans (isolates:1; rSTs:1)
          • Roseivivax isoporae (isolates:1; rSTs:1)
          • Roseivivax jejudonensis (isolates:1; rSTs:1)
          • Roseivivax lentus (isolates:1; rSTs:1)
          • Roseivivax marinus (isolates:4; rSTs:4 tree)
          • Roseivivax sediminis (isolates:1; rSTs:1)
          • Roseivivax sp. (isolates:4; rSTs:3 tree)
        • Roseobacter (isolates:14; rSTs:12 tree)
          • Roseobacter cerasinus (isolates:1; rSTs:1)
          • Roseobacter denitrificans (isolates:3; rSTs:1)
          • Roseobacter fucihabitans (isolates:1; rSTs:1)
          • Roseobacter insulae (isolates:1; rSTs:1)
          • Roseobacter litoralis (isolates:3; rSTs:3 tree)
          • Roseobacter ponti (isolates:1; rSTs:1)
          • Roseobacter sp. (isolates:4; rSTs:4 tree)
        • Roseovarius (isolates:79; rSTs:66 tree)
          • Roseovarius aestuarii (isolates:2; rSTs:1)
          • Roseovarius aestuariivivens (isolates:1; rSTs:1)
          • Roseovarius albus (isolates:1; rSTs:1)
          • Roseovarius amoyensis (isolates:1; rSTs:1)
          • Roseovarius arcticus (isolates:1; rSTs:1)
          • Roseovarius atlanticus (isolates:4; rSTs:2)
          • Roseovarius autotrophicus (isolates:1; rSTs:1)
          • Roseovarius azorensis (isolates:1; rSTs:1)
          • Roseovarius bejariae (isolates:1; rSTs:1)
          • Roseovarius carneus (isolates:1; rSTs:1)
          • Roseovarius confluentis (isolates:1; rSTs:1)
          • Roseovarius dicentrarchi (isolates:1; rSTs:1)
          • Roseovarius faecimaris (isolates:1; rSTs:1)
          • Roseovarius gaetbuli (isolates:1; rSTs:1)
          • Roseovarius gahaiensis (isolates:1; rSTs:1)
          • Roseovarius halotolerans (isolates:2; rSTs:1)
          • Roseovarius indicus (isolates:4; rSTs:2)
          • Roseovarius litoreus (isolates:1; rSTs:1)
          • Roseovarius litorisediminis (isolates:1; rSTs:1)
          • Roseovarius lutimaris (isolates:1; rSTs:1)
          • Roseovarius marisflavi (isolates:1; rSTs:1)
          • Roseovarius mucosus (isolates:3; rSTs:3 tree)
          • Roseovarius nanhaiticus (isolates:3; rSTs:2)
          • Roseovarius nitratireducens (isolates:1; rSTs:1)
          • Roseovarius nubinhibens (isolates:2; rSTs:2)
          • Roseovarius pacificus (isolates:2; rSTs:1)
          • Roseovarius pelagicus (isolates:1; rSTs:1)
          • Roseovarius salinarum (isolates:1; rSTs:1)
          • Roseovarius sp. (isolates:33; rSTs:29 tree)
          • Roseovarius spongiae (isolates:1; rSTs:1)
          • Roseovarius tolerans (isolates:3; rSTs:2)
        • Rubellimicrobium (isolates:8; rSTs:7 tree)
          • Rubellimicrobium aerolatum (isolates:1; rSTs:1)
          • Rubellimicrobium arenae (isolates:2; rSTs:1)
          • Rubellimicrobium mesophilum (isolates:1; rSTs:1)
          • Rubellimicrobium roseum (isolates:1; rSTs:1)
          • Rubellimicrobium rubrum (isolates:1; rSTs:1)
          • Rubellimicrobium sp. (isolates:1; rSTs:1)
          • Rubellimicrobium thermophilum (isolates:1; rSTs:1)
        • Ruegeria (isolates:146; rSTs:243 tree)
          • Ruegeria alba (isolates:1; rSTs:1)
          • Ruegeria aquimaris (isolates:1; rSTs:1)
          • Ruegeria arenilitoris (isolates:32; rSTs:30 tree)
          • Ruegeria atlantica (isolates:5; rSTs:5 tree)
          • Ruegeria conchae (isolates:9; rSTs:8 tree)
          • Ruegeria denitrificans (isolates:1; rSTs:1)
          • Ruegeria faecimaris (isolates:6; rSTs:6 tree)
          • Ruegeria haliotis (isolates:1; rSTs:1)
          • Ruegeria halocynthiae (isolates:1; rSTs:1)
          • Ruegeria intermedia (isolates:1; rSTs:1)
          • Ruegeria lacuscaerulensis (isolates:1; rSTs:1)
          • Ruegeria marina (isolates:1; rSTs:1)
          • Ruegeria marisflavi (isolates:1; rSTs:1)
          • Ruegeria marisrubri (isolates:1; rSTs:1)
          • Ruegeria meonggei (isolates:1; rSTs:1)
          • Ruegeria pomeroyi (isolates:2; rSTs:1 tree)
          • Ruegeria profundi (isolates:3; rSTs:2)
          • Ruegeria sediminis (isolates:1; rSTs:1)
          • Ruegeria sp. (isolates:76; rSTs:178 tree)
          • Ruegeria spongiae (isolates:1; rSTs:1)
        • Sagittula (isolates:8; rSTs:7 tree)
          • Sagittula marina (isolates:2; rSTs:1)
          • Sagittula salina (isolates:1; rSTs:1)
          • Sagittula sp. (isolates:3; rSTs:3 tree)
          • Sagittula stellata (isolates:2; rSTs:2)
        • Salibaculum (isolates:2; rSTs:2)
          • Salibaculum griseiflavum (isolates:1; rSTs:1)
          • Salibaculum halophilum (isolates:1; rSTs:1)
        • Salinihabitans (isolates:1; rSTs:1)
          • Salinihabitans flavidus (isolates:1; rSTs:1)
        • Salipiger (isolates:27; rSTs:22 tree)
          • Salipiger abyssi (isolates:2; rSTs:2)
          • Salipiger aestuarii (isolates:4; rSTs:3 tree)
          • Salipiger bermudensis (isolates:5; rSTs:5 tree)
          • Salipiger mangrovisoli (isolates:1; rSTs:1)
          • Salipiger marinus (isolates:3; rSTs:3 tree)
          • Salipiger mucosus (isolates:1; rSTs:1)
          • Salipiger pallidus (isolates:1; rSTs:1)
          • Salipiger pentaromativorans (isolates:1; rSTs:1)
          • Salipiger profundus (isolates:3; rSTs:1)
          • Salipiger sp. (isolates:2)
          • Salipiger thiooxidans (isolates:4; rSTs:4 tree)
        • Sediminimonas (isolates:1; rSTs:1)
          • Sediminimonas qiaohouensis (isolates:1; rSTs:1)
        • Seohaeicola (isolates:1; rSTs:1)
          • Seohaeicola zhoushanensis (isolates:1; rSTs:1)
        • Shimia (isolates:33; rSTs:32 tree)
          • Shimia abyssi (isolates:1; rSTs:1)
          • Shimia aestuarii (isolates:1; rSTs:1)
          • Shimia biformata (isolates:1; rSTs:1)
          • Shimia gijangensis (isolates:1; rSTs:1)
          • Shimia haliotis (isolates:1; rSTs:1)
          • Shimia isoporae (isolates:1; rSTs:1)
          • Shimia litoralis (isolates:1; rSTs:1)
          • Shimia marina (isolates:2; rSTs:2)
          • Shimia sagamensis (isolates:1; rSTs:1)
          • Shimia sediminis (isolates:1; rSTs:1)
          • Shimia sp. (isolates:11; rSTs:11 tree)
          • Shimia thalassica (isolates:11; rSTs:10 tree)
        • Sinisalibacter (isolates:2; rSTs:2)
          • Sinisalibacter aestuarii (isolates:1; rSTs:1)
          • Sinisalibacter lacisalsi (isolates:1; rSTs:1)
        • Sulfitobacter (isolates:282; rSTs:106 tree)
          • Sulfitobacter aestuariivivens (isolates:1; rSTs:1)
          • Sulfitobacter albidus (isolates:1; rSTs:1)
          • Sulfitobacter alexandrii (isolates:1; rSTs:1)
          • Sulfitobacter algicola (isolates:1; rSTs:1)
          • Sulfitobacter brevis (isolates:1; rSTs:1)
          • Sulfitobacter delicatus (isolates:1; rSTs:1)
          • Sulfitobacter donghicola (isolates:2; rSTs:1)
          • Sulfitobacter dubius (isolates:3; rSTs:3 tree)
          • Sulfitobacter faviae (isolates:4; rSTs:4 tree)
          • Sulfitobacter geojensis (isolates:36; rSTs:4 tree)
          • Sulfitobacter guttiformis (isolates:2; rSTs:1)
          • Sulfitobacter indolifex (isolates:2; rSTs:1)
          • Sulfitobacter litoralis (isolates:1; rSTs:1)
          • Sulfitobacter marinus (isolates:1; rSTs:1)
          • Sulfitobacter maritimus (isolates:1; rSTs:1)
          • Sulfitobacter mediterraneus (isolates:91; rSTs:8 tree)
          • Sulfitobacter noctilucae (isolates:1; rSTs:1)
          • Sulfitobacter noctilucicola (isolates:2; rSTs:1)
          • Sulfitobacter pacificus (isolates:2; rSTs:2)
          • Sulfitobacter pontiacus (isolates:25; rSTs:25 tree)
          • Sulfitobacter sabulilitoris (isolates:1; rSTs:1)
          • Sulfitobacter sediminilitoris (isolates:1; rSTs:1)
          • Sulfitobacter sp. (isolates:100; rSTs:43 tree)
          • Sulfitobacter undariae (isolates:1; rSTs:1)
        • Tateyamaria (isolates:6; rSTs:6 tree)
          • Tateyamaria omphalii (isolates:3; rSTs:3 tree)
          • Tateyamaria pelophila (isolates:1; rSTs:1)
          • Tateyamaria sp. (isolates:2; rSTs:2)
        • Thalassobacter (isolates:6; rSTs:4 tree)
          • Thalassobacter sp. (isolates:1)
          • Thalassobacter stenotrophicus (isolates:5; rSTs:4 tree)
        • Thalassococcus (isolates:2; rSTs:2)
          • Thalassococcus halodurans (isolates:1; rSTs:1)
          • Thalassococcus profundi (isolates:1; rSTs:1)
        • Thalassovita (isolates:13; rSTs:9 tree)
          • Thalassobius sp. Cn5-15 (isolates:1; rSTs:1)
          • Thalassobius vesicularis (isolates:1; rSTs:1)
          • Thalassovita aquimarina (isolates:1; rSTs:1)
          • Thalassovita autumnalis (isolates:2; rSTs:1)
          • Thalassovita gelatinovora (isolates:3; rSTs:1)
          • Thalassovita litoralis (isolates:1; rSTs:1)
          • Thalassovita mangrovi (isolates:1; rSTs:1)
          • Thalassovita mediterranea (isolates:2; rSTs:1)
          • Thalassovita taeanensis (isolates:1; rSTs:1)
        • Thetidibacter (isolates:1; rSTs:1)
          • Thetidibacter halocola (isolates:1; rSTs:1)
        • Thiosulfatihalobacter (isolates:2; rSTs:2)
          • Thiosulfatihalobacter marinus (isolates:2; rSTs:2)
        • Tranquillimonas (isolates:2; rSTs:2 tree)
          • Tranquillimonas alkanivorans (isolates:1; rSTs:1)
          • Tranquillimonas rosea (isolates:1; rSTs:1)
        • Tropicibacter (isolates:4; rSTs:3 tree)
          • Tropicibacter alexandrii (isolates:1; rSTs:1)
          • Tropicibacter naphthalenivorans (isolates:2; rSTs:1)
          • Tropicibacter oceani (isolates:1; rSTs:1)
        • Tropicimonas (isolates:5; rSTs:5 tree)
          • Tropicimonas isoalkanivorans (isolates:1; rSTs:1)
          • Tropicimonas marinistellae (isolates:1; rSTs:1)
          • Tropicimonas omnivorans (isolates:1; rSTs:1)
          • Tropicimonas sediminicola (isolates:1; rSTs:1)
          • Tropicimonas sp. (isolates:1; rSTs:1)
        • Wenxinia (isolates:4; rSTs:3 tree)
          • Wenxinia marina (isolates:3; rSTs:2)
          • Wenxinia saemankumensis (isolates:1; rSTs:1)
    • Rhodospirillales (isolates:314; rSTs:257 tree)
      • Azospirillaceae (isolates:121; rSTs:95 tree)
        • Arenibaculum (isolates:1; rSTs:1)
          • Arenibaculum pallidiluteum (isolates:1; rSTs:1)
        • Azospirillum (isolates:94; rSTs:68 tree)
          • Azospirillum aestuarii (isolates:1; rSTs:1)
          • Azospirillum agricola (isolates:2; rSTs:2)
          • Azospirillum argentinense (isolates:8; rSTs:8 tree)
          • Azospirillum baldaniorum (isolates:4; rSTs:2)
          • Azospirillum brasilense (isolates:21; rSTs:6 tree)
          • Azospirillum canadense (isolates:1; rSTs:1)
          • Azospirillum cavernae (isolates:1; rSTs:1)
          • Azospirillum doebereinerae (isolates:2; rSTs:2)
          • Azospirillum endophyticum (isolates:1; rSTs:1)
          • Azospirillum fermentarium (isolates:1; rSTs:1)
          • Azospirillum formosense (isolates:3; rSTs:2)
          • Azospirillum griseum (isolates:1; rSTs:1)
          • Azospirillum halopraeferens (isolates:2; rSTs:1)
          • Azospirillum humicireducens (isolates:1; rSTs:1)
          • Azospirillum isscasi (isolates:1)
          • Azospirillum lipoferum (isolates:2; rSTs:1)
          • Azospirillum melinis (isolates:2; rSTs:1)
          • Azospirillum oleiclasticum (isolates:2; rSTs:1)
          • Azospirillum oryzae (isolates:4; rSTs:2)
          • Azospirillum palustre (isolates:1; rSTs:1)
          • Azospirillum picis (isolates:2; rSTs:1)
          • Azospirillum ramasamyi (isolates:1; rSTs:1)
          • Azospirillum rugosum (isolates:2; rSTs:1)
          • Azospirillum soli (isolates:1; rSTs:1)
          • Azospirillum sp. (isolates:23; rSTs:25 tree)
          • Azospirillum tabaci (isolates:1; rSTs:1)
          • Azospirillum thermophilum (isolates:1; rSTs:1)
          • Azospirillum thiophilum (isolates:2; rSTs:1)
        • Indioceanicola (isolates:1; rSTs:1)
          • Indioceanicola profundi (isolates:1; rSTs:1)
        • Nitrospirillum (isolates:11; rSTs:13 tree)
          • Nitrospirillum amazonense (isolates:1; rSTs:1 tree)
          • Nitrospirillum iridis (isolates:1; rSTs:1)
          • Nitrospirillum sp. (isolates:4; rSTs:9 tree)
          • Nitrospirillum viridazoti (isolates:5; rSTs:2)
        • Niveispirillum (isolates:6; rSTs:5 tree)
          • Niveispirillum cyanobacteriorum (isolates:2; rSTs:1)
          • Niveispirillum irakense (isolates:1; rSTs:1)
          • Niveispirillum lacus (isolates:1; rSTs:1)
          • Niveispirillum sp. (isolates:2; rSTs:2)
        • Oleisolibacter (isolates:1; rSTs:1)
          • Oleisolibacter albus (isolates:1; rSTs:1)
        • Skermanella (isolates:7; rSTs:6 tree)
          • Skermanella aerolata (isolates:2; rSTs:1)
          • Skermanella mucosa (isolates:1; rSTs:1)
          • Skermanella pratensis (isolates:1; rSTs:1)
          • Skermanella rosea (isolates:1; rSTs:1)
          • Skermanella sp. (isolates:1; rSTs:1)
          • Skermanella stibiiresistens (isolates:1; rSTs:1)
      • Dongiaceae (isolates:8; rSTs:6 tree)
        • Aliidongia (isolates:1; rSTs:1)
          • Aliidongia dinghuensis (isolates:1; rSTs:1)
        • Dongia (isolates:5; rSTs:3 tree)
          • Dongia deserti (isolates:1; rSTs:1)
          • Dongia mobilis (isolates:1; rSTs:1)
          • Dongia rigui (isolates:1)
          • Dongia soli (isolates:1)
          • Dongia sp. (isolates:1; rSTs:1)
        • Hypericibacter (isolates:2; rSTs:2)
          • Hypericibacter adhaerens (isolates:1; rSTs:1)
          • Hypericibacter terrae (isolates:1; rSTs:1)
      • Kiloniellaceae (isolates:10; rSTs:10 tree)
        • Aestuariispira (isolates:2; rSTs:2)
          • Aestuariispira ectoiniformans (isolates:1; rSTs:1)
          • Aestuariispira insulae (isolates:1; rSTs:1)
        • Curvivirga (isolates:1; rSTs:1)
          • Curvivirga aplysinae (isolates:1; rSTs:1)
        • Kiloniella (isolates:7; rSTs:7 tree)
          • Kiloniella laminariae (isolates:1; rSTs:1)
          • Kiloniella litopenaei (isolates:1; rSTs:1)
          • Kiloniella majae (isolates:3; rSTs:3 tree)
          • Kiloniella sp. (isolates:1; rSTs:1)
          • Kiloniella spongiae (isolates:1; rSTs:1)
      • Magnetospirillaceae (isolates:5; rSTs:5 tree)
        • Paramagnetospirillum (isolates:5; rSTs:5 tree)
          • Paramagnetospirillum caucaseum (isolates:1; rSTs:1)
          • Paramagnetospirillum kuznetsovii (isolates:1; rSTs:1)
          • Paramagnetospirillum magneticum (isolates:1; rSTs:1)
          • Paramagnetospirillum magnetotacticum (isolates:1; rSTs:1)
          • Paramagnetospirillum marisnigri (isolates:1; rSTs:1)
      • Magnetovibrionaceae (isolates:4; rSTs:3 tree)
        • Magnetovibrio (isolates:2; rSTs:2)
          • Magnetovibrio blakemorei (isolates:1; rSTs:1)
          • Magnetovibrio sp. (isolates:1; rSTs:1)
        • Varunaivibrio (isolates:2; rSTs:1)
          • Varunaivibrio sulfuroxidans (isolates:2; rSTs:1)
      • Novispirillaceae (isolates:21; rSTs:13 tree)
        • Caenispirillum (isolates:3; rSTs:3 tree)
          • Caenispirillum bisanense (isolates:2; rSTs:2)
          • Caenispirillum salinarum (isolates:1; rSTs:1)
        • Haematospirillum (isolates:15; rSTs:7 tree)
          • Haematospirillum jordaniae (isolates:11; rSTs:4 tree)
          • Haematospirillum sp. (isolates:4; rSTs:3 tree)
        • Insolitispirillum (isolates:1; rSTs:1)
          • Insolitispirillum peregrinum (isolates:1; rSTs:1)
        • Novispirillum (isolates:2; rSTs:2)
          • Novispirillum itersonii (isolates:2; rSTs:2)
      • Oceanibaculaceae (isolates:4; rSTs:4 tree)
        • Oceanibaculum (isolates:4; rSTs:4 tree)
          • Oceanibaculum indicum (isolates:2; rSTs:2)
          • Oceanibaculum nanhaiense (isolates:1; rSTs:1)
          • Oceanibaculum pacificum (isolates:1; rSTs:1)
      • Oleispirillaceae (isolates:1)
        • Oleispirillum (isolates:1)
          • Oleispirillum naphthae (isolates:1)
      • Rhodospirillaceae (isolates:50; rSTs:40 tree)
        • Aerophototrophica (isolates:1; rSTs:1)
          • Aerophototrophica crusticola (isolates:1; rSTs:1)
        • Algihabitans (isolates:1; rSTs:1)
          • Algihabitans albus (isolates:1; rSTs:1)
        • Candidatus Endolissoclinum (isolates:2; rSTs:2)
          • Candidatus Endolissoclinum faulkneri (isolates:2; rSTs:2)
        • Defluviicoccus (isolates:1)
          • Defluviicoccus vanus (isolates:1)
        • Denitrobaculum (isolates:1; rSTs:1)
          • Denitrobaculum tricleocarpae (isolates:1; rSTs:1)
        • Elstera (isolates:3; rSTs:1)
          • Elstera cyanobacteriorum (isolates:2; rSTs:1)
          • Elstera litoralis (isolates:1)
        • Ferrovibrio (isolates:2; rSTs:2)
          • Ferrovibrio sp. (isolates:1; rSTs:1)
          • Ferrovibrio terrae (isolates:1; rSTs:1)
        • Ferruginivarius (isolates:1; rSTs:1)
          • Ferruginivarius sediminum (isolates:1; rSTs:1)
        • Hwanghaeella (isolates:1; rSTs:1)
          • Hwanghaeella grinnelliae (isolates:1; rSTs:1)
        • Inquilinus (isolates:6; rSTs:5 tree)
          • Inquilinus ginsengisoli (isolates:1; rSTs:1)
          • Inquilinus limosus (isolates:3; rSTs:3 tree)
          • Inquilinus sp. (isolates:2; rSTs:1)
        • Magnetospirillum (isolates:11; rSTs:11 tree)
          • Magnetospirillum aberrantis (isolates:1; rSTs:1)
          • Magnetospirillum fulvum (isolates:2; rSTs:2)
          • Magnetospirillum gryphiswaldense (isolates:3; rSTs:3 tree)
          • Magnetospirillum molischianum (isolates:1; rSTs:1)
          • Magnetospirillum moscoviense (isolates:1; rSTs:1)
          • Magnetospirillum sp. (isolates:2; rSTs:2 tree)
          • Magnetospirillum sulfuroxidans (isolates:1; rSTs:1)
        • Marivibrio (isolates:1; rSTs:1)
          • Marivibrio halodurans (isolates:1; rSTs:1)
        • Pacificispira (isolates:1; rSTs:1)
          • Pacificispira spongiicola (isolates:1; rSTs:1)
        • Pararhodospirillum (isolates:2; rSTs:2)
          • Pararhodospirillum oryzae (isolates:1; rSTs:1)
          • Pararhodospirillum photometricum (isolates:1; rSTs:1)
        • Phaeovibrio (isolates:1)
          • Phaeovibrio sulfidiphilus (isolates:1)
        • Rhodospira (isolates:1; rSTs:1)
          • Rhodospira trueperi (isolates:1; rSTs:1)
        • Rhodospirillum (isolates:6; rSTs:4 tree)
          • Rhodospirillum centenum (isolates:2; rSTs:2)
          • Rhodospirillum rubrum (isolates:4; rSTs:2)
        • Roseospira (isolates:6; rSTs:3 tree)
          • Roseospira goensis (isolates:1; rSTs:1)
          • Roseospira marina (isolates:3; rSTs:1)
          • Roseospira navarrensis (isolates:1; rSTs:1)
          • Roseospira visakhapatnamensis (isolates:1)
        • Roseospirillum (isolates:1; rSTs:1)
          • Roseospirillum parvum (isolates:1; rSTs:1)
        • Telmatospirillum (isolates:1; rSTs:1)
          • Telmatospirillum siberiense (isolates:1; rSTs:1)
      • Rhodovibrionaceae (isolates:15; rSTs:12 tree)
        • Aquibaculum (isolates:1; rSTs:1)
          • Aquibaculum arenosum (isolates:1; rSTs:1)
        • Fodinicurvata (isolates:2; rSTs:2)
          • Fodinicurvata fenggangensis (isolates:1; rSTs:1)
          • Fodinicurvata sediminis (isolates:1; rSTs:1)
        • Limibacillus (isolates:2; rSTs:2)
          • Limibacillus halophilus (isolates:1; rSTs:1)
          • Limibacillus sp. (isolates:1; rSTs:1)
        • Limimonas (isolates:1; rSTs:1)
          • Limimonas halophila (isolates:1; rSTs:1)
        • Pelagibius (isolates:4; rSTs:3 tree)
          • Pelagibius litoralis (isolates:1; rSTs:1)
          • Pelagibius marinus (isolates:1; rSTs:1)
          • Pelagibius sp. (isolates:2; rSTs:1)
        • Rhodovibrio (isolates:3; rSTs:2)
          • Rhodovibrio salinarum (isolates:2; rSTs:1)
          • Rhodovibrio sodomensis (isolates:1; rSTs:1)
        • Tistlia (isolates:2; rSTs:1)
          • Tistlia consotensis (isolates:2; rSTs:1)
      • Shumkoniaceae (isolates:1; rSTs:1)
        • Shumkonia (isolates:1; rSTs:1)
          • Shumkonia mesophila (isolates:1; rSTs:1)
      • Stellaceae (isolates:5; rSTs:4 tree)
        • Constrictibacter (isolates:1; rSTs:1)
          • Constrictibacter sp. (isolates:1; rSTs:1)
        • Stella (isolates:4; rSTs:3 tree)
          • Stella humosa (isolates:2; rSTs:1)
          • Stella sp. (isolates:1; rSTs:1)
          • Stella vacuolata (isolates:1; rSTs:1)
      • Terasakiellaceae (isolates:5; rSTs:5 tree)
        • Terasakiella (isolates:5; rSTs:5 tree)
          • Candidatus Terasakiella magnetica (isolates:1; rSTs:1)
          • Terasakiella brassicae (isolates:1; rSTs:1)
          • Terasakiella pusilla (isolates:1; rSTs:1)
          • Terasakiella sp. (isolates:2; rSTs:2)
      • Thalassobaculaceae (isolates:9; rSTs:8 tree)
        • Nisaea (isolates:4; rSTs:4 tree)
          • Nisaea acidiphila (isolates:1; rSTs:1)
          • Nisaea denitrificans (isolates:1; rSTs:1)
          • Nisaea nitritireducens (isolates:1; rSTs:1)
          • Nisaea sediminum (isolates:1; rSTs:1)
        • Thalassobaculum (isolates:5; rSTs:4 tree)
          • Thalassobaculum fulvum (isolates:1; rSTs:1)
          • Thalassobaculum litoreum (isolates:1; rSTs:1)
          • Thalassobaculum salexigens (isolates:2; rSTs:1)
          • Thalassobaculum sp. (isolates:1; rSTs:1)
      • Thalassospiraceae (isolates:51; rSTs:48 tree)
        • Magnetospira (isolates:1; rSTs:1)
          • Magnetospira sp. (isolates:1; rSTs:1)
        • Thalassospira (isolates:50; rSTs:47 tree)
          • Thalassospira alkalitolerans (isolates:1; rSTs:1)
          • Thalassospira aquimaris (isolates:1; rSTs:1)
          • Thalassospira australica (isolates:1; rSTs:1)
          • Thalassospira indica (isolates:1; rSTs:1)
          • Thalassospira lohafexi (isolates:1; rSTs:1)
          • Thalassospira lucentensis (isolates:2; rSTs:1)
          • Thalassospira marina (isolates:2; rSTs:2)
          • Thalassospira mesophila (isolates:1; rSTs:1)
          • Thalassospira permensis (isolates:2; rSTs:2)
          • Thalassospira povalilytica (isolates:3; rSTs:3 tree)
          • Thalassospira profundimaris (isolates:1; rSTs:1)
          • Thalassospira sp. (isolates:25; rSTs:25 tree)
          • Thalassospira tepidiphila (isolates:6; rSTs:4 tree)
          • Thalassospira xiamenensis (isolates:2; rSTs:2)
          • Thalassospira xianhensis (isolates:1; rSTs:1)
      • Zavarziniaceae (isolates:4; rSTs:3 tree)
        • Zavarzinia (isolates:4; rSTs:3 tree)
          • Zavarzinia aquatilis (isolates:1; rSTs:1)
          • Zavarzinia compransoris (isolates:2; rSTs:1)
          • Zavarzinia marina (isolates:1; rSTs:1)
    • Rhodothalassiales (isolates:5; rSTs:3 tree)
      • Rhodothalassiaceae (isolates:5; rSTs:3 tree)
        • Rhodothalassium (isolates:5; rSTs:3 tree)
          • Rhodothalassium salexigens (isolates:5; rSTs:3 tree)
    • Rickettsiales (isolates:419; rSTs:260 tree)
      • Anaplasmataceae (isolates:199; rSTs:135 tree)
        • Anaplasma (isolates:39; rSTs:23 tree)
          • Anaplasma capra (isolates:2; rSTs:2)
          • Anaplasma centrale (isolates:1; rSTs:1)
          • Anaplasma marginale (isolates:3; rSTs:2)
          • Anaplasma ovis (isolates:1; rSTs:1)
          • Anaplasma phagocytophilum (isolates:31; rSTs:16 tree)
          • Anaplasma platys (isolates:1; rSTs:1)
        • Candidatus Mesenet (isolates:2)
          • Candidatus Mesenet endosymbiont of Agriotes lineatus (isolates:1)
          • Candidatus Mesenet endosymbiont of Phosphuga atrata (isolates:1)
        • Candidatus Neoehrlichia (isolates:6; rSTs:4 tree)
          • Candidatus Neoehrlichia lotoris (isolates:1; rSTs:1)
          • Neoehrlichia mikurensis (isolates:5; rSTs:3 tree)
        • Candidatus Xenohaliotis (isolates:1)
          • Candidatus Xenohaliotis californiensis (isolates:1)
        • Candidatus Xenolissoclinum (isolates:1)
          • Candidatus Xenolissoclinum pacificiensis (isolates:1)
        • Ehrlichia (isolates:45; rSTs:32 tree)
          • Ehrlichia canis (isolates:5; rSTs:3 tree)
          • Ehrlichia chaffeensis (isolates:9; rSTs:8 tree)
          • Ehrlichia japonica (isolates:1; rSTs:1)
          • Ehrlichia minasensis (isolates:1; rSTs:1)
          • Ehrlichia muris (isolates:2; rSTs:2)
          • Ehrlichia ruminantium (isolates:26; rSTs:17 tree)
          • Ehrlichia sp. (isolates:1)
        • Neorickettsia (isolates:5; rSTs:5 tree)
          • Neorickettsia findlayensis (isolates:1; rSTs:1)
          • Neorickettsia helminthoeca (isolates:1; rSTs:1)
          • Neorickettsia risticii (isolates:1; rSTs:1)
          • Neorickettsia sennetsu (isolates:1; rSTs:1)
          • Neorickettsia sp. (isolates:1; rSTs:1)
        • Wolbachia (isolates:100; rSTs:71 tree)
          • Candidatus Wolbachia massiliensis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Aedes albopictus (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Anopheles demeilloni (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Armadillidium vulgare (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Atemnus politus (isolates:2)
          • Wolbachia endosymbiont of Bemisia tabaci (isolates:1)
          • Wolbachia endosymbiont of Brugia malayi (isolates:2; rSTs:1)
          • Wolbachia endosymbiont of Brugia pahangi (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Cardiocondyla obscurior (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Carposina sasakii (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Ceratitis capitata (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Ceratosolen solmsi (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Chrysomya megacephala (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Cimex lectularius (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Corcyra cephalonica (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Cruorifilaria tuberocauda (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Ctenocephalides felis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Culex molestus (isolates:1)
          • Wolbachia endosymbiont of Culex quinquefasciatus (isolates:2; rSTs:1)
          • Wolbachia endosymbiont of Cylisticus convexus (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Dactylopius coccus (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Delia radicum (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Diaphorina citri (isolates:8; rSTs:1)
          • Wolbachia endosymbiont of Dipetalonema caudispina (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Drosophila ananassae (isolates:1)
          • Wolbachia endosymbiont of Drosophila auraria (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Drosophila incompta (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Drosophila innubila (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Drosophila mauritiana (isolates:3; rSTs:1)
          • Wolbachia endosymbiont of Drosophila melanogaster (isolates:13; rSTs:1)
          • Wolbachia endosymbiont of Drosophila santomea (isolates:2)
          • Wolbachia endosymbiont of Drosophila sechellia (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Drosophila simulans (isolates:4; rSTs:1)
          • Wolbachia endosymbiont of Drosophila subpulchrella (isolates:1)
          • Wolbachia endosymbiont of Drosophila willistoni (isolates:1)
          • Wolbachia endosymbiont of Erebia cassioides (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Folsomia candida (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Glossina morsitans morsitans (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Laodelphax striatellus (isolates:2; rSTs:2)
          • Wolbachia endosymbiont of Leptopilina clavipes (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Listronotus oregonensis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Litomosoides brasiliensis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Litomosoides sigmodontis (isolates:2; rSTs:1)
          • Wolbachia endosymbiont of Madathamugadia hiepei (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Mansonella ozzardi (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Mansonella perstans (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Muscidifurax uniraptor (isolates:1)
          • Wolbachia endosymbiont of Nasonia oneida (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nasonia vitripennis (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nilaparvata lugens (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nomada ferruginata (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nomada flava (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nomada leucophthalma (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Nomada panzeri (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Onchocerca ochengi (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Onchocerca volvulus (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Operophtera brumata (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Pentalonia nigronervosa (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Rhagoletis cerasi (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Spodoptera picta (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Tribolium confusum (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Trichogramma pretiosum (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Wiebesia pumilae (isolates:1; rSTs:1)
          • Wolbachia endosymbiont of Wuchereria bancrofti (isolates:1)
          • Wolbachia pipientis (isolates:1; rSTs:1)
          • Wolbachia sp. (isolates:4; rSTs:13 tree)
      • Candidatus Deianiraeaceae (isolates:1)
        • Candidatus Deianiraea (isolates:1)
          • Candidatus Deianiraea vastatrix (isolates:1)
      • Candidatus Midichloriaceae (isolates:10; rSTs:3 tree)
        • Candidatus Anadelfobacter (isolates:1)
          • Candidatus Anadelfobacter sociabilis (isolates:1)
        • Candidatus Aquarickettsia (isolates:1; rSTs:1)
          • Candidatus Aquarickettsia rohweri (isolates:1; rSTs:1)
        • Candidatus Bandiella (isolates:2)
          • Candidatus Bandiella numerosa (isolates:2)
        • Candidatus Fokinia (isolates:2; rSTs:1)
          • Candidatus Fokinia cryptica (isolates:1)
          • Candidatus Fokinia solitaria (isolates:1; rSTs:1)
        • Candidatus Jidaibacter (isolates:1; rSTs:1)
          • Candidatus Jidaibacter acanthamoeba (isolates:1; rSTs:1)
        • Candidatus Lariskella (isolates:2)
          • Candidatus Lariskella endosymbiont of Epinotia ramella (isolates:1)
          • Candidatus Lariskella endosymbiont of Hedychridium roseum (isolates:1)
        • Candidatus Midichloria (isolates:1)
          • Candidatus Midichloria mitochondrii (isolates:1)
      • Rickettsiaceae (isolates:205; rSTs:120 tree)
        • Candidatus Megaera (isolates:2; rSTs:2)
          • Candidatus Megaera polyxenophila (isolates:2; rSTs:2)
        • Candidatus Phycorickettsia (isolates:1; rSTs:1)
          • Candidatus Phycorickettsia trachydisci (isolates:1; rSTs:1)
        • Candidatus Sarmatiella (isolates:1)
          • Candidatus Sarmatiella mevalonica (isolates:1)
        • Candidatus Sneabacter (isolates:1)
          • Candidatus Sneabacter namystus (isolates:1)
        • Candidatus Tisiphia (isolates:16; rSTs:14 tree)
          • Candidatus Tisiphia endosymbiont of Beris chalybata (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Dascillus cervinus (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Dioctria linearis (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Dioctria rufipes (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Ditula angustiorana (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Empis tessellata (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Melanophora roralis (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Metellina segmentata (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Myopa tessellatipennis (isolates:1)
          • Candidatus Tisiphia endosymbiont of Nedyus quadrimaculatus (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Nemotelus nigrinus (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Parasteatoda lunata (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Piscicola geometra (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Ptychoptera albimana (isolates:1; rSTs:1)
          • Candidatus Tisiphia endosymbiont of Sialis lutaria (isolates:1)
          • Candidatus Tisiphia endosymbiont of Thecophora atra (isolates:1; rSTs:1)
        • Orientia (isolates:23; rSTs:16 tree)
          • Candidatus Orientia mediorientalis (isolates:1; rSTs:1)
          • Orientia tsutsugamushi (isolates:22; rSTs:15 tree)
        • Rickettsia (isolates:161; rSTs:87 tree)
          • Candidatus Rickettsia colombianensi (isolates:1)
          • Rickettsia aeschlimannii (isolates:1; rSTs:1)
          • Rickettsia africae (isolates:1; rSTs:1)
          • Rickettsia akari (isolates:1; rSTs:1)
          • Rickettsia amblyommatis (isolates:5; rSTs:3 tree)
          • Rickettsia argasii (isolates:1; rSTs:1)
          • Rickettsia asembonensis (isolates:1; rSTs:1)
          • Rickettsia asiatica (isolates:1; rSTs:1)
          • Rickettsia australis (isolates:2; rSTs:1)
          • Rickettsia bellii (isolates:4; rSTs:3 tree)
          • Rickettsia canadensis (isolates:2; rSTs:2)
          • Rickettsia conorii (isolates:14; rSTs:9 tree)
          • Rickettsia endosymbiont of Aspidapion aeneum (isolates:1)
          • Rickettsia endosymbiont of Cantharis rufa (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Cardiosporidium cionae (isolates:1)
          • Rickettsia endosymbiont of Ceutorhynchus obstrictus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Culicoides newsteadi (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Gonocerus acuteangulatus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Ixodes pacificus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Ixodes scapularis (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Lasioglossum villosulum (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Oedothorax gibbosus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Orchestes rusci (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Polydrusus tereticollis (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Proechinophthirus fluctus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Rhinocyllus conicus (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Seladonia tumulorum (isolates:1; rSTs:1)
          • Rickettsia endosymbiont of Urophora cardui (isolates:1; rSTs:1)
          • Rickettsia felis (isolates:3; rSTs:2)
          • Rickettsia fournieri (isolates:1; rSTs:1)
          • Rickettsia gravesii (isolates:1; rSTs:1)
          • Rickettsia helvetica (isolates:3; rSTs:2)
          • Rickettsia honei (isolates:1; rSTs:1)
          • Rickettsia hoogstraalii (isolates:3; rSTs:3 tree)
          • Rickettsia japonica (isolates:35; rSTs:2)
          • Rickettsia massiliae (isolates:2; rSTs:2)
          • Rickettsia monacensis (isolates:1; rSTs:1)
          • Rickettsia montanensis (isolates:1; rSTs:1)
          • Rickettsia parkeri (isolates:6; rSTs:4 tree)
          • Rickettsia peacockii (isolates:1; rSTs:1)
          • Rickettsia philipii (isolates:1; rSTs:1)
          • Rickettsia prowazekii (isolates:13; rSTs:6 tree)
          • Rickettsia rhipicephali (isolates:3; rSTs:3 tree)
          • Rickettsia rickettsii (isolates:17; rSTs:5 tree)
          • Rickettsia sibirica (isolates:3; rSTs:3 tree)
          • Rickettsia slovaca (isolates:2; rSTs:2)
          • Rickettsia sp. (isolates:5; rSTs:3 tree)
          • Rickettsia sp. MEAM1 (Bemisia tabaci) (isolates:2; rSTs:1)
          • Rickettsia tamurae (isolates:2; rSTs:2)
          • Rickettsia tillamookensis (isolates:1; rSTs:1)
          • Rickettsia typhi (isolates:4; rSTs:1)
    • Sneathiellales (isolates:13; rSTs:11 tree)
      • Sneathiellaceae (isolates:13; rSTs:11 tree)
        • Oceanibacterium (isolates:1; rSTs:1)
          • Oceanibacterium hippocampi (isolates:1; rSTs:1)
        • Sneathiella (isolates:12; rSTs:10 tree)
          • Sneathiella aquimaris (isolates:2; rSTs:1)
          • Sneathiella chinensis (isolates:2; rSTs:1)
          • Sneathiella chungangensis (isolates:2; rSTs:1)
          • Sneathiella glossodoripedis (isolates:1; rSTs:1)
          • Sneathiella limimaris (isolates:1; rSTs:1)
          • Sneathiella litorea (isolates:1; rSTs:1)
          • Sneathiella marina (isolates:1; rSTs:1)
          • Sneathiella sedimenti (isolates:1; rSTs:1)
          • Sneathiella sp. (isolates:1; rSTs:2)
    • Sphingomonadales (isolates:1460; rSTs:1107 tree)
      • Erythrobacteraceae (isolates:217; rSTs:189 tree)
        • Actirhodobacter (isolates:1; rSTs:1)
          • Actirhodobacter atriluteus (isolates:1; rSTs:1)
        • Allopontixanthobacter (isolates:2; rSTs:2)
          • Allopontixanthobacter confluentis (isolates:1; rSTs:1)
          • Allopontixanthobacter sediminis (isolates:1; rSTs:1)
        • Alteraurantiacibacter (isolates:4; rSTs:3 tree)
          • Alteraurantiacibacter aestuarii (isolates:2; rSTs:1)
          • Alteraurantiacibacter aquimixticola (isolates:1; rSTs:1)
          • Alteraurantiacibacter buctensis (isolates:1; rSTs:1)
        • Altererythrobacter (isolates:10; rSTs:9 tree)
          • Altererythrobacter epoxidivorans (isolates:1; rSTs:1)
          • Altererythrobacter ishigakiensis (isolates:2; rSTs:1)
          • Altererythrobacter litoralis (isolates:1; rSTs:1)
          • Altererythrobacter lutimaris (isolates:1; rSTs:1)
          • Altererythrobacter rubellus (isolates:1; rSTs:1)
          • Altererythrobacter segetis (isolates:1; rSTs:1)
          • Altererythrobacter sp. (isolates:2; rSTs:2)
          • Altererythrobacter xiamenensis (isolates:1; rSTs:1)
        • Altericroceibacterium (isolates:4; rSTs:4 tree)
          • Altericroceibacterium endophyticum (isolates:1; rSTs:1)
          • Altericroceibacterium indicum (isolates:1; rSTs:1)
          • Altericroceibacterium spongiae (isolates:1; rSTs:1)
          • Altericroceibacterium xinjiangense (isolates:1; rSTs:1)
        • Alteripontixanthobacter (isolates:2; rSTs:2)
          • Alteripontixanthobacter maritimus (isolates:1; rSTs:1)
          • Alteripontixanthobacter muriae (isolates:1; rSTs:1)
        • Alteriqipengyuania (isolates:3; rSTs:2 tree)
          • Alteriqipengyuania halimionae (isolates:1; rSTs:1)
          • Alteriqipengyuania lutimaris (isolates:2; rSTs:1)
        • Aurantiacibacter (isolates:25; rSTs:19 tree)
          • Aurantiacibacter aquimixticola (isolates:1; rSTs:1)
          • Aurantiacibacter arachoides (isolates:2; rSTs:1)
          • Aurantiacibacter atlanticus (isolates:1; rSTs:1)
          • Aurantiacibacter gangjinensis (isolates:2; rSTs:1)
          • Aurantiacibacter luteus (isolates:1; rSTs:1)
          • Aurantiacibacter marinus (isolates:2; rSTs:1)
          • Aurantiacibacter odishensis (isolates:1; rSTs:1)
          • Aurantiacibacter rhizosphaerae (isolates:1; rSTs:1)
          • Aurantiacibacter sediminis (isolates:2; rSTs:1)
          • Aurantiacibacter sp. (isolates:7; rSTs:6 tree)
          • Aurantiacibacter spongiae (isolates:1; rSTs:1)
          • Aurantiacibacter suaedae (isolates:1; rSTs:1)
          • Aurantiacibacter xanthus (isolates:1; rSTs:1)
          • Aurantiacibacter zhengii (isolates:2; rSTs:1)
        • Caenibius (isolates:3; rSTs:2)
          • Caenibius sp. (isolates:1; rSTs:1)
          • Caenibius tardaugens (isolates:2; rSTs:1)
        • Croceibacterium (isolates:10; rSTs:9 tree)
          • Croceibacterium aestuarii (isolates:1; rSTs:1)
          • Croceibacterium atlanticum (isolates:2; rSTs:1)
          • Croceibacterium ferulae (isolates:1; rSTs:1)
          • Croceibacterium mercuriale (isolates:1; rSTs:1)
          • Croceibacterium salegens (isolates:1; rSTs:1)
          • Croceibacterium selenioxidans (isolates:1; rSTs:1)
          • Croceibacterium soli (isolates:1; rSTs:1)
          • Croceibacterium sp. (isolates:1; rSTs:1)
          • Croceibacterium xixiisoli (isolates:1; rSTs:1)
        • Croceicoccus (isolates:19; rSTs:16 tree)
          • Croceicoccus bisphenolivorans (isolates:1; rSTs:1)
          • Croceicoccus esteveae (isolates:1; rSTs:1)
          • Croceicoccus estronivorus (isolates:1; rSTs:1)
          • Croceicoccus gelatinilyticus (isolates:1; rSTs:1)
          • Croceicoccus hydrothermalis (isolates:1; rSTs:1)
          • Croceicoccus marinus (isolates:2; rSTs:2)
          • Croceicoccus mobilis (isolates:2; rSTs:1)
          • Croceicoccus naphthovorans (isolates:2; rSTs:1)
          • Croceicoccus pelagius (isolates:2; rSTs:1)
          • Croceicoccus ponticola (isolates:1; rSTs:1)
          • Croceicoccus sediminis (isolates:1; rSTs:1)
          • Croceicoccus sp. (isolates:4; rSTs:4 tree)
        • Erythrobacter (isolates:36; rSTs:30 tree)
          • Erythrobacter ani (isolates:1; rSTs:1)
          • Erythrobacter aurantius (isolates:1; rSTs:1)
          • Erythrobacter aureus (isolates:1; rSTs:1)
          • Erythrobacter colymbi (isolates:1; rSTs:1)
          • Erythrobacter cryptus (isolates:1; rSTs:1)
          • Erythrobacter dokdonensis (isolates:2; rSTs:1)
          • Erythrobacter donghaensis (isolates:1; rSTs:1)
          • Erythrobacter fulvus (isolates:1; rSTs:1)
          • Erythrobacter insulae (isolates:1; rSTs:1)
          • Erythrobacter litoralis (isolates:2; rSTs:1)
          • Erythrobacter longus (isolates:1; rSTs:1)
          • Erythrobacter mangrovi (isolates:1; rSTs:1)
          • Erythrobacter neustonensis (isolates:1; rSTs:1)
          • Erythrobacter oryzae (isolates:1; rSTs:1)
          • Erythrobacter ramosus (isolates:3; rSTs:1)
          • Erythrobacter rubeus (isolates:1; rSTs:1)
          • Erythrobacter sanguineus (isolates:2; rSTs:1)
          • Erythrobacter sp. (isolates:13; rSTs:12 tree)
          • Erythrobacter tepidarius (isolates:1; rSTs:1)
        • Parapontixanthobacter (isolates:1; rSTs:1)
          • Parapontixanthobacter aurantiacus (isolates:1; rSTs:1)
        • Paraurantiacibacter (isolates:1; rSTs:1)
          • Paraurantiacibacter namhicola (isolates:1; rSTs:1)
        • Parerythrobacter (isolates:5; rSTs:4 tree)
          • Parerythrobacter aestuarii (isolates:1; rSTs:1)
          • Parerythrobacter jejuensis (isolates:2; rSTs:1)
          • Parerythrobacter lacustris (isolates:1; rSTs:1)
          • Parerythrobacter lutipelagi (isolates:1; rSTs:1)
        • Pelagerythrobacter (isolates:7; rSTs:6 tree)
          • Pelagerythrobacter aerophilus (isolates:1; rSTs:1)
          • Pelagerythrobacter marensis (isolates:3; rSTs:2)
          • Pelagerythrobacter marinus (isolates:2; rSTs:2)
          • Pelagerythrobacter rhizovicinus (isolates:1; rSTs:1)
        • Pontixanthobacter (isolates:8; rSTs:7 tree)
          • Pontixanthobacter aestiaquae (isolates:2; rSTs:1)
          • Pontixanthobacter aquaemixtae (isolates:1; rSTs:1)
          • Pontixanthobacter gangjinensis (isolates:1; rSTs:1)
          • Pontixanthobacter luteolus (isolates:2; rSTs:2)
          • Pontixanthobacter rizhaonensis (isolates:1; rSTs:1)
          • Pontixanthobacter sp. (isolates:1; rSTs:1)
        • Porphyrobacter (isolates:1; rSTs:1)
          • Porphyrobacter sp. (isolates:1; rSTs:1)
        • Pseudopontixanthobacter (isolates:1; rSTs:1)
          • Pseudopontixanthobacter vadosimaris (isolates:1; rSTs:1)
        • Qipengyuania (isolates:62; rSTs:58 tree)
          • Qipengyuania aerophila (isolates:1; rSTs:1)
          • Qipengyuania aestuarii (isolates:1; rSTs:1)
          • Qipengyuania algicida (isolates:1; rSTs:1)
          • Qipengyuania aquimaris (isolates:1; rSTs:1)
          • Qipengyuania aurantiaca (isolates:1; rSTs:1)
          • Qipengyuania benthica (isolates:1; rSTs:1)
          • Qipengyuania citrea (isolates:5; rSTs:4 tree)
          • Qipengyuania flava (isolates:13; rSTs:10 tree)
          • Qipengyuania gaetbuli (isolates:4; rSTs:4 tree)
          • Qipengyuania gelatinilytica (isolates:1; rSTs:1)
          • Qipengyuania huizhouensis (isolates:1; rSTs:1)
          • Qipengyuania intermedia (isolates:1; rSTs:1)
          • Qipengyuania marisflavi (isolates:1; rSTs:1)
          • Qipengyuania mesophila (isolates:1; rSTs:1)
          • Qipengyuania nanhaisediminis (isolates:1; rSTs:1)
          • Qipengyuania oceanensis (isolates:1; rSTs:1)
          • Qipengyuania pacifica (isolates:1; rSTs:1)
          • Qipengyuania pelagi (isolates:2; rSTs:1)
          • Qipengyuania polymorpha (isolates:1; rSTs:1)
          • Qipengyuania profundimaris (isolates:1; rSTs:1)
          • Qipengyuania proteolytica (isolates:1; rSTs:1)
          • Qipengyuania psychrotolerans (isolates:1; rSTs:1)
          • Qipengyuania qiaonensis (isolates:1; rSTs:1)
          • Qipengyuania sediminis (isolates:1; rSTs:1)
          • Qipengyuania seohaensis (isolates:1; rSTs:1)
          • Qipengyuania soli (isolates:1; rSTs:1)
          • Qipengyuania sp. (isolates:8; rSTs:9 tree)
          • Qipengyuania sphaerica (isolates:1; rSTs:1)
          • Qipengyuania spongiae (isolates:1; rSTs:1)
          • Qipengyuania thermophila (isolates:1; rSTs:1)
          • Qipengyuania vesicularis (isolates:1; rSTs:1)
          • Qipengyuania vulgaris (isolates:1; rSTs:1)
          • Qipengyuania xiamenensis (isolates:1; rSTs:1)
          • Qipengyuania xiapuensis (isolates:2; rSTs:2)
        • Tsuneonella (isolates:12; rSTs:11 tree)
          • Tsuneonella aeria (isolates:1; rSTs:1)
          • Tsuneonella amylolytica (isolates:1; rSTs:1)
          • Tsuneonella deserti (isolates:1; rSTs:1)
          • Tsuneonella dongtanensis (isolates:1; rSTs:1)
          • Tsuneonella flava (isolates:2; rSTs:2)
          • Tsuneonella litorea (isolates:1; rSTs:1)
          • Tsuneonella mangrovi (isolates:1; rSTs:1)
          • Tsuneonella rigui (isolates:1; rSTs:1)
          • Tsuneonella suprasediminis (isolates:1; rSTs:1)
          • Tsuneonella troitsensis (isolates:2; rSTs:1)
      • Sphingomonadaceae (isolates:1177; rSTs:872 tree)
        • Allosphingosinicella (isolates:2; rSTs:2)
          • Allosphingosinicella indica (isolates:1; rSTs:1)
          • Allosphingosinicella vermicomposti (isolates:1; rSTs:1)
        • Aquisediminimonas (isolates:2; rSTs:2)
          • Aquisediminimonas profunda (isolates:1; rSTs:1)
          • Aquisediminimonas sediminicola (isolates:1; rSTs:1)
        • Blastomonas (isolates:28; rSTs:12 tree)
          • Blastomonas aquatica (isolates:1; rSTs:1)
          • Blastomonas fulva (isolates:1; rSTs:1)
          • Blastomonas marina (isolates:2; rSTs:2)
          • Blastomonas natatoria (isolates:1; rSTs:1)
          • Blastomonas sp. (isolates:23; rSTs:7 tree)
        • Citromicrobium (isolates:10; rSTs:5 tree)
          • Citromicrobium bathyomarinum (isolates:2; rSTs:2)
          • Citromicrobium sp. (isolates:8; rSTs:3 tree)
        • Hankyongella (isolates:1)
          • Hankyongella ginsenosidimutans (isolates:1)
        • Hephaestia (isolates:3; rSTs:3 tree)
          • Hephaestia caeni (isolates:1; rSTs:1)
          • Hephaestia mangrovi (isolates:1; rSTs:1)
          • Hephaestia sp. (isolates:1; rSTs:1)
        • Novosphingobium (isolates:195; rSTs:144 tree)
          • Novosphingobium acidiphilum (isolates:1; rSTs:1)
          • Novosphingobium aerophilum (isolates:2; rSTs:2)
          • Novosphingobium album (isolates:1; rSTs:1)
          • Novosphingobium album (ex Liu et al. 2023) (isolates:1; rSTs:1)
          • Novosphingobium aquimarinum (isolates:1; rSTs:1)
          • Novosphingobium aromaticivorans (isolates:2; rSTs:1)
          • Novosphingobium arvoryzae (isolates:1; rSTs:1)
          • Novosphingobium aureum (isolates:1; rSTs:1)
          • Novosphingobium barchaimii (isolates:1; rSTs:1)
          • Novosphingobium beihaiensis (isolates:1; rSTs:1)
          • Novosphingobium capsulatum (isolates:3; rSTs:2)
          • Novosphingobium chloroacetimidivorans (isolates:1; rSTs:1)
          • Novosphingobium clariflavum (isolates:1; rSTs:1)
          • Novosphingobium colocasiae (isolates:1; rSTs:1)
          • Novosphingobium cyanobacteriorum (isolates:1; rSTs:1)
          • Novosphingobium decolorationis (isolates:1; rSTs:1)
          • Novosphingobium endophyticum (isolates:1; rSTs:1)
          • Novosphingobium flavum (isolates:1; rSTs:1)
          • Novosphingobium fluoreni (isolates:1; rSTs:1)
          • Novosphingobium fuchskuhlense (isolates:1; rSTs:1)
          • Novosphingobium ginsenosidimutans (isolates:2; rSTs:1)
          • Novosphingobium guangzhouense (isolates:1; rSTs:1)
          • Novosphingobium hassiacum (isolates:1; rSTs:1)
          • Novosphingobium huizhouense (isolates:1; rSTs:1)
          • Novosphingobium humi (isolates:2; rSTs:2)
          • Novosphingobium indicum (isolates:1; rSTs:1)
          • Novosphingobium jiangmenense (isolates:1; rSTs:1)
          • Novosphingobium kaempferiae (isolates:1; rSTs:1)
          • Novosphingobium kunmingense (isolates:1; rSTs:1)
          • Novosphingobium lentum (isolates:1; rSTs:1)
          • Novosphingobium lindaniclasticum (isolates:1; rSTs:1)
          • Novosphingobium malaysiense (isolates:1; rSTs:1)
          • Novosphingobium mangrovi (isolates:1; rSTs:1)
          • Novosphingobium mangrovi (ex Huang et al. 2023) (isolates:1; rSTs:1)
          • Novosphingobium marinum (isolates:2; rSTs:1)
          • Novosphingobium mathurense (isolates:1; rSTs:1)
          • Novosphingobium meiothermophilum (isolates:1; rSTs:1)
          • Novosphingobium naphthalenivorans (isolates:1; rSTs:1)
          • Novosphingobium nitrogenifigens (isolates:2; rSTs:1)
          • Novosphingobium olei (isolates:2; rSTs:2)
          • Novosphingobium organovorum (isolates:1; rSTs:1)
          • Novosphingobium ovatum (isolates:1; rSTs:1)
          • Novosphingobium panipatense (isolates:1; rSTs:1)
          • Novosphingobium pentaromativorans (isolates:1; rSTs:1)
          • Novosphingobium percolationis (isolates:1; rSTs:1)
          • Novosphingobium piscinae (isolates:1; rSTs:1)
          • Novosphingobium pokkalii (isolates:1; rSTs:1)
          • Novosphingobium profundi (isolates:1; rSTs:1)
          • Novosphingobium resinovorum (isolates:5; rSTs:5 tree)
          • Novosphingobium rosa (isolates:1; rSTs:1)
          • Novosphingobium sediminicola (isolates:1; rSTs:1)
          • Novosphingobium sediminis (isolates:1; rSTs:1)
          • Novosphingobium silvae (isolates:1; rSTs:1)
          • Novosphingobium sp. (isolates:123; rSTs:79 tree)
          • Novosphingobium subterraneum (isolates:2; rSTs:1)
          • Novosphingobium taihuense (isolates:2; rSTs:1)
          • Novosphingobium terrae (isolates:1; rSTs:1)
          • Novosphingobium umbonatum (isolates:1; rSTs:1)
        • Novosphingopyxis (isolates:3; rSTs:3 tree)
          • Novosphingopyxis baekryungensis (isolates:1; rSTs:1)
          • Novosphingopyxis iocasae (isolates:1; rSTs:1)
          • Novosphingopyxis sp. (isolates:1; rSTs:1)
        • Parasphingopyxis (isolates:4; rSTs:4 tree)
          • Parasphingopyxis algicola (isolates:1; rSTs:1)
          • Parasphingopyxis lamellibrachiae (isolates:1; rSTs:1)
          • Parasphingopyxis marina (isolates:1; rSTs:1)
          • Parasphingopyxis sp. (isolates:1; rSTs:1)
        • Parasphingorhabdus (isolates:7; rSTs:6 tree)
          • Parasphingorhabdus cellanae (isolates:1; rSTs:1)
          • Parasphingorhabdus flavimaris (isolates:1; rSTs:1)
          • Parasphingorhabdus halotolerans (isolates:1; rSTs:1)
          • Parasphingorhabdus litoris (isolates:2; rSTs:1)
          • Parasphingorhabdus marina (isolates:1; rSTs:1)
          • Parasphingorhabdus sp. (isolates:1; rSTs:1)
        • Rhizorhabdus (isolates:10; rSTs:9 tree)
          • Rhizorhabdus argentea (isolates:1; rSTs:1)
          • Rhizorhabdus dicambivorans (isolates:2; rSTs:1)
          • Rhizorhabdus histidinilytica (isolates:2; rSTs:2)
          • Rhizorhabdus phycosphaerae (isolates:1; rSTs:1)
          • Rhizorhabdus wittichii (isolates:4; rSTs:4 tree)
        • Rhizorhapis (isolates:1; rSTs:1)
          • Rhizorhapis suberifaciens (isolates:1; rSTs:1)
        • Sphingobium (isolates:202; rSTs:153 tree)
          • Sphingobium abikonense (isolates:1; rSTs:1)
          • Sphingobium agri (isolates:1; rSTs:1)
          • Sphingobium algorifonticola (isolates:1; rSTs:1)
          • Sphingobium amiense (isolates:2; rSTs:1)
          • Sphingobium aquiterrae (isolates:1; rSTs:1)
          • Sphingobium aromaticiconvertens (isolates:1; rSTs:1)
          • Sphingobium aromaticivastans (isolates:1)
          • Sphingobium arseniciresistens (isolates:1; rSTs:1)
          • Sphingobium baderi (isolates:3; rSTs:2)
          • Sphingobium bisphenolivorans (isolates:1; rSTs:1)
          • Sphingobium boeckii (isolates:1; rSTs:1)
          • Sphingobium chlorophenolicum (isolates:3; rSTs:2)
          • Sphingobium chungbukense (isolates:1; rSTs:1)
          • Sphingobium cloacae (isolates:2; rSTs:1)
          • Sphingobium cupriresistens (isolates:2; rSTs:2)
          • Sphingobium cyanobacteriorum (isolates:1; rSTs:1)
          • Sphingobium estronivorans (isolates:1; rSTs:1)
          • Sphingobium fluviale (isolates:1; rSTs:1)
          • Sphingobium fontiphilum (isolates:1; rSTs:1)
          • Sphingobium fuliginis (isolates:7; rSTs:5 tree)
          • Sphingobium herbicidovorans (isolates:3; rSTs:1)
          • Sphingobium indicum (isolates:5; rSTs:3 tree)
          • Sphingobium jiangsuense (isolates:2; rSTs:1)
          • Sphingobium lactosutens (isolates:1; rSTs:1)
          • Sphingobium lignivorans (isolates:1; rSTs:1)
          • Sphingobium limneticum (isolates:3; rSTs:2)
          • Sphingobium mellinum (isolates:1; rSTs:1)
          • Sphingobium naphthae (isolates:2; rSTs:2)
          • Sphingobium nicotianae (isolates:1; rSTs:1)
          • Sphingobium phenoxybenzoativorans (isolates:2; rSTs:2)
          • Sphingobium psychrophilum (isolates:1; rSTs:1)
          • Sphingobium quisquiliarum (isolates:1; rSTs:1)
          • Sphingobium scionense (isolates:1; rSTs:1)
          • Sphingobium soli (isolates:1; rSTs:1)
          • Sphingobium sp. (isolates:107; rSTs:78 tree)
          • Sphingobium subterraneum (isolates:1; rSTs:1)
          • Sphingobium sufflavum (isolates:1; rSTs:1)
          • Sphingobium terrigena (isolates:1; rSTs:1)
          • Sphingobium ummariense (isolates:1; rSTs:1)
          • Sphingobium vermicomposti (isolates:1; rSTs:1)
          • Sphingobium wenxiniae (isolates:2; rSTs:1)
          • Sphingobium xanthum (isolates:1; rSTs:1)
          • Sphingobium xenophagum (isolates:5; rSTs:5 tree)
          • Sphingobium yanoikuyae (isolates:24; rSTs:18 tree)
        • Sphingomicrobium (isolates:14; rSTs:11 tree)
          • Sphingomicrobium aestuariivivum (isolates:2; rSTs:1)
          • Sphingomicrobium arenosum (isolates:1; rSTs:1)
          • Sphingomicrobium astaxanthinifaciens (isolates:2; rSTs:1)
          • Sphingomicrobium clamense (isolates:1; rSTs:1)
          • Sphingomicrobium flavum (isolates:1; rSTs:1)
          • Sphingomicrobium lutaoense (isolates:2; rSTs:1)
          • Sphingomicrobium marinum (isolates:1; rSTs:1)
          • Sphingomicrobium nitratireducens (isolates:1; rSTs:1)
          • Sphingomicrobium sediminis (isolates:1; rSTs:1)
          • Sphingomicrobium sp. (isolates:2; rSTs:2 tree)
        • Sphingomonas (isolates:574; rSTs:427 tree)
          • Sphingomonas abaci (isolates:1; rSTs:1)
          • Sphingomonas abietis (isolates:1; rSTs:1)
          • Sphingomonas adhaesiva (isolates:2; rSTs:1)
          • Sphingomonas aerolata (isolates:11; rSTs:9 tree)
          • Sphingomonas aerophila (isolates:1; rSTs:1)
          • Sphingomonas agri (isolates:1; rSTs:1)
          • Sphingomonas alba (isolates:1; rSTs:1)
          • Sphingomonas albertensis (isolates:1; rSTs:1)
          • Sphingomonas aliaeris (isolates:1; rSTs:1)
          • Sphingomonas alpina (isolates:2; rSTs:1)
          • Sphingomonas anseongensis (isolates:1; rSTs:1)
          • Sphingomonas aquatilis (isolates:2; rSTs:1)
          • Sphingomonas aracearum (isolates:1; rSTs:1)
          • Sphingomonas arenae (isolates:2; rSTs:1)
          • Sphingomonas asaccharolytica (isolates:1; rSTs:1)
          • Sphingomonas astaxanthinifaciens (isolates:2; rSTs:2)
          • Sphingomonas aurantiaca (isolates:6; rSTs:6 tree)
          • Sphingomonas azotifigens (isolates:1; rSTs:1)
          • Sphingomonas baiyangensis (isolates:1; rSTs:1)
          • Sphingomonas beigongshangi (isolates:2; rSTs:2)
          • Sphingomonas brevis (isolates:1)
          • Sphingomonas caeni (isolates:1)
          • Sphingomonas canadensis (isolates:1; rSTs:1)
          • Sphingomonas cannabina (isolates:1; rSTs:1)
          • Sphingomonas carotinifaciens (isolates:4; rSTs:2)
          • Sphingomonas caseinilyticus (isolates:1; rSTs:1)
          • Sphingomonas cavernae (isolates:1; rSTs:1)
          • Sphingomonas changbaiensis (isolates:1; rSTs:1)
          • Sphingomonas changnyeongensis (isolates:1; rSTs:1)
          • Sphingomonas chungangi (isolates:2; rSTs:1)
          • Sphingomonas citri (isolates:1; rSTs:1)
          • Sphingomonas citricola (isolates:1; rSTs:1)
          • Sphingomonas colocasiae (isolates:1; rSTs:1)
          • Sphingomonas corticis (isolates:1; rSTs:1)
          • Sphingomonas cremea (isolates:1; rSTs:1)
          • Sphingomonas crocodyli (isolates:1; rSTs:1)
          • Sphingomonas crusticola (isolates:1; rSTs:1)
          • Sphingomonas cynarae (isolates:1; rSTs:1)
          • Sphingomonas daechungensis (isolates:2; rSTs:1)
          • Sphingomonas deserti (isolates:1; rSTs:1)
          • Sphingomonas desiccabilis (isolates:3; rSTs:1)
          • Sphingomonas dokdonensis (isolates:1; rSTs:1)
          • Sphingomonas donggukensis (isolates:1; rSTs:1)
          • Sphingomonas echinoides (isolates:3; rSTs:2)
          • Sphingomonas edaphi (isolates:1; rSTs:1)
          • Sphingomonas elodea (isolates:1; rSTs:1)
          • Sphingomonas endolithica (isolates:1; rSTs:1)
          • Sphingomonas endophytica (isolates:1; rSTs:1)
          • Sphingomonas faeni (isolates:6; rSTs:5 tree)
          • Sphingomonas fennica (isolates:1; rSTs:1)
          • Sphingomonas flavalba (isolates:1; rSTs:1)
          • Sphingomonas flavescens (isolates:1; rSTs:1)
          • Sphingomonas folli (isolates:1; rSTs:1)
          • Sphingomonas formosensis (isolates:1; rSTs:1)
          • Sphingomonas gei (isolates:1; rSTs:1)
          • Sphingomonas gellani (isolates:1; rSTs:1)
          • Sphingomonas gilva (isolates:1; rSTs:1)
          • Sphingomonas ginkgonis (isolates:1; rSTs:1)
          • Sphingomonas ginsengisoli An et al. 2013 (isolates:1)
          • Sphingomonas ginsenosidimutans (isolates:1; rSTs:1)
          • Sphingomonas ginsenosidivorax (isolates:1; rSTs:1)
          • Sphingomonas glacialis (isolates:2; rSTs:2)
          • Sphingomonas glaciei (isolates:1; rSTs:1)
          • Sphingomonas guangdongensis (isolates:1; rSTs:1)
          • Sphingomonas haloaromaticamans (isolates:1; rSTs:1)
          • Sphingomonas hankookensis (isolates:1; rSTs:1)
          • Sphingomonas hankyongi (isolates:1; rSTs:1)
          • Sphingomonas hengshuiensis (isolates:1; rSTs:1)
          • Sphingomonas hominis (isolates:1; rSTs:1)
          • Sphingomonas horti (isolates:1; rSTs:1)
          • Sphingomonas humi (isolates:1; rSTs:1)
          • Sphingomonas hylomeconis (isolates:1; rSTs:1)
          • Sphingomonas immobilis (isolates:1; rSTs:1)
          • Sphingomonas insulae (isolates:3; rSTs:1)
          • Sphingomonas japonica (isolates:3; rSTs:1)
          • Sphingomonas jaspsi (isolates:1; rSTs:1)
          • Sphingomonas jatrophae (isolates:1; rSTs:1)
          • Sphingomonas jeddahensis (isolates:1; rSTs:1)
          • Sphingomonas jejuensis (isolates:1; rSTs:1)
          • Sphingomonas jinjuensis (isolates:1; rSTs:1)
          • Sphingomonas kaistensis (isolates:2; rSTs:2)
          • Sphingomonas koreensis (isolates:75; rSTs:6 tree)
          • Sphingomonas kyeonggiensis (isolates:2; rSTs:2)
          • Sphingomonas kyungheensis (isolates:1; rSTs:1)
          • Sphingomonas lacunae (isolates:1; rSTs:1)
          • Sphingomonas lacusdianchii (isolates:1; rSTs:1)
          • Sphingomonas laterariae (isolates:1)
          • Sphingomonas leidyi (isolates:1; rSTs:1)
          • Sphingomonas lenta (isolates:1; rSTs:1)
          • Sphingomonas limnosediminicola (isolates:1; rSTs:1)
          • Sphingomonas liriopis (isolates:1; rSTs:1)
          • Sphingomonas lutea (isolates:3; rSTs:2)
          • Sphingomonas lycopersici (isolates:2; rSTs:2)
          • Sphingomonas mali (isolates:1; rSTs:1)
          • Sphingomonas melonis (isolates:9; rSTs:4 tree)
          • Sphingomonas metalli (isolates:1; rSTs:1)
          • Sphingomonas molluscorum (isolates:2; rSTs:2)
          • Sphingomonas montana (isolates:1; rSTs:1)
          • Sphingomonas montanisoli (isolates:1; rSTs:1)
          • Sphingomonas morindae (isolates:1; rSTs:1)
          • Sphingomonas mucosissima (isolates:1; rSTs:1)
          • Sphingomonas naasensis (isolates:2; rSTs:1)
          • Sphingomonas naphthae (isolates:1; rSTs:1)
          • Sphingomonas natans (isolates:1; rSTs:1)
          • Sphingomonas nostoxanthinifaciens (isolates:1; rSTs:1)
          • Sphingomonas olei (isolates:1; rSTs:1)
          • Sphingomonas oleivorans (isolates:1; rSTs:1)
          • Sphingomonas oligoaromativorans (isolates:1; rSTs:1)
          • Sphingomonas oligophenolica (isolates:1; rSTs:1)
          • Sphingomonas oryzagri (isolates:1; rSTs:1)
          • Sphingomonas paeninsulae (isolates:1; rSTs:1)
          • Sphingomonas palmae (isolates:1; rSTs:1)
          • Sphingomonas panacis (isolates:1; rSTs:1)
          • Sphingomonas panacisoli (isolates:1; rSTs:1)
          • Sphingomonas panni (isolates:2; rSTs:1)
          • Sphingomonas parapaucimobilis (isolates:2; rSTs:2)
          • Sphingomonas parva (isolates:1; rSTs:1)
          • Sphingomonas paucimobilis (isolates:11; rSTs:3 tree)
          • Sphingomonas phyllosphaerae (isolates:1; rSTs:1)
          • Sphingomonas piscis (isolates:1; rSTs:1)
          • Sphingomonas pituitosa (isolates:1; rSTs:1)
          • Sphingomonas pokkalii (isolates:1; rSTs:1)
          • Sphingomonas pollutisoli (isolates:1; rSTs:1)
          • Sphingomonas populi (isolates:1; rSTs:1)
          • Sphingomonas prati (isolates:3; rSTs:1)
          • Sphingomonas profundi (isolates:1; rSTs:1)
          • Sphingomonas pruni (isolates:1; rSTs:1)
          • Sphingomonas pseudosanguinis (isolates:2; rSTs:1)
          • Sphingomonas psychrolutea (isolates:1; rSTs:1)
          • Sphingomonas psychrotolerans (isolates:1; rSTs:1)
          • Sphingomonas qilianensis (isolates:1; rSTs:1)
          • Sphingomonas qomolangmaensis (isolates:1; rSTs:1)
          • Sphingomonas radiodurans (isolates:1; rSTs:1)
          • Sphingomonas rhizophila (isolates:1; rSTs:1)
          • Sphingomonas rosea (isolates:1; rSTs:1)
          • Sphingomonas rubra (isolates:1; rSTs:1)
          • Sphingomonas sabuli (isolates:1; rSTs:1)
          • Sphingomonas sanguinis (isolates:7; rSTs:4 tree)
          • Sphingomonas sanxanigenens (isolates:1; rSTs:1)
          • Sphingomonas sediminicola (isolates:1; rSTs:1)
          • Sphingomonas segetis (isolates:1; rSTs:1)
          • Sphingomonas sinipercae (isolates:1; rSTs:1)
          • Sphingomonas solaris (isolates:1; rSTs:1)
          • Sphingomonas soli (isolates:1; rSTs:1)
          • Sphingomonas sp. (isolates:258; rSTs:226 tree)
          • Sphingomonas spermidinifaciens (isolates:1; rSTs:1)
          • Sphingomonas suaedae (isolates:1; rSTs:1)
          • Sphingomonas swuensis (isolates:1; rSTs:1)
          • Sphingomonas tagetis (isolates:1; rSTs:1)
          • Sphingomonas taxi (isolates:1; rSTs:1)
          • Sphingomonas telluris (isolates:1; rSTs:1)
          • Sphingomonas trueperi (isolates:4; rSTs:4 tree)
          • Sphingomonas turrisvirgatae (isolates:1; rSTs:1)
          • Sphingomonas vulcanisoli (isolates:1; rSTs:1)
          • Sphingomonas xanthus (isolates:1; rSTs:1)
          • Sphingomonas xinjiangensis (isolates:1; rSTs:1)
          • Sphingomonas yabuuchiae (isolates:3; rSTs:2)
          • Sphingomonas yantingensis (isolates:1; rSTs:1)
          • Sphingomonas yunnanensis (isolates:1; rSTs:1)
          • Sphingomonas zeae (isolates:3; rSTs:2)
        • Sphingopyxis (isolates:102; rSTs:75 tree)
          • Sphingopyxis alaskensis (isolates:2; rSTs:2)
          • Sphingopyxis bauzanensis (isolates:2; rSTs:1)
          • Sphingopyxis chilensis (isolates:1; rSTs:1)
          • Sphingopyxis flava (isolates:1; rSTs:1)
          • Sphingopyxis fribergensis (isolates:1; rSTs:1)
          • Sphingopyxis granuli (isolates:5; rSTs:5 tree)
          • Sphingopyxis indica (isolates:2; rSTs:2)
          • Sphingopyxis italica (isolates:1; rSTs:1)
          • Sphingopyxis jiangsuensis (isolates:1; rSTs:1)
          • Sphingopyxis lindanitolerans (isolates:1; rSTs:1)
          • Sphingopyxis lutea (isolates:1; rSTs:1)
          • Sphingopyxis macrogoltabida (isolates:3; rSTs:2)
          • Sphingopyxis microcysteis (isolates:1; rSTs:1)
          • Sphingopyxis panaciterrae (isolates:1; rSTs:1)
          • Sphingopyxis panaciterrulae (isolates:1; rSTs:1)
          • Sphingopyxis soli (isolates:2; rSTs:1)
          • Sphingopyxis solisilvae (isolates:1; rSTs:1)
          • Sphingopyxis sp. (isolates:67; rSTs:45 tree)
          • Sphingopyxis terrae (isolates:6; rSTs:4 tree)
          • Sphingopyxis witflariensis (isolates:1; rSTs:1)
          • Sphingopyxis yananensis (isolates:1; rSTs:1)
        • Sphingorhabdus (isolates:8; rSTs:7 tree)
          • Sphingorhabdus contaminans (isolates:1; rSTs:1)
          • Sphingorhabdus lacus (isolates:1; rSTs:1)
          • Sphingorhabdus lutea (isolates:1; rSTs:1)
          • Sphingorhabdus profundilacus (isolates:1; rSTs:1)
          • Sphingorhabdus rigui (isolates:2; rSTs:1)
          • Sphingorhabdus soli (isolates:1; rSTs:1)
          • Sphingorhabdus wooponensis (isolates:1; rSTs:1)
        • Sphingosinithalassobacter (isolates:3; rSTs:3 tree)
          • Sphingosinithalassobacter portus (isolates:1; rSTs:1)
          • Sphingosinithalassobacter sp. (isolates:1; rSTs:1)
          • Sphingosinithalassobacter tenebrarum (isolates:1; rSTs:1)
        • Stakelama (isolates:7; rSTs:5 tree)
          • Stakelama flava (isolates:1; rSTs:1)
          • Stakelama marina (isolates:1; rSTs:1)
          • Stakelama pacifica (isolates:2; rSTs:1)
          • Stakelama saccharophila (isolates:1; rSTs:1)
          • Stakelama sediminis (isolates:2; rSTs:1)
        • Tardibacter (isolates:1)
          • Tardibacter chloracetimidivorans (isolates:1)
      • Sphingosinicellaceae (isolates:37; rSTs:31 tree)
        • Glacieibacterium (isolates:1; rSTs:1)
          • Glacieibacterium frigidum (isolates:1; rSTs:1)
        • Pacificimonas (isolates:4; rSTs:3 tree)
          • Pacificimonas aurantium (isolates:1; rSTs:1)
          • Pacificimonas flava (isolates:2; rSTs:1)
          • Pacificimonas pallii (isolates:1; rSTs:1)
        • Pedomonas (isolates:1; rSTs:1)
          • Pedomonas mirosovicensis (isolates:1; rSTs:1)
        • Polymorphobacter (isolates:9; rSTs:6 tree)
          • Polymorphobacter arshaanensis (isolates:1; rSTs:1)
          • Polymorphobacter fuscus (isolates:3; rSTs:1)
          • Polymorphobacter glacialis (isolates:1; rSTs:1)
          • Polymorphobacter megasporae (isolates:1; rSTs:1)
          • Polymorphobacter multimanifer (isolates:2; rSTs:1)
          • Polymorphobacter sp. (isolates:1; rSTs:1)
        • Sandaracinobacter (isolates:1; rSTs:1)
          • Sandaracinobacter neustonicus (isolates:1; rSTs:1)
        • Sandaracinobacteroides (isolates:3; rSTs:3 tree)
          • Sandaracinobacteroides hominis (isolates:1; rSTs:1)
          • Sandaracinobacteroides saxicola (isolates:1; rSTs:1)
          • Sandaracinobacteroides sayramensis (isolates:1; rSTs:1)
        • Sandarakinorhabdus (isolates:5; rSTs:5 tree)
          • Sandarakinorhabdus cyanobacteriorum (isolates:1; rSTs:1)
          • Sandarakinorhabdus limnophila (isolates:1; rSTs:1)
          • Sandarakinorhabdus oryzae (isolates:1; rSTs:1)
          • Sandarakinorhabdus rubra (isolates:1; rSTs:1)
          • Sandarakinorhabdus sp. (isolates:1; rSTs:1)
        • Sphingosinicella (isolates:11; rSTs:10 tree)
          • Sphingosinicella flava (isolates:1; rSTs:1)
          • Sphingosinicella ginsenosidimutans (isolates:2; rSTs:2)
          • Sphingosinicella humi (isolates:1; rSTs:1)
          • Sphingosinicella microcystinivorans (isolates:2; rSTs:1)
          • Sphingosinicella soli (isolates:1; rSTs:1)
          • Sphingosinicella sp. (isolates:4; rSTs:4 tree)
        • Thermaurantiacus (isolates:2; rSTs:1)
          • Thermaurantiacus tibetensis (isolates:2; rSTs:1)
      • Zymomonadaceae (isolates:29; rSTs:15 tree)
        • Zymomonas (isolates:29; rSTs:15 tree)
          • Zymomonas mobilis (isolates:29; rSTs:15 tree)
  • Betaproteobacteria (isolates:91131; rSTs:31342)
    • Burkholderiales (isolates:11356; rSTs:5559)
      • Alcaligenaceae (isolates:2621; rSTs:675 tree)
        • Achromobacter (isolates:358; rSTs:258 tree)
          • Achromobacter aegrifaciens (isolates:11; rSTs:10 tree)
          • Achromobacter aestuarii (isolates:1; rSTs:1)
          • Achromobacter agilis (isolates:1; rSTs:1)
          • Achromobacter aloeverae (isolates:1; rSTs:1)
          • Achromobacter animicus (isolates:4; rSTs:4 tree)
          • Achromobacter anxifer (isolates:4; rSTs:4 tree)
          • Achromobacter arsenitoxydans (isolates:1; rSTs:1)
          • Achromobacter deleyi (isolates:4; rSTs:2)
          • Achromobacter denitrificans (isolates:18; rSTs:12 tree)
          • Achromobacter dolens (isolates:8; rSTs:8 tree)
          • Achromobacter insolitus (isolates:19; rSTs:14 tree)
          • Achromobacter insuavis (isolates:15; rSTs:9 tree)
          • Achromobacter kerstersii (isolates:4; rSTs:4 tree)
          • Achromobacter marplatensis (isolates:5; rSTs:3 tree)
          • Achromobacter mucicolens (isolates:15; rSTs:15 tree)
          • Achromobacter pestifer (isolates:1; rSTs:1)
          • Achromobacter piechaudii (isolates:7; rSTs:5 tree)
          • Achromobacter pulmonis (isolates:3; rSTs:3 tree)
          • Achromobacter ruhlandii (isolates:32; rSTs:19 tree)
          • Achromobacter seleniivolatilans (isolates:1; rSTs:1)
          • Achromobacter sp. (isolates:48; rSTs:42 tree)
          • Achromobacter spanius (isolates:9; rSTs:6 tree)
          • Achromobacter veterisilvae (isolates:2; rSTs:2)
          • Achromobacter xylosoxidans (isolates:144; rSTs:90 tree)
        • Advenella (isolates:11; rSTs:10 tree)
          • Advenella alkanexedens (isolates:2; rSTs:2)
          • Advenella faeciporci (isolates:2; rSTs:1)
          • Advenella incenata (isolates:1; rSTs:1)
          • Advenella kashmirensis (isolates:1; rSTs:1)
          • Advenella mandrilli (isolates:1; rSTs:1)
          • Advenella mimigardefordensis (isolates:1; rSTs:1)
          • Advenella sp. (isolates:3; rSTs:3 tree)
        • Alcaligenes (isolates:65; rSTs:60 tree)
          • Alcaligenes ammonioxydans (isolates:2; rSTs:2)
          • Alcaligenes aquatilis (isolates:5; rSTs:5 tree)
          • Alcaligenes endophyticus (isolates:2; rSTs:1)
          • Alcaligenes faecalis (isolates:32; rSTs:18 tree)
          • Alcaligenes nematophilus (isolates:6; rSTs:2)
          • Alcaligenes pakistanensis (isolates:1; rSTs:1)
          • Alcaligenes parafaecalis (isolates:1; rSTs:1)
          • Alcaligenes phenolicus (isolates:2; rSTs:1)
          • Alcaligenes sp. (isolates:14; rSTs:29 tree)
        • Allopusillimonas (isolates:4; rSTs:3 tree)
          • Allopusillimonas ginsengisoli (isolates:2; rSTs:2)
          • Allopusillimonas soli (isolates:2; rSTs:1)
        • Basilea (isolates:2; rSTs:1)
          • Basilea psittacipulmonis (isolates:2; rSTs:1)
        • Bordetella (isolates:2003; rSTs:221 tree)
          • Bordetella ansorpii (isolates:3; rSTs:2)
          • Bordetella avium (isolates:32; rSTs:9 tree)
          • Bordetella bronchialis (isolates:2; rSTs:2)
          • Bordetella bronchiseptica (isolates:145; rSTs:74 tree)
          • Bordetella flabilis (isolates:1; rSTs:1)
          • Bordetella genomosp. 1 (isolates:2; rSTs:2)
          • Bordetella genomosp. 10 (isolates:1; rSTs:1)
          • Bordetella genomosp. 11 (isolates:1; rSTs:1)
          • Bordetella genomosp. 12 (isolates:1; rSTs:1)
          • Bordetella genomosp. 13 (isolates:1; rSTs:1)
          • Bordetella genomosp. 2 (isolates:1; rSTs:1)
          • Bordetella genomosp. 4 (isolates:2; rSTs:2)
          • Bordetella genomosp. 5 (isolates:2; rSTs:2)
          • Bordetella genomosp. 7 (isolates:2; rSTs:2)
          • Bordetella genomosp. 8 (isolates:1; rSTs:1)
          • Bordetella genomosp. 9 (isolates:2; rSTs:2)
          • Bordetella hinzii (isolates:35; rSTs:21 tree)
          • Bordetella holmesii (isolates:102; rSTs:8 tree)
          • Bordetella parapertussis (isolates:102; rSTs:7 tree)
          • Bordetella pertussis (isolates:1522; rSTs:54 tree)
          • Bordetella petrii (isolates:3; rSTs:3 tree)
          • Bordetella pseudohinzii (isolates:8; rSTs:3 tree)
          • Bordetella sp. (isolates:18; rSTs:11 tree)
          • Bordetella trematum (isolates:14; rSTs:10 tree)
        • Brackiella (isolates:1; rSTs:1)
          • Brackiella oedipodis (isolates:1; rSTs:1)
        • Candidimonas (isolates:2; rSTs:2 tree)
          • Candidimonas humi (isolates:1; rSTs:1)
          • Candidimonas nitroreducens (isolates:1; rSTs:1)
        • Castellaniella (isolates:15; rSTs:11 tree)
          • Castellaniella caeni (isolates:2; rSTs:2)
          • Castellaniella daejeonensis (isolates:1; rSTs:1)
          • Castellaniella defragrans (isolates:3; rSTs:2)
          • Castellaniella denitrificans (isolates:1; rSTs:1)
          • Castellaniella ginsengisoli (isolates:1; rSTs:1)
          • Castellaniella sp. (isolates:7; rSTs:4 tree)
        • Corticimicrobacter (isolates:1; rSTs:1)
          • Corticimicrobacter populi (isolates:1; rSTs:1)
        • Derxia (isolates:2; rSTs:2)
          • Derxia gummosa (isolates:1; rSTs:1)
          • Derxia lacustris (isolates:1; rSTs:1)
        • Eoetvoesiella (isolates:3; rSTs:1)
          • Eoetvoesiella caeni (isolates:3; rSTs:1)
        • Jezberella (isolates:1; rSTs:1)
          • Jezberella montanilacus (isolates:1; rSTs:1)
        • Kerstersia (isolates:17; rSTs:10 tree)
          • Kerstersia gyiorum (isolates:17; rSTs:10 tree)
        • Mesopusillimonas (isolates:1; rSTs:1)
          • Mesopusillimonas faecipullorum (isolates:1; rSTs:1)
        • Neopusillimonas (isolates:2; rSTs:2)
          • Neopusillimonas maritima (isolates:2; rSTs:2)
        • Oligella (isolates:21; rSTs:15 tree)
          • Oligella sp. (isolates:2; rSTs:2)
          • Oligella ureolytica (isolates:4; rSTs:2)
          • Oligella urethralis (isolates:15; rSTs:11 tree)
        • Orrella (isolates:3; rSTs:3 tree)
          • Orrella daihaiensis (isolates:1; rSTs:1)
          • Orrella dioscoreae (isolates:1; rSTs:1)
          • Orrella marina (isolates:1; rSTs:1)
        • Paenalcaligenes (isolates:7; rSTs:6 tree)
          • Paenalcaligenes faecalis (isolates:1; rSTs:1)
          • Paenalcaligenes hermetiae (isolates:1; rSTs:1)
          • Paenalcaligenes hominis (isolates:3; rSTs:2)
          • Paenalcaligenes niemegkensis (isolates:1; rSTs:1)
          • Paenalcaligenes suwonensis (isolates:1; rSTs:1)
        • Paracandidimonas (isolates:1; rSTs:1)
          • Paracandidimonas soli (isolates:1; rSTs:1)
        • Paralcaligenes (isolates:2; rSTs:2)
          • Paralcaligenes sp. (isolates:1; rSTs:1)
          • Paralcaligenes ureilyticus (isolates:1; rSTs:1)
        • Parapusillimonas (isolates:2; rSTs:1)
          • Parapusillimonas granuli (isolates:2; rSTs:1)
        • Parvibium (isolates:1; rSTs:1)
          • Parvibium lacunae (isolates:1; rSTs:1)
        • Pelistega (isolates:8; rSTs:7 tree)
          • Pelistega europaea (isolates:1; rSTs:1)
          • Pelistega indica (isolates:2; rSTs:1)
          • Pelistega ratti (isolates:2; rSTs:2)
          • Pelistega sp. (isolates:1; rSTs:1)
          • Pelistega suis (isolates:2; rSTs:2)
        • Pigmentiphaga (isolates:15; rSTs:13 tree)
          • Pigmentiphaga aceris (isolates:1; rSTs:1)
          • Pigmentiphaga daeguensis (isolates:1; rSTs:1)
          • Pigmentiphaga humi (isolates:1; rSTs:1)
          • Pigmentiphaga kullae (isolates:1; rSTs:1)
          • Pigmentiphaga litoralis (isolates:3; rSTs:2)
          • Pigmentiphaga soli (isolates:1; rSTs:1)
          • Pigmentiphaga sp. (isolates:7; rSTs:6 tree)
        • Pollutimonas (isolates:6; rSTs:5 tree)
          • Pollutimonas bauzanensis (isolates:1; rSTs:1)
          • Pollutimonas harenae (isolates:2; rSTs:1)
          • Pollutimonas nitritireducens (isolates:1; rSTs:1)
          • Pollutimonas subterranea (isolates:1; rSTs:1)
          • Pollutimonas thiosulfatoxidans (isolates:1; rSTs:1)
        • Pusillimonas (isolates:8; rSTs:6 tree)
          • Pusillimonas caeni (isolates:1; rSTs:1)
          • Pusillimonas minor (isolates:1; rSTs:1)
          • Pusillimonas noertemannii (isolates:4; rSTs:2)
          • Pusillimonas sp. (isolates:2; rSTs:2 tree)
        • Sheuella (isolates:1; rSTs:1)
          • Sheuella amnicola (isolates:1; rSTs:1)
        • Taylorella (isolates:51; rSTs:23 tree)
          • Taylorella asinigenitalis (isolates:3; rSTs:3 tree)
          • Taylorella equigenitalis (isolates:48; rSTs:20 tree)
        • Verticiella (isolates:3; rSTs:2)
          • Verticiella sediminum (isolates:2; rSTs:1)
          • Verticiella sp. (isolates:1; rSTs:1)
        • Yanghanlia (isolates:1; rSTs:1)
          • Yanghanlia caeni (isolates:1; rSTs:1)
        • Zwartia (isolates:3; rSTs:3 tree)
          • Zwartia hollandica (isolates:1; rSTs:1)
          • Zwartia panacis (isolates:1; rSTs:1)
          • Zwartia vadi (isolates:1; rSTs:1)
      • Burkholderiaceae (isolates:7040; rSTs:3539)
        • Burkholderia (isolates:5275; rSTs:2397)
          • Burkholderia aenigmatica (isolates:27; rSTs:8 tree)
          • Burkholderia alba (isolates:1; rSTs:1)
          • Burkholderia ambifaria (isolates:99; rSTs:57 tree)
          • Burkholderia anthina (isolates:19; rSTs:16 tree)
          • Burkholderia arboris (isolates:8; rSTs:8 tree)
          • Burkholderia catarinensis (isolates:1; rSTs:1)
          • Burkholderia cenocepacia (isolates:459; rSTs:167 tree)
          • Burkholderia cepacia (isolates:120; rSTs:73 tree)
          • Burkholderia contaminans (isolates:146; rSTs:38 tree)
          • Burkholderia diffusa (isolates:11; rSTs:8 tree)
          • Burkholderia dolosa (isolates:41; rSTs:14 tree)
          • Burkholderia gladioli (isolates:305; rSTs:208 tree)
          • Burkholderia glumae (isolates:70; rSTs:19 tree)
          • Burkholderia guangdongensis (isolates:1; rSTs:1)
          • Burkholderia humptydooensis (isolates:7; rSTs:2)
          • Burkholderia lata (isolates:14; rSTs:13 tree)
          • Burkholderia latens (isolates:9; rSTs:7 tree)
          • Burkholderia mallei (isolates:111; rSTs:15 tree)
          • Burkholderia mayonis (isolates:2; rSTs:2)
          • Burkholderia metallica (isolates:9; rSTs:7 tree)
          • Burkholderia multivorans (isolates:641; rSTs:247 tree)
          • Burkholderia oklahomensis (isolates:12; rSTs:3 tree)
          • Burkholderia orbicola (isolates:36; rSTs:22 tree)
          • Burkholderia paludis (isolates:3; rSTs:2)
          • Burkholderia perseverans (isolates:1; rSTs:1)
          • Burkholderia plantarii (isolates:6; rSTs:4 tree)
          • Burkholderia pseudomallei (isolates:2031; rSTs:622 tree)
          • Burkholderia pseudomultivorans (isolates:23; rSTs:14 tree)
          • Burkholderia puraquae (isolates:2; rSTs:1)
          • Burkholderia pyrrocinia (isolates:20; rSTs:16 tree)
          • Burkholderia reimsis (isolates:1; rSTs:1)
          • Burkholderia savannae (isolates:4; rSTs:4 tree)
          • Burkholderia semiarida (isolates:5; rSTs:4 tree)
          • Burkholderia seminalis (isolates:18; rSTs:15 tree)
          • Burkholderia singularis (isolates:3; rSTs:3 tree)
          • Burkholderia sola (isolates:4; rSTs:4 tree)
          • Burkholderia sp. (isolates:234; rSTs:305 tree)
          • Burkholderia stabilis (isolates:24; rSTs:9 tree)
          • Burkholderia stagnalis (isolates:107; rSTs:30 tree)
          • Burkholderia territorii (isolates:47; rSTs:30 tree)
          • Burkholderia thailandensis (isolates:75; rSTs:33 tree)
          • Burkholderia ubonensis (isolates:312; rSTs:214 tree)
          • Burkholderia vietnamiensis (isolates:201; rSTs:143 tree)
          • Candidatus Burkholderia brachyanthoides (isolates:1; rSTs:1)
          • Candidatus Burkholderia crenata (isolates:1; rSTs:1)
          • Candidatus Burkholderia humilis (isolates:1; rSTs:1)
          • Candidatus Burkholderia pumila (isolates:1; rSTs:1)
          • Candidatus Burkholderia verschuerenii (isolates:1; rSTs:1)
        • Caballeronia (isolates:115; rSTs:99 tree)
          • Caballeronia arationis (isolates:2; rSTs:2)
          • Caballeronia arvi (isolates:1; rSTs:1)
          • Caballeronia calidae (isolates:1; rSTs:1)
          • Caballeronia catudaia (isolates:1; rSTs:1)
          • Caballeronia choica (isolates:1; rSTs:1)
          • Caballeronia concitans (isolates:1; rSTs:1)
          • Caballeronia cordobensis (isolates:2; rSTs:1)
          • Caballeronia fortuita (isolates:1; rSTs:1)
          • Caballeronia glathei (isolates:2; rSTs:1)
          • Caballeronia glebae (isolates:1; rSTs:1)
          • Caballeronia grimmiae (isolates:3; rSTs:2)
          • Caballeronia humi (isolates:1; rSTs:1)
          • Caballeronia hypogeia (isolates:1; rSTs:1)
          • Caballeronia insecticola (isolates:1; rSTs:1)
          • Caballeronia jiangsuensis (isolates:1; rSTs:1)
          • Caballeronia megalochromosomata (isolates:1; rSTs:1)
          • Caballeronia mineralivorans (isolates:1; rSTs:1)
          • Caballeronia novacaledonica (isolates:1; rSTs:1)
          • Caballeronia pedi (isolates:1; rSTs:1)
          • Caballeronia peredens (isolates:1; rSTs:1)
          • Caballeronia ptereochthonis (isolates:1; rSTs:1)
          • Caballeronia sordidicola (isolates:4; rSTs:3 tree)
          • Caballeronia sp. (isolates:69; rSTs:57 tree)
          • Caballeronia telluris (isolates:1; rSTs:1)
          • Caballeronia temeraria (isolates:1; rSTs:1)
          • Caballeronia terrestris (isolates:1; rSTs:1)
          • Caballeronia turbans (isolates:1; rSTs:1)
          • Caballeronia udeis (isolates:6; rSTs:6 tree)
          • Caballeronia zhejiangensis (isolates:6; rSTs:6 tree)
        • Candidatus Glomeribacter (isolates:3; rSTs:1)
          • Candidatus Glomeribacter gigasporarum (isolates:3; rSTs:1)
        • Candidatus Vallotia (isolates:4; rSTs:4 tree)
          • Candidatus Vallotia cooleyia (isolates:1; rSTs:1)
          • Candidatus Vallotia lariciata (isolates:1; rSTs:1)
          • Candidatus Vallotia sp. (isolates:1; rSTs:1)
          • Candidatus Vallotia tarda (isolates:1; rSTs:1)
        • Chitinasiproducens (isolates:1; rSTs:1)
          • Chitinasiproducens palmae (isolates:1; rSTs:1)
        • Cupriavidus (isolates:170; rSTs:140 tree)
          • Cupriavidus agavae (isolates:1; rSTs:1)
          • Cupriavidus alkaliphilus (isolates:8; rSTs:7 tree)
          • Cupriavidus basilensis (isolates:7; rSTs:5 tree)
          • Cupriavidus campinensis (isolates:4; rSTs:3 tree)
          • Cupriavidus cauae (isolates:2; rSTs:2)
          • Cupriavidus gilardii (isolates:15; rSTs:8 tree)
          • Cupriavidus lacunae (isolates:1; rSTs:1)
          • Cupriavidus laharis (isolates:1; rSTs:1)
          • Cupriavidus malaysiensis (isolates:1; rSTs:1)
          • Cupriavidus metallidurans (isolates:16; rSTs:9 tree)
          • Cupriavidus nantongensis (isolates:2; rSTs:2)
          • Cupriavidus necator (isolates:15; rSTs:8 tree)
          • Cupriavidus neocaledonicus (isolates:3; rSTs:2)
          • Cupriavidus numazuensis (isolates:1; rSTs:1)
          • Cupriavidus oxalaticus (isolates:8; rSTs:4 tree)
          • Cupriavidus pampae (isolates:1; rSTs:1)
          • Cupriavidus pauculus (isolates:8; rSTs:4 tree)
          • Cupriavidus pinatubonensis (isolates:4; rSTs:4 tree)
          • Cupriavidus plantarum (isolates:9; rSTs:6 tree)
          • Cupriavidus respiraculi (isolates:2; rSTs:2)
          • Cupriavidus sp. (isolates:51; rSTs:63 tree)
          • Cupriavidus taiwanensis (isolates:9; rSTs:4 tree)
          • Cupriavidus yeoncheonensis (isolates:1; rSTs:1)
        • Ephemeroptericola (isolates:1; rSTs:1)
          • Ephemeroptericola cinctiostellae (isolates:1; rSTs:1)
        • Formosimonas (isolates:1; rSTs:1)
          • Formosimonas limnophila (isolates:1; rSTs:1)
        • Hydromonas (isolates:1; rSTs:1)
          • Hydromonas duriensis (isolates:1; rSTs:1)
        • Lautropia (isolates:5; rSTs:3 tree)
          • Lautropia dentalis (isolates:1; rSTs:1)
          • Lautropia mirabilis (isolates:4; rSTs:2)
        • Limnobacter (isolates:12; rSTs:10 tree)
          • Limnobacter alexandrii (isolates:1; rSTs:1)
          • Limnobacter humi (isolates:1; rSTs:1)
          • Limnobacter litoralis (isolates:1; rSTs:1)
          • Limnobacter parvus (isolates:1; rSTs:1)
          • Limnobacter sp. (isolates:6; rSTs:5 tree)
          • Limnobacter thiooxidans (isolates:2; rSTs:1)
        • Mycetohabitans (isolates:18; rSTs:12 tree)
          • Mycetohabitans endofungorum (isolates:7; rSTs:6 tree)
          • Mycetohabitans rhizoxinica (isolates:4; rSTs:4 tree)
          • Mycetohabitans sp. (isolates:7; rSTs:2 tree)
        • Mycoavidus (isolates:5; rSTs:4 tree)
          • Mycoavidus cysteinexigens (isolates:2; rSTs:1)
          • Mycoavidus sp. (isolates:3; rSTs:3 tree)
        • Pandoraea (isolates:96; rSTs:74 tree)
          • Candidatus Pandoraea novymonadis (isolates:1; rSTs:1)
          • Pandoraea anapnoica (isolates:1; rSTs:1)
          • Pandoraea anhela (isolates:1; rSTs:1)
          • Pandoraea apista (isolates:23; rSTs:14 tree)
          • Pandoraea aquatica (isolates:1; rSTs:1)
          • Pandoraea bronchicola (isolates:1; rSTs:1)
          • Pandoraea capi (isolates:2; rSTs:2)
          • Pandoraea captiosa (isolates:1; rSTs:1)
          • Pandoraea cepalis (isolates:4; rSTs:3 tree)
          • Pandoraea commovens (isolates:2; rSTs:2)
          • Pandoraea communis (isolates:3; rSTs:3 tree)
          • Pandoraea eparura (isolates:1; rSTs:1)
          • Pandoraea faecigallinarum (isolates:1; rSTs:1)
          • Pandoraea fibrosis (isolates:3; rSTs:2)
          • Pandoraea horticolens (isolates:1; rSTs:1)
          • Pandoraea iniqua (isolates:2; rSTs:2)
          • Pandoraea morbifera (isolates:1; rSTs:1)
          • Pandoraea norimbergensis (isolates:1; rSTs:1)
          • Pandoraea nosoerga (isolates:4; rSTs:3 tree)
          • Pandoraea oxalativorans (isolates:1; rSTs:1)
          • Pandoraea pneumonica (isolates:1; rSTs:1)
          • Pandoraea pnomenusa (isolates:10; rSTs:8 tree)
          • Pandoraea pulmonicola (isolates:2; rSTs:1)
          • Pandoraea soli (isolates:1; rSTs:1)
          • Pandoraea sp. (isolates:11; rSTs:8 tree)
          • Pandoraea sputorum (isolates:11; rSTs:8 tree)
          • Pandoraea terrae (isolates:1; rSTs:1)
          • Pandoraea terrigena (isolates:1; rSTs:1)
          • Pandoraea thiooxydans (isolates:2; rSTs:1)
          • Pandoraea vervacti (isolates:1; rSTs:1)
        • Paraburkholderia (isolates:407; rSTs:320 tree)
          • Candidatus Paraburkholderia calva (isolates:1; rSTs:1)
          • Candidatus Paraburkholderia kirkii (isolates:1; rSTs:1)
          • Paraburkholderia acidicola (isolates:2; rSTs:2)
          • Paraburkholderia acidipaludis (isolates:1; rSTs:1)
          • Paraburkholderia acidiphila (isolates:1; rSTs:1)
          • Paraburkholderia acidisoli (isolates:1; rSTs:1)
          • Paraburkholderia adhaesiva (isolates:1; rSTs:1)
          • Paraburkholderia agricolaris (isolates:1; rSTs:1)
          • Paraburkholderia antibiotica (isolates:1; rSTs:1)
          • Paraburkholderia aromaticivorans (isolates:1; rSTs:1)
          • Paraburkholderia aspalathi (isolates:13; rSTs:7 tree)
          • Paraburkholderia atlantica (isolates:7; rSTs:7 tree)
          • Paraburkholderia azotifigens (isolates:4; rSTs:3 tree)
          • Paraburkholderia bannensis (isolates:9; rSTs:8 tree)
          • Paraburkholderia bengalensis (isolates:1; rSTs:1)
          • Paraburkholderia bonniea (isolates:3; rSTs:2)
          • Paraburkholderia bryophila (isolates:6; rSTs:4 tree)
          • Paraburkholderia caballeronis (isolates:9; rSTs:3 tree)
          • Paraburkholderia caffeinilytica (isolates:3; rSTs:1)
          • Paraburkholderia caffeinitolerans (isolates:1; rSTs:1)
          • Paraburkholderia caledonica (isolates:3; rSTs:2)
          • Paraburkholderia caribensis (isolates:14; rSTs:8 tree)
          • Paraburkholderia diazotrophica (isolates:2; rSTs:2)
          • Paraburkholderia dilworthii (isolates:1; rSTs:1)
          • Paraburkholderia dinghuensis (isolates:1; rSTs:1)
          • Paraburkholderia dioscoreae (isolates:1; rSTs:1)
          • Paraburkholderia dipogonis (isolates:1; rSTs:1)
          • Paraburkholderia domus (isolates:7; rSTs:5 tree)
          • Paraburkholderia eburnea (isolates:2; rSTs:1)
          • Paraburkholderia edwinii (isolates:1; rSTs:1)
          • Paraburkholderia elongata (isolates:1; rSTs:1)
          • Paraburkholderia ferrariae (isolates:1; rSTs:1)
          • Paraburkholderia flagellata (isolates:1; rSTs:1)
          • Paraburkholderia flava (isolates:1; rSTs:1)
          • Paraburkholderia franconis (isolates:1; rSTs:1)
          • Paraburkholderia fungorum (isolates:15; rSTs:10 tree)
          • Paraburkholderia fynbosensis (isolates:1; rSTs:1)
          • Paraburkholderia gardini (isolates:2; rSTs:2)
          • Paraburkholderia ginsengisoli (isolates:2; rSTs:1)
          • Paraburkholderia ginsengiterrae (isolates:2; rSTs:2)
          • Paraburkholderia graminis (isolates:8; rSTs:6 tree)
          • Paraburkholderia guartelaensis (isolates:2; rSTs:2)
          • Paraburkholderia haematera (isolates:1; rSTs:1)
          • Paraburkholderia hayleyella (isolates:1; rSTs:1)
          • Paraburkholderia heleia (isolates:2; rSTs:2)
          • Paraburkholderia hiiakae (isolates:1; rSTs:1)
          • Paraburkholderia hospita (isolates:10; rSTs:7 tree)
          • Paraburkholderia humisilvae (isolates:1; rSTs:1)
          • Paraburkholderia kirstenboschensis (isolates:4; rSTs:3 tree)
          • Paraburkholderia kururiensis (isolates:8; rSTs:4 tree)
          • Paraburkholderia lacunae (isolates:1; rSTs:1)
          • Paraburkholderia largidicola (isolates:1; rSTs:1)
          • Paraburkholderia lycopersici (isolates:1; rSTs:1)
          • Paraburkholderia madseniana (isolates:6; rSTs:4 tree)
          • Paraburkholderia megapolitana (isolates:4; rSTs:2)
          • Paraburkholderia metrosideri (isolates:1; rSTs:1)
          • Paraburkholderia mimosarum (isolates:4; rSTs:2)
          • Paraburkholderia monticola (isolates:1; rSTs:1)
          • Paraburkholderia nemoris (isolates:6; rSTs:6 tree)
          • Paraburkholderia nodosa (isolates:1; rSTs:1)
          • Paraburkholderia oxyphila (isolates:1; rSTs:1)
          • Paraburkholderia pallida (isolates:1; rSTs:1)
          • Paraburkholderia panacisoli (isolates:1; rSTs:1)
          • Paraburkholderia phenazinium (isolates:8; rSTs:6 tree)
          • Paraburkholderia phenoliruptrix (isolates:11; rSTs:7 tree)
          • Paraburkholderia phosphatilytica (isolates:1; rSTs:1)
          • Paraburkholderia phymatum (isolates:3; rSTs:1)
          • Paraburkholderia phytofirmans (isolates:1; rSTs:1)
          • Paraburkholderia piptadeniae (isolates:1; rSTs:1)
          • Paraburkholderia podalyriae (isolates:1; rSTs:1)
          • Paraburkholderia polaris (isolates:1; rSTs:1)
          • Paraburkholderia rhizosphaerae (isolates:1; rSTs:1)
          • Paraburkholderia rhynchosiae (isolates:2; rSTs:1)
          • Paraburkholderia ribeironis (isolates:1; rSTs:1)
          • Paraburkholderia sabiae (isolates:4; rSTs:2)
          • Paraburkholderia sacchari (isolates:3; rSTs:2)
          • Paraburkholderia saeva (isolates:3; rSTs:3 tree)
          • Paraburkholderia sartisoli (isolates:1; rSTs:1)
          • Paraburkholderia sediminicola (isolates:1; rSTs:1)
          • Paraburkholderia sejongensis (isolates:1; rSTs:1)
          • Paraburkholderia silvatlantica (isolates:5; rSTs:3 tree)
          • Paraburkholderia silviterrae (isolates:1; rSTs:1)
          • Paraburkholderia solisilvae (isolates:1; rSTs:1)
          • Paraburkholderia solitsugae (isolates:1; rSTs:1)
          • Paraburkholderia sp. (isolates:86; rSTs:83 tree)
          • Paraburkholderia sprentiae (isolates:1; rSTs:1)
          • Paraburkholderia steynii (isolates:1; rSTs:1)
          • Paraburkholderia strydomiana (isolates:3; rSTs:3 tree)
          • Paraburkholderia susongensis (isolates:1; rSTs:1)
          • Paraburkholderia tagetis (isolates:1; rSTs:1)
          • Paraburkholderia terrae (isolates:6; rSTs:5 tree)
          • Paraburkholderia terricola (isolates:8; rSTs:7 tree)
          • Paraburkholderia translucens (isolates:1; rSTs:1)
          • Paraburkholderia tropica (isolates:38; rSTs:23 tree)
          • Paraburkholderia tuberum (isolates:3; rSTs:2)
          • Paraburkholderia ultramafica (isolates:1; rSTs:1)
          • Paraburkholderia unamae (isolates:3; rSTs:3 tree)
          • Paraburkholderia xenovorans (isolates:3; rSTs:2)
          • Paraburkholderia youngii (isolates:5; rSTs:5 tree)
        • Pararobbsia (isolates:2; rSTs:2)
          • Pararobbsia alpina (isolates:1; rSTs:1)
          • Pararobbsia silviterrae (isolates:1; rSTs:1)
        • Paucimonas (isolates:1; rSTs:1)
          • Paucimonas lemoignei (isolates:1; rSTs:1)
        • Polynucleobacter (isolates:256; rSTs:226 tree)
          • Polynucleobacter acidiphobus (isolates:1; rSTs:1)
          • Polynucleobacter aenigmaticus (isolates:1; rSTs:1)
          • Polynucleobacter alcilacus (isolates:1; rSTs:1)
          • Polynucleobacter antarcticus (isolates:1; rSTs:1)
          • Polynucleobacter arcticus (isolates:1; rSTs:1)
          • Polynucleobacter asymbioticus (isolates:9; rSTs:6 tree)
          • Polynucleobacter bastaniensis (isolates:1; rSTs:1)
          • Polynucleobacter brandtiae (isolates:1; rSTs:1)
          • Polynucleobacter campilacus (isolates:1; rSTs:1)
          • Polynucleobacter corsicus (isolates:1; rSTs:1)
          • Polynucleobacter cosmopolitanus (isolates:1; rSTs:1)
          • Polynucleobacter difficilis (isolates:1; rSTs:1)
          • Polynucleobacter duraquae (isolates:1; rSTs:1)
          • Polynucleobacter finlandensis (isolates:1; rSTs:1)
          • Polynucleobacter hallstattensis (isolates:1; rSTs:1)
          • Polynucleobacter hirudinilacicola (isolates:1; rSTs:1)
          • Polynucleobacter ibericus (isolates:1; rSTs:1)
          • Polynucleobacter kasalickyi (isolates:1; rSTs:1)
          • Polynucleobacter meluiroseus (isolates:1; rSTs:1)
          • Polynucleobacter necessarius (isolates:1; rSTs:1)
          • Polynucleobacter nymphae (isolates:1; rSTs:1)
          • Polynucleobacter paludilacus (isolates:1; rSTs:1)
          • Polynucleobacter paneuropaeus (isolates:113; rSTs:86 tree)
          • Polynucleobacter parvulilacunae (isolates:1; rSTs:1)
          • Polynucleobacter rarus (isolates:1; rSTs:1)
          • Polynucleobacter sinensis (isolates:1; rSTs:1)
          • Polynucleobacter sp. (isolates:92; rSTs:93 tree)
          • Polynucleobacter sphagniphilus (isolates:11; rSTs:10 tree)
          • Polynucleobacter tropicus (isolates:1; rSTs:1)
          • Polynucleobacter victoriensis (isolates:1; rSTs:1)
          • Polynucleobacter wuianus (isolates:2; rSTs:2)
          • Polynucleobacter yangtzensis (isolates:3; rSTs:3 tree)
        • Quisquiliibacterium (isolates:2; rSTs:1)
          • Quisquiliibacterium transsilvanicum (isolates:2; rSTs:1)
        • Ralstonia (isolates:632; rSTs:221 tree)
          • Ralstonia chuxiongensis (isolates:2; rSTs:2)
          • Ralstonia condita (isolates:1; rSTs:1)
          • Ralstonia edaphis (isolates:3; rSTs:3 tree)
          • Ralstonia flaminis (isolates:1; rSTs:1)
          • Ralstonia holmesii (isolates:3; rSTs:2)
          • Ralstonia insidiosa (isolates:21; rSTs:7 tree)
          • Ralstonia mannitolilytica (isolates:28; rSTs:16 tree)
          • Ralstonia mojiangensis (isolates:5; rSTs:5 tree)
          • Ralstonia pickettii (isolates:64; rSTs:12 tree)
          • Ralstonia psammae (isolates:1; rSTs:1)
          • Ralstonia pseudosolanacearum (isolates:120; rSTs:61 tree)
          • Ralstonia solanacearum (isolates:311; rSTs:66 tree)
          • Ralstonia soli (isolates:1; rSTs:1)
          • Ralstonia sp. (isolates:53; rSTs:29 tree)
          • Ralstonia syzygii (isolates:9; rSTs:5 tree)
          • Ralstonia thomasii (isolates:4; rSTs:4 tree)
          • Ralstonia wenshanensis (isolates:5; rSTs:5 tree)
        • Robbsia (isolates:7; rSTs:5 tree)
          • Robbsia andropogonis (isolates:6; rSTs:4 tree)
          • Robbsia sp. (isolates:1; rSTs:1)
        • Trinickia (isolates:24; rSTs:13 tree)
          • Trinickia acidisoli (isolates:1; rSTs:1)
          • Trinickia caryophylli (isolates:9; rSTs:1)
          • Trinickia dabaoshanensis (isolates:1; rSTs:1)
          • Trinickia diaoshuihuensis (isolates:1; rSTs:1)
          • Trinickia dinghuensis (isolates:1; rSTs:1)
          • Trinickia fusca (isolates:1; rSTs:1)
          • Trinickia mobilis (isolates:1; rSTs:1)
          • Trinickia soli (isolates:2; rSTs:1)
          • Trinickia sp. (isolates:1; rSTs:1)
          • Trinickia symbiotica (isolates:4; rSTs:2)
          • Trinickia terrae (isolates:1; rSTs:1)
          • Trinickia violacea (isolates:1; rSTs:1)
        • Zeimonas (isolates:2; rSTs:2)
          • Zeimonas arvi (isolates:1; rSTs:1)
          • Zeimonas sediminis (isolates:1; rSTs:1)
      • Comamonadaceae (isolates:872; rSTs:682 tree)
        • Acidovorax (isolates:80; rSTs:69 tree)
          • Acidovorax benzenivorans (isolates:1; rSTs:1)
          • Acidovorax carolinensis (isolates:4; rSTs:3 tree)
          • Acidovorax defluvii (isolates:1; rSTs:1)
          • Acidovorax delafieldii (isolates:2; rSTs:1)
          • Acidovorax facilis (isolates:1; rSTs:1)
          • Acidovorax kalamii (isolates:2; rSTs:2)
          • Acidovorax radicis (isolates:2; rSTs:1)
          • Acidovorax soli (isolates:1; rSTs:1)
          • Acidovorax sp. (isolates:61; rSTs:53 tree)
          • Acidovorax temperans (isolates:5; rSTs:5 tree)
        • Albitalea (isolates:1; rSTs:1)
          • Albitalea terrae (isolates:1; rSTs:1)
        • Alicycliphilus (isolates:7; rSTs:7 tree)
          • Alicycliphilus denitrificans (isolates:6; rSTs:6 tree)
          • Alicycliphilus sp. (isolates:1; rSTs:1)
        • Allofranklinella (isolates:3; rSTs:3 tree)
          • Allofranklinella schreckenbergeri (isolates:3; rSTs:3 tree)
        • Brachymonas (isolates:6; rSTs:6 tree)
          • Brachymonas chironomi (isolates:1; rSTs:1)
          • Brachymonas denitrificans (isolates:2; rSTs:2)
          • Brachymonas sp. (isolates:3; rSTs:3 tree)
        • Caenimonas (isolates:5; rSTs:5 tree)
          • Caenimonas aquaedulcis (isolates:1; rSTs:1)
          • Caenimonas koreensis (isolates:1; rSTs:1)
          • Caenimonas sedimenti (isolates:1; rSTs:1)
          • Caenimonas soli (isolates:1; rSTs:1)
          • Caenimonas sp. (isolates:1; rSTs:1)
        • Candidatus Symbiobacter (isolates:1; rSTs:1)
          • Candidatus Symbiobacter mobilis (isolates:1; rSTs:1)
        • Comamonas (isolates:207; rSTs:121 tree)
          • Comamonas antarctica (isolates:1; rSTs:1)
          • Comamonas aquatica (isolates:32; rSTs:22 tree)
          • Comamonas avium (isolates:1; rSTs:1)
          • Comamonas badia (isolates:1; rSTs:1)
          • Comamonas composti (isolates:1; rSTs:1)
          • Comamonas denitrificans (isolates:1; rSTs:1)
          • Comamonas endophytica (isolates:2; rSTs:1)
          • Comamonas flocculans (isolates:1; rSTs:1)
          • Comamonas fluminis (isolates:1; rSTs:1)
          • Comamonas granuli (isolates:1; rSTs:1)
          • Comamonas jiangduensis (isolates:2; rSTs:1)
          • Comamonas kerstersii (isolates:9; rSTs:4 tree)
          • Comamonas koreensis (isolates:2; rSTs:2)
          • Comamonas odontotermitis (isolates:3; rSTs:2)
          • Comamonas phosphati (isolates:1; rSTs:1)
          • Comamonas piscis (isolates:2; rSTs:1)
          • Comamonas resistens (isolates:2; rSTs:1)
          • Comamonas sediminis (isolates:1; rSTs:1)
          • Comamonas serinivorans (isolates:1; rSTs:1)
          • Comamonas sp. (isolates:41; rSTs:38 tree)
          • Comamonas suwonensis (isolates:1; rSTs:1)
          • Comamonas terrae (isolates:1; rSTs:1)
          • Comamonas terrigena (isolates:10; rSTs:6 tree)
          • Comamonas testosteroni (isolates:18; rSTs:11 tree)
          • Comamonas thiooxydans (isolates:71; rSTs:19 tree)
        • Corticibacter (isolates:2; rSTs:1)
          • Corticibacter populi (isolates:2; rSTs:1)
        • Curvibacter (isolates:7; rSTs:6 tree)
          • Curvibacter delicatus (isolates:1; rSTs:1)
          • Curvibacter gracilis (isolates:1; rSTs:1)
          • Curvibacter lanceolatus (isolates:1; rSTs:1)
          • Curvibacter sp. (isolates:4; rSTs:3 tree)
        • Delftia (isolates:77; rSTs:61 tree)
          • Delftia acidovorans (isolates:22; rSTs:18 tree)
          • Delftia lacustris (isolates:4; rSTs:2)
          • Delftia sp. (isolates:28; rSTs:26 tree)
          • Delftia tsuruhatensis (isolates:23; rSTs:15 tree)
        • Diaphorobacter (isolates:16; rSTs:13 tree)
          • Diaphorobacter aerolatus (isolates:1)
          • Diaphorobacter caeni (isolates:1; rSTs:1)
          • Diaphorobacter limosus (isolates:1; rSTs:1)
          • Diaphorobacter nitroreducens (isolates:2; rSTs:1)
          • Diaphorobacter ruginosibacter (isolates:1; rSTs:1)
          • Diaphorobacter sp. (isolates:10; rSTs:9 tree)
        • Extensimonas (isolates:5; rSTs:3 tree)
          • Extensimonas perlucida (isolates:1; rSTs:1)
          • Extensimonas sp. (isolates:1; rSTs:1)
          • Extensimonas vulgaris (isolates:3; rSTs:1)
        • Giesbergeria (isolates:1; rSTs:1)
          • Giesbergeria anulus (isolates:1; rSTs:1)
        • Hydrogenophaga (isolates:38; rSTs:29 tree)
          • Hydrogenophaga aromaticivorans (isolates:2; rSTs:2)
          • Hydrogenophaga borbori (isolates:1; rSTs:1)
          • Hydrogenophaga crassostreae (isolates:2; rSTs:1)
          • Hydrogenophaga crocea (isolates:1; rSTs:1)
          • Hydrogenophaga electricum (isolates:1; rSTs:1)
          • Hydrogenophaga flava (isolates:1; rSTs:1)
          • Hydrogenophaga intermedia (isolates:3; rSTs:1)
          • Hydrogenophaga laconesensis (isolates:2; rSTs:1)
          • Hydrogenophaga palleronii (isolates:1; rSTs:1)
          • Hydrogenophaga pseudoflava (isolates:2; rSTs:2)
          • Hydrogenophaga sp. (isolates:19; rSTs:15 tree)
          • Hydrogenophaga taeniospiralis (isolates:3; rSTs:2)
        • Hylemonella (isolates:3; rSTs:3 tree)
          • Hylemonella gracilis (isolates:3; rSTs:3 tree)
        • Lampropedia (isolates:5; rSTs:5 tree)
          • Lampropedia aestuarii (isolates:2; rSTs:2)
          • Lampropedia cohaerens (isolates:1; rSTs:1)
          • Lampropedia hyalina (isolates:1; rSTs:1)
          • Lampropedia puyangensis (isolates:1; rSTs:1)
        • Limnohabitans (isolates:37; rSTs:34 tree)
          • Limnohabitans curvus (isolates:1; rSTs:1)
          • Limnohabitans lacus (isolates:1; rSTs:1)
          • Limnohabitans parvus (isolates:1; rSTs:1)
          • Limnohabitans planktonicus (isolates:1; rSTs:1)
          • Limnohabitans radicicola (isolates:1; rSTs:1)
          • Limnohabitans sp. (isolates:32; rSTs:29 tree)
        • Macromonas (isolates:2; rSTs:2)
          • Macromonas bipunctata (isolates:1; rSTs:1)
          • Macromonas nakdongensis (isolates:1; rSTs:1)
        • Malikia (isolates:3; rSTs:3 tree)
          • Malikia granosa (isolates:1; rSTs:1)
          • Malikia spinosa (isolates:2; rSTs:2)
        • Melaminivora (isolates:5; rSTs:4 tree)
          • Melaminivora alkalimesophila (isolates:2; rSTs:1)
          • Melaminivora jejuensis (isolates:2; rSTs:2)
          • Melaminivora suipulveris (isolates:1; rSTs:1)
        • Oryzisolibacter (isolates:1; rSTs:1)
          • Oryzisolibacter propanilivorax (isolates:1; rSTs:1)
        • Ottowia (isolates:10; rSTs:9 tree)
          • Ottowia beijingensis (isolates:1)
          • Ottowia cancrivicina (isolates:1; rSTs:1)
          • Ottowia massiliensis (isolates:1; rSTs:1)
          • Ottowia oryzae (isolates:1; rSTs:1)
          • Ottowia sp. (isolates:3; rSTs:3 tree)
          • Ottowia testudinis (isolates:1; rSTs:1)
          • Ottowia thiooxydans (isolates:2; rSTs:2)
        • Paenacidovorax (isolates:3; rSTs:2)
          • Paenacidovorax caeni (isolates:2; rSTs:1)
          • Paenacidovorax monticola (isolates:1; rSTs:1)
        • Paracidovorax (isolates:40; rSTs:22 tree)
          • Paracidovorax anthurii (isolates:1; rSTs:1)
          • Paracidovorax avenae (isolates:8; rSTs:6 tree)
          • Paracidovorax cattleyae (isolates:3; rSTs:2)
          • Paracidovorax citrulli (isolates:22; rSTs:7 tree)
          • Paracidovorax konjaci (isolates:1; rSTs:1)
          • Paracidovorax oryzae (isolates:2; rSTs:2)
          • Paracidovorax valerianellae (isolates:2; rSTs:2)
          • Paracidovorax wautersii (isolates:1; rSTs:1)
        • Polaromonas (isolates:25; rSTs:22 tree)
          • Polaromonas eurypsychrophila (isolates:1; rSTs:1)
          • Polaromonas glacialis (isolates:1; rSTs:1)
          • Polaromonas hydrogenivorans (isolates:1; rSTs:1)
          • Polaromonas jejuensis (isolates:2; rSTs:1)
          • Polaromonas naphthalenivorans (isolates:1; rSTs:1)
          • Polaromonas sp. (isolates:18; rSTs:16 tree)
          • Polaromonas vacuolata (isolates:1; rSTs:1)
        • Pseudacidovorax (isolates:6; rSTs:5 tree)
          • Pseudacidovorax intermedius (isolates:3; rSTs:2)
          • Pseudacidovorax sp. (isolates:3; rSTs:3 tree)
        • Pseudorhodoferax (isolates:5; rSTs:5 tree)
          • Pseudorhodoferax aquiterrae (isolates:1; rSTs:1)
          • Pseudorhodoferax soli (isolates:1; rSTs:1)
          • Pseudorhodoferax sp. (isolates:3; rSTs:3 tree)
        • Pulveribacter (isolates:1; rSTs:1)
          • Pulveribacter suum (isolates:1; rSTs:1)
        • Ramlibacter (isolates:26; rSTs:26 tree)
          • Ramlibacter agri (isolates:1; rSTs:1)
          • Ramlibacter albus (isolates:1; rSTs:1)
          • Ramlibacter algicola (isolates:1; rSTs:1)
          • Ramlibacter alkalitolerans (isolates:1; rSTs:1)
          • Ramlibacter aquaticus (isolates:1; rSTs:1)
          • Ramlibacter aurantiacus (isolates:1; rSTs:1)
          • Ramlibacter cellulosilyticus (isolates:1; rSTs:1)
          • Ramlibacter ginsenosidimutans (isolates:1; rSTs:1)
          • Ramlibacter henchirensis (isolates:1; rSTs:1)
          • Ramlibacter humi (isolates:1; rSTs:1)
          • Ramlibacter lithotrophicus (isolates:1; rSTs:1)
          • Ramlibacter montanisoli (isolates:1; rSTs:1)
          • Ramlibacter monticola (isolates:1; rSTs:1)
          • Ramlibacter pallidus (isolates:1; rSTs:1)
          • Ramlibacter paludis (isolates:1; rSTs:1)
          • Ramlibacter pinisoli (isolates:1; rSTs:1)
          • Ramlibacter rhizophilus (isolates:1; rSTs:1)
          • Ramlibacter sp. (isolates:8; rSTs:8 tree)
          • Ramlibacter tataouinensis (isolates:1; rSTs:1)
        • Rhodoferax (isolates:30; rSTs:28 tree)
          • Rhodoferax antarcticus (isolates:3; rSTs:3 tree)
          • Rhodoferax aquaticus (isolates:1; rSTs:1)
          • Rhodoferax bucti (isolates:1; rSTs:1)
          • Rhodoferax fermentans (isolates:2; rSTs:1)
          • Rhodoferax ferrireducens (isolates:3; rSTs:3 tree)
          • Rhodoferax koreense (isolates:1; rSTs:1)
          • Rhodoferax lacus (isolates:1; rSTs:1)
          • Rhodoferax lithotrophicus (isolates:1; rSTs:1)
          • Rhodoferax mekongensis (isolates:2; rSTs:2)
          • Rhodoferax potami (isolates:2; rSTs:2)
          • Rhodoferax saidenbachensis (isolates:2; rSTs:1)
          • Rhodoferax sediminis (isolates:1; rSTs:1)
          • Rhodoferax sp. (isolates:10; rSTs:10 tree)
        • Serpentinimonas (isolates:4; rSTs:4 tree)
          • Serpentinimonas barnesii (isolates:1; rSTs:1)
          • Serpentinimonas maccroryi (isolates:2; rSTs:2)
          • Serpentinimonas raichei (isolates:1; rSTs:1)
        • Simplicispira (isolates:9; rSTs:7 tree)
          • Simplicispira hankyongi (isolates:1; rSTs:1)
          • Simplicispira lacusdiani (isolates:1; rSTs:1)
          • Simplicispira metamorpha (isolates:2; rSTs:1)
          • Simplicispira psychrophila (isolates:1; rSTs:1)
          • Simplicispira sedimenti (isolates:1; rSTs:1)
          • Simplicispira sp. (isolates:2; rSTs:1)
          • Simplicispira suum (isolates:1; rSTs:1)
        • Tibeticola (isolates:1; rSTs:1)
          • Tibeticola sediminis (isolates:1; rSTs:1)
        • Vandammella (isolates:10; rSTs:9 tree)
          • Vandammella animalimorsus (isolates:10; rSTs:9 tree)
        • Variovorax (isolates:163; rSTs:146 tree)
          • Variovorax beijingensis (isolates:3; rSTs:3 tree)
          • Variovorax boronicumulans (isolates:14; rSTs:12 tree)
          • Variovorax defluvii (isolates:1; rSTs:1)
          • Variovorax dokdonensis (isolates:1; rSTs:1)
          • Variovorax ginsengisoli (isolates:1; rSTs:1)
          • Variovorax gossypii (isolates:1)
          • Variovorax guangxiensis (isolates:2; rSTs:2)
          • Variovorax humicola (isolates:1; rSTs:1)
          • Variovorax paradoxus (isolates:10; rSTs:9 tree)
          • Variovorax rhizosphaerae (isolates:1; rSTs:1)
          • Variovorax robiniae (isolates:1; rSTs:1)
          • Variovorax soli (isolates:1; rSTs:1)
          • Variovorax sp. (isolates:125; rSTs:112 tree)
          • Variovorax ureilyticus (isolates:1; rSTs:1)
        • Verminephrobacter (isolates:23; rSTs:12 tree)
          • Verminephrobacter aporrectodeae (isolates:11; rSTs:8 tree)
          • Verminephrobacter eiseniae (isolates:12; rSTs:4 tree)
        • Xenophilus (isolates:4; rSTs:4 tree)
          • Xenophilus arseniciresistens (isolates:1; rSTs:1)
          • Xenophilus azovorans (isolates:1; rSTs:1)
          • Xenophilus sp. (isolates:2; rSTs:2)
      • Oxalobacteraceae (isolates:524; rSTs:427 tree)
        • Actimicrobium (isolates:6; rSTs:5 tree)
          • Actimicrobium antarcticum (isolates:1; rSTs:1)
          • Actimicrobium sp. (isolates:5; rSTs:4 tree)
        • Candidatus Zinderia (isolates:1)
          • Candidatus Zinderia endosymbiont of Aphrophora alni (isolates:1)
        • Collimonas (isolates:18; rSTs:19 tree)
          • Collimonas antrihumi (isolates:1; rSTs:1)
          • Collimonas arenae (isolates:2; rSTs:1)
          • Collimonas fungivorans (isolates:3; rSTs:3 tree)
          • Collimonas humicola (isolates:2; rSTs:2)
          • Collimonas pratensis (isolates:3; rSTs:3 tree)
          • Collimonas silvisoli (isolates:1; rSTs:1)
          • Collimonas sp. (isolates:6; rSTs:8 tree)
        • Duganella (isolates:57; rSTs:40 tree)
          • Duganella aceris (isolates:1; rSTs:1)
          • Duganella alba (isolates:2; rSTs:1)
          • Duganella aquatilis (isolates:1; rSTs:1)
          • Duganella callida (isolates:1; rSTs:1)
          • Duganella dendranthematis (isolates:1; rSTs:1)
          • Duganella fentianensis (isolates:1; rSTs:1)
          • Duganella flavida (isolates:1; rSTs:1)
          • Duganella guangzhouensis (isolates:1; rSTs:1)
          • Duganella lactea (isolates:2; rSTs:2)
          • Duganella levis (isolates:1; rSTs:1)
          • Duganella margarita (isolates:2; rSTs:2)
          • Duganella phyllosphaerae (isolates:1; rSTs:1)
          • Duganella qianjiadongensis (isolates:1; rSTs:1)
          • Duganella radicis (isolates:1; rSTs:1)
          • Duganella rivi (isolates:1; rSTs:1)
          • Duganella sacchari (isolates:1; rSTs:1)
          • Duganella sp. (isolates:31; rSTs:17 tree)
          • Duganella violaceicalia (isolates:2; rSTs:1)
          • Duganella vulcania (isolates:3; rSTs:3 tree)
          • Duganella zoogloeoides (isolates:2; rSTs:1)
        • Glaciimonas (isolates:9; rSTs:6 tree)
          • Glaciimonas immobilis (isolates:2; rSTs:1)
          • Glaciimonas soli (isolates:1; rSTs:1)
          • Glaciimonas sp. (isolates:6; rSTs:4 tree)
        • Herbaspirillum (isolates:90; rSTs:64 tree)
          • Herbaspirillum aquaticum (isolates:2; rSTs:2)
          • Herbaspirillum autotrophicum (isolates:1; rSTs:1)
          • Herbaspirillum camelliae (isolates:1; rSTs:1)
          • Herbaspirillum chlorophenolicum (isolates:2; rSTs:1)
          • Herbaspirillum frisingense (isolates:4; rSTs:4 tree)
          • Herbaspirillum hiltneri (isolates:2; rSTs:2)
          • Herbaspirillum huttiense (isolates:11; rSTs:9 tree)
          • Herbaspirillum lusitanum (isolates:2; rSTs:2)
          • Herbaspirillum rhizosphaerae (isolates:1; rSTs:1)
          • Herbaspirillum robiniae (isolates:3; rSTs:3 tree)
          • Herbaspirillum rubrisubalbicans (isolates:9; rSTs:3 tree)
          • Herbaspirillum seropedicae (isolates:11; rSTs:6 tree)
          • Herbaspirillum sp. (isolates:41; rSTs:29 tree)
        • Herminiimonas (isolates:7; rSTs:5 tree)
          • Herminiimonas arsenicoxydans (isolates:1; rSTs:1)
          • Herminiimonas arsenitoxidans (isolates:1; rSTs:1)
          • Herminiimonas contaminans (isolates:1; rSTs:1)
          • Herminiimonas fonticola (isolates:2; rSTs:1)
          • Herminiimonas sp. (isolates:2; rSTs:1)
        • Janthinobacterium (isolates:108; rSTs:92 tree)
          • Janthinobacterium agaricidamnosum (isolates:2; rSTs:1)
          • Janthinobacterium kumbetense (isolates:1; rSTs:1)
          • Janthinobacterium lividum (isolates:14; rSTs:8 tree)
          • Janthinobacterium psychrotolerans (isolates:1; rSTs:1)
          • Janthinobacterium rivuli (isolates:1; rSTs:1)
          • Janthinobacterium sp. (isolates:85; rSTs:76 tree)
          • Janthinobacterium svalbardensis (isolates:1; rSTs:1)
          • Janthinobacterium tructae (isolates:2; rSTs:2)
          • Janthinobacterium violaceinigrum (isolates:1; rSTs:1)
        • Keguizhuia (isolates:1)
          • Keguizhuia sedimenti (isolates:1)
        • Lacisediminimonas (isolates:1; rSTs:1)
          • Lacisediminimonas profundi (isolates:1; rSTs:1)
        • Massilia (isolates:95; rSTs:89 tree)
          • Massilia agilis (isolates:1; rSTs:1)
          • Massilia agri (isolates:1; rSTs:1)
          • Massilia agrisoli (isolates:1; rSTs:1)
          • Massilia alkalitolerans (isolates:1; rSTs:1)
          • Massilia antarctica (isolates:2; rSTs:2)
          • Massilia aquatica (isolates:1)
          • Massilia arenae (isolates:1; rSTs:1)
          • Massilia arenosa (isolates:1; rSTs:1)
          • Massilia atriviolacea (isolates:1; rSTs:1)
          • Massilia aurea (isolates:4; rSTs:3 tree)
          • Massilia brevitalea (isolates:1; rSTs:1)
          • Massilia cavernae (isolates:1; rSTs:1)
          • Massilia eburnea (isolates:1; rSTs:1)
          • Massilia endophytica (isolates:1; rSTs:1)
          • Massilia eurypsychrophila (isolates:1; rSTs:1)
          • Massilia forsythiae (isolates:1; rSTs:1)
          • Massilia frigida (isolates:1; rSTs:1)
          • Massilia genomosp. 1 (isolates:1; rSTs:1)
          • Massilia glaciei (isolates:1; rSTs:1)
          • Massilia horti (isolates:1; rSTs:1)
          • Massilia litorea (isolates:1; rSTs:1)
          • Massilia luteola (isolates:1; rSTs:1)
          • Massilia mucilaginosa (isolates:1; rSTs:1)
          • Massilia niastensis (isolates:1; rSTs:1)
          • Massilia norwichensis (isolates:1; rSTs:1)
          • Massilia oculi (isolates:2; rSTs:2)
          • Massilia phyllostachyos (isolates:1; rSTs:1)
          • Massilia pinisoli (isolates:1; rSTs:1)
          • Massilia polaris (isolates:1; rSTs:1)
          • Massilia psychrophila (isolates:2; rSTs:1)
          • Massilia puerhi (isolates:1)
          • Massilia putida (isolates:1; rSTs:1)
          • Massilia rhizosphaerae (isolates:1; rSTs:1)
          • Massilia rubra (isolates:1; rSTs:1)
          • Massilia soli (isolates:1; rSTs:1)
          • Massilia solisilvae (isolates:1; rSTs:1)
          • Massilia sp. (isolates:44; rSTs:42 tree)
          • Massilia terrae (isolates:1; rSTs:1)
          • Massilia timonae (isolates:3; rSTs:3 tree)
          • Massilia varians (isolates:3; rSTs:3 tree)
          • Massilia violaceinigra (isolates:1; rSTs:1)
          • Massilia yuzhufengensis (isolates:1; rSTs:1)
        • Noviherbaspirillum (isolates:19; rSTs:18 tree)
          • Noviherbaspirillum aerium (isolates:1; rSTs:1)
          • Noviherbaspirillum album (isolates:1; rSTs:1)
          • Noviherbaspirillum aridicola (isolates:1; rSTs:1)
          • Noviherbaspirillum autotrophicum (isolates:1; rSTs:1)
          • Noviherbaspirillum cavernae (isolates:1; rSTs:1)
          • Noviherbaspirillum denitrificans (isolates:1; rSTs:1)
          • Noviherbaspirillum galbum (isolates:1; rSTs:1)
          • Noviherbaspirillum humi (isolates:1; rSTs:1)
          • Noviherbaspirillum malthae (isolates:1; rSTs:1)
          • Noviherbaspirillum massiliense (isolates:2; rSTs:1)
          • Noviherbaspirillum pedocola (isolates:1; rSTs:1)
          • Noviherbaspirillum saxi (isolates:1; rSTs:1)
          • Noviherbaspirillum sedimenti (isolates:1; rSTs:1)
          • Noviherbaspirillum soli (isolates:1; rSTs:1)
          • Noviherbaspirillum sp. (isolates:3; rSTs:3 tree)
          • Noviherbaspirillum suwonense (isolates:1; rSTs:1)
        • Oxalicibacterium (isolates:3; rSTs:3 tree)
          • Oxalicibacterium faecigallinarum (isolates:1; rSTs:1)
          • Oxalicibacterium flavum (isolates:1; rSTs:1)
          • Oxalicibacterium solurbis (isolates:1; rSTs:1)
        • Oxalobacter (isolates:20; rSTs:12 tree)
          • Oxalobacter aliiformigenes (isolates:7; rSTs:4 tree)
          • Oxalobacter formigenes (isolates:9; rSTs:5 tree)
          • Oxalobacter paeniformigenes (isolates:1; rSTs:1)
          • Oxalobacter paraformigenes (isolates:2; rSTs:1)
          • Oxalobacter vibrioformis (isolates:1; rSTs:1)
        • Pseudoduganella (isolates:27; rSTs:21 tree)
          • Pseudoduganella albidiflava (isolates:2; rSTs:1)
          • Pseudoduganella aquatica (isolates:2; rSTs:2)
          • Pseudoduganella armeniaca (isolates:1; rSTs:1)
          • Pseudoduganella buxea (isolates:2; rSTs:1)
          • Pseudoduganella chitinolytica (isolates:1; rSTs:1)
          • Pseudoduganella danionis (isolates:1; rSTs:1)
          • Pseudoduganella dura (isolates:2; rSTs:1)
          • Pseudoduganella flava (isolates:2; rSTs:1)
          • Pseudoduganella ginsengisoli (isolates:1; rSTs:1)
          • Pseudoduganella guangdongensis (isolates:1; rSTs:1)
          • Pseudoduganella lurida (isolates:1; rSTs:1)
          • Pseudoduganella lutea (isolates:1; rSTs:1)
          • Pseudoduganella namucuonensis (isolates:1; rSTs:1)
          • Pseudoduganella plicata (isolates:2; rSTs:1)
          • Pseudoduganella rivuli (isolates:1; rSTs:1)
          • Pseudoduganella sp. (isolates:2; rSTs:2)
          • Pseudoduganella umbonata (isolates:2; rSTs:1)
          • Pseudoduganella violacea (isolates:1; rSTs:1)
          • Pseudoduganella violaceinigra (isolates:1; rSTs:1)
        • Rugamonas (isolates:8; rSTs:8 tree)
          • Rugamonas apoptosis (isolates:1; rSTs:1)
          • Rugamonas aquatica (isolates:1; rSTs:1)
          • Rugamonas brunnea (isolates:1; rSTs:1)
          • Rugamonas fusca (isolates:1; rSTs:1)
          • Rugamonas rivuli (isolates:1; rSTs:1)
          • Rugamonas rubra (isolates:1; rSTs:1)
          • Rugamonas sp. (isolates:2; rSTs:2 tree)
        • Sapientia (isolates:1; rSTs:1)
          • Sapientia aquatica (isolates:1; rSTs:1)
        • Solimicrobium (isolates:1; rSTs:1)
          • Solimicrobium silvestre (isolates:1; rSTs:1)
        • Telluria (isolates:7; rSTs:5 tree)
          • Telluria antibiotica (isolates:1; rSTs:1)
          • Telluria aromaticivorans (isolates:1; rSTs:1)
          • Telluria beijingensis (isolates:2; rSTs:1)
          • Telluria cellulosilytica (isolates:1; rSTs:1)
          • Telluria mixta (isolates:2; rSTs:1)
        • Undibacterium (isolates:45; rSTs:37 tree)
          • Undibacterium amnicola (isolates:1; rSTs:1)
          • Undibacterium aquatile (isolates:1; rSTs:1)
          • Undibacterium baiyunense (isolates:1; rSTs:1)
          • Undibacterium crateris (isolates:1; rSTs:1)
          • Undibacterium curvum (isolates:1; rSTs:1)
          • Undibacterium cyanobacteriorum (isolates:1; rSTs:1)
          • Undibacterium fentianense (isolates:1; rSTs:1)
          • Undibacterium flavidum (isolates:1; rSTs:1)
          • Undibacterium griseum (isolates:1; rSTs:1)
          • Undibacterium hunanense (isolates:1; rSTs:1)
          • Undibacterium jejuense (isolates:1; rSTs:1)
          • Undibacterium luofuense (isolates:1; rSTs:1)
          • Undibacterium macrobrachii (isolates:1; rSTs:1)
          • Undibacterium nitidum (isolates:1; rSTs:1)
          • Undibacterium oligocarboniphilum (isolates:2; rSTs:1)
          • Undibacterium parvum (isolates:1; rSTs:1)
          • Undibacterium pigrum (isolates:1; rSTs:1)
          • Undibacterium rivi (isolates:1; rSTs:1)
          • Undibacterium rugosum (isolates:2; rSTs:2)
          • Undibacterium seohonense (isolates:1; rSTs:1)
          • Undibacterium sp. (isolates:20; rSTs:13 tree)
          • Undibacterium squillarum (isolates:1; rSTs:1)
          • Undibacterium terreum (isolates:1; rSTs:1)
          • Undibacterium umbellatum (isolates:1; rSTs:1)
      • Saeziaceae (isolates:1; rSTs:1)
        • Saezia (isolates:1; rSTs:1)
          • Saezia sanguinis (isolates:1; rSTs:1)
      • Sphaerotilaceae (isolates:170; rSTs:136 tree)
        • Aquariibacter (isolates:1; rSTs:1)
          • Aquariibacter albus (isolates:1; rSTs:1)
        • Aquincola (isolates:4; rSTs:4 tree)
          • Aquincola agrisoli (isolates:1; rSTs:1)
          • Aquincola sp. (isolates:1; rSTs:1)
          • Aquincola tertiaricarbonis (isolates:2; rSTs:2)
        • Azohydromonas (isolates:7; rSTs:6 tree)
          • Azohydromonas aeria (isolates:1; rSTs:1)
          • Azohydromonas australica (isolates:1; rSTs:1)
          • Azohydromonas caseinilytica (isolates:1; rSTs:1)
          • Azohydromonas lata (isolates:2; rSTs:1)
          • Azohydromonas sediminis (isolates:1; rSTs:1)
          • Calidifontimicrobium sp. (isolates:1; rSTs:1)
        • Caldimonas (isolates:14; rSTs:11 tree)
          • Caldimonas brevitalea (isolates:1; rSTs:1)
          • Caldimonas caldifontis (isolates:1; rSTs:1)
          • Caldimonas manganoxidans (isolates:1; rSTs:1)
          • Caldimonas mangrovi (isolates:1; rSTs:1)
          • Caldimonas taiwanensis (isolates:1; rSTs:1)
          • Caldimonas tepidiphila (isolates:1; rSTs:1)
          • Caldimonas thermodepolymerans (isolates:6; rSTs:3 tree)
          • Schlegelella aquatica (isolates:1; rSTs:1)
          • Schlegelella koreensis (isolates:1; rSTs:1)
        • Ideonella (isolates:16; rSTs:13 tree)
          • Ideonella alba (isolates:2; rSTs:2)
          • Ideonella aquatica (isolates:1; rSTs:1)
          • Ideonella azotifigens (isolates:3; rSTs:1)
          • Ideonella benzenivorans (isolates:1; rSTs:1)
          • Ideonella dechloratans (isolates:2; rSTs:2)
          • Ideonella livida (isolates:1; rSTs:1)
          • Ideonella oryzae (isolates:1; rSTs:1)
          • Ideonella paludis (isolates:1; rSTs:1)
          • Ideonella sp. (isolates:4; rSTs:3 tree)
        • Inhella (isolates:5; rSTs:4 tree)
          • Inhella crocodyli (isolates:1; rSTs:1)
          • Inhella gelatinilytica (isolates:1; rSTs:1)
          • Inhella inkyongensis (isolates:2; rSTs:1)
          • Inhella proteolytica (isolates:1; rSTs:1)
        • Leptothrix (isolates:2; rSTs:2 tree)
          • Leptothrix cholodnii (isolates:1; rSTs:1)
          • Leptothrix discophora (isolates:1; rSTs:1)
        • Methylibium (isolates:6; rSTs:4 tree)
          • Methylibium petroleiphilum (isolates:1; rSTs:1)
          • Methylibium rhizosphaerae (isolates:1; rSTs:1)
          • Methylibium sp. (isolates:4; rSTs:2)
        • Piscinibacter (isolates:8; rSTs:6 tree)
          • Piscinibacter aquaticus (isolates:1; rSTs:1)
          • Piscinibacter caeni (isolates:1; rSTs:1)
          • Piscinibacter defluvii (isolates:1; rSTs:1)
          • Piscinibacter gummiphilus (isolates:3; rSTs:1)
          • Piscinibacter sakaiensis (isolates:1; rSTs:1)
          • Piscinibacter sp. (isolates:1; rSTs:1)
        • Roseateles (isolates:75; rSTs:61 tree)
          • Mitsuaria sp. (isolates:9; rSTs:5 tree)
          • Paucibacter aquatile (isolates:2; rSTs:2)
          • Paucibacter sediminis (isolates:1; rSTs:1)
          • Paucibacter sp. (isolates:15; rSTs:11 tree)
          • Pelomonas aquatica (isolates:2; rSTs:2)
          • Pelomonas sp. (isolates:13; rSTs:11 tree)
          • Roseateles agri (isolates:1; rSTs:1)
          • Roseateles albus (isolates:1; rSTs:1)
          • Roseateles amylovorans (isolates:1; rSTs:1)
          • Roseateles aquae (isolates:1; rSTs:1)
          • Roseateles aquatilis (isolates:1; rSTs:1)
          • Roseateles asaccharophilus (isolates:2; rSTs:1)
          • Roseateles caseinilyticus (isolates:1; rSTs:1)
          • Roseateles cellulosilyticus (isolates:1; rSTs:1)
          • Roseateles chitinivorans (isolates:1; rSTs:1)
          • Roseateles chitosanitabidus (isolates:1; rSTs:1)
          • Roseateles depolymerans (isolates:2; rSTs:1)
          • Roseateles koreensis (isolates:1; rSTs:1)
          • Roseateles noduli (isolates:1; rSTs:1)
          • Roseateles oligotrophus (isolates:1; rSTs:1)
          • Roseateles puraquae (isolates:2; rSTs:1)
          • Roseateles saccharophilus (isolates:2; rSTs:1)
          • Roseateles sp. (isolates:8; rSTs:9 tree)
          • Roseateles subflavus (isolates:1; rSTs:1)
          • Roseateles terrae (isolates:2; rSTs:1)
          • Roseateles toxinivorans (isolates:1; rSTs:1)
          • Roseateles violae (isolates:1; rSTs:1)
        • Rubrivivax (isolates:19; rSTs:14 tree)
          • Rubrivivax albus (isolates:1; rSTs:1)
          • Rubrivivax benzoatilyticus (isolates:4; rSTs:1)
          • Rubrivivax gelatinosus (isolates:7; rSTs:6 tree)
          • Rubrivivax pictus (isolates:1; rSTs:1)
          • Rubrivivax rivuli (isolates:1; rSTs:1)
          • Rubrivivax sp. (isolates:5; rSTs:4 tree)
        • Scleromatobacter (isolates:1; rSTs:1)
          • Scleromatobacter humisilvae (isolates:1; rSTs:1)
        • Sphaerotilus (isolates:12; rSTs:9 tree)
          • Sphaerotilus hippei (isolates:1; rSTs:1)
          • Sphaerotilus microaerophilus (isolates:1; rSTs:1)
          • Sphaerotilus mobilis (isolates:1; rSTs:1)
          • Sphaerotilus montanus (isolates:2; rSTs:1)
          • Sphaerotilus natans (isolates:2; rSTs:1)
          • Sphaerotilus sp. (isolates:1; rSTs:2)
          • Sphaerotilus sulfidivorans (isolates:3; rSTs:1)
          • Sphaerotilus uruguayifluvii (isolates:1; rSTs:1)
      • Sutterellaceae (isolates:68; rSTs:50 tree)
        • Dakarella (isolates:2; rSTs:1)
          • Dakarella massiliensis (isolates:2; rSTs:1)
        • Duodenibacillus (isolates:1; rSTs:1)
          • Duodenibacillus massiliensis (isolates:1; rSTs:1)
        • Mesosutterella (isolates:4; rSTs:4 tree)
          • Mesosutterella faecium (isolates:1; rSTs:1)
          • Mesosutterella multiformis (isolates:2; rSTs:2)
          • Mesosutterella sp. (isolates:1; rSTs:1)
        • Parasutterella (isolates:21; rSTs:11 tree)
          • Parasutterella excrementihominis (isolates:15; rSTs:5 tree)
          • Parasutterella muris (isolates:3; rSTs:3 tree)
          • Parasutterella secunda (isolates:3; rSTs:3 tree)
        • Sutterella (isolates:37; rSTs:31 tree)
          • Sutterella faecalis (isolates:1; rSTs:1)
          • Sutterella massiliensis (isolates:1; rSTs:1)
          • Sutterella megalosphaeroides (isolates:1; rSTs:1)
          • Sutterella parvirubra (isolates:2; rSTs:1)
          • Sutterella seckii (isolates:1; rSTs:1)
          • Sutterella sp. (isolates:1; rSTs:3 tree)
          • Sutterella wadsworthensis (isolates:30; rSTs:23 tree)
        • Turicimonas (isolates:3; rSTs:2)
          • Turicimonas muris (isolates:3; rSTs:2)
    • Ferrovales (isolates:2; rSTs:2)
      • Ferrovaceae (isolates:2; rSTs:2)
        • Ferrovum (isolates:2; rSTs:2)
          • Ferrovum myxofaciens (isolates:2; rSTs:2)
    • Neisseriales (isolates:79335; rSTs:25434)
      • Aquaspirillaceae (isolates:55; rSTs:30 tree)
        • Aquaspirillum (isolates:1; rSTs:1)
          • Aquaspirillum serpens (isolates:1; rSTs:1)
        • Laribacter (isolates:50; rSTs:25 tree)
          • Laribacter hongkongensis (isolates:50; rSTs:25 tree)
        • Microvirgula (isolates:3; rSTs:3 tree)
          • Microvirgula aerodenitrificans (isolates:2; rSTs:2)
          • Microvirgula sp. (isolates:1; rSTs:1)
        • Rivihabitans (isolates:1; rSTs:1)
          • Rivihabitans pingtungensis (isolates:1; rSTs:1)
      • Chitinibacteraceae (isolates:62; rSTs:51 tree)
        • Amantichitinum (isolates:1; rSTs:1)
          • Amantichitinum ursilacus (isolates:1; rSTs:1)
        • Andreprevotia (isolates:3; rSTs:3 tree)
          • Andreprevotia chitinilytica (isolates:1; rSTs:1)
          • Andreprevotia lacus (isolates:1; rSTs:1)
          • Andreprevotia sp. (isolates:1; rSTs:1)
        • Chitinibacter (isolates:6; rSTs:6 tree)
          • Chitinibacter bivalviorum (isolates:1; rSTs:1)
          • Chitinibacter fontanus (isolates:1; rSTs:1)
          • Chitinibacter sp. (isolates:3; rSTs:3 tree)
          • Chitinibacter tainanensis (isolates:1; rSTs:1)
        • Chitinilyticum (isolates:3; rSTs:3 tree)
          • Chitinilyticum aquatile (isolates:1; rSTs:1)
          • Chitinilyticum litopenaei (isolates:1; rSTs:1)
          • Chitinilyticum piscinae (isolates:1; rSTs:1)
        • Chitinimonas (isolates:13; rSTs:9 tree)
          • Chitinimonas arctica (isolates:1; rSTs:1)
          • Chitinimonas koreensis (isolates:3; rSTs:1)
          • Chitinimonas prasina (isolates:1; rSTs:1)
          • Chitinimonas sp. (isolates:4; rSTs:3 tree)
          • Chitinimonas taiwanensis (isolates:3; rSTs:2)
          • Chitinimonas viridis (isolates:1; rSTs:1)
        • Chitiniphilus (isolates:5; rSTs:4 tree)
          • Chitiniphilus eburneus (isolates:1; rSTs:1)
          • Chitiniphilus purpureus (isolates:1; rSTs:1)
          • Chitiniphilus shinanonensis (isolates:3; rSTs:2)
        • Chitinolyticbacter (isolates:2; rSTs:2)
          • Chitinolyticbacter albus (isolates:1; rSTs:1)
          • Chitinolyticbacter meiyuanensis (isolates:1; rSTs:1)
        • Deefgea (isolates:8; rSTs:7 tree)
          • Deefgea chitinilytica (isolates:1; rSTs:1)
          • Deefgea piscis (isolates:2; rSTs:2)
          • Deefgea rivuli (isolates:1; rSTs:1)
          • Deefgea salmonis (isolates:1; rSTs:1)
          • Deefgea sp. (isolates:2; rSTs:1)
          • Deefgea tanakiae (isolates:1; rSTs:1)
        • Formivibrio (isolates:1; rSTs:1)
          • Formivibrio citricus (isolates:1; rSTs:1)
        • Iodobacter (isolates:11; rSTs:6 tree)
          • Iodobacter ciconiae (isolates:1; rSTs:1)
          • Iodobacter fluviatilis (isolates:5; rSTs:2)
          • Iodobacter sp. (isolates:4; rSTs:2)
          • Iodobacter violacea (isolates:1; rSTs:1)
        • Jeongeupia (isolates:4; rSTs:4 tree)
          • Jeongeupia chitinilytica (isolates:1; rSTs:1)
          • Jeongeupia naejangsanensis (isolates:1; rSTs:1)
          • Jeongeupia sp. (isolates:2; rSTs:2)
        • Parachitinimonas (isolates:1; rSTs:1)
          • Parachitinimonas caeni (isolates:1; rSTs:1)
        • Silvimonas (isolates:4; rSTs:4 tree)
          • Silvimonas amylolytica (isolates:1; rSTs:1)
          • Silvimonas iriomotensis (isolates:1; rSTs:1)
          • Silvimonas soli (isolates:1; rSTs:1)
          • Silvimonas terrae (isolates:1; rSTs:1)
      • Chromobacteriaceae (isolates:139; rSTs:119 tree)
        • Aquitalea (isolates:15; rSTs:11 tree)
          • Aquitalea aquatilis (isolates:1; rSTs:1)
          • Aquitalea denitrificans (isolates:1; rSTs:1)
          • Aquitalea magnusonii (isolates:2; rSTs:2)
          • Aquitalea palustris (isolates:4; rSTs:1)
          • Aquitalea pelogenes (isolates:1; rSTs:1)
          • Aquitalea sp. (isolates:6; rSTs:5 tree)
        • Chromobacterium (isolates:92; rSTs:78 tree)
          • Chromobacterium alkanivorans (isolates:4; rSTs:2)
          • Chromobacterium alticapitis (isolates:1; rSTs:1)
          • Chromobacterium amazonense (isolates:3; rSTs:2)
          • Chromobacterium aquaticum (isolates:1; rSTs:1)
          • Chromobacterium haemolyticum (isolates:4; rSTs:4 tree)
          • Chromobacterium paludis (isolates:1; rSTs:1)
          • Chromobacterium phragmitis (isolates:4; rSTs:3 tree)
          • Chromobacterium piscinae (isolates:1; rSTs:1)
          • Chromobacterium rhizoryzae (isolates:1; rSTs:1)
          • Chromobacterium sinusclupearum (isolates:1; rSTs:1)
          • Chromobacterium sp. (isolates:13; rSTs:20 tree)
          • Chromobacterium sphagni (isolates:2; rSTs:2)
          • Chromobacterium subtsugae (isolates:8; rSTs:4 tree)
          • Chromobacterium vaccinii (isolates:18; rSTs:15 tree)
          • Chromobacterium violaceum (isolates:30; rSTs:20 tree)
        • Gulbenkiania (isolates:3; rSTs:2)
          • Gulbenkiania indica (isolates:2; rSTs:1)
          • Gulbenkiania mobilis (isolates:1; rSTs:1)
        • Paludibacterium (isolates:7; rSTs:5 tree)
          • Paludibacterium paludis (isolates:2; rSTs:1)
          • Paludibacterium purpuratum (isolates:1; rSTs:1)
          • Paludibacterium sp. (isolates:2; rSTs:2)
          • Paludibacterium yongneupense (isolates:2; rSTs:1)
        • Pseudogulbenkiania (isolates:4; rSTs:4 tree)
          • Pseudogulbenkiania ferrooxidans (isolates:1; rSTs:1)
          • Pseudogulbenkiania sp. (isolates:2; rSTs:2)
          • Pseudogulbenkiania subflava (isolates:1; rSTs:1)
        • Vogesella (isolates:18; rSTs:19 tree)
          • Vogesella alkaliphila (isolates:1; rSTs:1)
          • Vogesella aquatica (isolates:1; rSTs:1)
          • Vogesella fluminis (isolates:1; rSTs:1)
          • Vogesella indigofera (isolates:7; rSTs:7 tree)
          • Vogesella margarita (isolates:1; rSTs:1)
          • Vogesella oryzae (isolates:1; rSTs:1)
          • Vogesella sp. (isolates:5; rSTs:6 tree)
          • Vogesella urethralis (isolates:1; rSTs:1)
      • Leeiaceae (isolates:3; rSTs:3 tree)
        • Leeia (isolates:3; rSTs:3 tree)
          • Leeia aquatica (isolates:1; rSTs:1)
          • Leeia oryzae (isolates:1; rSTs:1)
          • Leeia speluncae (isolates:1; rSTs:1)
      • Neisseriaceae (isolates:79076; rSTs:25231)
        • Alysiella (isolates:6; rSTs:3 tree)
          • Alysiella crassa (isolates:3; rSTs:2)
          • Alysiella filiformis (isolates:3; rSTs:1)
        • Aquella (isolates:1; rSTs:1)
          • Aquella oligotrophica (isolates:1; rSTs:1)
        • Bergeriella (isolates:2; rSTs:2)
          • Bergeriella denitrificans (isolates:2; rSTs:2)
        • Conchiformibius (isolates:5; rSTs:3 tree)
          • Conchiformibius kuhniae (isolates:1; rSTs:1)
          • Conchiformibius steedae (isolates:4; rSTs:2)
        • Craterilacuibacter (isolates:2; rSTs:2)
          • Craterilacuibacter sinensis (isolates:1; rSTs:1)
          • Craterilacuibacter sp. (isolates:1; rSTs:1)
        • Crenobacter (isolates:8; rSTs:8 tree)
          • Crenobacter caeni (isolates:1; rSTs:1)
          • Crenobacter cavernae (isolates:2; rSTs:2)
          • Crenobacter intestini (isolates:1; rSTs:1)
          • Crenobacter luteus (isolates:2; rSTs:2)
          • Crenobacter oryzisoli (isolates:2; rSTs:2)
        • Eikenella (isolates:38; rSTs:33 tree)
          • Eikenella corrodens (isolates:21; rSTs:17 tree)
          • Eikenella exigua (isolates:2; rSTs:2)
          • Eikenella glucosivorans (isolates:1; rSTs:1)
          • Eikenella halliae (isolates:1; rSTs:1)
          • Eikenella longinqua (isolates:1; rSTs:1)
          • Eikenella sp. (isolates:12; rSTs:11 tree)
        • Kingella (isolates:176; rSTs:115 tree)
          • Kingella bonacorsii (isolates:1; rSTs:1)
          • Kingella denitrificans (isolates:25; rSTs:20 tree)
          • Kingella kingae (isolates:129; rSTs:79 tree)
          • Kingella negevensis (isolates:15; rSTs:8 tree)
          • Kingella oralis (isolates:2; rSTs:2)
          • Kingella potus (isolates:2; rSTs:2)
          • Kingella pumchi (isolates:1; rSTs:1)
          • Kingella sp. (isolates:1; rSTs:2)
        • Neisseria (isolates:78741; rSTs:24994)
          • Neisseria animalis (isolates:3; rSTs:1)
          • Neisseria animaloris (isolates:4; rSTs:5 tree)
          • Neisseria arctica (isolates:2; rSTs:1)
          • Neisseria bacilliformis (isolates:6; rSTs:8 tree)
          • Neisseria basseii (isolates:2; rSTs:1)
          • Neisseria benedictiae (isolates:3; rSTs:2)
          • Neisseria bergeri (isolates:63; rSTs:49 tree)
          • Neisseria blantyrii (isolates:14; rSTs:8 tree)
          • Neisseria brasiliensis (isolates:2; rSTs:2)
          • Neisseria canis (isolates:2; rSTs:2)
          • Neisseria chenwenguii (isolates:2; rSTs:2)
          • Neisseria cinerea (isolates:39; rSTs:107 tree)
          • Neisseria dentiae (isolates:4; rSTs:3 tree)
          • Neisseria dumasiana (isolates:4; rSTs:2)
          • Neisseria elongata (isolates:19; rSTs:26 tree)
          • Neisseria gonorrhoeae (isolates:41100; rSTs:6724)
          • Neisseria iguanae (isolates:1; rSTs:1)
          • Neisseria lactamica (isolates:1266; rSTs:1080 tree)
          • Neisseria leonii (isolates:3; rSTs:3 tree)
          • Neisseria lisongii (isolates:2; rSTs:2)
          • Neisseria maigaei (isolates:1; rSTs:1)
          • Neisseria meningitidis (isolates:35829; rSTs:15796)
          • Neisseria montereyensis (isolates:1; rSTs:1)
          • Neisseria mucosa (isolates:35; rSTs:135 tree)
          • Neisseria musculi (isolates:9; rSTs:2)
          • Neisseria oralis (isolates:7; rSTs:24 tree)
          • Neisseria polysaccharea (isolates:71; rSTs:142 tree)
          • Neisseria shayeganii (isolates:2; rSTs:2)
          • Neisseria sp. (isolates:102; rSTs:106 tree)
          • Neisseria subflava (isolates:90; rSTs:725 tree)
          • Neisseria uirgultaei (isolates:9; rSTs:3 tree)
          • Neisseria viridiae (isolates:23; rSTs:7 tree)
          • Neisseria wadsworthii (isolates:3; rSTs:2)
          • Neisseria weaveri (isolates:9; rSTs:10 tree)
          • Neisseria weixii (isolates:3; rSTs:2)
          • Neisseria yangbaofengii (isolates:2; rSTs:2)
          • Neisseria zalophi (isolates:1; rSTs:1)
          • Neisseria zoodegmatis (isolates:3; rSTs:4 tree)
        • Paralysiella (isolates:1; rSTs:1)
          • Paralysiella testudinis (isolates:1; rSTs:1)
        • Simonsiella (isolates:3; rSTs:1)
          • Simonsiella muelleri (isolates:3; rSTs:1)
        • Snodgrassella (isolates:75; rSTs:55 tree)
          • Snodgrassella alvi (isolates:36; rSTs:15 tree)
          • Snodgrassella communis (isolates:17; rSTs:11 tree)
          • Snodgrassella gandavensis (isolates:2; rSTs:2)
          • Snodgrassella sp. (isolates:20; rSTs:27 tree)
        • Stenoxybacter (isolates:1; rSTs:1)
          • Stenoxybacter acetivorans (isolates:1; rSTs:1)
        • Uruburuella (isolates:3; rSTs:2)
          • Uruburuella suis (isolates:2; rSTs:1)
          • Uruburuella testudinis (isolates:1; rSTs:1)
        • Vitreoscilla (isolates:7; rSTs:4 tree)
          • Vitreoscilla filiformis (isolates:1; rSTs:1)
          • Vitreoscilla massiliensis (isolates:3; rSTs:1)
          • Vitreoscilla sp. (isolates:1; rSTs:1)
          • Vitreoscilla stercoraria (isolates:2; rSTs:1)
        • Wielerella (isolates:7; rSTs:6 tree)
          • Wielerella bovis (isolates:7; rSTs:6 tree)
    • Nitrosomonadales (isolates:243; rSTs:198 tree)
      • Gallionellaceae (isolates:15; rSTs:14 tree)
        • Candidatus Nitrotoga (isolates:7; rSTs:7 tree)
          • Candidatus Nitrotoga arctica (isolates:1; rSTs:1)
          • Candidatus Nitrotoga fabula (isolates:1; rSTs:1)
          • Candidatus Nitrotoga sp. (isolates:5; rSTs:5 tree)
        • Ferrigenium (isolates:1; rSTs:1)
          • Ferrigenium kumadai (isolates:1; rSTs:1)
        • Ferriphaselus (isolates:2; rSTs:2)
          • Ferriphaselus amnicola (isolates:1; rSTs:1)
          • Ferriphaselus sp. (isolates:1; rSTs:1)
        • Gallionella (isolates:2; rSTs:2)
          • Candidatus Gallionella acididurans (isolates:1; rSTs:1)
          • Gallionella capsiferriformans (isolates:1; rSTs:1)
        • Sideroxyarcus (isolates:1; rSTs:1)
          • Sideroxyarcus emersonii (isolates:1; rSTs:1)
        • Sideroxydans (isolates:2; rSTs:1)
          • Sideroxydans lithotrophicus (isolates:2; rSTs:1)
      • Methylophilaceae (isolates:88; rSTs:67 tree)
        • Candidatus Methylopumilus (isolates:40; rSTs:23 tree)
          • Candidatus Methylopumilus planktonicus (isolates:8; rSTs:5 tree)
          • Candidatus Methylopumilus rimovensis (isolates:2; rSTs:2)
          • Candidatus Methylopumilus turicensis (isolates:1; rSTs:1)
          • Candidatus Methylopumilus universalis (isolates:29; rSTs:15 tree)
        • Methylobacillus (isolates:7; rSTs:7 tree)
          • Methylobacillus arboreus (isolates:1; rSTs:1)
          • Methylobacillus caricis (isolates:1; rSTs:1)
          • Methylobacillus flagellatus (isolates:1; rSTs:1)
          • Methylobacillus glycogenes (isolates:1; rSTs:1)
          • Methylobacillus gramineus (isolates:1; rSTs:1)
          • Methylobacillus methanolivorans (isolates:1; rSTs:1)
          • Methylobacillus rhizosphaerae (isolates:1; rSTs:1)
        • Methylophilus (isolates:23; rSTs:19 tree)
          • Methylophilus aquaticus (isolates:1; rSTs:1)
          • Methylophilus medardicus (isolates:3; rSTs:1)
          • Methylophilus methylotrophus (isolates:2; rSTs:2)
          • Methylophilus rhizosphaerae (isolates:1; rSTs:1)
          • Methylophilus sp. (isolates:16; rSTs:14 tree)
        • Methyloradius (isolates:1; rSTs:1)
          • Methyloradius palustris (isolates:1; rSTs:1)
        • Methylotenera (isolates:10; rSTs:10 tree)
          • Methylotenera mobilis (isolates:1; rSTs:1)
          • Methylotenera oryzisoli (isolates:1; rSTs:1)
          • Methylotenera sp. (isolates:4; rSTs:6 tree)
          • Methylotenera versatilis (isolates:4; rSTs:2)
        • Methylovorus (isolates:5; rSTs:5 tree)
          • Methylovorus glucosotrophus (isolates:2; rSTs:2)
          • Methylovorus mays (isolates:1; rSTs:1)
          • Methylovorus menthalis (isolates:1; rSTs:1)
          • Methylovorus sp. (isolates:1; rSTs:1)
        • Novimethylophilus (isolates:1; rSTs:1)
          • Novimethylophilus kurashikiensis (isolates:1; rSTs:1)
        • Pseudomethylobacillus (isolates:1; rSTs:1)
          • Pseudomethylobacillus aquaticus (isolates:1; rSTs:1)
      • Nitrosomonadaceae (isolates:94; rSTs:78 tree)
        • Nitrosomonas (isolates:67; rSTs:54 tree)
          • Nitrosomonas aestuarii (isolates:2; rSTs:2)
          • Nitrosomonas communis (isolates:4; rSTs:4 tree)
          • Nitrosomonas cryotolerans (isolates:3; rSTs:1)
          • Nitrosomonas europaea (isolates:6; rSTs:4 tree)
          • Nitrosomonas eutropha (isolates:7; rSTs:5 tree)
          • Nitrosomonas halophila (isolates:1; rSTs:1)
          • Nitrosomonas marina (isolates:2; rSTs:2)
          • Nitrosomonas mobilis (isolates:1; rSTs:1)
          • Nitrosomonas nitrosa (isolates:4; rSTs:4 tree)
          • Nitrosomonas oligotropha (isolates:4; rSTs:4 tree)
          • Nitrosomonas sp. (isolates:23; rSTs:17 tree)
          • Nitrosomonas stercoris (isolates:1; rSTs:1)
          • Nitrosomonas supralitoralis (isolates:1; rSTs:1)
          • Nitrosomonas ureae (isolates:8; rSTs:7 tree)
        • Nitrosospira (isolates:26; rSTs:23 tree)
          • Nitrosospira briensis (isolates:3; rSTs:3 tree)
          • Nitrosospira lacus (isolates:1; rSTs:1)
          • Nitrosospira multiformis (isolates:11; rSTs:9 tree)
          • Nitrosospira sp. (isolates:11; rSTs:10 tree)
        • Nitrosovibrio (isolates:1; rSTs:1)
          • Nitrosovibrio tenuis (isolates:1; rSTs:1)
      • Sterolibacteriaceae (isolates:22; rSTs:18 tree)
        • Denitratisoma (isolates:3; rSTs:2)
          • Denitratisoma oestradiolicum (isolates:2; rSTs:1)
          • Denitratisoma sp. (isolates:1; rSTs:1)
        • Georgfuchsia (isolates:1; rSTs:1)
          • Georgfuchsia toluolica (isolates:1; rSTs:1)
        • Methyloversatilis (isolates:11; rSTs:9 tree)
          • Methyloversatilis discipulorum (isolates:3; rSTs:2)
          • Methyloversatilis sp. (isolates:4; rSTs:4 tree)
          • Methyloversatilis thermotolerans (isolates:1; rSTs:1)
          • Methyloversatilis universalis (isolates:3; rSTs:2)
        • Rugosibacter (isolates:1; rSTs:1)
          • Rugosibacter aromaticivorans (isolates:1; rSTs:1)
        • Sterolibacterium (isolates:1; rSTs:1)
          • Sterolibacterium denitrificans (isolates:1; rSTs:1)
        • Sulfuricystis (isolates:2; rSTs:2)
          • Sulfuricystis multivorans (isolates:1; rSTs:1)
          • Sulfuricystis thermophila (isolates:1; rSTs:1)
        • Sulfurisoma (isolates:2; rSTs:1)
          • Sulfurisoma sediminicola (isolates:2; rSTs:1)
        • Sulfuritalea (isolates:1; rSTs:1)
          • Sulfuritalea hydrogenivorans (isolates:1; rSTs:1)
      • Sulfuricellaceae (isolates:11; rSTs:9 tree)
        • Sulfuricella (isolates:2; rSTs:2)
          • Sulfuricella denitrificans (isolates:1; rSTs:1)
          • Sulfuricella sp. (isolates:1; rSTs:1)
        • Sulfuriferula (isolates:6; rSTs:5 tree)
          • Sulfuriferula multivorans (isolates:1; rSTs:1)
          • Sulfuriferula nivalis (isolates:1; rSTs:1)
          • Sulfuriferula plumbiphila (isolates:2; rSTs:1)
          • Sulfuriferula sp. (isolates:1; rSTs:1)
          • Sulfuriferula thiophila (isolates:1; rSTs:1)
        • Sulfurimicrobium (isolates:1; rSTs:1)
          • Sulfurimicrobium lacus (isolates:1; rSTs:1)
        • Sulfurirhabdus (isolates:2; rSTs:1)
          • Sulfurirhabdus autotrophica (isolates:2; rSTs:1)
      • Thiobacillaceae (isolates:11; rSTs:10 tree)
        • Annwoodia (isolates:1; rSTs:1)
          • Annwoodia aquaesulis (isolates:1; rSTs:1)
        • Parasulfuritortus (isolates:1; rSTs:1)
          • Parasulfuritortus cantonensis (isolates:1; rSTs:1)
        • Sulfuritortus (isolates:2; rSTs:1)
          • Sulfuritortus calidifontis (isolates:2; rSTs:1)
        • Thiobacillus (isolates:7; rSTs:7 tree)
          • Thiobacillus denitrificans (isolates:1; rSTs:2)
          • Thiobacillus sp. (isolates:4; rSTs:3 tree)
          • Thiobacillus thioparus (isolates:1; rSTs:1)
          • Thiobacillus thiophilus (isolates:1; rSTs:1)
      • Usitatibacteraceae (isolates:2; rSTs:2)
        • Usitatibacter (isolates:2; rSTs:2)
          • Usitatibacter palustris (isolates:1; rSTs:1)
          • Usitatibacter rugosus (isolates:1; rSTs:1)
    • Rhodocyclales (isolates:149; rSTs:125 tree)
      • Azonexaceae (isolates:24; rSTs:24 tree)
        • Azonexus (isolates:6; rSTs:6 tree)
          • Azonexus fungiphilus (isolates:2; rSTs:2)
          • Azonexus hydrophilus (isolates:3; rSTs:3 tree)
          • Azonexus sp. (isolates:1; rSTs:1)
        • Dechloromonas (isolates:13; rSTs:14 tree)
          • Dechloromonas agitata (isolates:2; rSTs:2)
          • Dechloromonas aromatica (isolates:1; rSTs:1)
          • Dechloromonas denitrificans (isolates:1; rSTs:1)
          • Dechloromonas hankyongensis (isolates:1; rSTs:1)
          • Dechloromonas hortensis (isolates:1; rSTs:1)
          • Dechloromonas sp. (isolates:7; rSTs:8 tree)
        • Ferribacterium (isolates:3; rSTs:2)
          • Ferribacterium limneticum (isolates:3; rSTs:2)
        • Quatrionicoccus (isolates:2; rSTs:2)
          • Quatrionicoccus australiensis (isolates:2; rSTs:2)
      • Fluviibacteraceae (isolates:3; rSTs:2)
        • Fluviibacter (isolates:3; rSTs:2)
          • Fluviibacter phosphoraccumulans (isolates:3; rSTs:2)
      • Rhodocyclaceae (isolates:48; rSTs:38 tree)
        • Aromatoleum (isolates:16; rSTs:12 tree)
          • Aromatoleum anaerobium (isolates:1; rSTs:1)
          • Aromatoleum aromaticum (isolates:3; rSTs:2)
          • Aromatoleum bremense (isolates:2; rSTs:1)
          • Aromatoleum buckelii (isolates:1; rSTs:1)
          • Aromatoleum diolicum (isolates:1; rSTs:1)
          • Aromatoleum evansii (isolates:2; rSTs:1)
          • Aromatoleum petrolei (isolates:2; rSTs:1)
          • Aromatoleum toluclasticum (isolates:2; rSTs:2)
          • Aromatoleum tolulyticum (isolates:1; rSTs:1)
          • Aromatoleum toluvorans (isolates:1; rSTs:1)
        • Azospira (isolates:8; rSTs:7 tree)
          • Azospira inquinata (isolates:2; rSTs:1)
          • Azospira oryzae (isolates:3; rSTs:3 tree)
          • Azospira restricta (isolates:1; rSTs:1)
          • Azospira sp. (isolates:2; rSTs:2)
        • Azovibrio (isolates:1; rSTs:1)
          • Azovibrio restrictus (isolates:1; rSTs:1)
        • Candidatus Dactylopiibacterium (isolates:4; rSTs:2)
          • Candidatus Dactylopiibacterium carminicum (isolates:4; rSTs:2)
        • Niveibacterium (isolates:6; rSTs:4 tree)
          • Niveibacterium microcysteis (isolates:1; rSTs:1)
          • Niveibacterium sp. (isolates:2; rSTs:2)
          • Niveibacterium umoris (isolates:3; rSTs:1)
        • Oryzomicrobium (isolates:1; rSTs:1)
          • Oryzomicrobium terrae (isolates:1; rSTs:1)
        • Propionivibrio (isolates:4; rSTs:4 tree)
          • Candidatus Propionivibrio aalborgensis (isolates:1; rSTs:1)
          • Propionivibrio dicarboxylicus (isolates:1; rSTs:1)
          • Propionivibrio limicola (isolates:1; rSTs:1)
          • Propionivibrio soli (isolates:1; rSTs:1)
        • Rhodocyclus (isolates:7; rSTs:6 tree)
          • Rhodocyclus gracilis (isolates:3; rSTs:3 tree)
          • Rhodocyclus purpureus (isolates:1; rSTs:1)
          • Rhodocyclus tenuis (isolates:3; rSTs:2)
        • Viridibacterium (isolates:1; rSTs:1)
          • Viridibacterium curvum (isolates:1; rSTs:1)
      • Zoogloeaceae (isolates:74; rSTs:61 tree)
        • Azoarcus (isolates:8; rSTs:7 tree)
          • Azoarcus indigens (isolates:1; rSTs:1)
          • Azoarcus olearius (isolates:2; rSTs:2)
          • Azoarcus sp. (isolates:3; rSTs:3 tree)
          • Azoarcus taiwanensis (isolates:2; rSTs:1)
        • Cognatazoarcus (isolates:1; rSTs:1)
          • Cognatazoarcus halotolerans (isolates:1; rSTs:1)
        • Denitromonas (isolates:4; rSTs:3 tree)
          • Denitromonas halophila (isolates:1; rSTs:1)
          • Denitromonas iodatirespirans (isolates:1; rSTs:1)
          • Denitromonas ohlonensis (isolates:2; rSTs:1)
        • Nitrogeniibacter (isolates:3; rSTs:3 tree)
          • Nitrogeniibacter aestuarii (isolates:2; rSTs:2)
          • Nitrogeniibacter mangrovi (isolates:1; rSTs:1)
        • Parazoarcus (isolates:3; rSTs:2)
          • Parazoarcus communis (isolates:3; rSTs:2)
        • Pseudazoarcus (isolates:1; rSTs:1)
          • Pseudazoarcus pumilus (isolates:1; rSTs:1)
        • Pseudothauera (isolates:4; rSTs:4 tree)
          • Pseudothauera hydrothermalis (isolates:1; rSTs:1)
          • Pseudothauera lacus (isolates:1; rSTs:1)
          • Pseudothauera nasutitermitis (isolates:1; rSTs:1)
          • Pseudothauera rhizosphaerae (isolates:1; rSTs:1)
        • Thauera (isolates:34; rSTs:27 tree)
          • Thauera aminoaromatica (isolates:2; rSTs:2)
          • Thauera aromatica (isolates:4; rSTs:4 tree)
          • Thauera butanivorans (isolates:1; rSTs:1)
          • Thauera chlorobenzoica (isolates:2; rSTs:1)
          • Thauera humireducens (isolates:3; rSTs:2)
          • Thauera linaloolentis (isolates:3; rSTs:1)
          • Thauera mechernichensis (isolates:1; rSTs:1)
          • Thauera phenolivorans (isolates:1; rSTs:1)
          • Thauera phenylacetica (isolates:1; rSTs:1)
          • Thauera propionica (isolates:1; rSTs:1)
          • Thauera sedimentorum (isolates:2; rSTs:1)
          • Thauera sp. (isolates:12; rSTs:10 tree)
          • Thauera terpenica (isolates:1; rSTs:1)
        • Uliginosibacterium (isolates:10; rSTs:7 tree)
          • Uliginosibacterium aquaticum (isolates:1; rSTs:1)
          • Uliginosibacterium flavum (isolates:1; rSTs:1)
          • Uliginosibacterium gangwonense (isolates:1; rSTs:1)
          • Uliginosibacterium paludis (isolates:2; rSTs:1)
          • Uliginosibacterium sediminicola (isolates:1)
          • Uliginosibacterium sp. (isolates:4; rSTs:3 tree)
        • Zoogloea (isolates:6; rSTs:6 tree)
          • Zoogloea dura (isolates:1; rSTs:1)
          • Zoogloea oleivorans (isolates:1; rSTs:1)
          • Zoogloea oryzae (isolates:1; rSTs:1)
          • Zoogloea ramigera (isolates:1; rSTs:1)
          • Zoogloea sp. (isolates:2; rSTs:2)
  • Gammaproteobacteria (isolates:298053; rSTs:82418)
    • Acidiferrobacterales (isolates:5; rSTs:5 tree)
      • Acidiferrobacteraceae (isolates:5; rSTs:5 tree)
        • Acidiferrobacter (isolates:3; rSTs:3 tree)
          • Acidiferrobacter sp. (isolates:1; rSTs:1)
          • Acidiferrobacter thiooxydans (isolates:2; rSTs:2)
        • Sulfuricaulis (isolates:1; rSTs:1)
          • Sulfuricaulis limicola (isolates:1; rSTs:1)
        • Sulfurifustis (isolates:1; rSTs:1)
          • Sulfurifustis variabilis (isolates:1; rSTs:1)
    • Aeromonadales (isolates:2163; rSTs:1313 tree)
      • Aeromonadaceae (isolates:2142; rSTs:1295 tree)
        • Aeromonas (isolates:2107; rSTs:1264 tree)
          • Aeromonas allosaccharophila (isolates:29; rSTs:24 tree)
          • Aeromonas aquatica (isolates:1; rSTs:1)
          • Aeromonas australiensis (isolates:2; rSTs:2)
          • Aeromonas bestiarum (isolates:10; rSTs:8 tree)
          • Aeromonas bivalvium (isolates:5; rSTs:2)
          • Aeromonas cavernicola (isolates:1; rSTs:1)
          • Aeromonas caviae (isolates:451; rSTs:321 tree)
          • Aeromonas dhakensis (isolates:131; rSTs:77 tree)
          • Aeromonas diversa (isolates:3; rSTs:2)
          • Aeromonas encheleia (isolates:5; rSTs:3 tree)
          • Aeromonas enteropelogenes (isolates:18; rSTs:14 tree)
          • Aeromonas eucrenophila (isolates:1; rSTs:1)
          • Aeromonas finlandensis (isolates:1; rSTs:1)
          • Aeromonas fluvialis (isolates:1; rSTs:1)
          • Aeromonas genomosp. paramedia (isolates:1; rSTs:1)
          • Aeromonas hydrophila (isolates:296; rSTs:149 tree)
          • Aeromonas jandaei (isolates:45; rSTs:30 tree)
          • Aeromonas lacus (isolates:1; rSTs:1)
          • Aeromonas lusitana (isolates:1; rSTs:1)
          • Aeromonas media (isolates:29; rSTs:19 tree)
          • Aeromonas molluscorum (isolates:1; rSTs:1)
          • Aeromonas piscicola (isolates:4; rSTs:4 tree)
          • Aeromonas popoffii (isolates:5; rSTs:3 tree)
          • Aeromonas rivipollensis (isolates:19; rSTs:13 tree)
          • Aeromonas rivuli (isolates:2; rSTs:2)
          • Aeromonas salmonicida (isolates:325; rSTs:72 tree)
          • Aeromonas sanarellii (isolates:5; rSTs:4 tree)
          • Aeromonas schubertii (isolates:6; rSTs:5 tree)
          • Aeromonas simiae (isolates:5; rSTs:4 tree)
          • Aeromonas sobria (isolates:14; rSTs:10 tree)
          • Aeromonas sp. (isolates:283; rSTs:212 tree)
          • Aeromonas taiwanensis (isolates:6; rSTs:3 tree)
          • Aeromonas tecta (isolates:2; rSTs:1)
          • Aeromonas veronii (isolates:398; rSTs:271 tree)
        • Dongshaea (isolates:1; rSTs:1)
          • Dongshaea marina (isolates:1; rSTs:1)
        • Oceanimonas (isolates:12; rSTs:10 tree)
          • Oceanimonas baumannii (isolates:3; rSTs:2)
          • Oceanimonas doudoroffii (isolates:1; rSTs:1)
          • Oceanimonas marisflavi (isolates:1; rSTs:1)
          • Oceanimonas pelagia (isolates:1; rSTs:1)
          • Oceanimonas smirnovii (isolates:1; rSTs:1)
          • Oceanimonas sp. (isolates:5; rSTs:4 tree)
        • Oceanisphaera (isolates:10; rSTs:9 tree)
          • Oceanisphaera arctica (isolates:2; rSTs:1)
          • Oceanisphaera avium (isolates:1; rSTs:1)
          • Oceanisphaera litoralis (isolates:1; rSTs:1)
          • Oceanisphaera marina (isolates:1; rSTs:1)
          • Oceanisphaera pacifica (isolates:1; rSTs:1)
          • Oceanisphaera profunda (isolates:1; rSTs:1)
          • Oceanisphaera psychrotolerans (isolates:1; rSTs:1)
          • Oceanisphaera sediminis (isolates:1; rSTs:1)
          • Oceanisphaera sp. (isolates:1; rSTs:1)
        • Pseudaeromonas (isolates:1; rSTs:1)
          • Pseudaeromonas paramecii (isolates:1; rSTs:1)
        • Tolumonas (isolates:4; rSTs:3 tree)
          • Tolumonas auensis (isolates:2; rSTs:1)
          • Tolumonas lignilytica (isolates:1; rSTs:1)
          • Tolumonas osonensis (isolates:1; rSTs:1)
        • Zobellella (isolates:7; rSTs:7 tree)
          • Zobellella aerophila (isolates:1; rSTs:1)
          • Zobellella denitrificans (isolates:2; rSTs:2)
          • Zobellella endophytica (isolates:1; rSTs:1)
          • Zobellella iuensis (isolates:1; rSTs:1)
          • Zobellella maritima (isolates:1; rSTs:1)
          • Zobellella taiwanensis (isolates:1; rSTs:1)
      • Succinivibrionaceae (isolates:21; rSTs:18 tree)
        • Anaerobiospirillum (isolates:7; rSTs:6 tree)
          • Anaerobiospirillum sp. (isolates:4; rSTs:3 tree)
          • Anaerobiospirillum succiniciproducens (isolates:1; rSTs:1)
          • Anaerobiospirillum thomasii (isolates:2; rSTs:2)
        • Ruminobacter (isolates:2; rSTs:2)
          • Ruminobacter amylophilus (isolates:1; rSTs:1)
          • Ruminobacter sp. (isolates:1; rSTs:1)
        • Succinatimonas (isolates:4; rSTs:3 tree)
          • Succinatimonas hippei (isolates:4; rSTs:3 tree)
        • Succinimonas (isolates:1; rSTs:1)
          • Succinimonas amylolytica (isolates:1; rSTs:1)
        • Succinivibrio (isolates:7; rSTs:6 tree)
          • Succinivibrio dextrinosolvens (isolates:6; rSTs:5 tree)
          • Succinivibrio faecicola (isolates:1; rSTs:1)
    • Alteromonadales (isolates:1949; rSTs:1521)
      • Alteromonadaceae (isolates:275; rSTs:230 tree)
        • Aestuariibacter (isolates:2; rSTs:2)
          • Aestuariibacter halophilus (isolates:1; rSTs:1)
          • Aestuariibacter salexigens (isolates:1; rSTs:1)
        • Agaribacter (isolates:1; rSTs:1)
          • Agaribacter marinus (isolates:1; rSTs:1)
        • Agarivorans (isolates:16; rSTs:13 tree)
          • Agarivorans aestuarii (isolates:2; rSTs:2)
          • Agarivorans albus (isolates:2; rSTs:2)
          • Agarivorans gilvus (isolates:2; rSTs:1)
          • Agarivorans litoreus (isolates:1; rSTs:1)
          • Agarivorans sp. (isolates:9; rSTs:7 tree)
        • Algibacillus (isolates:1; rSTs:1)
          • Algibacillus agarilyticus (isolates:1; rSTs:1)
        • Alginatibacterium (isolates:1; rSTs:1)
          • Alginatibacterium sediminis (isolates:1; rSTs:1)
        • Aliagarivorans (isolates:2; rSTs:2)
          • Aliagarivorans marinus (isolates:1; rSTs:1)
          • Aliagarivorans taiwanensis (isolates:1; rSTs:1)
        • Aliiglaciecola (isolates:7; rSTs:6 tree)
          • Aliiglaciecola lipolytica (isolates:2; rSTs:2)
          • Aliiglaciecola litoralis (isolates:1; rSTs:1)
          • Aliiglaciecola sp. (isolates:4; rSTs:3 tree)
        • Alishewanella (isolates:10; rSTs:10 tree)
          • Alishewanella aestuarii (isolates:1; rSTs:1)
          • Alishewanella agri (isolates:1; rSTs:1)
          • Alishewanella jeotgali (isolates:1; rSTs:1)
          • Alishewanella longhuensis (isolates:1; rSTs:1)
          • Alishewanella maricola (isolates:1; rSTs:1)
          • Alishewanella sp. (isolates:4; rSTs:4 tree)
          • Alishewanella tabrizica (isolates:1; rSTs:1)
        • Alkalimarinus (isolates:6; rSTs:3 tree)
          • Alkalimarinus alittae (isolates:1; rSTs:1)
          • Alkalimarinus coralli (isolates:3; rSTs:1)
          • Alkalimarinus sediminis (isolates:2; rSTs:1)
        • Alteromonas (isolates:161; rSTs:128 tree)
          • Alteromonas abrolhosensis (isolates:2; rSTs:1)
          • Alteromonas aestuariivivens (isolates:1; rSTs:1)
          • Alteromonas alba (isolates:1; rSTs:1)
          • Alteromonas antoniana (isolates:1; rSTs:1)
          • Alteromonas aquimaris (isolates:1; rSTs:1)
          • Alteromonas arenosi (isolates:1; rSTs:1)
          • Alteromonas australica (isolates:2; rSTs:2)
          • Alteromonas confluentis (isolates:1; rSTs:1)
          • Alteromonas facilis (isolates:1; rSTs:1)
          • Alteromonas flava (isolates:1; rSTs:1)
          • Alteromonas genovensis (isolates:2; rSTs:2)
          • Alteromonas gilva (isolates:1; rSTs:1)
          • Alteromonas gracilis (isolates:2; rSTs:2)
          • Alteromonas halophila (isolates:1; rSTs:1)
          • Alteromonas hispanica (isolates:1; rSTs:1)
          • Alteromonas lipolytica (isolates:2; rSTs:1)
          • Alteromonas lipotrueae (isolates:2; rSTs:2)
          • Alteromonas lipotrueiana (isolates:1; rSTs:1)
          • Alteromonas macleodii (isolates:39; rSTs:24 tree)
          • Alteromonas marina (isolates:1; rSTs:1)
          • Alteromonas mediterranea (isolates:18; rSTs:12 tree)
          • Alteromonas naphthalenivorans (isolates:1; rSTs:1)
          • Alteromonas oceani (isolates:1; rSTs:1)
          • Alteromonas oceanisediminis (isolates:1; rSTs:1)
          • Alteromonas pelagimontana (isolates:1; rSTs:1)
          • Alteromonas ponticola (isolates:1; rSTs:1)
          • Alteromonas portus (isolates:1; rSTs:1)
          • Alteromonas profundi (isolates:1; rSTs:1)
          • Alteromonas salexigens (isolates:1; rSTs:1)
          • Alteromonas sediminis (isolates:1; rSTs:1)
          • Alteromonas sp. (isolates:57; rSTs:49 tree)
          • Alteromonas stellipolaris (isolates:13; rSTs:11 tree)
        • Bowmanella (isolates:6; rSTs:5 tree)
          • Bowmanella denitrificans (isolates:2; rSTs:1)
          • Bowmanella dokdonensis (isolates:1; rSTs:1)
          • Bowmanella pacifica (isolates:1; rSTs:1)
          • Bowmanella yangjiangensis (isolates:2; rSTs:2)
        • Brumicola (isolates:1; rSTs:1)
          • Brumicola blandensis (isolates:1; rSTs:1)
        • Catenovulum (isolates:7; rSTs:7 tree)
          • Catenovulum adriaticum (isolates:1; rSTs:1)
          • Catenovulum agarivorans (isolates:2; rSTs:2)
          • Catenovulum maritimum (isolates:1; rSTs:1)
          • Catenovulum sediminis (isolates:2; rSTs:2)
          • Catenovulum sp. (isolates:1; rSTs:1)
        • Fluctibacter (isolates:1; rSTs:1)
          • Fluctibacter corallii (isolates:1; rSTs:1)
        • Gayadomonas (isolates:1; rSTs:1)
          • Gayadomonas joobiniege (isolates:1; rSTs:1)
        • Glaciecola (isolates:7; rSTs:6 tree)
          • Glaciecola nitratireducens (isolates:1; rSTs:1)
          • Glaciecola pallidula (isolates:2; rSTs:1)
          • Glaciecola petra (isolates:1; rSTs:1)
          • Glaciecola punicea (isolates:2; rSTs:2)
          • Glaciecola sp. (isolates:1; rSTs:1 tree)
        • Halioxenophilus (isolates:1; rSTs:1)
          • Halioxenophilus aromaticivorans (isolates:1; rSTs:1)
        • Hydrocarboniclastica (isolates:1; rSTs:1)
          • Hydrocarboniclastica marina (isolates:1; rSTs:1)
        • Lacimicrobium (isolates:4; rSTs:3 tree)
          • Lacimicrobium alkaliphilum (isolates:3; rSTs:2)
          • Lacimicrobium sp. (isolates:1; rSTs:1)
        • Marinifaba (isolates:1; rSTs:1)
          • Marinifaba aquimaris (isolates:1; rSTs:1)
        • Marisediminitalea (isolates:2; rSTs:1)
          • Marisediminitalea aggregata (isolates:2; rSTs:1)
        • Neptunicella (isolates:1; rSTs:1)
          • Neptunicella marina (isolates:1; rSTs:1)
        • Ningiella (isolates:1; rSTs:1)
          • Ningiella ruwaisensis (isolates:1; rSTs:1)
        • Opacimonas (isolates:1; rSTs:1)
          • Opacimonas viscosa (isolates:1; rSTs:1)
        • Paraglaciecola (isolates:21; rSTs:21 tree)
          • Paraglaciecola agarilytica (isolates:2; rSTs:2)
          • Paraglaciecola aquimarina (isolates:1; rSTs:1)
          • Paraglaciecola arctica (isolates:2; rSTs:2)
          • Paraglaciecola chathamensis (isolates:3; rSTs:3 tree)
          • Paraglaciecola hydrolytica (isolates:1; rSTs:1)
          • Paraglaciecola marina (isolates:1; rSTs:1)
          • Paraglaciecola mesophila (isolates:2; rSTs:2)
          • Paraglaciecola polaris (isolates:1; rSTs:1)
          • Paraglaciecola psychrophila (isolates:2; rSTs:1)
          • Paraglaciecola sp. (isolates:6; rSTs:7 tree)
        • Paraneptunicella (isolates:1; rSTs:1)
          • Paraneptunicella aestuarii (isolates:1; rSTs:1)
        • Planctobacterium (isolates:3; rSTs:2)
          • Planctobacterium marinum (isolates:3; rSTs:2)
        • Saccharobesus (isolates:1; rSTs:1)
          • Saccharobesus litoralis (isolates:1; rSTs:1)
        • Salinimonas (isolates:6; rSTs:6 tree)
          • Salinimonas chungwhensis (isolates:1; rSTs:1)
          • Salinimonas iocasae (isolates:1; rSTs:1)
          • Salinimonas lutimaris (isolates:1; rSTs:1)
          • Salinimonas marina (isolates:1; rSTs:1)
          • Salinimonas profundi (isolates:1; rSTs:1)
          • Salinimonas sediminis (isolates:1; rSTs:1)
        • Saliniradius (isolates:1; rSTs:1)
          • Saliniradius amylolyticus (isolates:1; rSTs:1)
      • Colwelliaceae (isolates:112; rSTs:83 tree)
        • Cognaticolwellia (isolates:5; rSTs:4 tree)
          • Cognaticolwellia aestuarii (isolates:2; rSTs:1)
          • Cognaticolwellia beringensis (isolates:1; rSTs:1)
          • Cognaticolwellia mytili (isolates:1; rSTs:1)
          • Cognaticolwellia sediminilitoris (isolates:1; rSTs:1)
        • Colwellia (isolates:63; rSTs:39 tree)
          • Candidatus Colwellia aromaticivorans (isolates:1; rSTs:1)
          • Colwellia asteriadis (isolates:1; rSTs:1)
          • Colwellia chukchiensis (isolates:2; rSTs:1)
          • Colwellia demingiae (isolates:1; rSTs:1)
          • Colwellia echini (isolates:1; rSTs:1)
          • Colwellia hornerae (isolates:3; rSTs:1)
          • Colwellia marinimaniae (isolates:1; rSTs:1)
          • Colwellia maritima (isolates:1)
          • Colwellia piezophila (isolates:1; rSTs:1)
          • Colwellia polaris (isolates:1; rSTs:1)
          • Colwellia ponticola (isolates:1; rSTs:1)
          • Colwellia psychrerythraea (isolates:1; rSTs:1)
          • Colwellia sp. (isolates:48; rSTs:28 tree)
        • Litorilituus (isolates:2; rSTs:2)
          • Litorilituus lipolyticus (isolates:1; rSTs:1)
          • Litorilituus sediminis (isolates:1; rSTs:1)
        • Pseudocolwellia (isolates:3; rSTs:2)
          • Pseudocolwellia agarivorans (isolates:1; rSTs:1)
          • Pseudocolwellia sp. (isolates:2; rSTs:1)
        • Thalassomonas (isolates:4; rSTs:5 tree)
          • Thalassomonas actiniarum (isolates:1; rSTs:2)
          • Thalassomonas haliotis (isolates:1; rSTs:1)
          • Thalassomonas sp. (isolates:1; rSTs:1)
          • Thalassomonas viridans (isolates:1; rSTs:1)
        • Thalassotalea (isolates:35; rSTs:31 tree)
          • Thalassotalea agarivorans (isolates:2; rSTs:1)
          • Thalassotalea algicola (isolates:1; rSTs:1)
          • Thalassotalea atypica (isolates:1; rSTs:1)
          • Thalassotalea castellviae (isolates:1; rSTs:1)
          • Thalassotalea crassostreae (isolates:2; rSTs:1)
          • Thalassotalea euphylliae (isolates:3; rSTs:3 tree)
          • Thalassotalea eurytherma (isolates:1; rSTs:1)
          • Thalassotalea fonticola (isolates:1; rSTs:1)
          • Thalassotalea hakodatensis (isolates:1; rSTs:1)
          • Thalassotalea insulae (isolates:1; rSTs:1)
          • Thalassotalea litorea (isolates:1; rSTs:1)
          • Thalassotalea loyana (isolates:1; rSTs:1)
          • Thalassotalea mangrovi (isolates:1; rSTs:1)
          • Thalassotalea marina (isolates:1; rSTs:1)
          • Thalassotalea nanhaiensis (isolates:1; rSTs:1)
          • Thalassotalea piscium (isolates:3; rSTs:1)
          • Thalassotalea ponticola (isolates:1; rSTs:1)
          • Thalassotalea profundi (isolates:1; rSTs:1)
          • Thalassotalea psychrophila (isolates:1; rSTs:1)
          • Thalassotalea sediminis (isolates:1; rSTs:1)
          • Thalassotalea sp. (isolates:9; rSTs:9 tree)
      • Echinimonadaceae (isolates:5; rSTs:4 tree)
        • Echinimonas (isolates:1; rSTs:1)
          • Echinimonas agarilytica (isolates:1; rSTs:1)
        • Neiella (isolates:4; rSTs:3 tree)
          • Neiella holothuriorum (isolates:1; rSTs:1)
          • Neiella litorisoli (isolates:1; rSTs:1)
          • Neiella marina (isolates:2; rSTs:1)
      • Ferrimonadaceae (isolates:28; rSTs:24 tree)
        • Ferrimonas (isolates:23; rSTs:21 tree)
          • Ferrimonas aestuarii (isolates:1; rSTs:1)
          • Ferrimonas balearica (isolates:10; rSTs:9 tree)
          • Ferrimonas futtsuensis (isolates:1; rSTs:1)
          • Ferrimonas gelatinilytica (isolates:1; rSTs:1)
          • Ferrimonas kyonanensis (isolates:1; rSTs:1)
          • Ferrimonas lipolytica (isolates:1; rSTs:1)
          • Ferrimonas marina (isolates:2; rSTs:1)
          • Ferrimonas pelagia (isolates:1; rSTs:1)
          • Ferrimonas sediminicola (isolates:1; rSTs:1)
          • Ferrimonas sediminum (isolates:1; rSTs:1)
          • Ferrimonas senticii (isolates:1; rSTs:1)
          • Ferrimonas sp. (isolates:2; rSTs:2)
        • Paraferrimonas (isolates:5; rSTs:3 tree)
          • Paraferrimonas haliotis (isolates:3; rSTs:2)
          • Paraferrimonas sedimenticola (isolates:2; rSTs:1)
      • Idiomarinaceae (isolates:90; rSTs:75 tree)
        • Aliidiomarina (isolates:14; rSTs:13 tree)
          • Aliidiomarina celeris (isolates:1; rSTs:1)
          • Aliidiomarina halalkaliphila (isolates:1; rSTs:1)
          • Aliidiomarina haloalkalitolerans (isolates:1; rSTs:1)
          • Aliidiomarina indica (isolates:1; rSTs:1)
          • Aliidiomarina iranensis (isolates:1; rSTs:1)
          • Aliidiomarina maris (isolates:2; rSTs:1)
          • Aliidiomarina minuta (isolates:1; rSTs:1)
          • Aliidiomarina quisquiliarum (isolates:1; rSTs:1)
          • Aliidiomarina sanyensis (isolates:1; rSTs:1)
          • Aliidiomarina sedimenti (isolates:1; rSTs:1)
          • Aliidiomarina shirensis (isolates:1; rSTs:1)
          • Aliidiomarina soli (isolates:1; rSTs:1)
          • Aliidiomarina taiwanensis (isolates:1; rSTs:1)
        • Idiomarina (isolates:40; rSTs:32 tree)
          • Idiomarina abyssalis (isolates:8; rSTs:5 tree)
          • Idiomarina aquatica (isolates:1; rSTs:1)
          • Idiomarina baltica (isolates:1)
          • Idiomarina fontislapidosi (isolates:2; rSTs:1)
          • Idiomarina loihiensis (isolates:7; rSTs:4 tree)
          • Idiomarina piscisalsi (isolates:1; rSTs:1)
          • Idiomarina ramblicola (isolates:1; rSTs:1)
          • Idiomarina rhizosphaerae (isolates:1; rSTs:1)
          • Idiomarina seosinensis (isolates:1; rSTs:1)
          • Idiomarina sp. (isolates:13; rSTs:14 tree)
          • Idiomarina tyrosinivorans (isolates:1; rSTs:1)
          • Idiomarina xiamenensis (isolates:1; rSTs:1)
          • Idiomarina zobellii (isolates:2; rSTs:1)
        • Pseudidiomarina (isolates:36; rSTs:30 tree)
          • Pseudidiomarina aestuarii (isolates:1; rSTs:1)
          • Pseudidiomarina andamanensis (isolates:2; rSTs:1)
          • Pseudidiomarina aquimaris (isolates:1; rSTs:1)
          • Pseudidiomarina atlantica (isolates:1; rSTs:1)
          • Pseudidiomarina donghaiensis (isolates:2; rSTs:1)
          • Pseudidiomarina fusca (isolates:1; rSTs:1)
          • Pseudidiomarina gelatinasegens (isolates:1; rSTs:1)
          • Pseudidiomarina halophila (isolates:1; rSTs:1)
          • Pseudidiomarina homiensis (isolates:2; rSTs:2)
          • Pseudidiomarina indica (isolates:1; rSTs:1)
          • Pseudidiomarina insulisalsae (isolates:1; rSTs:1)
          • Pseudidiomarina mangrovi (isolates:1; rSTs:1)
          • Pseudidiomarina marina (isolates:1; rSTs:1)
          • Pseudidiomarina maritima (isolates:1; rSTs:1)
          • Pseudidiomarina piscicola (isolates:1; rSTs:1)
          • Pseudidiomarina planktonica (isolates:2; rSTs:1)
          • Pseudidiomarina salinarum (isolates:2; rSTs:1)
          • Pseudidiomarina sediminum (isolates:3; rSTs:2)
          • Pseudidiomarina sp. (isolates:1; rSTs:1 tree)
          • Pseudidiomarina tainanensis (isolates:1; rSTs:1)
          • Pseudidiomarina taiwanensis (isolates:1; rSTs:1)
          • Pseudidiomarina terrestris (isolates:6; rSTs:6 tree)
          • Pseudidiomarina woesei (isolates:2; rSTs:1)
      • Moritellaceae (isolates:31; rSTs:18 tree)
        • Moritella (isolates:31; rSTs:18 tree)
          • Moritella dasanensis (isolates:2; rSTs:1)
          • Moritella marina (isolates:3; rSTs:1)
          • Moritella sp. (isolates:9; rSTs:7 tree)
          • Moritella viscosa (isolates:16; rSTs:8 tree)
          • Moritella yayanosii (isolates:1; rSTs:1)
      • Pseudoalteromonadaceae (isolates:638; rSTs:483 tree)
        • Algicola (isolates:1; rSTs:1)
          • Algicola sagamiensis (isolates:1; rSTs:1)
        • Flocculibacter (isolates:1; rSTs:1)
          • Flocculibacter collagenilyticus (isolates:1; rSTs:1)
        • Pseudoalteromonas (isolates:627; rSTs:473 tree)
          • Pseudoalteromonas agarivorans (isolates:2; rSTs:2)
          • Pseudoalteromonas aliena (isolates:3; rSTs:3 tree)
          • Pseudoalteromonas amylolytica (isolates:1; rSTs:1)
          • Pseudoalteromonas arabiensis (isolates:1; rSTs:2)
          • Pseudoalteromonas arctica (isolates:8; rSTs:7 tree)
          • Pseudoalteromonas atlantica (isolates:1; rSTs:1)
          • Pseudoalteromonas aurantia (isolates:1; rSTs:1)
          • Pseudoalteromonas byunsanensis (isolates:1; rSTs:1)
          • Pseudoalteromonas caenipelagi (isolates:1; rSTs:1)
          • Pseudoalteromonas carrageenovora (isolates:13; rSTs:9 tree)
          • Pseudoalteromonas citrea (isolates:3; rSTs:2)
          • Pseudoalteromonas denitrificans (isolates:1; rSTs:1)
          • Pseudoalteromonas distincta (isolates:6; rSTs:5 tree)
          • Pseudoalteromonas donghaensis (isolates:1; rSTs:1)
          • Pseudoalteromonas espejiana (isolates:2; rSTs:1)
          • Pseudoalteromonas flavipulchra (isolates:5; rSTs:3 tree)
          • Pseudoalteromonas fuliginea (isolates:7; rSTs:5 tree)
          • Pseudoalteromonas galatheae (isolates:3; rSTs:2)
          • Pseudoalteromonas gelatinilytica (isolates:1; rSTs:1)
          • Pseudoalteromonas issachenkonii (isolates:2; rSTs:1)
          • Pseudoalteromonas lipolytica (isolates:4; rSTs:3 tree)
          • Pseudoalteromonas luteoviolacea (isolates:25; rSTs:18 tree)
          • Pseudoalteromonas maricaloris (isolates:2; rSTs:1)
          • Pseudoalteromonas marina (isolates:5; rSTs:5 tree)
          • Pseudoalteromonas mariniglutinosa (isolates:2; rSTs:1)
          • Pseudoalteromonas neustonica (isolates:2; rSTs:2)
          • Pseudoalteromonas nigrifaciens (isolates:5; rSTs:3 tree)
          • Pseudoalteromonas ostreae (isolates:3; rSTs:1)
          • Pseudoalteromonas peptidolytica (isolates:4; rSTs:2)
          • Pseudoalteromonas phenolica (isolates:8; rSTs:6 tree)
          • Pseudoalteromonas piratica (isolates:1; rSTs:1)
          • Pseudoalteromonas piscicida (isolates:16; rSTs:6 tree)
          • Pseudoalteromonas profundi (isolates:2; rSTs:2)
          • Pseudoalteromonas prydzensis (isolates:3; rSTs:2)
          • Pseudoalteromonas rhizosphaerae (isolates:3; rSTs:3 tree)
          • Pseudoalteromonas rubra (isolates:13; rSTs:9 tree)
          • Pseudoalteromonas ruthenica (isolates:14; rSTs:7 tree)
          • Pseudoalteromonas shioyasakiensis (isolates:14; rSTs:10 tree)
          • Pseudoalteromonas sp. (isolates:416; rSTs:323 tree)
          • Pseudoalteromonas spiralis (isolates:1; rSTs:1)
          • Pseudoalteromonas spongiae (isolates:4; rSTs:4 tree)
          • Pseudoalteromonas telluritireducens (isolates:1; rSTs:1)
          • Pseudoalteromonas tetraodonis (isolates:5; rSTs:3 tree)
          • Pseudoalteromonas translucida (isolates:1; rSTs:1)
          • Pseudoalteromonas tunicata (isolates:4; rSTs:2)
          • Pseudoalteromonas ulvae (isolates:2; rSTs:2)
          • Pseudoalteromonas undina (isolates:3; rSTs:3 tree)
          • Pseudoalteromonas xiamenensis (isolates:1; rSTs:1)
        • Psychrosphaera (isolates:9; rSTs:8 tree)
          • Psychrosphaera aestuarii (isolates:1; rSTs:1)
          • Psychrosphaera aquimarina (isolates:1; rSTs:1)
          • Psychrosphaera haliotis (isolates:2; rSTs:2)
          • Psychrosphaera saromensis (isolates:3; rSTs:1)
          • Psychrosphaera sp. (isolates:1; rSTs:2)
          • Psychrosphaera ytuae (isolates:1; rSTs:1)
      • Psychromonadaceae (isolates:28; rSTs:24 tree)
        • Corallincola (isolates:4; rSTs:4 tree)
          • Corallincola holothuriorum (isolates:1; rSTs:1)
          • Corallincola luteus (isolates:1; rSTs:1)
          • Corallincola platygyrae (isolates:1; rSTs:1)
          • Corallincola spongiicola (isolates:1; rSTs:1)
        • Psychromonas (isolates:24; rSTs:20 tree)
          • Psychromonas antarctica (isolates:1; rSTs:1)
          • Psychromonas aquatilis (isolates:1; rSTs:1)
          • Psychromonas aquimarina (isolates:1; rSTs:1)
          • Psychromonas arctica (isolates:2; rSTs:2 tree)
          • Psychromonas hadalis (isolates:1; rSTs:1)
          • Psychromonas ingrahamii (isolates:1; rSTs:1)
          • Psychromonas marina (isolates:1; rSTs:1)
          • Psychromonas ossibalaenae (isolates:1; rSTs:1)
          • Psychromonas sp. (isolates:15; rSTs:11 tree)
      • Shewanellaceae (isolates:737; rSTs:575 tree)
        • Parashewanella (isolates:6; rSTs:4 tree)
          • Parashewanella curva (isolates:1; rSTs:1)
          • Parashewanella hymeniacidonis (isolates:1; rSTs:1)
          • Parashewanella spongiae (isolates:3; rSTs:1)
          • Parashewanella tropica (isolates:1; rSTs:1)
        • Shewanella (isolates:731; rSTs:571 tree)
          • Shewanella abyssi (isolates:1; rSTs:1)
          • Shewanella acanthi (isolates:1; rSTs:1)
          • Shewanella aegiceratis (isolates:1; rSTs:1)
          • Shewanella aestuarii (isolates:2; rSTs:1)
          • Shewanella algae (isolates:224; rSTs:178 tree)
          • Shewanella algicola (isolates:3; rSTs:2)
          • Shewanella algidipiscicola (isolates:3; rSTs:3 tree)
          • Shewanella alkalitolerans (isolates:1; rSTs:1)
          • Shewanella amazonensis (isolates:2; rSTs:1)
          • Shewanella aquimarina (isolates:1; rSTs:1)
          • Shewanella atlantica (isolates:1; rSTs:1)
          • Shewanella avicenniae (isolates:1; rSTs:1)
          • Shewanella baltica (isolates:54; rSTs:33 tree)
          • Shewanella basaltis (isolates:1; rSTs:1)
          • Shewanella benthica (isolates:3; rSTs:1)
          • Shewanella bicestrii (isolates:1; rSTs:1)
          • Shewanella canadensis (isolates:1; rSTs:1)
          • Shewanella carassii (isolates:3; rSTs:2)
          • Shewanella chilikensis (isolates:14; rSTs:10 tree)
          • Shewanella colwelliana (isolates:5; rSTs:5 tree)
          • Shewanella corallii (isolates:1; rSTs:1)
          • Shewanella cyperi (isolates:2; rSTs:2)
          • Shewanella decolorationis (isolates:4; rSTs:4 tree)
          • Shewanella denitrificans (isolates:1; rSTs:1)
          • Shewanella dokdonensis (isolates:2; rSTs:2)
          • Shewanella donghaensis (isolates:1; rSTs:1)
          • Shewanella electrica (isolates:1; rSTs:1)
          • Shewanella electrodiphila (isolates:1; rSTs:1)
          • Shewanella eurypsychrophilus (isolates:1; rSTs:1)
          • Shewanella fidelis (isolates:6; rSTs:2)
          • Shewanella fodinae (isolates:3; rSTs:2)
          • Shewanella frigidimarina (isolates:5; rSTs:5 tree)
          • Shewanella gaetbuli (isolates:1; rSTs:1)
          • Shewanella gelidii (isolates:2; rSTs:2)
          • Shewanella gelidimarina (isolates:1; rSTs:1)
          • Shewanella glacialimarina (isolates:1; rSTs:1)
          • Shewanella glacialipiscicola (isolates:5; rSTs:2)
          • Shewanella goraebulensis (isolates:1; rSTs:1)
          • Shewanella hafniensis (isolates:2; rSTs:1)
          • Shewanella halifaxensis (isolates:1; rSTs:1)
          • Shewanella halotolerans (isolates:1; rSTs:1)
          • Shewanella hanedai (isolates:2; rSTs:1)
          • Shewanella holmiensis (isolates:1; rSTs:1)
          • Shewanella indica (isolates:15; rSTs:13 tree)
          • Shewanella insulae (isolates:5; rSTs:5 tree)
          • Shewanella intestini (isolates:1; rSTs:1)
          • Shewanella inventionis (isolates:3; rSTs:3 tree)
          • Shewanella japonica (isolates:3; rSTs:3 tree)
          • Shewanella jiangmenensis (isolates:1; rSTs:1)
          • Shewanella kaireitica (isolates:1; rSTs:1)
          • Shewanella khirikhana (isolates:2; rSTs:2)
          • Shewanella litoralis (isolates:2; rSTs:1)
          • Shewanella litorisediminis (isolates:2; rSTs:1)
          • Shewanella livingstonensis (isolates:1; rSTs:1)
          • Shewanella loihica (isolates:1; rSTs:1)
          • Shewanella mangrovi (isolates:1; rSTs:1)
          • Shewanella mangrovisoli (isolates:3; rSTs:3 tree)
          • Shewanella marina (isolates:1; rSTs:1)
          • Shewanella marinintestina (isolates:1; rSTs:1)
          • Shewanella marisflavi (isolates:3; rSTs:3 tree)
          • Shewanella maritima (isolates:1; rSTs:1)
          • Shewanella mesophila (isolates:1; rSTs:1)
          • Shewanella metallivivens (isolates:2; rSTs:2)
          • Shewanella morhuae (isolates:4; rSTs:3 tree)
          • Shewanella nanhaiensis (isolates:1; rSTs:1)
          • Shewanella olleyana (isolates:1; rSTs:1)
          • Shewanella oncorhynchi (isolates:3; rSTs:3 tree)
          • Shewanella oneidensis (isolates:4; rSTs:1)
          • Shewanella pealeana (isolates:1; rSTs:1)
          • Shewanella phaeophyticola (isolates:1)
          • Shewanella piezotolerans (isolates:1; rSTs:1)
          • Shewanella pneumatophori (isolates:1; rSTs:1)
          • Shewanella polaris (isolates:2; rSTs:2)
          • Shewanella profunda (isolates:1; rSTs:1)
          • Shewanella psychromarinicola (isolates:3; rSTs:1)
          • Shewanella psychrophila (isolates:1; rSTs:1)
          • Shewanella psychropiezotolerans (isolates:1; rSTs:1)
          • Shewanella psychrotolerans (isolates:1; rSTs:1)
          • Shewanella putrefaciens (isolates:14; rSTs:11 tree)
          • Shewanella rhizosphaerae (isolates:1; rSTs:1)
          • Shewanella sairae (isolates:2; rSTs:1)
          • Shewanella salipaludis (isolates:1; rSTs:1)
          • Shewanella saliphila (isolates:2; rSTs:1)
          • Shewanella schlegeliana (isolates:3; rSTs:1)
          • Shewanella sedimentimangrovi (isolates:1; rSTs:1)
          • Shewanella sediminis (isolates:1; rSTs:1)
          • Shewanella seohaensis (isolates:2; rSTs:2)
          • Shewanella septentrionalis (isolates:1; rSTs:1)
          • Shewanella sp. (isolates:170; rSTs:141 tree)
          • Shewanella spartinae (isolates:1; rSTs:1)
          • Shewanella subflava (isolates:1; rSTs:1)
          • Shewanella submarina (isolates:1; rSTs:1)
          • Shewanella surugensis (isolates:1; rSTs:1)
          • Shewanella ulleungensis (isolates:2; rSTs:2)
          • Shewanella vesiculosa (isolates:3; rSTs:2)
          • Shewanella violacea (isolates:1; rSTs:1)
          • Shewanella waksmanii (isolates:1; rSTs:1)
          • Shewanella woodyi (isolates:2; rSTs:2)
          • Shewanella xiamenensis (isolates:72; rSTs:47 tree)
          • Shewanella yunxiaonensis (isolates:1; rSTs:1)
          • Shewanella zhangzhouensis (isolates:1; rSTs:1)
          • Shewanella zhuhaiensis (isolates:1; rSTs:1)
    • Arenicellales (isolates:3; rSTs:2)
      • Arenicellaceae (isolates:2; rSTs:2)
        • Arenicella (isolates:2; rSTs:2)
          • Arenicella chitinivorans (isolates:1; rSTs:1)
          • Arenicella xantha (isolates:1; rSTs:1)
      • Candidatus Poriferihabitaceae (isolates:1)
        • Candidatus Spongiihabitans (isolates:1)
          • Candidatus Spongiihabitans thiooxidans (isolates:1)
    • Candidatus Berkiellales (isolates:2; rSTs:2)
      • Candidatus Berkiellaceae (isolates:2; rSTs:2)
        • Candidatus Berkiella (isolates:2; rSTs:2)
          • Candidatus Berkiella aquae (isolates:1; rSTs:1)
          • Candidatus Berkiella cookevillensis (isolates:1; rSTs:1)
    • Candidatus Comchoanobacterales (isolates:2)
      • Candidatus Comchoanobacteraceae (isolates:2)
        • Candidatus Comchoanobacter (isolates:1)
          • Candidatus Comchoanobacter bicostacola (isolates:1)
        • Candidatus Synchoanobacter (isolates:1)
          • Candidatus Synchoanobacter obligatus (isolates:1)
    • Cardiobacteriales (isolates:112; rSTs:89 tree)
      • Cardiobacteriaceae (isolates:65; rSTs:54 tree)
        • Cardiobacterium (isolates:10; rSTs:6 tree)
          • Cardiobacterium hominis (isolates:6; rSTs:3 tree)
          • Cardiobacterium sp. (isolates:1; rSTs:1)
          • Cardiobacterium valvarum (isolates:3; rSTs:2)
        • Dichelobacter (isolates:51; rSTs:45 tree)
          • Dichelobacter nodosus (isolates:51; rSTs:45 tree)
        • Rappaport (isolates:1; rSTs:1)
          • Rappaport israeli (isolates:1; rSTs:1)
        • Suttonella (isolates:3; rSTs:2)
          • Suttonella indologenes (isolates:1; rSTs:1)
          • Suttonella ornithocola (isolates:2; rSTs:1)
      • Ignatzschineriaceae (isolates:46; rSTs:34 tree)
        • Ignatzschineria (isolates:14; rSTs:9 tree)
          • Ignatzschineria cameli (isolates:5; rSTs:3 tree)
          • Ignatzschineria indica (isolates:3; rSTs:2)
          • Ignatzschineria larvae (isolates:2; rSTs:1)
          • Ignatzschineria rhizosphaerae (isolates:1; rSTs:1)
          • Ignatzschineria sp. (isolates:1; rSTs:1)
          • Ignatzschineria ureiclastica (isolates:2; rSTs:1)
        • Wohlfahrtiimonas (isolates:32; rSTs:25 tree)
          • Wohlfahrtiimonas chitiniclastica (isolates:28; rSTs:22 tree)
          • Wohlfahrtiimonas larvae (isolates:2; rSTs:1)
          • Wohlfahrtiimonas populi (isolates:1; rSTs:1)
          • Wohlfahrtiimonas sp. (isolates:1; rSTs:1)
      • Ostreibacteriaceae (isolates:1; rSTs:1)
        • Ostreibacterium (isolates:1; rSTs:1)
          • Ostreibacterium oceani (isolates:1; rSTs:1)
    • Cellvibrionales (isolates:202; rSTs:180 tree)
      • Cellvibrionaceae (isolates:83; rSTs:73 tree)
        • Aestuariicella (isolates:2; rSTs:2)
          • Aestuariicella albida (isolates:1; rSTs:1)
          • Aestuariicella hydrocarbonica (isolates:1; rSTs:1)
        • Agaribacterium (isolates:1; rSTs:1)
          • Agaribacterium haliotis (isolates:1; rSTs:1)
        • Agarilytica (isolates:1; rSTs:1)
          • Agarilytica rhodophyticola (isolates:1; rSTs:1)
        • Candidatus Endobugula (isolates:1; rSTs:1)
          • Candidatus Endobugula sertula (isolates:1; rSTs:1)
        • Cellvibrio (isolates:19; rSTs:16 tree)
          • Cellvibrio fibrivorans (isolates:1; rSTs:1)
          • Cellvibrio fontiphilus (isolates:1; rSTs:1)
          • Cellvibrio japonicus (isolates:4; rSTs:1)
          • Cellvibrio mixtus (isolates:1; rSTs:1)
          • Cellvibrio polysaccharolyticus (isolates:1; rSTs:1)
          • Cellvibrio sp. (isolates:10; rSTs:10 tree)
          • Cellvibrio zantedeschiae (isolates:1; rSTs:1)
        • Exilibacterium (isolates:1; rSTs:1)
          • Exilibacterium tricleocarpae (isolates:1; rSTs:1)
        • Gilvimarinus (isolates:9; rSTs:9 tree)
          • Gilvimarinus agarilyticus (isolates:1; rSTs:1)
          • Gilvimarinus chinensis (isolates:1; rSTs:1)
          • Gilvimarinus polysaccharolyticus (isolates:1; rSTs:1)
          • Gilvimarinus sp. (isolates:5; rSTs:5 tree)
          • Gilvimarinus xylanilyticus (isolates:1; rSTs:1)
        • Marinagarivorans (isolates:3; rSTs:3 tree)
          • Marinagarivorans algicola (isolates:2; rSTs:2)
          • Marinagarivorans cellulosilyticus (isolates:1; rSTs:1)
        • Marinibactrum (isolates:2; rSTs:1)
          • Marinibactrum halimedae (isolates:2; rSTs:1)
        • Marinimicrobium (isolates:7; rSTs:7 tree)
          • Marinimicrobium agarilyticum (isolates:1; rSTs:1)
          • Marinimicrobium alkaliphilum (isolates:1; rSTs:1)
          • Marinimicrobium koreense (isolates:1; rSTs:1)
          • Marinimicrobium locisalis (isolates:1; rSTs:1)
          • Marinimicrobium sp. (isolates:3; rSTs:3 tree)
        • Pseudomaricurvus (isolates:2; rSTs:2)
          • Pseudomaricurvus alcaniphilus (isolates:1; rSTs:1)
          • Pseudomaricurvus alkylphenolicus (isolates:1; rSTs:1)
        • Pseudoteredinibacter (isolates:4; rSTs:2)
          • Pseudoteredinibacter isoporae (isolates:4; rSTs:2)
        • Saccharophagus (isolates:5; rSTs:4 tree)
          • Saccharophagus degradans (isolates:5; rSTs:4 tree)
        • Sessilibacter (isolates:2; rSTs:2)
          • Sessilibacter corallicola (isolates:2; rSTs:2)
        • Simiduia (isolates:5; rSTs:4 tree)
          • Simiduia aestuariiviva (isolates:1; rSTs:1)
          • Simiduia agarivorans (isolates:2; rSTs:1)
          • Simiduia curdlanivorans (isolates:1; rSTs:1)
          • Simiduia sp. (isolates:1; rSTs:1)
        • Teredinibacter (isolates:18; rSTs:16 tree)
          • Teredinibacter franksiae (isolates:1; rSTs:1)
          • Teredinibacter haidensis (isolates:1; rSTs:1)
          • Teredinibacter purpureus (isolates:2; rSTs:1)
          • Teredinibacter turnerae (isolates:13; rSTs:12 tree)
          • Teredinibacter waterburyi (isolates:1; rSTs:1)
        • Umboniibacter (isolates:1; rSTs:1)
          • Umboniibacter marinipuniceus (isolates:1; rSTs:1)
      • Halieaceae (isolates:29; rSTs:25 tree)
        • Aequoribacter (isolates:2; rSTs:1)
          • Aequoribacter fuscus (isolates:2; rSTs:1)
        • Candidatus Paraluminiphilus (isolates:1; rSTs:1)
          • Candidatus Paraluminiphilus aquimaris (isolates:1; rSTs:1)
        • Chromatocurvus (isolates:2; rSTs:1)
          • Chromatocurvus halotolerans (isolates:2; rSTs:1)
        • Congregibacter (isolates:1; rSTs:1)
          • Congregibacter litoralis (isolates:1; rSTs:1)
        • Haliea (isolates:2; rSTs:2)
          • Haliea alexandrii (isolates:1; rSTs:1)
          • Haliea salexigens (isolates:1; rSTs:1)
        • Halioglobus (isolates:6; rSTs:4 tree)
          • Halioglobus japonicus (isolates:3; rSTs:1)
          • Halioglobus maricola (isolates:1; rSTs:1)
          • Halioglobus pacificus (isolates:1; rSTs:1)
          • Halioglobus sp. (isolates:1; rSTs:1)
        • Kineobactrum (isolates:2; rSTs:2)
          • Kineobactrum salinum (isolates:1; rSTs:1)
          • Kineobactrum sediminis (isolates:1; rSTs:1)
        • Luminiphilus (isolates:1; rSTs:1)
          • Luminiphilus syltensis (isolates:1; rSTs:1)
        • Mangrovimicrobium (isolates:1; rSTs:1)
          • Mangrovimicrobium sediminis (isolates:1; rSTs:1)
        • Parahaliea (isolates:4; rSTs:4 tree)
          • Parahaliea aestuarii (isolates:1; rSTs:1)
          • Parahaliea maris (isolates:1; rSTs:1)
          • Parahaliea mediterranea (isolates:2; rSTs:2)
        • Pseudohaliea (isolates:1; rSTs:1)
          • Pseudohaliea rubra (isolates:1; rSTs:1)
        • Pseudohalioglobus (isolates:2; rSTs:2)
          • Pseudohalioglobus lutimaris (isolates:1; rSTs:1)
          • Pseudohalioglobus sediminis (isolates:1; rSTs:1)
        • Sediminihaliea (isolates:1; rSTs:1)
          • Sediminihaliea albiluteola (isolates:1; rSTs:1)
        • Seongchinamella (isolates:3; rSTs:3 tree)
          • Candidatus Seongchinamella marina (isolates:1; rSTs:1)
          • Seongchinamella sediminis (isolates:1; rSTs:1)
          • Seongchinamella unica (isolates:1; rSTs:1)
      • Microbulbiferaceae (isolates:68; rSTs:63 tree)
        • Microbulbifer (isolates:68; rSTs:63 tree)
          • Microbulbifer aestuariivivens (isolates:1; rSTs:1)
          • Microbulbifer agarilyticus (isolates:6; rSTs:6 tree)
          • Microbulbifer aggregans (isolates:1; rSTs:1)
          • Microbulbifer bruguierae (isolates:1; rSTs:1)
          • Microbulbifer celer (isolates:2; rSTs:1)
          • Microbulbifer donghaiensis (isolates:1; rSTs:1)
          • Microbulbifer elongatus (isolates:1; rSTs:1)
          • Microbulbifer flavimaris (isolates:1; rSTs:1)
          • Microbulbifer guangxiensis (isolates:1; rSTs:1)
          • Microbulbifer hainanensis (isolates:1; rSTs:1)
          • Microbulbifer halophilus (isolates:1; rSTs:1)
          • Microbulbifer harenosus (isolates:1; rSTs:1)
          • Microbulbifer hydrolyticus (isolates:2; rSTs:1)
          • Microbulbifer litoralis (isolates:1; rSTs:1)
          • Microbulbifer magnicolonia (isolates:1; rSTs:1)
          • Microbulbifer mangrovi (isolates:1; rSTs:1)
          • Microbulbifer marinus (isolates:1; rSTs:1)
          • Microbulbifer okhotskensis (isolates:1; rSTs:1)
          • Microbulbifer pacificus (isolates:1; rSTs:1)
          • Microbulbifer rhizosphaerae (isolates:1; rSTs:1)
          • Microbulbifer salipaludis (isolates:1; rSTs:1)
          • Microbulbifer sediminum (isolates:1; rSTs:1)
          • Microbulbifer sp. (isolates:22; rSTs:20 tree)
          • Microbulbifer taiwanensis (isolates:1; rSTs:1)
          • Microbulbifer thermotolerans (isolates:11; rSTs:10 tree)
          • Microbulbifer variabilis (isolates:3; rSTs:3 tree)
          • Microbulbifer yueqingensis (isolates:1; rSTs:1)
          • Microbulbifer zhoushanensis (isolates:1; rSTs:1)
      • Porticoccaceae (isolates:1; rSTs:1)
        • Porticoccus (isolates:1; rSTs:1)
          • Porticoccus hydrocarbonoclasticus (isolates:1; rSTs:1)
      • Spongiibacteraceae (isolates:21; rSTs:18 tree)
        • Dasania (isolates:3; rSTs:2)
          • Dasania marina (isolates:1; rSTs:1)
          • Dasania phycosphaerae (isolates:2; rSTs:1)
        • Oceanicoccus (isolates:1; rSTs:1)
          • Oceanicoccus sagamiensis (isolates:1; rSTs:1)
        • Sinobacterium (isolates:1; rSTs:1)
          • Sinobacterium caligoides (isolates:1; rSTs:1)
        • Spongiibacter (isolates:8; rSTs:7 tree)
          • Spongiibacter marinus (isolates:2; rSTs:2)
          • Spongiibacter nanhainus (isolates:1; rSTs:1)
          • Spongiibacter pelagi (isolates:1; rSTs:1)
          • Spongiibacter taiwanensis (isolates:1; rSTs:1)
          • Spongiibacter thalassae (isolates:1; rSTs:1)
          • Spongiibacter tropicus (isolates:2; rSTs:1)
        • Zhongshania (isolates:8; rSTs:7 tree)
          • Zhongshania aliphaticivorans (isolates:1; rSTs:1)
          • Zhongshania antarctica (isolates:2; rSTs:1)
          • Zhongshania aquimaris (isolates:1; rSTs:1)
          • Zhongshania borealis (isolates:1; rSTs:1)
          • Zhongshania marina (isolates:2; rSTs:2)
          • Zhongshania sp. (isolates:1; rSTs:1)
    • Chromatiales (isolates:305; rSTs:256 tree)
      • Chromatiaceae (isolates:116; rSTs:100 tree)
        • Allochromatium (isolates:7; rSTs:6 tree)
          • Allochromatium humboldtianum (isolates:1; rSTs:1)
          • Allochromatium palmeri (isolates:1; rSTs:1)
          • Allochromatium tepidum (isolates:1; rSTs:1)
          • Allochromatium vinosum (isolates:3; rSTs:2)
          • Allochromatium warmingii (isolates:1; rSTs:1)
        • Arsukibacterium (isolates:5; rSTs:5 tree)
          • Arsukibacterium ikkense (isolates:1; rSTs:1)
          • Arsukibacterium indicum (isolates:1; rSTs:1)
          • Arsukibacterium perlucidum (isolates:1; rSTs:1)
          • Arsukibacterium sp. (isolates:1; rSTs:1)
          • Arsukibacterium tuosuense (isolates:1; rSTs:1)
        • Caldichromatium (isolates:1; rSTs:1)
          • Caldichromatium japonicum (isolates:1; rSTs:1)
        • Candidatus Nitrosacidococcus (isolates:2; rSTs:2)
          • Candidatus Nitrosacidococcus sp. (isolates:1; rSTs:1)
          • Candidatus Nitrosacidococcus tergens (isolates:1; rSTs:1)
        • Candidatus Nitrosoglobus (isolates:1; rSTs:1)
          • Candidatus Nitrosoglobus terrae (isolates:1; rSTs:1)
        • Candidatus Tenderia (isolates:1; rSTs:1)
          • Candidatus Tenderia electrophaga (isolates:1; rSTs:1)
        • Candidatus Thiosymbion (isolates:4; rSTs:2)
          • Candidatus Thiosymbion oneisti (isolates:4; rSTs:2)
        • Halochromatium (isolates:3; rSTs:3 tree)
          • Halochromatium glycolicum (isolates:1; rSTs:1)
          • Halochromatium roseum (isolates:1; rSTs:1)
          • Halochromatium salexigens (isolates:1; rSTs:1)
        • Imhoffiella (isolates:1; rSTs:1)
          • Imhoffiella purpurea (isolates:1; rSTs:1)
        • Lamprobacter (isolates:2; rSTs:2)
          • Lamprobacter modestohalophilus (isolates:2; rSTs:2)
        • Lamprocystis (isolates:1; rSTs:1)
          • Lamprocystis purpurea (isolates:1; rSTs:1)
        • Marichromatium (isolates:7; rSTs:7 tree)
          • Marichromatium bheemlicum (isolates:1; rSTs:1)
          • Marichromatium gracile (isolates:3; rSTs:3 tree)
          • Marichromatium purpuratum (isolates:1; rSTs:1)
          • Marichromatium sp. (isolates:2; rSTs:2)
        • Nitrosococcus (isolates:9; rSTs:5 tree)
          • Nitrosococcus halophilus (isolates:1; rSTs:1)
          • Nitrosococcus oceani (isolates:5; rSTs:2)
          • Nitrosococcus wardiae (isolates:1; rSTs:1)
          • Nitrosococcus watsonii (isolates:2; rSTs:1)
        • Rhabdochromatium (isolates:1; rSTs:1)
          • Rhabdochromatium marinum (isolates:1; rSTs:1)
        • Rheinheimera (isolates:46; rSTs:38 tree)
          • Rheinheimera aquimaris (isolates:4; rSTs:2)
          • Rheinheimera baltica (isolates:4; rSTs:3 tree)
          • Rheinheimera faecalis (isolates:1; rSTs:1)
          • Rheinheimera hassiensis (isolates:1; rSTs:1)
          • Rheinheimera lutimaris (isolates:1; rSTs:1)
          • Rheinheimera mangrovi (isolates:1; rSTs:1)
          • Rheinheimera maricola (isolates:2; rSTs:1)
          • Rheinheimera mesophila (isolates:2; rSTs:1)
          • Rheinheimera metallidurans (isolates:1; rSTs:1)
          • Rheinheimera muenzenbergensis (isolates:1; rSTs:1)
          • Rheinheimera nanhaiensis (isolates:1; rSTs:1)
          • Rheinheimera oceanensis (isolates:3; rSTs:1)
          • Rheinheimera pacifica (isolates:2; rSTs:2 tree)
          • Rheinheimera pleomorphica (isolates:2; rSTs:1)
          • Rheinheimera riviphila (isolates:1; rSTs:1)
          • Rheinheimera salexigens (isolates:1; rSTs:1)
          • Rheinheimera soli (isolates:1; rSTs:1)
          • Rheinheimera sp. (isolates:13; rSTs:14 tree)
          • Rheinheimera tangshanensis (isolates:3; rSTs:2)
          • Rheinheimera texasensis (isolates:1; rSTs:1)
        • Thermochromatium (isolates:1; rSTs:1)
          • Thermochromatium tepidum (isolates:1; rSTs:1)
        • Thiobaca (isolates:1; rSTs:1)
          • Thiobaca trueperi (isolates:1; rSTs:1)
        • Thiocapsa (isolates:6; rSTs:6 tree)
          • Thiocapsa bogorovii (isolates:1; rSTs:1)
          • Thiocapsa imhoffii (isolates:1; rSTs:1)
          • Thiocapsa marina (isolates:1; rSTs:1)
          • Thiocapsa rosea (isolates:1; rSTs:1)
          • Thiocapsa roseopersicina (isolates:1; rSTs:1)
          • Thiocapsa sp. (isolates:1; rSTs:1)
        • Thiococcus (isolates:2; rSTs:2)
          • Thiococcus pfennigii (isolates:2; rSTs:2)
        • Thiocystis (isolates:3; rSTs:3 tree)
          • Thiocystis minor (isolates:1; rSTs:1)
          • Thiocystis violacea (isolates:1; rSTs:1)
          • Thiocystis violascens (isolates:1; rSTs:1)
        • Thiodictyon (isolates:1; rSTs:1)
          • Candidatus Thiodictyon syntrophicum (isolates:1; rSTs:1)
        • Thioflavicoccus (isolates:1; rSTs:1)
          • Thioflavicoccus mobilis (isolates:1; rSTs:1)
        • Thiohalocapsa (isolates:3; rSTs:3 tree)
          • Thiohalocapsa halophila (isolates:1; rSTs:1)
          • Thiohalocapsa marina (isolates:1; rSTs:1)
          • Thiohalocapsa sp. (isolates:1; rSTs:1)
        • Thiorhodococcus (isolates:3; rSTs:3 tree)
          • Thiorhodococcus drewsii (isolates:1; rSTs:1)
          • Thiorhodococcus mannitoliphagus (isolates:1; rSTs:1)
          • Thiorhodococcus minor (isolates:1; rSTs:1)
        • Thiorhodovibrio (isolates:3; rSTs:2)
          • Thiorhodovibrio frisius (isolates:2; rSTs:1)
          • Thiorhodovibrio winogradskyi (isolates:1; rSTs:1)
        • Thiospirillum (isolates:1; rSTs:1)
          • Thiospirillum jenense (isolates:1; rSTs:1)
      • Ectothiorhodospiraceae (isolates:148; rSTs:120 tree)
        • Acidihalobacter (isolates:4; rSTs:4 tree)
          • Acidihalobacter aeolianus (isolates:1; rSTs:1)
          • Acidihalobacter ferrooxydans (isolates:1; rSTs:1)
          • Acidihalobacter prosperus (isolates:1; rSTs:1)
          • Acidihalobacter yilgarnensis (isolates:1; rSTs:1)
        • Alkalilimnicola (isolates:3; rSTs:2)
          • Alkalilimnicola ehrlichii (isolates:1; rSTs:1)
          • Alkalilimnicola sp. (isolates:2; rSTs:1)
        • Alkalispirillum (isolates:1; rSTs:1)
          • Alkalispirillum mobile (isolates:1; rSTs:1)
        • Aquisalimonas (isolates:2; rSTs:2)
          • Aquisalimonas asiatica (isolates:1; rSTs:1)
          • Aquisalimonas lutea (isolates:1; rSTs:1)
        • Arhodomonas (isolates:3; rSTs:3 tree)
          • Arhodomonas aquaeolei (isolates:2; rSTs:2)
          • Arhodomonas sp. (isolates:1; rSTs:1)
        • Candidatus Macondimonas (isolates:1; rSTs:1)
          • Candidatus Macondimonas diazotrophica (isolates:1; rSTs:1)
        • Ectothiorhodosinus (isolates:2; rSTs:1)
          • Ectothiorhodosinus mongolicus (isolates:2; rSTs:1)
        • Ectothiorhodospira (isolates:19; rSTs:14 tree)
          • Ectothiorhodospira haloalkaliphila (isolates:1; rSTs:1)
          • Ectothiorhodospira lacustris (isolates:3; rSTs:1)
          • Ectothiorhodospira magna (isolates:1; rSTs:1)
          • Ectothiorhodospira marina (isolates:1; rSTs:1)
          • Ectothiorhodospira mobilis (isolates:3; rSTs:2)
          • Ectothiorhodospira shaposhnikovii (isolates:2; rSTs:2)
          • Ectothiorhodospira sp. (isolates:4; rSTs:4 tree)
          • Ectothiorhodospira variabilis (isolates:4; rSTs:2)
        • Halofilum (isolates:1; rSTs:1)
          • Halofilum ochraceum (isolates:1; rSTs:1)
        • Halorhodospira (isolates:16; rSTs:12 tree)
          • Halorhodospira abdelmalekii (isolates:1; rSTs:1)
          • Halorhodospira halochloris (isolates:4; rSTs:3 tree)
          • Halorhodospira halophila (isolates:5; rSTs:4 tree)
          • Halorhodospira neutriphila (isolates:1; rSTs:1)
          • Halorhodospira sp. (isolates:5; rSTs:3 tree)
        • Inmirania (isolates:1; rSTs:1)
          • Inmirania thermothiophila (isolates:1; rSTs:1)
        • Natronocella (isolates:1; rSTs:1)
          • Natronocella acetinitrilica (isolates:1; rSTs:1)
        • Nitrococcus (isolates:1; rSTs:1)
          • Nitrococcus mobilis (isolates:1; rSTs:1)
        • Spiribacter (isolates:13; rSTs:11 tree)
          • Spiribacter aquaticus (isolates:1; rSTs:1)
          • Spiribacter curvatus (isolates:1; rSTs:1)
          • Spiribacter halobius (isolates:2; rSTs:1)
          • Spiribacter roseus (isolates:2; rSTs:2)
          • Spiribacter salilacus (isolates:1; rSTs:1)
          • Spiribacter salinus (isolates:2; rSTs:2)
          • Spiribacter sp. (isolates:2; rSTs:2)
          • Spiribacter vilamensis (isolates:2; rSTs:1)
        • Thioalbus (isolates:1; rSTs:1)
          • Thioalbus denitrificans (isolates:1; rSTs:1)
        • Thioalkalivibrio (isolates:77; rSTs:62 tree)
          • Thioalkalivibrio denitrificans (isolates:1; rSTs:1)
          • Thioalkalivibrio halophilus (isolates:1; rSTs:1)
          • Thioalkalivibrio nitratireducens (isolates:1; rSTs:1)
          • Thioalkalivibrio paradoxus (isolates:1; rSTs:1)
          • Thioalkalivibrio sp. (isolates:67; rSTs:52 tree)
          • Thioalkalivibrio sulfidiphilus (isolates:2; rSTs:2)
          • Thioalkalivibrio thiocyanodenitrificans (isolates:1; rSTs:1)
          • Thioalkalivibrio thiocyanoxidans (isolates:1; rSTs:1)
          • Thioalkalivibrio versutus (isolates:2; rSTs:2)
        • Thiogranum (isolates:1; rSTs:1)
          • Thiogranum longum (isolates:1; rSTs:1)
        • Thiorhodospira (isolates:1; rSTs:1)
          • Thiorhodospira sibirica (isolates:1; rSTs:1)
      • Granulosicoccaceae (isolates:2; rSTs:2)
        • Granulosicoccus (isolates:1; rSTs:1)
          • Granulosicoccus antarcticus (isolates:1; rSTs:1)
        • Sulfuriflexus (isolates:1; rSTs:1)
          • Sulfuriflexus mobilis (isolates:1; rSTs:1)
      • Halothiobacillaceae (isolates:5; rSTs:3 tree)
        • Halothiobacillus (isolates:4; rSTs:2)
          • Halothiobacillus diazotrophicus (isolates:1; rSTs:1)
          • Halothiobacillus neapolitanus (isolates:3; rSTs:1)
        • Thiofaba (isolates:1; rSTs:1)
          • Thiofaba sp. (isolates:1; rSTs:1)
      • Oceanococcaceae (isolates:2; rSTs:2)
        • Abyssibacter (isolates:1; rSTs:1)
          • Abyssibacter profundi (isolates:1; rSTs:1)
        • Oceanococcus (isolates:1; rSTs:1)
          • Oceanococcus atlanticus (isolates:1; rSTs:1)
      • Sedimenticolaceae (isolates:14; rSTs:14 tree)
        • Candidatus Thiodiazotropha (isolates:7; rSTs:7 tree)
          • Candidatus Thiodiazotropha endoloripes (isolates:5; rSTs:5 tree)
          • Candidatus Thiodiazotropha endolucinida (isolates:1; rSTs:1)
          • Candidatus Thiodiazotropha sp. (isolates:1; rSTs:1)
        • Sedimenticola (isolates:5; rSTs:5 tree)
          • Sedimenticola hydrogenitrophicus (isolates:2; rSTs:2)
          • Sedimenticola selenatireducens (isolates:2; rSTs:2)
          • Sedimenticola thiotaurini (isolates:1; rSTs:1)
        • Thiolapillus (isolates:1; rSTs:1)
          • Thiolapillus brandeum (isolates:1; rSTs:1)
        • Thiosocius (isolates:1; rSTs:1)
          • Thiosocius teredinicola (isolates:1; rSTs:1)
      • Thioalkalibacteraceae (isolates:6; rSTs:5 tree)
        • Guyparkeria (isolates:6; rSTs:5 tree)
          • Guyparkeria halophila (isolates:1; rSTs:1)
          • Guyparkeria hydrothermalis (isolates:1; rSTs:1)
          • Guyparkeria sp. (isolates:4; rSTs:3 tree)
      • Wenzhouxiangellaceae (isolates:11; rSTs:9 tree)
        • Elongatibacter (isolates:1; rSTs:1)
          • Elongatibacter sediminis (isolates:1; rSTs:1)
        • Marinihelvus (isolates:1; rSTs:1)
          • Marinihelvus fidelis (isolates:1; rSTs:1)
        • Wenzhouxiangella (isolates:9; rSTs:7 tree)
          • Wenzhouxiangella limi (isolates:1; rSTs:1)
          • Wenzhouxiangella marina (isolates:2; rSTs:1)
          • Wenzhouxiangella sediminis (isolates:1; rSTs:1)
          • Wenzhouxiangella sp. (isolates:5; rSTs:4 tree)
    • Enterobacterales (isolates:189746; rSTs:47438)
      • Bruguierivoracaceae (isolates:15; rSTs:14 tree)
        • Biostraticola (isolates:1; rSTs:1)
          • Biostraticola tofi (isolates:1; rSTs:1)
        • Sodalis (isolates:14; rSTs:13 tree)
          • Candidatus Sodalis endolongispinus (isolates:1; rSTs:1)
          • Candidatus Sodalis pierantonius (isolates:1; rSTs:1)
          • Sodalis endosymbiont of Henestaris halophilus (isolates:1; rSTs:1)
          • Sodalis glossinidius (isolates:2; rSTs:2)
          • Sodalis ligni (isolates:2; rSTs:2)
          • Sodalis praecaptivus (isolates:2; rSTs:2)
          • Sodalis sp. (isolates:3; rSTs:2)
          • Sodalis-like endosymbiont of Proechinophthirus fluctus (isolates:1; rSTs:1)
          • Sodalis-like symbiont of Philaenus spumarius (isolates:1; rSTs:1)
      • Budviciaceae (isolates:30; rSTs:19 tree)
        • Budvicia (isolates:5; rSTs:3 tree)
          • Budvicia aquatica (isolates:4; rSTs:2)
          • Budvicia diplopodorum (isolates:1; rSTs:1)
        • Leminorella (isolates:9; rSTs:4 tree)
          • Leminorella grimontii (isolates:7; rSTs:3 tree)
          • Leminorella richardii (isolates:2; rSTs:1)
        • Limnobaculum (isolates:10; rSTs:7 tree)
          • Limnobaculum allomyrinae (isolates:1; rSTs:1)
          • Limnobaculum eriocheiris (isolates:1; rSTs:1)
          • Limnobaculum parvum (isolates:1; rSTs:1)
          • Limnobaculum sp. (isolates:1; rSTs:1)
          • Limnobaculum xujianqingii (isolates:4; rSTs:2)
          • Limnobaculum zhutongyuii (isolates:2; rSTs:1)
        • Pragia (isolates:6; rSTs:5 tree)
          • Pragia fontium (isolates:6; rSTs:5 tree)
      • Enterobacteriaceae (isolates:179223; rSTs:42268)
        • Atlantibacter (isolates:39; rSTs:28 tree)
          • Atlantibacter hermannii (isolates:30; rSTs:22 tree)
          • Atlantibacter sp. (isolates:1; rSTs:1)
          • Atlantibacter subterranea (isolates:8; rSTs:5 tree)
        • Buttiauxella (isolates:25; rSTs:25 tree)
          • Buttiauxella agrestis (isolates:3; rSTs:3 tree)
          • Buttiauxella brennerae (isolates:1; rSTs:1)
          • Buttiauxella ferragutiae (isolates:3; rSTs:3 tree)
          • Buttiauxella gaviniae (isolates:1; rSTs:1)
          • Buttiauxella izardii (isolates:1; rSTs:1)
          • Buttiauxella massiliensis (isolates:1; rSTs:1)
          • Buttiauxella noackiae (isolates:2; rSTs:2)
          • Buttiauxella selenatireducens (isolates:1; rSTs:1)
          • Buttiauxella sp. (isolates:11; rSTs:11 tree)
          • Buttiauxella warmboldiae (isolates:1; rSTs:1)
        • Candidatus Annandia (isolates:2; rSTs:1)
          • Candidatus Annandia adelgestsuga (isolates:1)
          • Candidatus Annandia pinicola (isolates:1; rSTs:1)
        • Candidatus Blochmanniella (isolates:27; rSTs:25 tree)
          • Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus (isolates:1; rSTs:1)
          • Blochmannia endosymbiont of Camponotus modoc (isolates:3; rSTs:3 tree)
          • Blochmannia endosymbiont of Camponotus nipponensis (isolates:1; rSTs:1)
          • Blochmannia endosymbiont of Camponotus sp. (isolates:7; rSTs:7 tree)
          • Blochmannia endosymbiont of Colobopsis nipponica (isolates:1; rSTs:1)
          • Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri (isolates:1; rSTs:1)
          • Candidatus Blochmannia ocreatus (isolates:1; rSTs:1)
          • Candidatus Blochmannia sp. (isolates:1)
          • Candidatus Blochmannia vicinus (isolates:3; rSTs:3 tree)
          • Candidatus Blochmanniella camponoti (isolates:3; rSTs:3 tree)
          • Candidatus Blochmanniella chromaiodes (isolates:1; rSTs:1)
          • Candidatus Blochmanniella floridana (isolates:1; rSTs:1)
          • Candidatus Blochmanniella pennsylvanica (isolates:2; rSTs:1)
          • Candidatus Blochmanniella vafra (isolates:1; rSTs:1)
        • Candidatus Doolittlea (isolates:1; rSTs:1)
          • Candidatus Doolittlea endobia (isolates:1; rSTs:1)
        • Candidatus Gillettellia (isolates:1; rSTs:1)
          • Candidatus Gillettellia cooleyia (isolates:1; rSTs:1)
        • Candidatus Gullanella (isolates:1; rSTs:1)
          • Candidatus Gullanella endobia (isolates:1; rSTs:1)
        • Candidatus Hamiltonella (isolates:25; rSTs:16 tree)
          • Candidatus Hamiltonella defensa (isolates:25; rSTs:16 tree)
        • Candidatus Hartigia (isolates:1; rSTs:1)
          • Candidatus Hartigia pinicola (isolates:1; rSTs:1)
        • Candidatus Hoaglandella (isolates:1; rSTs:1)
          • Candidatus Hoaglandella endobia (isolates:1; rSTs:1)
        • Candidatus Ishikawella (isolates:1; rSTs:1)
          • Candidatus Ishikawella capsulata (isolates:1; rSTs:1)
        • Candidatus Mikella (isolates:1; rSTs:1)
          • Candidatus Mikella endobia (isolates:1; rSTs:1)
        • Candidatus Moranella (isolates:2; rSTs:2)
          • Candidatus Moranella endobia (isolates:2; rSTs:2)
        • Candidatus Profftia (isolates:2; rSTs:2)
          • Candidatus Profftia lariciata (isolates:1; rSTs:1)
          • Candidatus Profftia tarda (isolates:1; rSTs:1)
        • Candidatus Purcelliella (isolates:5; rSTs:3 tree)
          • Candidatus Purcelliella pentastirinorum (isolates:5; rSTs:3 tree)
        • Candidatus Regiella (isolates:4; rSTs:2 tree)
          • Candidatus Regiella endosymbiont of Tuberolachnus salignus (isolates:1; rSTs:1)
          • Candidatus Regiella insecticola (isolates:3; rSTs:1)
        • Candidatus Riesia (isolates:6; rSTs:5 tree)
          • Candidatus Riesia pediculicola (isolates:4; rSTs:3 tree)
          • Candidatus Riesia pediculischaeffi (isolates:2; rSTs:2)
        • Candidatus Schneideria (isolates:3; rSTs:2)
          • Candidatus Schneideria nysicola (isolates:3; rSTs:2)
        • Candidatus Tachikawaea (isolates:1; rSTs:1)
          • Candidatus Tachikawaea gelatinosa (isolates:1; rSTs:1)
        • Cedecea (isolates:31; rSTs:20 tree)
          • Cedecea colo (isolates:1; rSTs:1)
          • Cedecea davisae (isolates:6; rSTs:3 tree)
          • Cedecea lapagei (isolates:1; rSTs:1)
          • Cedecea neteri (isolates:5; rSTs:3 tree)
          • Cedecea sp. (isolates:18; rSTs:12 tree)
        • Citrobacter (isolates:3189; rSTs:1168 tree)
          • Citrobacter amalonaticus (isolates:112; rSTs:61 tree)
          • Citrobacter arsenatis (isolates:2; rSTs:2)
          • Citrobacter braakii (isolates:211; rSTs:118 tree)
          • Citrobacter cronae (isolates:34; rSTs:22 tree)
          • Citrobacter enshiensis (isolates:2; rSTs:2)
          • Citrobacter europaeus (isolates:13; rSTs:11 tree)
          • Citrobacter farmeri (isolates:69; rSTs:31 tree)
          • Citrobacter freundii (isolates:1743; rSTs:414 tree)
          • Citrobacter gillenii (isolates:4; rSTs:3 tree)
          • Citrobacter koseri (isolates:271; rSTs:108 tree)
          • Citrobacter meridianamericanus (isolates:1; rSTs:1)
          • Citrobacter murliniae (isolates:1; rSTs:1)
          • Citrobacter pasteurii (isolates:3; rSTs:2)
          • Citrobacter portucalensis (isolates:254; rSTs:127 tree)
          • Citrobacter rodentium (isolates:11; rSTs:1)
          • Citrobacter sedlakii (isolates:40; rSTs:24 tree)
          • Citrobacter sp. (isolates:361; rSTs:198 tree)
          • Citrobacter telavivensis (isolates:1; rSTs:1)
          • Citrobacter tructae (isolates:1; rSTs:1)
          • Citrobacter werkmanii (isolates:28; rSTs:21 tree)
          • Citrobacter youngae (isolates:27; rSTs:19 tree)
        • Cronobacter (isolates:1494; rSTs:479 tree)
          • Cronobacter condimenti (isolates:3; rSTs:1)
          • Cronobacter dublinensis (isolates:94; rSTs:87 tree)
          • Cronobacter malonaticus (isolates:108; rSTs:63 tree)
          • Cronobacter muytjensii (isolates:12; rSTs:13 tree)
          • Cronobacter sakazakii (isolates:1219; rSTs:274 tree)
          • Cronobacter sp. (isolates:7; rSTs:2)
          • Cronobacter turicensis (isolates:45; rSTs:34 tree)
          • Cronobacter universalis (isolates:6; rSTs:5 tree)
        • Dryocola (isolates:5; rSTs:3 tree)
          • Dryocola boscaweniae (isolates:3; rSTs:2)
          • Dryocola clanedunensis (isolates:2; rSTs:1)
        • Edaphovirga (isolates:1; rSTs:1)
          • Edaphovirga cremea (isolates:1; rSTs:1)
        • Enterobacter (isolates:8937; rSTs:2677)
          • Enterobacter asburiae (isolates:559; rSTs:217 tree)
          • Enterobacter bugandensis (isolates:252; rSTs:140 tree)
          • Enterobacter cancerogenus (isolates:26; rSTs:18 tree)
          • Enterobacter chengduensis (isolates:26; rSTs:6 tree)
          • Enterobacter chinensis (isolates:1; rSTs:1)
          • Enterobacter chuandaensis (isolates:10; rSTs:8 tree)
          • Enterobacter cloacae (isolates:613; rSTs:254 tree)
          • Enterobacter dykesii (isolates:3; rSTs:3 tree)
          • Enterobacter genomosp. O (isolates:3; rSTs:3 tree)
          • Enterobacter genomosp. S (isolates:1; rSTs:1)
          • Enterobacter hormaechei (isolates:5817; rSTs:1228 tree)
          • Enterobacter huaxiensis (isolates:7; rSTs:5 tree)
          • Enterobacter kobei (isolates:440; rSTs:165 tree)
          • Enterobacter ludwigii (isolates:210; rSTs:121 tree)
          • Enterobacter mori (isolates:54; rSTs:45 tree)
          • Enterobacter nematophilus (isolates:2; rSTs:2)
          • Enterobacter oligotrophicus (isolates:3; rSTs:2)
          • Enterobacter pasteurii (isolates:5; rSTs:5 tree)
          • Enterobacter pseudoroggenkampii (isolates:4; rSTs:4 tree)
          • Enterobacter quasihormaechei (isolates:6; rSTs:4 tree)
          • Enterobacter quasimori (isolates:2; rSTs:2)
          • Enterobacter quasiroggenkampii (isolates:25; rSTs:23 tree)
          • Enterobacter roggenkampii (isolates:567; rSTs:249 tree)
          • Enterobacter rongchengensis (isolates:1; rSTs:1)
          • Enterobacter sichuanensis (isolates:20; rSTs:18 tree)
          • Enterobacter soli (isolates:12; rSTs:8 tree)
          • Enterobacter sp. (isolates:253; rSTs:130 tree)
          • Enterobacter vonholyi (isolates:11; rSTs:10 tree)
          • Enterobacter wuhouensis (isolates:4; rSTs:4 tree)
        • Entomohabitans (isolates:1; rSTs:1)
          • Entomohabitans teleogrylli (isolates:1; rSTs:1)
        • Escherichia (isolates:44827; rSTs:11992)
          • Escherichia albertii (isolates:513; rSTs:269 tree)
          • Escherichia coli (isolates:43730; rSTs:11457)
          • Escherichia fergusonii (isolates:247; rSTs:129 tree)
          • Escherichia marmotae (isolates:113; rSTs:80 tree)
          • Escherichia ruysiae (isolates:23; rSTs:8 tree)
          • Escherichia sp. (isolates:196; rSTs:45 tree)
          • Escherichia whittamii (isolates:5; rSTs:4 tree)
        • Franconibacter (isolates:11; rSTs:11 tree)
          • Franconibacter daqui (isolates:3; rSTs:3 tree)
          • Franconibacter helveticus (isolates:5; rSTs:3 tree)
          • Franconibacter pulveris (isolates:2; rSTs:2)
          • Franconibacter sp. (isolates:1; rSTs:3 tree)
        • Huaxiibacter (isolates:1; rSTs:1)
          • Huaxiibacter chinensis (isolates:1; rSTs:1)
        • Intestinirhabdus (isolates:1; rSTs:1)
          • Intestinirhabdus alba (isolates:1; rSTs:1)
        • Jejubacter (isolates:1; rSTs:1)
          • Jejubacter calystegiae (isolates:1; rSTs:1)
        • Klebsiella (isolates:59593; rSTs:9869)
          • Klebsiella aerogenes (isolates:957; rSTs:499 tree)
          • Klebsiella africana (isolates:4; rSTs:4 tree)
          • Klebsiella electrica (isolates:3; rSTs:6 tree)
          • Klebsiella grimontii (isolates:203; rSTs:101 tree)
          • Klebsiella huaxiensis (isolates:6; rSTs:5 tree)
          • Klebsiella indica (isolates:2; rSTs:2)
          • Klebsiella michiganensis (isolates:706; rSTs:253 tree)
          • Klebsiella oxytoca (isolates:713; rSTs:250 tree)
          • Klebsiella pasteurii (isolates:48; rSTs:32 tree)
          • Klebsiella pneumoniae (isolates:53007; rSTs:6513)
          • Klebsiella quasipneumoniae (isolates:1876; rSTs:1032 tree)
          • Klebsiella quasivariicola (isolates:22; rSTs:8 tree)
          • Klebsiella sp. (isolates:515; rSTs:208 tree)
          • Klebsiella spallanzanii (isolates:5; rSTs:5 tree)
          • Klebsiella variicola (isolates:1526; rSTs:951 tree)
        • Kluyvera (isolates:55; rSTs:50 tree)
          • Kluyvera ascorbata (isolates:20; rSTs:16 tree)
          • Kluyvera cryocrescens (isolates:13; rSTs:13 tree)
          • Kluyvera genomosp. 1 (isolates:1; rSTs:1)
          • Kluyvera genomosp. 2 (isolates:2; rSTs:1)
          • Kluyvera genomosp. 3 (isolates:1; rSTs:1)
          • Kluyvera georgiana (isolates:4; rSTs:4 tree)
          • Kluyvera intermedia (isolates:6; rSTs:3 tree)
          • Kluyvera sichuanensis (isolates:2; rSTs:2)
          • Kluyvera sp. (isolates:6; rSTs:9 tree)
        • Kosakonia (isolates:79; rSTs:64 tree)
          • Kosakonia arachidis (isolates:2; rSTs:1)
          • Kosakonia cowanii (isolates:21; rSTs:17 tree)
          • Kosakonia oryzae (isolates:3; rSTs:3 tree)
          • Kosakonia oryzendophytica (isolates:3; rSTs:2)
          • Kosakonia oryziphila (isolates:1; rSTs:1)
          • Kosakonia pseudosacchari (isolates:4; rSTs:4 tree)
          • Kosakonia quasisacchari (isolates:1; rSTs:1)
          • Kosakonia radicincitans (isolates:14; rSTs:10 tree)
          • Kosakonia sacchari (isolates:11; rSTs:10 tree)
          • Kosakonia sp. (isolates:19; rSTs:15 tree)
        • Leclercia (isolates:104; rSTs:64 tree)
          • Leclercia adecarboxylata (isolates:76; rSTs:34 tree)
          • Leclercia sp. (isolates:26; rSTs:28 tree)
          • Leclercia tamurae (isolates:2; rSTs:2)
        • Lelliottia (isolates:55; rSTs:35 tree)
          • Lelliottia amnigena (isolates:25; rSTs:18 tree)
          • Lelliottia aquatilis (isolates:7; rSTs:4 tree)
          • Lelliottia nimipressuralis (isolates:4; rSTs:3 tree)
          • Lelliottia sp. (isolates:19; rSTs:10 tree)
        • Mangrovibacter (isolates:5; rSTs:5 tree)
          • Mangrovibacter phragmitis (isolates:2; rSTs:2)
          • Mangrovibacter plantisponsor (isolates:1; rSTs:1)
          • Mangrovibacter sp. (isolates:1; rSTs:1)
          • Mangrovibacter yixingensis (isolates:1; rSTs:1)
        • Phytobacter (isolates:31; rSTs:24 tree)
          • Phytobacter diazotrophicus (isolates:19; rSTs:14 tree)
          • Phytobacter massiliensis (isolates:3; rSTs:2)
          • Phytobacter palmae (isolates:2; rSTs:2)
          • Phytobacter sp. (isolates:3; rSTs:2)
          • Phytobacter ursingii (isolates:4; rSTs:4 tree)
        • Plesiomonas (isolates:47; rSTs:40 tree)
          • Plesiomonas shigelloides (isolates:45; rSTs:38 tree)
          • Plesiomonas sp. (isolates:2; rSTs:2)
        • Pluralibacter (isolates:55; rSTs:28 tree)
          • Pluralibacter gergoviae (isolates:53; rSTs:26 tree)
          • [Enterobacter] lignolyticus (isolates:2; rSTs:2)
        • Pseudenterobacter (isolates:3; rSTs:2)
          • Pseudenterobacter timonensis (isolates:3; rSTs:2)
        • Pseudescherichia (isolates:11; rSTs:8 tree)
          • Pseudescherichia sp. (isolates:2; rSTs:2)
          • Pseudescherichia vulneris (isolates:9; rSTs:6 tree)
        • Pseudocitrobacter (isolates:9; rSTs:8 tree)
          • Pseudocitrobacter corydidari (isolates:1; rSTs:1)
          • Pseudocitrobacter faecalis (isolates:2; rSTs:2)
          • Pseudocitrobacter sp. (isolates:5; rSTs:4 tree)
          • Pseudocitrobacter vendiensis (isolates:1; rSTs:1)
        • Raoultella (isolates:483; rSTs:236 tree)
          • Raoultella lignicola (isolates:1; rSTs:1)
          • Raoultella ornithinolytica (isolates:308; rSTs:137 tree)
          • Raoultella planticola (isolates:89; rSTs:59 tree)
          • Raoultella scottia (isolates:2)
          • Raoultella sp. (isolates:37; rSTs:14 tree)
          • Raoultella terrigena (isolates:46; rSTs:25 tree)
        • Salmonella (isolates:36146; rSTs:14249)
          • Salmonella bongori (isolates:87; rSTs:54 tree)
          • Salmonella enterica (isolates:35548; rSTs:14177)
          • Salmonella sp. (isolates:511; rSTs:18 tree)
        • Scandinavium (isolates:15; rSTs:13 tree)
          • Scandinavium goeteborgense (isolates:5; rSTs:5 tree)
          • Scandinavium hiltneri (isolates:2; rSTs:2)
          • Scandinavium manionii (isolates:2; rSTs:2)
          • Scandinavium sp. (isolates:5; rSTs:3 tree)
          • Scandinavium tedordense (isolates:1; rSTs:1)
        • Shigella (isolates:23815; rSTs:1041 tree)
          • Shigella boydii (isolates:655; rSTs:78 tree)
          • Shigella dysenteriae (isolates:21; rSTs:33 tree)
          • Shigella flexneri (isolates:12774; rSTs:677 tree)
          • Shigella sonnei (isolates:10247; rSTs:244 tree)
          • Shigella sp. (isolates:118; rSTs:9 tree)
        • Shimwellia (isolates:5; rSTs:2)
          • Shimwellia blattae (isolates:4; rSTs:1)
          • Shimwellia pseudoproteus (isolates:1; rSTs:1)
        • Siccibacter (isolates:9; rSTs:7 tree)
          • Siccibacter colletis (isolates:3; rSTs:3 tree)
          • Siccibacter turicensis (isolates:6; rSTs:4 tree)
        • Silvania (isolates:2; rSTs:2)
          • Silvania confinis (isolates:1; rSTs:1)
          • Silvania hatchlandensis (isolates:1; rSTs:1)
        • Superficieibacter (isolates:4; rSTs:3 tree)
          • Superficieibacter electus (isolates:2; rSTs:1)
          • Superficieibacter sp. (isolates:2; rSTs:2)
        • Symbiopectobacterium (isolates:5; rSTs:5 tree)
          • Candidatus Symbiopectobacterium sp. (isolates:4; rSTs:4 tree)
          • Symbiopectobacterium purcellii (isolates:1; rSTs:1)
        • Tenebrionibacter (isolates:1; rSTs:1)
          • Tenebrionibacter intestinalis (isolates:1; rSTs:1)
        • Trabulsiella (isolates:3; rSTs:2)
          • Trabulsiella guamensis (isolates:1; rSTs:1)
          • Trabulsiella odontotermitis (isolates:2; rSTs:1)
        • Yokenella (isolates:12; rSTs:7 tree)
          • Yokenella regensburgei (isolates:12; rSTs:7 tree)
      • Erwiniaceae (isolates:1542; rSTs:825 tree)
        • Buchnera (isolates:54; rSTs:42 tree)
          • Buchnera aphidicola (isolates:54; rSTs:42 tree)
        • Duffyella (isolates:10; rSTs:8 tree)
          • Duffyella gerundensis (isolates:10; rSTs:8 tree)
        • Erwinia (isolates:462; rSTs:150 tree)
          • Candidatus Erwinia dacicola (isolates:5; rSTs:1)
          • Candidatus Erwinia haradaeae (isolates:6; rSTs:5 tree)
          • Erwinia amylovora (isolates:251; rSTs:46 tree)
          • Erwinia aphidicola (isolates:100; rSTs:24 tree)
          • Erwinia billingiae (isolates:11; rSTs:8 tree)
          • Erwinia endophytica (isolates:1; rSTs:1)
          • Erwinia mallotivora (isolates:7; rSTs:4 tree)
          • Erwinia oleae (isolates:1; rSTs:1)
          • Erwinia persicina (isolates:15; rSTs:12 tree)
          • Erwinia phyllosphaerae (isolates:1; rSTs:1)
          • Erwinia piriflorinigrans (isolates:1; rSTs:1)
          • Erwinia psidii (isolates:4; rSTs:4 tree)
          • Erwinia pyri (isolates:1; rSTs:1)
          • Erwinia pyrifoliae (isolates:9; rSTs:6 tree)
          • Erwinia rhapontici (isolates:9; rSTs:7 tree)
          • Erwinia sorbitola (isolates:2; rSTs:2)
          • Erwinia sp. (isolates:26; rSTs:18 tree)
          • Erwinia tasmaniensis (isolates:1; rSTs:1)
          • Erwinia tracheiphila (isolates:7; rSTs:4 tree)
          • Erwinia typographi (isolates:1; rSTs:1)
          • [Pantoea] beijingensis (isolates:3; rSTs:2)
        • Izhakiella (isolates:2; rSTs:2)
          • Izhakiella australiensis (isolates:1; rSTs:1)
          • Izhakiella capsodis (isolates:1; rSTs:1)
        • Mixta (isolates:15; rSTs:11 tree)
          • Mixta calida (isolates:5; rSTs:3 tree)
          • Mixta gaviniae (isolates:2; rSTs:1)
          • Mixta hanseatica (isolates:1; rSTs:1)
          • Mixta intestinalis (isolates:1; rSTs:1)
          • Mixta mediterraneensis (isolates:1; rSTs:1)
          • Mixta sp. (isolates:2; rSTs:2)
          • Mixta tenebrionis (isolates:1; rSTs:1)
          • Mixta theicola (isolates:2; rSTs:1)
        • Pantoea (isolates:942; rSTs:568 tree)
          • Candidatus Pantoea carbekii (isolates:2; rSTs:2)
          • Candidatus Pantoea edessiphila (isolates:4; rSTs:4 tree)
          • Candidatus Pantoea persica (isolates:1; rSTs:1)
          • Pantoea agglomerans (isolates:243; rSTs:163 tree)
          • Pantoea alfalfae (isolates:1; rSTs:1)
          • Pantoea alhagi (isolates:2; rSTs:2)
          • Pantoea allii (isolates:15; rSTs:8 tree)
          • Pantoea alvi (isolates:1; rSTs:1)
          • Pantoea ananatis (isolates:284; rSTs:117 tree)
          • Pantoea anthophila (isolates:15; rSTs:12 tree)
          • Pantoea bituminis (isolates:1; rSTs:1)
          • Pantoea brenneri (isolates:24; rSTs:6 tree)
          • Pantoea coffeiphila (isolates:2; rSTs:2)
          • Pantoea communis (isolates:1; rSTs:1)
          • Pantoea conspicua (isolates:1; rSTs:1)
          • Pantoea cypripedii (isolates:5; rSTs:3 tree)
          • Pantoea deleyi (isolates:3; rSTs:1)
          • Pantoea deserta (isolates:1; rSTs:1)
          • Pantoea dispersa (isolates:54; rSTs:37 tree)
          • Pantoea endophytica (isolates:4; rSTs:4 tree)
          • Pantoea eucalypti (isolates:7; rSTs:5 tree)
          • Pantoea eucrina (isolates:7; rSTs:7 tree)
          • Pantoea floridensis (isolates:1; rSTs:1)
          • Pantoea formicae (isolates:1; rSTs:1)
          • Pantoea gossypiicola (isolates:1; rSTs:1)
          • Pantoea latae (isolates:1; rSTs:1)
          • Pantoea multigeneris (isolates:1; rSTs:1)
          • Pantoea nemavictus (isolates:2; rSTs:1)
          • Pantoea phytobeneficialis (isolates:2; rSTs:1)
          • Pantoea piersonii (isolates:6; rSTs:3 tree)
          • Pantoea rodasii (isolates:2; rSTs:1)
          • Pantoea rwandensis (isolates:1; rSTs:1)
          • Pantoea septica (isolates:4; rSTs:4 tree)
          • Pantoea soli (isolates:1; rSTs:1)
          • Pantoea sp. (isolates:183; rSTs:130 tree)
          • Pantoea stewartii (isolates:40; rSTs:25 tree)
          • Pantoea symbiotica (isolates:1; rSTs:1)
          • Pantoea trifolii (isolates:1; rSTs:1)
          • Pantoea vagans (isolates:13; rSTs:11 tree)
          • Pantoea varia (isolates:1; rSTs:1)
          • Pantoea wallisii (isolates:1; rSTs:1)
          • [Erwinia] mediterraneensis (isolates:1; rSTs:1)
        • Paramixta (isolates:1; rSTs:1)
          • Paramixta manurensis (isolates:1; rSTs:1)
        • Phaseolibacter (isolates:1; rSTs:1)
          • Phaseolibacter flectens (isolates:1; rSTs:1)
        • Rosenbergiella (isolates:27; rSTs:24 tree)
          • Rosenbergiella australiborealis (isolates:3; rSTs:3 tree)
          • Rosenbergiella collisarenosi (isolates:4; rSTs:4 tree)
          • Rosenbergiella epipactidis (isolates:11; rSTs:10 tree)
          • Rosenbergiella gaditana (isolates:1; rSTs:1)
          • Rosenbergiella metrosideri (isolates:1; rSTs:1)
          • Rosenbergiella nectarea (isolates:7; rSTs:5 tree)
        • Tatumella (isolates:17; rSTs:11 tree)
          • Tatumella citrea (isolates:2; rSTs:1)
          • Tatumella morbirosei (isolates:1; rSTs:1)
          • Tatumella ptyseos (isolates:3; rSTs:1)
          • Tatumella punctata (isolates:1; rSTs:1)
          • Tatumella saanichensis (isolates:1; rSTs:1)
          • Tatumella sp. (isolates:8; rSTs:5 tree)
          • Tatumella terrea (isolates:1; rSTs:1)
        • Wigglesworthia (isolates:2; rSTs:1)
          • Wigglesworthia glossinidia (isolates:2; rSTs:1)
        • Winslowiella (isolates:6; rSTs:4 tree)
          • Winslowiella arboricola (isolates:2; rSTs:1)
          • Winslowiella iniecta (isolates:2; rSTs:1)
          • Winslowiella toletana (isolates:2; rSTs:2)
      • Gallaecimonadaceae (isolates:6; rSTs:6 tree)
        • Gallaecimonas (isolates:6; rSTs:6 tree)
          • Gallaecimonas kandeliae (isolates:1; rSTs:1)
          • Gallaecimonas mangrovi (isolates:1; rSTs:1)
          • Gallaecimonas pentaromativorans (isolates:2; rSTs:2)
          • Gallaecimonas sp. (isolates:1; rSTs:1)
          • Gallaecimonas xiamenensis (isolates:1; rSTs:1)
      • Hafniaceae (isolates:234; rSTs:115 tree)
        • Edwardsiella (isolates:127; rSTs:47 tree)
          • Edwardsiella anguillarum (isolates:26; rSTs:6 tree)
          • Edwardsiella hoshinae (isolates:4; rSTs:2)
          • Edwardsiella ictaluri (isolates:39; rSTs:5 tree)
          • Edwardsiella piscicida (isolates:33; rSTs:16 tree)
          • Edwardsiella sp. (isolates:2)
          • Edwardsiella tarda (isolates:23; rSTs:18 tree)
        • Enterobacillus (isolates:2; rSTs:1)
          • Enterobacillus tribolii (isolates:2; rSTs:1)
        • Hafnia (isolates:96; rSTs:62 tree)
          • Hafnia alvei (isolates:52; rSTs:33 tree)
          • Hafnia paralvei (isolates:41; rSTs:26 tree)
          • Hafnia psychrotolerans (isolates:1; rSTs:1)
          • Hafnia sp. (isolates:2; rSTs:2)
        • Obesumbacterium (isolates:9; rSTs:5 tree)
          • Obesumbacterium proteus (isolates:9; rSTs:5 tree)
      • Morganellaceae (isolates:3443; rSTs:1698 tree)
        • Arsenophonus (isolates:19; rSTs:12 tree)
          • Arsenophonus apicola (isolates:1; rSTs:1)
          • Arsenophonus endosymbiont of Aleurodicus dispersus (isolates:1; rSTs:1)
          • Arsenophonus endosymbiont of Aleurodicus floccissimus (isolates:1)
          • Arsenophonus endosymbiont of Aphis craccivora (isolates:1; rSTs:1)
          • Arsenophonus endosymbiont of Apis mellifera (isolates:1; rSTs:1)
          • Arsenophonus endosymbiont of Bemisia tabaci (isolates:1; rSTs:1)
          • Arsenophonus nasoniae (isolates:8; rSTs:3 tree)
          • Arsenophonus sp. (isolates:1; rSTs:2)
          • Arsenophonus symbiont of Ornithomya chloropus (isolates:1)
          • Candidatus Arsenophonus lipoptenae (isolates:1; rSTs:1)
          • Candidatus Arsenophonus nilaparvatae (isolates:1; rSTs:1)
          • Candidatus Arsenophonus triatominarum (isolates:1)
        • Moellerella (isolates:29; rSTs:9 tree)
          • Moellerella wisconsensis (isolates:29; rSTs:9 tree)
        • Morganella (isolates:456; rSTs:230 tree)
          • Morganella morganii (isolates:443; rSTs:223 tree)
          • Morganella psychrotolerans (isolates:6; rSTs:3 tree)
          • Morganella sp. (isolates:7; rSTs:4 tree)
        • Photorhabdus (isolates:145; rSTs:63 tree)
          • Photorhabdus aballayi (isolates:1; rSTs:1)
          • Photorhabdus aegyptia (isolates:2; rSTs:1)
          • Photorhabdus akhurstii (isolates:3; rSTs:2)
          • Photorhabdus antumapuensis (isolates:2; rSTs:1)
          • Photorhabdus asymbiotica (isolates:4; rSTs:1)
          • Photorhabdus australis (isolates:4; rSTs:2)
          • Photorhabdus bodei (isolates:8; rSTs:2)
          • Photorhabdus caribbeanensis (isolates:2; rSTs:1)
          • Photorhabdus cinerea (isolates:2; rSTs:1)
          • Photorhabdus hainanensis (isolates:2; rSTs:1)
          • Photorhabdus heterorhabditis (isolates:8; rSTs:4 tree)
          • Photorhabdus hindustanensis (isolates:2; rSTs:1)
          • Photorhabdus kayaii (isolates:4; rSTs:2)
          • Photorhabdus khanii (isolates:6; rSTs:3 tree)
          • Photorhabdus kleinii (isolates:1; rSTs:1)
          • Photorhabdus laumondii (isolates:38; rSTs:6 tree)
          • Photorhabdus luminescens (isolates:11; rSTs:5 tree)
          • Photorhabdus namnaonensis (isolates:2; rSTs:1)
          • Photorhabdus noenieputensis (isolates:4; rSTs:1)
          • Photorhabdus sp. (isolates:25; rSTs:17 tree)
          • Photorhabdus stackebrandtii (isolates:2; rSTs:1)
          • Photorhabdus tasmaniensis (isolates:2; rSTs:1)
          • Photorhabdus temperata (isolates:7; rSTs:5 tree)
          • Photorhabdus thracensis (isolates:3; rSTs:2)
        • Proteus (isolates:1964; rSTs:875 tree)
          • Proteus alimentorum (isolates:4; rSTs:3 tree)
          • Proteus appendicitidis (isolates:1; rSTs:1)
          • Proteus cibi (isolates:4; rSTs:4 tree)
          • Proteus columbae (isolates:1; rSTs:1)
          • Proteus faecis (isolates:30; rSTs:13 tree)
          • Proteus genomosp. 4 (isolates:1; rSTs:1)
          • Proteus genomosp. 6 (isolates:3; rSTs:3 tree)
          • Proteus hauseri (isolates:4; rSTs:3 tree)
          • Proteus mirabilis (isolates:1697; rSTs:653 tree)
          • Proteus myxofaciens (isolates:1; rSTs:1)
          • Proteus penneri (isolates:20; rSTs:18 tree)
          • Proteus sp. (isolates:90; rSTs:87 tree)
          • Proteus terrae (isolates:81; rSTs:64 tree)
          • Proteus vulgaris (isolates:27; rSTs:23 tree)
        • Providencia (isolates:638; rSTs:402 tree)
          • Candidatus Providencia siddallii (isolates:2; rSTs:1)
          • Providencia alcalifaciens (isolates:41; rSTs:21 tree)
          • Providencia burhodogranariea (isolates:1; rSTs:1)
          • Providencia hangzhouensis (isolates:2; rSTs:2)
          • Providencia heimbachae (isolates:8; rSTs:3 tree)
          • Providencia huashanensis (isolates:3; rSTs:2)
          • Providencia huaxiensis (isolates:45; rSTs:14 tree)
          • Providencia manganoxydans (isolates:8; rSTs:7 tree)
          • Providencia rettgeri (isolates:95; rSTs:60 tree)
          • Providencia rustigianii (isolates:21; rSTs:9 tree)
          • Providencia sneebia (isolates:1)
          • Providencia sp. (isolates:270; rSTs:215 tree)
          • Providencia stuartii (isolates:135; rSTs:61 tree)
          • Providencia vermicola (isolates:4; rSTs:4 tree)
          • Providencia xianensis (isolates:1; rSTs:1)
          • Providencia zhijiangensis (isolates:1; rSTs:1)
        • Xenorhabdus (isolates:192; rSTs:107 tree)
          • Xenorhabdus aichiensis (isolates:1; rSTs:1)
          • Xenorhabdus anantnagensis (isolates:1; rSTs:1)
          • Xenorhabdus beddingii (isolates:2; rSTs:1)
          • Xenorhabdus bovienii (isolates:69; rSTs:41 tree)
          • Xenorhabdus budapestensis (isolates:3; rSTs:2)
          • Xenorhabdus cabanillasii (isolates:5; rSTs:2)
          • Xenorhabdus doucetiae (isolates:4; rSTs:1)
          • Xenorhabdus eapokensis (isolates:2; rSTs:1)
          • Xenorhabdus ehlersii (isolates:4; rSTs:1)
          • Xenorhabdus griffiniae (isolates:2; rSTs:1)
          • Xenorhabdus hominickii (isolates:3; rSTs:1)
          • Xenorhabdus indica (isolates:3; rSTs:2)
          • Xenorhabdus innexi (isolates:4; rSTs:1)
          • Xenorhabdus ishibashii (isolates:1; rSTs:1)
          • Xenorhabdus japonica (isolates:2; rSTs:1)
          • Xenorhabdus khoisanae (isolates:4; rSTs:3 tree)
          • Xenorhabdus koppenhoeferi (isolates:2; rSTs:1)
          • Xenorhabdus kozodoii (isolates:2; rSTs:1)
          • Xenorhabdus lircayensis (isolates:2; rSTs:1)
          • Xenorhabdus littoralis (isolates:2; rSTs:2)
          • Xenorhabdus mauleonii (isolates:4; rSTs:1)
          • Xenorhabdus miraniensis (isolates:2; rSTs:1)
          • Xenorhabdus nematophila (isolates:16; rSTs:5 tree)
          • Xenorhabdus poinarii (isolates:1; rSTs:1)
          • Xenorhabdus sp. (isolates:37; rSTs:26 tree)
          • Xenorhabdus stockiae (isolates:2; rSTs:1)
          • Xenorhabdus szentirmaii (isolates:7; rSTs:3 tree)
          • Xenorhabdus thuongxuanensis (isolates:2; rSTs:1)
          • Xenorhabdus vietnamensis (isolates:2; rSTs:1)
          • Xenorhabdus yunnanensis (isolates:1; rSTs:1)
      • Pectobacteriaceae (isolates:884; rSTs:503 tree)
        • Acerihabitans (isolates:2; rSTs:2)
          • Acerihabitans arboris (isolates:1; rSTs:1)
          • Acerihabitans sp. (isolates:1; rSTs:1)
        • Affinibrenneria (isolates:1; rSTs:1)
          • Affinibrenneria salicis (isolates:1; rSTs:1)
        • Brenneria (isolates:47; rSTs:22 tree)
          • Brenneria alni (isolates:1; rSTs:1)
          • Brenneria bubanii (isolates:1; rSTs:1)
          • Brenneria corticis (isolates:1; rSTs:1)
          • Brenneria goodwinii (isolates:14; rSTs:3 tree)
          • Brenneria izadpanahii (isolates:1; rSTs:1)
          • Brenneria izbisi (isolates:2; rSTs:1)
          • Brenneria nigrifluens (isolates:2; rSTs:1)
          • Brenneria populi (isolates:4; rSTs:2)
          • Brenneria roseae (isolates:2; rSTs:2)
          • Brenneria rubrifaciens (isolates:1; rSTs:1)
          • Brenneria salicis (isolates:3; rSTs:1)
          • Brenneria sp. (isolates:11; rSTs:4 tree)
          • Brenneria tiliae (isolates:3; rSTs:2)
          • Brenneria uluponensis (isolates:1; rSTs:1)
        • Dickeya (isolates:227; rSTs:94 tree)
          • Dickeya aquatica (isolates:1; rSTs:1)
          • Dickeya chrysanthemi (isolates:11; rSTs:10 tree)
          • Dickeya dadantii (isolates:21; rSTs:14 tree)
          • Dickeya dianthicola (isolates:84; rSTs:16 tree)
          • Dickeya fangzhongdai (isolates:19; rSTs:12 tree)
          • Dickeya lacustris (isolates:3; rSTs:1)
          • Dickeya oryzae (isolates:9; rSTs:9 tree)
          • Dickeya parazeae (isolates:2; rSTs:2)
          • Dickeya poaceiphila (isolates:2; rSTs:1)
          • Dickeya solani (isolates:52; rSTs:5 tree)
          • Dickeya sp. (isolates:7; rSTs:9 tree)
          • Dickeya undicola (isolates:3; rSTs:3 tree)
          • Dickeya zeae (isolates:13; rSTs:11 tree)
        • Lonsdalea (isolates:36; rSTs:10 tree)
          • Lonsdalea britannica (isolates:3; rSTs:1)
          • Lonsdalea iberica (isolates:2; rSTs:2)
          • Lonsdalea populi (isolates:27; rSTs:5 tree)
          • Lonsdalea quercina (isolates:4; rSTs:2)
        • Musicola (isolates:4; rSTs:2)
          • Musicola keenii (isolates:2; rSTs:1)
          • Musicola paradisiaca (isolates:2; rSTs:1)
        • Pectobacterium (isolates:563; rSTs:370 tree)
          • Pectobacterium actinidiae (isolates:6; rSTs:4 tree)
          • Pectobacterium aquaticum (isolates:7; rSTs:7 tree)
          • Pectobacterium araliae (isolates:2; rSTs:1)
          • Pectobacterium aroidearum (isolates:40; rSTs:27 tree)
          • Pectobacterium atrosepticum (isolates:22; rSTs:5 tree)
          • Pectobacterium betavasculorum (isolates:3; rSTs:3 tree)
          • Pectobacterium brasiliense (isolates:128; rSTs:80 tree)
          • Pectobacterium cacticida (isolates:6; rSTs:4 tree)
          • Pectobacterium carotovorum (isolates:73; rSTs:50 tree)
          • Pectobacterium colocasium (isolates:2; rSTs:2)
          • Pectobacterium fontis (isolates:1; rSTs:1)
          • Pectobacterium jejuense (isolates:2; rSTs:2)
          • Pectobacterium odoriferum (isolates:22; rSTs:15 tree)
          • Pectobacterium parmentieri (isolates:63; rSTs:16 tree)
          • Pectobacterium parvum (isolates:10; rSTs:8 tree)
          • Pectobacterium peruviense (isolates:4; rSTs:3 tree)
          • Pectobacterium polaris (isolates:31; rSTs:25 tree)
          • Pectobacterium polonicum (isolates:5; rSTs:5 tree)
          • Pectobacterium punjabense (isolates:9; rSTs:6 tree)
          • Pectobacterium quasiaquaticum (isolates:7; rSTs:4 tree)
          • Pectobacterium sp. (isolates:8; rSTs:13 tree)
          • Pectobacterium versatile (isolates:105; rSTs:86 tree)
          • Pectobacterium wasabiae (isolates:4; rSTs:1)
          • Pectobacterium zantedeschiae (isolates:3; rSTs:2)
        • Prodigiosinella (isolates:2; rSTs:1)
          • Prodigiosinella confusarubida (isolates:2; rSTs:1)
        • Samsonia (isolates:2; rSTs:1)
          • Samsonia erythrinae (isolates:2; rSTs:1)
      • Thorselliaceae (isolates:1; rSTs:1)
        • Thorsellia (isolates:1; rSTs:1)
          • Thorsellia anophelis (isolates:1; rSTs:1)
      • Yersiniaceae (isolates:4368; rSTs:1989)
        • Candidatus Fukatsuia (isolates:4; rSTs:2)
          • Candidatus Fukatsuia anoeciicola (isolates:1)
          • Candidatus Fukatsuia symbiotica (isolates:3; rSTs:2)
        • Chania (isolates:2; rSTs:1)
          • Chania multitudinisentens (isolates:2; rSTs:1)
        • Chimaeribacter (isolates:6; rSTs:6 tree)
          • Chimaeribacter arupi (isolates:4; rSTs:4 tree)
          • Chimaeribacter californicus (isolates:1; rSTs:1)
          • Chimaeribacter coloradensis (isolates:1; rSTs:1)
        • Ewingella (isolates:7; rSTs:6 tree)
          • Ewingella americana (isolates:6; rSTs:5 tree)
          • Ewingella sp. (isolates:1; rSTs:1)
        • Gibbsiella (isolates:5; rSTs:3 tree)
          • Gibbsiella quercinecans (isolates:5; rSTs:3 tree)
        • Nissabacter (isolates:2; rSTs:2)
          • Nissabacter archeti (isolates:2; rSTs:2)
        • Rahnella (isolates:64; rSTs:57 tree)
          • Rahnella aceris (isolates:8; rSTs:8 tree)
          • Rahnella aquatilis (isolates:4; rSTs:3 tree)
          • Rahnella bonaserana (isolates:3; rSTs:3 tree)
          • Rahnella bruchi (isolates:1; rSTs:1)
          • Rahnella contaminans (isolates:2; rSTs:2)
          • Rahnella ecdela (isolates:1; rSTs:1)
          • Rahnella inusitata (isolates:3; rSTs:2)
          • Rahnella laticis (isolates:2; rSTs:2)
          • Rahnella perminowiae (isolates:7; rSTs:5 tree)
          • Rahnella rivi (isolates:1; rSTs:1)
          • Rahnella sikkimica (isolates:1; rSTs:1)
          • Rahnella sp. (isolates:21; rSTs:20 tree)
          • Rahnella variigena (isolates:5; rSTs:3 tree)
          • Rahnella victoriana (isolates:4; rSTs:4 tree)
          • Rahnella woolbedingensis (isolates:1; rSTs:1)
        • Rouxiella (isolates:19; rSTs:16 tree)
          • Rouxiella aceris (isolates:1; rSTs:1)
          • Rouxiella badensis (isolates:12; rSTs:9 tree)
          • Rouxiella chamberiensis (isolates:2; rSTs:2)
          • Rouxiella silvae (isolates:2; rSTs:2)
          • Rouxiella sp. (isolates:2; rSTs:2)
        • Serratia (isolates:1027; rSTs:931 tree)
          • Serratia bockelmannii (isolates:41; rSTs:23 tree)
          • Serratia entomophila (isolates:68; rSTs:19 tree)
          • Serratia ficaria (isolates:25; rSTs:20 tree)
          • Serratia fonticola (isolates:75; rSTs:53 tree)
          • Serratia grimesii (isolates:13; rSTs:10 tree)
          • Serratia inhibens (isolates:3; rSTs:3 tree)
          • Serratia liquefaciens (isolates:83; rSTs:48 tree)
          • Serratia marcescens (isolates:171; rSTs:95 tree)
          • Serratia microhaemolytica (isolates:1; rSTs:1)
          • Serratia montpellierensis (isolates:2; rSTs:2)
          • Serratia nematodiphila (isolates:6; rSTs:5 tree)
          • Serratia nevei (isolates:112; rSTs:35 tree)
          • Serratia odorifera (isolates:6; rSTs:3 tree)
          • Serratia oryzae (isolates:2; rSTs:2)
          • Serratia plymuthica (isolates:30; rSTs:21 tree)
          • Serratia proteamaculans (isolates:32; rSTs:22 tree)
          • Serratia quinivorans (isolates:44; rSTs:27 tree)
          • Serratia rhizosphaerae (isolates:2; rSTs:2)
          • Serratia rubidaea (isolates:24; rSTs:14 tree)
          • Serratia sarumanii (isolates:4; rSTs:3 tree)
          • Serratia silvae (isolates:1; rSTs:1)
          • Serratia sp. (isolates:106; rSTs:399 tree)
          • Serratia surfactantfaciens (isolates:4; rSTs:4 tree)
          • Serratia symbiotica (isolates:10; rSTs:11 tree)
          • Serratia ureilytica (isolates:162; rSTs:108 tree)
        • Yersinia (isolates:3232; rSTs:965 tree)
          • Yersinia aldovae (isolates:11; rSTs:11 tree)
          • Yersinia aleksiciae (isolates:14; rSTs:9 tree)
          • Yersinia alsatica (isolates:20; rSTs:10 tree)
          • Yersinia artesiana (isolates:4; rSTs:1)
          • Yersinia bercovieri (isolates:20; rSTs:19 tree)
          • Yersinia canariae (isolates:3; rSTs:3 tree)
          • Yersinia enterocolitica (isolates:1489; rSTs:449 tree)
          • Yersinia entomophaga (isolates:1; rSTs:1)
          • Yersinia frederiksenii (isolates:13; rSTs:9 tree)
          • Yersinia hibernica (isolates:3; rSTs:2)
          • Yersinia intermedia (isolates:42; rSTs:37 tree)
          • Yersinia kristensenii (isolates:53; rSTs:28 tree)
          • Yersinia massiliensis (isolates:17; rSTs:20 tree)
          • Yersinia mollaretii (isolates:39; rSTs:21 tree)
          • Yersinia nurmii (isolates:2; rSTs:2)
          • Yersinia pekkanenii (isolates:3; rSTs:1)
          • Yersinia pestis (isolates:911; rSTs:94 tree)
          • Yersinia proxima (isolates:10; rSTs:9 tree)
          • Yersinia pseudotuberculosis (isolates:337; rSTs:111 tree)
          • Yersinia rochesterensis (isolates:13; rSTs:9 tree)
          • Yersinia rohdei (isolates:15; rSTs:17 tree)
          • Yersinia ruckeri (isolates:176; rSTs:39 tree)
          • Yersinia similis (isolates:9; rSTs:7 tree)
          • Yersinia sp. (isolates:10; rSTs:47 tree)
          • Yersinia thracica (isolates:4; rSTs:3 tree)
          • Yersinia vastinensis (isolates:9; rSTs:4 tree)
          • Yersinia wautersii (isolates:4; rSTs:2)
    • Immundisolibacterales (isolates:1; rSTs:1)
      • Immundisolibacteraceae (isolates:1; rSTs:1)
        • Immundisolibacter (isolates:1; rSTs:1)
          • Immundisolibacter cernigliae (isolates:1; rSTs:1)
    • Kangiellales (isolates:13; rSTs:10 tree)
      • Kangiellaceae (isolates:13; rSTs:10 tree)
        • Kangiella (isolates:13; rSTs:10 tree)
          • Kangiella aquimarina (isolates:2; rSTs:1)
          • Kangiella geojedonensis (isolates:1; rSTs:1)
          • Kangiella japonica (isolates:1; rSTs:1)
          • Kangiella koreensis (isolates:1; rSTs:1)
          • Kangiella marina (isolates:1; rSTs:1)
          • Kangiella profundi (isolates:2; rSTs:1)
          • Kangiella sediminilitoris (isolates:1; rSTs:1)
          • Kangiella shandongensis (isolates:1; rSTs:1)
          • Kangiella spongicola (isolates:1; rSTs:1)
          • Kangiella taiwanensis (isolates:2; rSTs:1)
    • Legionellales (isolates:5017; rSTs:934 tree)
      • Coxiellaceae (isolates:180; rSTs:70 tree)
        • Aquicella (isolates:3; rSTs:2)
          • Aquicella lusitana (isolates:2; rSTs:1)
          • Aquicella siphonis (isolates:1; rSTs:1)
        • Candidatus Aquirickettsiella (isolates:1; rSTs:1)
          • Candidatus Aquirickettsiella gammari (isolates:1; rSTs:1)
        • Coxiella (isolates:163; rSTs:57 tree)
          • Candidatus Coxiella mudrowiae (isolates:2; rSTs:2)
          • Coxiella burnetii (isolates:154; rSTs:48 tree)
          • Coxiella endosymbiont of Amblyomma americanum (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Amblyomma nuttalli (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Amblyomma sculptum (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Dermacentor marginatus (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Ornithodoros amblus (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Ornithodoros maritimus (isolates:1; rSTs:1)
          • Coxiella endosymbiont of Rhipicephalus microplus (isolates:1; rSTs:1)
        • Rickettsiella (isolates:10; rSTs:8 tree)
          • Candidatus Rickettsiella isopodorum (isolates:1; rSTs:1)
          • Candidatus Rickettsiella viridis (isolates:1; rSTs:1)
          • Rickettsiella endosymbiont of Aleochara curtula (isolates:1; rSTs:1)
          • Rickettsiella endosymbiont of Dermanyssus gallinae (isolates:1; rSTs:1)
          • Rickettsiella endosymbiont of Miltochrista miniata (isolates:1; rSTs:1)
          • Rickettsiella endosymbiont of Rhagonycha lignosa (isolates:1; rSTs:1)
          • Rickettsiella endosymbiont of Xylota segnis (isolates:1; rSTs:1)
          • Rickettsiella grylli (isolates:2; rSTs:1)
          • Rickettsiella massiliensis (isolates:1)
      • Legionellaceae (isolates:4837; rSTs:864 tree)
        • Fluoribacter (isolates:19; rSTs:11 tree)
          • Fluoribacter dumoffii (isolates:11; rSTs:6 tree)
          • Fluoribacter gormanii (isolates:8; rSTs:5 tree)
        • Legionella (isolates:4818; rSTs:853 tree)
          • Candidatus Legionella polyplacis (isolates:3; rSTs:3 tree)
          • Legionella adelaidensis (isolates:3; rSTs:1)
          • Legionella anisa (isolates:10; rSTs:3 tree)
          • Legionella antarctica (isolates:1; rSTs:1)
          • Legionella beliardensis (isolates:2; rSTs:1)
          • Legionella birminghamensis (isolates:3; rSTs:3 tree)
          • Legionella bononiensis (isolates:3; rSTs:1)
          • Legionella bozemanae (isolates:5; rSTs:2)
          • Legionella brunensis (isolates:2; rSTs:1)
          • Legionella busanensis (isolates:2; rSTs:1)
          • Legionella cardiaca (isolates:1; rSTs:1)
          • Legionella cherrii (isolates:4; rSTs:2)
          • Legionella cincinnatiensis (isolates:3; rSTs:1)
          • Legionella clemsonensis (isolates:1; rSTs:1)
          • Legionella donaldsonii (isolates:1; rSTs:1)
          • Legionella drancourtii (isolates:1)
          • Legionella drozanskii (isolates:2; rSTs:2)
          • Legionella erythra (isolates:2; rSTs:1)
          • Legionella fairfieldensis (isolates:2; rSTs:1)
          • Legionella fallonii (isolates:1; rSTs:1)
          • Legionella feeleii (isolates:5; rSTs:2)
          • Legionella geestiana (isolates:6; rSTs:2)
          • Legionella genomosp. 1 (isolates:1; rSTs:1)
          • Legionella gratiana (isolates:3; rSTs:2)
          • Legionella gresilensis (isolates:1; rSTs:1)
          • Legionella hackeliae (isolates:3; rSTs:2)
          • Legionella impletisoli (isolates:2; rSTs:1)
          • Legionella israelensis (isolates:7; rSTs:3 tree)
          • Legionella jamestowniensis (isolates:4; rSTs:2)
          • Legionella jordanis (isolates:7; rSTs:3 tree)
          • Legionella lansingensis (isolates:4; rSTs:1)
          • Legionella londiniensis (isolates:3; rSTs:1)
          • Legionella longbeachae (isolates:8; rSTs:5 tree)
          • Legionella lytica (isolates:1; rSTs:1)
          • Legionella maceachernii (isolates:4; rSTs:1)
          • Legionella maioricensis (isolates:2; rSTs:1)
          • Legionella massiliensis (isolates:2; rSTs:1)
          • Legionella micdadei (isolates:7; rSTs:3 tree)
          • Legionella moravica (isolates:5; rSTs:1)
          • Legionella nagasakiensis (isolates:1; rSTs:1)
          • Legionella nautarum (isolates:2; rSTs:1)
          • Legionella norrlandica (isolates:1; rSTs:1)
          • Legionella oakridgensis (isolates:5; rSTs:2)
          • Legionella parisiensis (isolates:4; rSTs:1)
          • Legionella pneumophila (isolates:4595; rSTs:739 tree)
          • Legionella qingyii (isolates:3; rSTs:2)
          • Legionella quateirensis (isolates:3; rSTs:1)
          • Legionella quinlivanii (isolates:5; rSTs:2)
          • Legionella resiliens (isolates:2)
          • Legionella rowbothamii (isolates:1; rSTs:1)
          • Legionella rubrilucens (isolates:2; rSTs:1)
          • Legionella sainthelensi (isolates:8; rSTs:6 tree)
          • Legionella santicrucis (isolates:2; rSTs:1)
          • Legionella saoudiensis (isolates:1; rSTs:1)
          • Legionella septentrionalis (isolates:4; rSTs:4 tree)
          • Legionella shakespearei (isolates:3; rSTs:1)
          • Legionella sp. (isolates:12; rSTs:12 tree)
          • Legionella spiritensis (isolates:4; rSTs:2)
          • Legionella steelei (isolates:1; rSTs:1)
          • Legionella steigerwaltii (isolates:3; rSTs:1)
          • Legionella taurinensis (isolates:17; rSTs:3 tree)
          • Legionella tucsonensis (isolates:2; rSTs:1)
          • Legionella tunisiensis (isolates:1; rSTs:1)
          • Legionella wadsworthii (isolates:3; rSTs:2)
          • Legionella waltersii (isolates:3; rSTs:1)
          • Legionella worsleiensis (isolates:2; rSTs:1)
          • Legionella yabuuchiae (isolates:1; rSTs:1)
    • Lysobacterales (isolates:5397; rSTs:2398)
      • Lysobacteraceae (isolates:5213; rSTs:2233)
        • Alkalisalibacterium (isolates:1)
          • Alkalisalibacterium limincola (isolates:1)
        • Arenimonas (isolates:16; rSTs:12 tree)
          • Arenimonas caeni (isolates:1; rSTs:1)
          • Arenimonas composti (isolates:3; rSTs:1)
          • Arenimonas daejeonensis (isolates:1; rSTs:1)
          • Arenimonas donghaensis (isolates:1; rSTs:1)
          • Arenimonas fontis (isolates:1; rSTs:1)
          • Arenimonas malthae (isolates:1; rSTs:1)
          • Arenimonas maotaiensis (isolates:1; rSTs:1)
          • Arenimonas metalli (isolates:1; rSTs:1)
          • Arenimonas oryziterrae (isolates:3; rSTs:1)
          • Arenimonas soli (isolates:1; rSTs:1)
          • Arenimonas sp. (isolates:1; rSTs:1)
          • Arenimonas terrae (isolates:1; rSTs:1)
        • Coralloluteibacterium (isolates:1; rSTs:1)
          • Coralloluteibacterium stylophorae (isolates:1; rSTs:1)
        • Denitratimonas (isolates:2; rSTs:2)
          • Denitratimonas sp. (isolates:1; rSTs:1)
          • Denitratimonas tolerans (isolates:1; rSTs:1)
        • Luteimonas (isolates:83; rSTs:69 tree)
          • Luteimonas abyssi (isolates:1; rSTs:1)
          • Luteimonas aestuarii (isolates:1; rSTs:1)
          • Luteimonas aquatica (isolates:1; rSTs:1)
          • Luteimonas arsenica (isolates:1; rSTs:1)
          • Luteimonas cellulosilyticus (isolates:1; rSTs:1)
          • Luteimonas chenhongjianii (isolates:1; rSTs:1)
          • Luteimonas colneyensis (isolates:1; rSTs:1)
          • Luteimonas composti (isolates:1; rSTs:1)
          • Luteimonas cucumeris (isolates:1; rSTs:1)
          • Luteimonas deserti (isolates:1; rSTs:1)
          • Luteimonas endophytica (isolates:1; rSTs:1)
          • Luteimonas fraxinea (isolates:3; rSTs:3 tree)
          • Luteimonas galliterrae (isolates:1; rSTs:1)
          • Luteimonas gilva (isolates:1; rSTs:1)
          • Luteimonas granuli (isolates:1; rSTs:1)
          • Luteimonas huabeiensis (isolates:1; rSTs:1)
          • Luteimonas kalidii (isolates:1; rSTs:1)
          • Luteimonas lumbrici (isolates:1; rSTs:1)
          • Luteimonas lutimaris (isolates:1; rSTs:1)
          • Luteimonas marina (isolates:1; rSTs:1)
          • Luteimonas mephitis (isolates:1; rSTs:1)
          • Luteimonas padinae (isolates:1; rSTs:1)
          • Luteimonas panaciterrae (isolates:1; rSTs:1)
          • Luteimonas rhizosphaericola (isolates:1; rSTs:1)
          • Luteimonas salinisoli (isolates:1; rSTs:1)
          • Luteimonas saliphila (isolates:1; rSTs:1)
          • Luteimonas sp. (isolates:45; rSTs:32 tree)
          • Luteimonas suaedae (isolates:1; rSTs:1)
          • Luteimonas terrae (isolates:1; rSTs:1)
          • Luteimonas terricola (isolates:2; rSTs:1)
          • Luteimonas vadosa (isolates:1; rSTs:1)
          • Luteimonas viscosa (isolates:1; rSTs:1)
          • Luteimonas weifangensis (isolates:1; rSTs:1)
          • Luteimonas wenzhouensis (isolates:1; rSTs:1)
          • Luteimonas yindakuii (isolates:2; rSTs:2)
        • Lysobacter (isolates:120; rSTs:110 tree)
          • Lysobacter aestuarii (isolates:1; rSTs:1)
          • Lysobacter alkalisoli (isolates:1; rSTs:1)
          • Lysobacter antarcticus (isolates:1; rSTs:1)
          • Lysobacter antibioticus (isolates:3; rSTs:3 tree)
          • Lysobacter arenosi (isolates:1; rSTs:1)
          • Lysobacter arseniciresistens (isolates:1; rSTs:1)
          • Lysobacter arvi (isolates:1; rSTs:1)
          • Lysobacter auxotrophicus (isolates:1; rSTs:1)
          • Lysobacter avium (isolates:1; rSTs:1)
          • Lysobacter bugurensis (isolates:1; rSTs:1)
          • Lysobacter capsici (isolates:8; rSTs:7 tree)
          • Lysobacter changpingensis (isolates:1; rSTs:1)
          • Lysobacter chinensis (isolates:1; rSTs:1)
          • Lysobacter ciconiae (isolates:1; rSTs:1)
          • Lysobacter concretionis (isolates:1; rSTs:1)
          • Lysobacter daejeonensis (isolates:1; rSTs:1)
          • Lysobacter defluvii (isolates:3; rSTs:1)
          • Lysobacter dokdonensis (isolates:1; rSTs:1)
          • Lysobacter enzymogenes (isolates:5; rSTs:5 tree)
          • Lysobacter erysipheiresistens (isolates:1; rSTs:1)
          • Lysobacter firmicutimachus (isolates:2; rSTs:2)
          • Lysobacter gilvus (isolates:1; rSTs:1)
          • Lysobacter gummosus (isolates:3; rSTs:2)
          • Lysobacter helvus (isolates:1; rSTs:1)
          • Lysobacter lactosilyticus (isolates:1; rSTs:1)
          • Lysobacter lacus (isolates:1; rSTs:1)
          • Lysobacter luteus (isolates:1; rSTs:1)
          • Lysobacter lycopersici (isolates:2; rSTs:1)
          • Lysobacter maris (isolates:2; rSTs:2)
          • Lysobacter niabensis (isolates:1; rSTs:1)
          • Lysobacter niastensis (isolates:1; rSTs:1)
          • Lysobacter oculi (isolates:1; rSTs:1)
          • Lysobacter panacisoli (isolates:2; rSTs:1)
          • Lysobacter penaei (isolates:1; rSTs:1)
          • Lysobacter prati (isolates:1; rSTs:1)
          • Lysobacter profundi (isolates:1; rSTs:1)
          • Lysobacter psychrotolerans (isolates:1; rSTs:1)
          • Lysobacter pythonis (isolates:1; rSTs:1)
          • Lysobacter ruishenii (isolates:1; rSTs:1)
          • Lysobacter segetis (isolates:1; rSTs:1)
          • Lysobacter selenitireducens (isolates:1; rSTs:1)
          • Lysobacter silvestris (isolates:1; rSTs:1)
          • Lysobacter silvisoli (isolates:1; rSTs:1)
          • Lysobacter soli (isolates:4; rSTs:4 tree)
          • Lysobacter solisilvae (isolates:1; rSTs:1)
          • Lysobacter soyae (isolates:1; rSTs:1)
          • Lysobacter sp. (isolates:39; rSTs:36 tree)
          • Lysobacter spongiae (isolates:1; rSTs:1)
          • Lysobacter spongiicola (isolates:1; rSTs:1)
          • Lysobacter stagni (isolates:1; rSTs:1)
          • Lysobacter tabacisoli (isolates:1; rSTs:1)
          • Lysobacter telluris (isolates:1; rSTs:1)
          • Lysobacter terrestris (isolates:1; rSTs:1)
          • Lysobacter terrigena (isolates:1; rSTs:1)
          • Lysobacter tolerans (isolates:1; rSTs:1)
          • Lysobacter xinjiangensis (isolates:1; rSTs:1)
          • Lysobacter yananisis (isolates:2; rSTs:1)
        • Pseudolysobacter (isolates:1; rSTs:1)
          • Pseudolysobacter antarcticus (isolates:1; rSTs:1)
        • Pseudomarimonas (isolates:1; rSTs:1)
          • Pseudomarimonas arenosa (isolates:1; rSTs:1)
        • Pseudoxanthomonas (isolates:87; rSTs:76 tree)
          • Pseudoxanthomonas beigongshangi (isolates:1; rSTs:1)
          • Pseudoxanthomonas broegbernensis (isolates:2; rSTs:1)
          • Pseudoxanthomonas composti (isolates:1; rSTs:1)
          • Pseudoxanthomonas daejeonensis (isolates:2; rSTs:2)
          • Pseudoxanthomonas dokdonensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas gei (isolates:1; rSTs:1)
          • Pseudoxanthomonas helianthi (isolates:1; rSTs:1)
          • Pseudoxanthomonas indica (isolates:2; rSTs:2)
          • Pseudoxanthomonas japonensis (isolates:2; rSTs:2)
          • Pseudoxanthomonas jiangsuensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas kalamensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas kaohsiungensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas koreensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas mexicana (isolates:7; rSTs:7 tree)
          • Pseudoxanthomonas putridarboris (isolates:1)
          • Pseudoxanthomonas sacheonensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas sangjuensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas sp. (isolates:36; rSTs:32 tree)
          • Pseudoxanthomonas spadix (isolates:3; rSTs:2)
          • Pseudoxanthomonas suwonensis (isolates:2; rSTs:2)
          • Pseudoxanthomonas taiwanensis (isolates:1; rSTs:1)
          • Pseudoxanthomonas winnipegensis (isolates:15; rSTs:12 tree)
          • Pseudoxanthomonas wuyuanensis (isolates:2; rSTs:1)
          • Pseudoxanthomonas yeongjuensis (isolates:1; rSTs:1)
        • Rehaibacterium (isolates:1; rSTs:1)
          • Rehaibacterium terrae (isolates:1; rSTs:1)
        • Silanimonas (isolates:1; rSTs:1)
          • Silanimonas lenta (isolates:1; rSTs:1)
        • Stenotrophomonas (isolates:1162; rSTs:935 tree)
          • Stenotrophomonas acidaminiphila (isolates:13; rSTs:12 tree)
          • Stenotrophomonas aracearum (isolates:1; rSTs:1)
          • Stenotrophomonas bentonitica (isolates:1; rSTs:1)
          • Stenotrophomonas chelatiphaga (isolates:2; rSTs:2)
          • Stenotrophomonas cyclobalanopsidis (isolates:2; rSTs:2)
          • Stenotrophomonas daejeonensis (isolates:1; rSTs:1)
          • Stenotrophomonas geniculata (isolates:27; rSTs:20 tree)
          • Stenotrophomonas ginsengisoli (isolates:1; rSTs:1)
          • Stenotrophomonas humi (isolates:1; rSTs:1)
          • Stenotrophomonas indicatrix (isolates:29; rSTs:25 tree)
          • Stenotrophomonas koreensis (isolates:3; rSTs:3 tree)
          • Stenotrophomonas lactitubi (isolates:15; rSTs:10 tree)
          • Stenotrophomonas lacuserhaii (isolates:2; rSTs:1)
          • Stenotrophomonas maltophilia (isolates:752; rSTs:346 tree)
          • Stenotrophomonas mori (isolates:1; rSTs:1)
          • Stenotrophomonas muris (isolates:11; rSTs:10 tree)
          • Stenotrophomonas nematodicola (isolates:1; rSTs:1)
          • Stenotrophomonas nitritireducens (isolates:1; rSTs:1)
          • Stenotrophomonas oahuensis (isolates:1; rSTs:1)
          • Stenotrophomonas panacihumi (isolates:2; rSTs:1)
          • Stenotrophomonas pavanii (isolates:37; rSTs:16 tree)
          • Stenotrophomonas pennii (isolates:1; rSTs:1)
          • Stenotrophomonas pictorum (isolates:2; rSTs:1)
          • Stenotrophomonas rhizophila (isolates:9; rSTs:9 tree)
          • Stenotrophomonas riyadhensis (isolates:2; rSTs:2)
          • Stenotrophomonas sepilia (isolates:24; rSTs:17 tree)
          • Stenotrophomonas sp. (isolates:217; rSTs:445 tree)
          • Stenotrophomonas terrae (isolates:2; rSTs:2)
          • Stenotrophomonas tumulicola (isolates:1; rSTs:1)
        • Thermomonas (isolates:18; rSTs:15 tree)
          • Thermomonas alba (isolates:1; rSTs:1)
          • Thermomonas aquatica (isolates:1; rSTs:1)
          • Thermomonas beijingensis (isolates:1; rSTs:1)
          • Thermomonas brevis (isolates:1; rSTs:1)
          • Thermomonas carbonis (isolates:2; rSTs:1)
          • Thermomonas fusca (isolates:2; rSTs:2)
          • Thermomonas haemolytica (isolates:3; rSTs:1)
          • Thermomonas hydrothermalis (isolates:1; rSTs:1)
          • Thermomonas mangrovi (isolates:1; rSTs:1)
          • Thermomonas paludicola (isolates:1; rSTs:1)
          • Thermomonas sp. (isolates:4; rSTs:4 tree)
        • Vulcaniibacterium (isolates:5; rSTs:3 tree)
          • Vulcaniibacterium gelatinicum (isolates:1; rSTs:1)
          • Vulcaniibacterium tengchongense (isolates:2; rSTs:1)
          • Vulcaniibacterium thermophilum (isolates:2; rSTs:1)
        • Xanthomonas (isolates:3462; rSTs:954 tree)
          • Xanthomonas albilineans (isolates:22; rSTs:8 tree)
          • Xanthomonas alfalfae (isolates:1; rSTs:1)
          • Xanthomonas arboricola (isolates:167; rSTs:95 tree)
          • Xanthomonas axonopodis (isolates:3; rSTs:3 tree)
          • Xanthomonas bonasiae (isolates:2; rSTs:2)
          • Xanthomonas bromi (isolates:2; rSTs:1)
          • Xanthomonas campestris (isolates:558; rSTs:194 tree)
          • Xanthomonas cannabis (isolates:16; rSTs:16 tree)
          • Xanthomonas cassavae (isolates:4; rSTs:1)
          • Xanthomonas chitinilytica (isolates:1; rSTs:1)
          • Xanthomonas cissicola (isolates:2; rSTs:1)
          • Xanthomonas citri (isolates:533; rSTs:109 tree)
          • Xanthomonas codiaei (isolates:2; rSTs:2)
          • Xanthomonas cucurbitae (isolates:7; rSTs:3 tree)
          • Xanthomonas dyei (isolates:8; rSTs:5 tree)
          • Xanthomonas euroxanthea (isolates:14; rSTs:11 tree)
          • Xanthomonas euvesicatoria (isolates:236; rSTs:55 tree)
          • Xanthomonas floridensis (isolates:3; rSTs:1)
          • Xanthomonas fragariae (isolates:81; rSTs:11 tree)
          • Xanthomonas hawaiiensis (isolates:3; rSTs:2)
          • Xanthomonas hortorum (isolates:202; rSTs:43 tree)
          • Xanthomonas hyacinthi (isolates:2; rSTs:1)
          • Xanthomonas hydrangeae (isolates:5; rSTs:3 tree)
          • Xanthomonas indica (isolates:3; rSTs:2)
          • Xanthomonas maliensis (isolates:1; rSTs:1)
          • Xanthomonas massiliensis (isolates:2; rSTs:1)
          • Xanthomonas melonis (isolates:6; rSTs:4 tree)
          • Xanthomonas nasturtii (isolates:24; rSTs:11 tree)
          • Xanthomonas oryzae (isolates:460; rSTs:119 tree)
          • Xanthomonas perforans (isolates:529; rSTs:33 tree)
          • Xanthomonas phaseoli (isolates:161; rSTs:40 tree)
          • Xanthomonas pisi (isolates:1; rSTs:1)
          • Xanthomonas populi (isolates:1; rSTs:1)
          • Xanthomonas prunicola (isolates:10; rSTs:5 tree)
          • Xanthomonas rydalmerensis (isolates:5; rSTs:1)
          • Xanthomonas sacchari (isolates:6; rSTs:1)
          • Xanthomonas sontii (isolates:7; rSTs:4 tree)
          • Xanthomonas sp. (isolates:98; rSTs:69 tree)
          • Xanthomonas surreyensis (isolates:1; rSTs:1)
          • Xanthomonas theicola (isolates:2; rSTs:1)
          • Xanthomonas translucens (isolates:110; rSTs:59 tree)
          • Xanthomonas vasicola (isolates:124; rSTs:24 tree)
          • Xanthomonas vesicatoria (isolates:37; rSTs:7 tree)
        • Xylella (isolates:252; rSTs:52 tree)
          • Xylella fastidiosa (isolates:220; rSTs:48 tree)
          • Xylella taiwanensis (isolates:32; rSTs:4 tree)
      • Rhodanobacteraceae (isolates:184; rSTs:165 tree)
        • Aerosticca (isolates:1; rSTs:1)
          • Aerosticca soli (isolates:1; rSTs:1)
        • Ahniella (isolates:1; rSTs:1)
          • Ahniella affigens (isolates:1; rSTs:1)
        • Aquimonas (isolates:1; rSTs:1)
          • Aquimonas voraii (isolates:1; rSTs:1)
        • Chiayiivirga (isolates:1; rSTs:1)
          • Chiayiivirga flava (isolates:1; rSTs:1)
        • Dokdonella (isolates:6; rSTs:6 tree)
          • Dokdonella fugitiva (isolates:3; rSTs:3 tree)
          • Dokdonella immobilis (isolates:1; rSTs:1)
          • Dokdonella koreensis (isolates:1; rSTs:1)
          • Dokdonella soli (isolates:1; rSTs:1)
        • Dyella (isolates:55; rSTs:53 tree)
          • Dyella acidiphila (isolates:1; rSTs:1)
          • Dyella acidisoli (isolates:1; rSTs:1)
          • Dyella amyloliquefaciens (isolates:1; rSTs:1)
          • Dyella caseinilytica (isolates:2; rSTs:2)
          • Dyella choica (isolates:1; rSTs:1)
          • Dyella dinghuensis (isolates:1; rSTs:1)
          • Dyella flagellata (isolates:1; rSTs:1)
          • Dyella flava (isolates:2; rSTs:1)
          • Dyella ginsengisoli (isolates:1; rSTs:1)
          • Dyella halodurans (isolates:1; rSTs:1)
          • Dyella humicola (isolates:1; rSTs:1)
          • Dyella japonica (isolates:1; rSTs:1)
          • Dyella jiangningensis (isolates:1; rSTs:1)
          • Dyella kyungheensis (isolates:1; rSTs:1)
          • Dyella lipolytica (isolates:1; rSTs:1)
          • Dyella lutea (isolates:1; rSTs:1)
          • Dyella marensis (isolates:3; rSTs:2)
          • Dyella mobilis (isolates:2; rSTs:1)
          • Dyella monticola (isolates:1; rSTs:1)
          • Dyella nitratireducens (isolates:2; rSTs:2)
          • Dyella psychrodurans (isolates:1; rSTs:1)
          • Dyella sedimenti (isolates:1; rSTs:1)
          • Dyella silvae (isolates:1; rSTs:1)
          • Dyella silvatica (isolates:1; rSTs:1)
          • Dyella solisilvae (isolates:1; rSTs:1)
          • Dyella sp. (isolates:19; rSTs:20 tree)
          • Dyella subtropica (isolates:1; rSTs:1)
          • Dyella tabacisoli (isolates:1; rSTs:1)
          • Dyella telluris (isolates:1; rSTs:1)
          • Dyella terrae (isolates:1; rSTs:1)
          • Dyella thiooxydans (isolates:1; rSTs:1)
        • Frateuria (isolates:8; rSTs:7 tree)
          • Frateuria aurantia (isolates:1; rSTs:1)
          • Frateuria defendens (isolates:1; rSTs:1)
          • Frateuria edaphi (isolates:1; rSTs:1)
          • Frateuria flava (isolates:1; rSTs:1)
          • Frateuria soli (isolates:1; rSTs:1)
          • Frateuria sp. (isolates:1; rSTs:1)
          • Frateuria terrea (isolates:2; rSTs:1)
        • Fulvimonas (isolates:3; rSTs:2)
          • Fulvimonas soli (isolates:2; rSTs:1)
          • Fulvimonas sp. (isolates:1; rSTs:1)
        • Luteibacter (isolates:30; rSTs:29 tree)
          • Luteibacter aegosomaticola (isolates:1; rSTs:1)
          • Luteibacter aegosomatis (isolates:1; rSTs:1)
          • Luteibacter aegosomatissinici (isolates:1; rSTs:1)
          • Luteibacter anthropi (isolates:2; rSTs:2)
          • Luteibacter flocculans (isolates:1; rSTs:1)
          • Luteibacter jiangsuensis (isolates:1; rSTs:1)
          • Luteibacter mycovicinus (isolates:1; rSTs:1)
          • Luteibacter pinisoli (isolates:1; rSTs:1)
          • Luteibacter rhizovicinus (isolates:3; rSTs:1)
          • Luteibacter sp. (isolates:17; rSTs:18 tree)
          • Luteibacter yeojuensis (isolates:1; rSTs:1)
        • Metallibacterium (isolates:2; rSTs:1)
          • Metallibacterium scheffleri (isolates:2; rSTs:1)
        • Mizugakiibacter (isolates:1; rSTs:1)
          • Mizugakiibacter sediminis (isolates:1; rSTs:1)
        • Oleiagrimonas (isolates:5; rSTs:4 tree)
          • Oleiagrimonas citrea (isolates:1; rSTs:1)
          • Oleiagrimonas soli (isolates:2; rSTs:1)
          • Oleiagrimonas sp. (isolates:2; rSTs:2)
        • Pinirhizobacter (isolates:3; rSTs:3 tree)
          • Pinirhizobacter soli (isolates:3; rSTs:3 tree)
        • Pseudofulvimonas (isolates:3; rSTs:1)
          • Pseudofulvimonas gallinarii (isolates:3; rSTs:1)
        • Rhodanobacter (isolates:57; rSTs:47 tree)
          • Rhodanobacter caeni (isolates:1; rSTs:1)
          • Rhodanobacter denitrificans (isolates:10; rSTs:5 tree)
          • Rhodanobacter fulvus (isolates:1; rSTs:1)
          • Rhodanobacter glycinis (isolates:2; rSTs:2)
          • Rhodanobacter lindaniclasticus (isolates:1; rSTs:1)
          • Rhodanobacter panaciterrae (isolates:1; rSTs:1)
          • Rhodanobacter soli (isolates:2; rSTs:2)
          • Rhodanobacter sp. (isolates:35; rSTs:30 tree)
          • Rhodanobacter spathiphylli (isolates:1; rSTs:1)
          • Rhodanobacter thiooxydans (isolates:3; rSTs:3 tree)
        • Rudaea (isolates:2; rSTs:2)
          • Rudaea cellulosilytica (isolates:1; rSTs:1)
          • Rudaea sp. (isolates:1; rSTs:1)
        • Tahibacter (isolates:5; rSTs:5 tree)
          • Tahibacter amnicola (isolates:1; rSTs:1)
          • Tahibacter aquaticus (isolates:1; rSTs:1)
          • Tahibacter caeni (isolates:1; rSTs:1)
          • Tahibacter harae (isolates:1; rSTs:1)
          • Tahibacter soli (isolates:1; rSTs:1)
    • Methylococcales (isolates:117; rSTs:104 tree)
      • Crenotrichaceae (isolates:2; rSTs:1)
        • Crenothrix (isolates:2; rSTs:1)
          • Crenothrix polyspora (isolates:2; rSTs:1)
      • Methylococcaceae (isolates:112; rSTs:100 tree)
        • Candidatus Methylocalor (isolates:1)
          • Candidatus Methylocalor cossyra (isolates:1)
        • Candidatus Methylospira (isolates:2; rSTs:2)
          • Candidatus Methylospira mobilis (isolates:2; rSTs:2)
        • Methylicorpusculum (isolates:1; rSTs:1)
          • Methylicorpusculum oleiharenae (isolates:1; rSTs:1)
        • Methylobacter (isolates:17; rSTs:16 tree)
          • Candidatus Methylobacter favarea (isolates:1; rSTs:1)
          • Candidatus Methylobacter oryzae (isolates:1; rSTs:1)
          • Methylobacter luteus (isolates:1; rSTs:1)
          • Methylobacter marinus (isolates:1; rSTs:1)
          • Methylobacter psychrophilus (isolates:1; rSTs:1)
          • Methylobacter sp. (isolates:5; rSTs:4 tree)
          • Methylobacter svalbardensis (isolates:1; rSTs:1)
          • Methylobacter tundripaludum (isolates:5; rSTs:5 tree)
          • Methylobacter whittenburyi (isolates:1; rSTs:1)
        • Methylocaldum (isolates:9; rSTs:7 tree)
          • Methylocaldum marinum (isolates:1; rSTs:1)
          • Methylocaldum sp. (isolates:6; rSTs:4 tree)
          • Methylocaldum szegediense (isolates:2; rSTs:2)
        • Methylococcus (isolates:15; rSTs:13 tree)
          • Methylococcus capsulatus (isolates:9; rSTs:8 tree)
          • Methylococcus geothermalis (isolates:1; rSTs:1)
          • Methylococcus mesophilus (isolates:1; rSTs:1)
          • Methylococcus sp. (isolates:4; rSTs:3 tree)
        • Methylocucumis (isolates:1; rSTs:1)
          • Methylocucumis oryzae (isolates:1; rSTs:1)
        • Methylogaea (isolates:3; rSTs:2)
          • Methylogaea oryzae (isolates:3; rSTs:2)
        • Methyloglobulus (isolates:1; rSTs:1)
          • Methyloglobulus morosus (isolates:1; rSTs:1)
        • Methylomagnum (isolates:2; rSTs:2)
          • Methylomagnum ishizawai (isolates:2; rSTs:2)
        • Methylomarinum (isolates:2; rSTs:3 tree)
          • Methylomarinum sp. (isolates:1; rSTs:2)
          • Methylomarinum vadi (isolates:1; rSTs:1)
        • Methylomicrobium (isolates:6; rSTs:5 tree)
          • Methylomicrobium agile (isolates:1; rSTs:1)
          • Methylomicrobium album (isolates:2; rSTs:1)
          • Methylomicrobium lacus (isolates:1; rSTs:1)
          • Methylomicrobium sp. (isolates:2; rSTs:2)
        • Methylomonas (isolates:39; rSTs:35 tree)
          • Methylomonas albis (isolates:2; rSTs:1)
          • Methylomonas defluvii (isolates:1; rSTs:1)
          • Methylomonas denitrificans (isolates:1; rSTs:1)
          • Methylomonas koyamae (isolates:8; rSTs:7 tree)
          • Methylomonas lenta (isolates:1; rSTs:1)
          • Methylomonas methanica (isolates:2; rSTs:2)
          • Methylomonas montana (isolates:1; rSTs:1)
          • Methylomonas paludis (isolates:1; rSTs:1)
          • Methylomonas rapida (isolates:1; rSTs:1)
          • Methylomonas rhizoryzae (isolates:1; rSTs:1)
          • Methylomonas sp. (isolates:20; rSTs:18 tree)
        • Methyloprofundus (isolates:1; rSTs:1)
          • Methyloprofundus sedimenti (isolates:1; rSTs:1)
        • Methylosarcina (isolates:1; rSTs:1)
          • Methylosarcina fibrata (isolates:1; rSTs:1)
        • Methyloterricola (isolates:1; rSTs:1)
          • Methyloterricola oryzae (isolates:1; rSTs:1)
        • Methylotetracoccus (isolates:1; rSTs:1)
          • Methylotetracoccus oryzae (isolates:1; rSTs:1)
        • Methylotuvimicrobium (isolates:5; rSTs:4 tree)
          • Methylotuvimicrobium alcaliphilum (isolates:1; rSTs:1)
          • Methylotuvimicrobium buryatense (isolates:2; rSTs:1)
          • Methylotuvimicrobium kenyense (isolates:1; rSTs:1)
          • Methylotuvimicrobium sp. (isolates:1; rSTs:1)
        • Methylovulum (isolates:4; rSTs:4 tree)
          • Methylovulum miyakonense (isolates:1; rSTs:1)
          • Methylovulum psychrotolerans (isolates:3; rSTs:3 tree)
      • Methylothermaceae (isolates:3; rSTs:3 tree)
        • Methylohalobius (isolates:1; rSTs:1)
          • Methylohalobius crimeensis (isolates:1; rSTs:1)
        • Methylomarinovum (isolates:2; rSTs:2)
          • Methylomarinovum caldicuralii (isolates:1; rSTs:1)
          • Methylomarinovum tepidoasis (isolates:1; rSTs:1)
    • Methylohalomonadales (isolates:1; rSTs:1)
      • Methylohalomonadaceae (isolates:1; rSTs:1)
        • Methylohalomonas (isolates:1; rSTs:1)
          • Methylohalomonas lacus (isolates:1; rSTs:1)
    • Moraxellales (isolates:27464; rSTs:6385)
      • Moraxellaceae (isolates:27464; rSTs:6385)
        • Acinetobacter (isolates:25344; rSTs:5087)
          • Acinetobacter albensis (isolates:2; rSTs:2)
          • Acinetobacter amyesii (isolates:7; rSTs:6 tree)
          • Acinetobacter apis (isolates:1; rSTs:1)
          • Acinetobacter baretiae (isolates:2; rSTs:2)
          • Acinetobacter baumannii (isolates:22216; rSTs:2975)
          • Acinetobacter baylyi (isolates:19; rSTs:4 tree)
          • Acinetobacter beijerinckii (isolates:6; rSTs:5 tree)
          • Acinetobacter bereziniae (isolates:87; rSTs:58 tree)
          • Acinetobacter bohemicus (isolates:3; rSTs:3 tree)
          • Acinetobacter boissieri (isolates:1; rSTs:1)
          • Acinetobacter bouvetii (isolates:4; rSTs:1)
          • Acinetobacter brisouii (isolates:6; rSTs:4 tree)
          • Acinetobacter calcoaceticus (isolates:39; rSTs:40 tree)
          • Acinetobacter celticus (isolates:1; rSTs:1)
          • Acinetobacter chengduensis (isolates:1; rSTs:1)
          • Acinetobacter chinensis (isolates:3; rSTs:3 tree)
          • Acinetobacter colistiniresistens (isolates:15; rSTs:7 tree)
          • Acinetobacter courvalinii (isolates:12; rSTs:11 tree)
          • Acinetobacter cumulans (isolates:6; rSTs:6 tree)
          • Acinetobacter defluvii (isolates:2; rSTs:3 tree)
          • Acinetobacter dispersus (isolates:8; rSTs:8 tree)
          • Acinetobacter entericus (isolates:1; rSTs:1)
          • Acinetobacter equi (isolates:1; rSTs:1)
          • Acinetobacter faecalis (isolates:15; rSTs:15 tree)
          • Acinetobacter gandensis (isolates:2; rSTs:1)
          • Acinetobacter geminorum (isolates:2; rSTs:2)
          • Acinetobacter gerneri (isolates:12; rSTs:4 tree)
          • Acinetobacter guerrae (isolates:3; rSTs:3 tree)
          • Acinetobacter guillouiae (isolates:21; rSTs:17 tree)
          • Acinetobacter gyllenbergii (isolates:7; rSTs:5 tree)
          • Acinetobacter haemolyticus (isolates:65; rSTs:50 tree)
          • Acinetobacter halotolerans (isolates:1; rSTs:1)
          • Acinetobacter harbinensis (isolates:2; rSTs:2)
          • Acinetobacter higginsii (isolates:12; rSTs:12 tree)
          • Acinetobacter ihumii (isolates:1; rSTs:1)
          • Acinetobacter indicus (isolates:128; rSTs:106 tree)
          • Acinetobacter johnsonii (isolates:94; rSTs:87 tree)
          • Acinetobacter junii (isolates:97; rSTs:88 tree)
          • Acinetobacter kanungonis (isolates:1; rSTs:1)
          • Acinetobacter kookii (isolates:2; rSTs:1)
          • Acinetobacter kyonggiensis (isolates:1; rSTs:1)
          • Acinetobacter lactucae (isolates:19; rSTs:25 tree)
          • Acinetobacter lanii (isolates:2; rSTs:2)
          • Acinetobacter larvae (isolates:1; rSTs:1)
          • Acinetobacter lwoffii (isolates:61; rSTs:53 tree)
          • Acinetobacter marinus (isolates:1; rSTs:1)
          • Acinetobacter modestus (isolates:14; rSTs:11 tree)
          • Acinetobacter nectaris (isolates:5; rSTs:3 tree)
          • Acinetobacter nematophilus (isolates:1; rSTs:1)
          • Acinetobacter nosocomialis (isolates:304; rSTs:192 tree)
          • Acinetobacter oleivorans (isolates:43; rSTs:29 tree)
          • Acinetobacter parvus (isolates:6; rSTs:5 tree)
          • Acinetobacter pecorum (isolates:1; rSTs:1)
          • Acinetobacter piscicola (isolates:1; rSTs:1)
          • Acinetobacter pittii (isolates:765; rSTs:341 tree)
          • Acinetobacter pollinis (isolates:5; rSTs:2)
          • Acinetobacter populi (isolates:1; rSTs:1)
          • Acinetobacter portensis (isolates:2; rSTs:2)
          • Acinetobacter pragensis (isolates:1; rSTs:1)
          • Acinetobacter proteolyticus (isolates:5; rSTs:5 tree)
          • Acinetobacter pseudolwoffii (isolates:15; rSTs:15 tree)
          • Acinetobacter pullicarnis (isolates:1; rSTs:1)
          • Acinetobacter puyangensis (isolates:2; rSTs:1)
          • Acinetobacter qingfengensis (isolates:2; rSTs:1)
          • Acinetobacter radioresistens (isolates:72; rSTs:55 tree)
          • Acinetobacter rathckeae (isolates:2; rSTs:2)
          • Acinetobacter rongchengensis (isolates:1; rSTs:1)
          • Acinetobacter rudis (isolates:2; rSTs:1)
          • Acinetobacter schindleri (isolates:29; rSTs:26 tree)
          • Acinetobacter sedimenti (isolates:1; rSTs:1)
          • Acinetobacter seifertii (isolates:89; rSTs:60 tree)
          • Acinetobacter shaoyimingii (isolates:2; rSTs:2)
          • Acinetobacter sichuanensis (isolates:2; rSTs:2)
          • Acinetobacter silvestris (isolates:1; rSTs:1)
          • Acinetobacter soli (isolates:71; rSTs:58 tree)
          • Acinetobacter sp. (isolates:673; rSTs:464 tree)
          • Acinetobacter stercoris (isolates:1; rSTs:1)
          • Acinetobacter suaedae (isolates:1; rSTs:1)
          • Acinetobacter tandoii (isolates:5; rSTs:3 tree)
          • Acinetobacter terrae (isolates:8; rSTs:8 tree)
          • Acinetobacter terrestris (isolates:6; rSTs:6 tree)
          • Acinetobacter thutiue (isolates:3; rSTs:2)
          • Acinetobacter tianfuensis (isolates:1; rSTs:1)
          • Acinetobacter tibetensis (isolates:1; rSTs:1)
          • Acinetobacter tjernbergiae (isolates:3; rSTs:1)
          • Acinetobacter towneri (isolates:54; rSTs:35 tree)
          • Acinetobacter ursingii (isolates:103; rSTs:66 tree)
          • Acinetobacter variabilis (isolates:20; rSTs:22 tree)
          • Acinetobacter venetianus (isolates:13; rSTs:20 tree)
          • Acinetobacter vivianii (isolates:7; rSTs:6 tree)
          • Acinetobacter wanghuae (isolates:2; rSTs:1)
          • Acinetobacter wuhouensis (isolates:4; rSTs:4 tree)
        • Agitococcus (isolates:1; rSTs:1)
          • Agitococcus lubricus (isolates:1; rSTs:1)
        • Alkanindiges (isolates:3; rSTs:3 tree)
          • Alkanindiges hydrocarboniclasticus (isolates:1; rSTs:1)
          • Alkanindiges illinoisensis (isolates:2; rSTs:2)
        • Amnimonas (isolates:1; rSTs:1)
          • Amnimonas aquatica (isolates:1; rSTs:1)
        • Aquirhabdus (isolates:1; rSTs:1)
          • Aquirhabdus parva (isolates:1; rSTs:1)
        • Fluviicoccus (isolates:1; rSTs:1)
          • Fluviicoccus keumensis (isolates:1; rSTs:1)
        • Moraxella (isolates:1893; rSTs:1107 tree)
          • Moraxella atlantae (isolates:7; rSTs:5 tree)
          • Moraxella boevrei (isolates:1; rSTs:1)
          • Moraxella bovis (isolates:39; rSTs:18 tree)
          • Moraxella bovoculi (isolates:5; rSTs:184 tree)
          • Moraxella canis (isolates:5; rSTs:3 tree)
          • Moraxella caprae (isolates:2; rSTs:1)
          • Moraxella catarrhalis (isolates:1728; rSTs:788 tree)
          • Moraxella caviae (isolates:2; rSTs:1)
          • Moraxella cuniculi (isolates:3; rSTs:2)
          • Moraxella equi (isolates:2; rSTs:1)
          • Moraxella haemolytica (isolates:1; rSTs:1)
          • Moraxella lacunata (isolates:8; rSTs:6 tree)
          • Moraxella lincolnii (isolates:2; rSTs:2)
          • Moraxella macacae (isolates:1; rSTs:1)
          • Moraxella nasibovis (isolates:1; rSTs:1)
          • Moraxella nasicaprae (isolates:1; rSTs:1)
          • Moraxella nasovis (isolates:1; rSTs:1)
          • Moraxella nonliquefaciens (isolates:8; rSTs:7 tree)
          • Moraxella oblonga (isolates:1; rSTs:1)
          • Moraxella oculi (isolates:1; rSTs:1)
          • Moraxella osloensis (isolates:51; rSTs:51 tree)
          • Moraxella ovis (isolates:4; rSTs:3 tree)
          • Moraxella pluranimalium (isolates:1; rSTs:1)
          • Moraxella porci (isolates:2; rSTs:2)
          • Moraxella sp. (isolates:16; rSTs:24 tree)
        • Paraperlucidibaca (isolates:1; rSTs:1)
          • Paraperlucidibaca baekdonensis (isolates:1; rSTs:1)
        • Psychrobacter (isolates:219; rSTs:183 tree)
          • Psychrobacter aestuarii (isolates:2; rSTs:1)
          • Psychrobacter alimentarius (isolates:4; rSTs:3 tree)
          • Psychrobacter aquaticus (isolates:2; rSTs:1)
          • Psychrobacter aquimaris (isolates:2; rSTs:1)
          • Psychrobacter arcticus (isolates:2; rSTs:1)
          • Psychrobacter arenosus (isolates:1; rSTs:1)
          • Psychrobacter celer (isolates:4; rSTs:3 tree)
          • Psychrobacter cibarius (isolates:1; rSTs:1)
          • Psychrobacter ciconiae (isolates:2; rSTs:2)
          • Psychrobacter coccoides (isolates:1; rSTs:1)
          • Psychrobacter communis (isolates:1; rSTs:1)
          • Psychrobacter cryohalolentis (isolates:3; rSTs:1)
          • Psychrobacter faecalis (isolates:2; rSTs:1)
          • Psychrobacter fjordensis (isolates:1; rSTs:1)
          • Psychrobacter fozii (isolates:2; rSTs:2)
          • Psychrobacter frigidicola (isolates:3; rSTs:2)
          • Psychrobacter fulvigenes (isolates:1; rSTs:1)
          • Psychrobacter glaciei (isolates:3; rSTs:2)
          • Psychrobacter glacincola (isolates:1; rSTs:1)
          • Psychrobacter halodurans (isolates:1; rSTs:1)
          • Psychrobacter immobilis (isolates:5; rSTs:2)
          • Psychrobacter jeotgali (isolates:1; rSTs:1)
          • Psychrobacter luti (isolates:2; rSTs:1)
          • Psychrobacter lutiphocae (isolates:2; rSTs:1)
          • Psychrobacter maritimus (isolates:2; rSTs:2)
          • Psychrobacter muriicola (isolates:1; rSTs:1)
          • Psychrobacter namhaensis (isolates:3; rSTs:2)
          • Psychrobacter nivimaris (isolates:2; rSTs:2)
          • Psychrobacter okhotskensis (isolates:3; rSTs:3 tree)
          • Psychrobacter pacificensis (isolates:6; rSTs:4 tree)
          • Psychrobacter pasteurii (isolates:1; rSTs:1)
          • Psychrobacter phenylpyruvicus (isolates:4; rSTs:1)
          • Psychrobacter piechaudii (isolates:1; rSTs:1)
          • Psychrobacter piscatorii (isolates:2; rSTs:1)
          • Psychrobacter proteolyticus (isolates:4; rSTs:2)
          • Psychrobacter pulmonis (isolates:1; rSTs:1)
          • Psychrobacter pygoscelis (isolates:1; rSTs:1)
          • Psychrobacter raelei (isolates:1; rSTs:1)
          • Psychrobacter sanguinis (isolates:1; rSTs:1)
          • Psychrobacter sp. (isolates:133; rSTs:122 tree)
          • Psychrobacter submarinus (isolates:2; rSTs:2)
          • Psychrobacter urativorans (isolates:1; rSTs:1)
          • Psychrobacter vallis (isolates:1; rSTs:1)
    • Natronospirales (isolates:3; rSTs:3)
      • Natronospiraceae (isolates:3; rSTs:3)
        • Natronospira (isolates:3; rSTs:3)
          • Natronospira bacteriovora (isolates:1; rSTs:1)
          • Natronospira elongata (isolates:1; rSTs:1)
          • Natronospira proteinivora (isolates:1; rSTs:1)
    • Nevskiales (isolates:27; rSTs:25 tree)
      • Algiphilaceae (isolates:2; rSTs:2)
        • Algiphilus (isolates:1; rSTs:1)
          • Algiphilus aromaticivorans (isolates:1; rSTs:1)
        • Banduia (isolates:1; rSTs:1)
          • Banduia mediterranea (isolates:1; rSTs:1)
      • Nevskiaceae (isolates:25; rSTs:23 tree)
        • Flagellatimonas (isolates:1; rSTs:1)
          • Flagellatimonas centrodinii (isolates:1; rSTs:1)
        • Fontimonas (isolates:1; rSTs:1)
          • Fontimonas thermophila (isolates:1; rSTs:1)
        • Hydrocarboniphaga (isolates:2; rSTs:2)
          • Hydrocarboniphaga daqingensis (isolates:1; rSTs:1)
          • Hydrocarboniphaga effusa (isolates:1; rSTs:1)
        • Nevskia (isolates:2; rSTs:2)
          • Nevskia ramosa (isolates:1; rSTs:1)
          • Nevskia soli (isolates:1; rSTs:1)
        • Panacagrimonas (isolates:2; rSTs:1)
          • Panacagrimonas perspica (isolates:2; rSTs:1)
        • Polycyclovorans (isolates:1; rSTs:1)
          • Polycyclovorans algicola (isolates:1; rSTs:1)
        • Sinimarinibacterium (isolates:5; rSTs:4 tree)
          • Sinimarinibacterium flocculans (isolates:2; rSTs:1)
          • Sinimarinibacterium sp. (isolates:3; rSTs:3 tree)
        • Solimonas (isolates:9; rSTs:9 tree)
          • Solimonas aquatica (isolates:1; rSTs:1)
          • Solimonas flava (isolates:1; rSTs:1)
          • Solimonas fluminis (isolates:1; rSTs:1)
          • Solimonas marina (isolates:1; rSTs:1)
          • Solimonas soli (isolates:1; rSTs:1)
          • Solimonas sp. (isolates:2; rSTs:2)
          • Solimonas terrae (isolates:1; rSTs:1)
          • Solimonas variicoloris (isolates:1; rSTs:1)
        • Stagnimonas (isolates:1; rSTs:1)
          • Stagnimonas aquatica (isolates:1; rSTs:1)
        • Stenotrophobium (isolates:1; rSTs:1)
          • Stenotrophobium rhamnosiphilum (isolates:1; rSTs:1)
    • Oceanospirillales (isolates:819; rSTs:693 tree)
      • Aestuariirhabdaceae (isolates:3; rSTs:2)
        • Aestuariirhabdus (isolates:3; rSTs:2)
          • Aestuariirhabdus haliotis (isolates:2; rSTs:1)
          • Aestuariirhabdus litorea (isolates:1; rSTs:1)
      • Alcanivoracaceae (isolates:58; rSTs:49 tree)
        • Alcanivorax (isolates:29; rSTs:23 tree)
          • Alcanivorax borkumensis (isolates:1; rSTs:1)
          • Alcanivorax hongdengensis (isolates:1; rSTs:1)
          • Alcanivorax jadensis (isolates:1; rSTs:1)
          • Alcanivorax limicola (isolates:1; rSTs:1)
          • Alcanivorax nanhaiticus (isolates:1; rSTs:1)
          • Alcanivorax quisquiliarum (isolates:1; rSTs:1)
          • Alcanivorax sediminis (isolates:1; rSTs:1)
          • Alcanivorax sp. (isolates:21; rSTs:15 tree)
          • Alcanivorax xiamenensis (isolates:1; rSTs:1)
        • Alloalcanivorax (isolates:17; rSTs:15 tree)
          • Alloalcanivorax balearicus (isolates:1; rSTs:1)
          • Alloalcanivorax dieselolei (isolates:2; rSTs:1)
          • Alloalcanivorax gelatiniphagus (isolates:1; rSTs:1)
          • Alloalcanivorax marinus (isolates:1; rSTs:1)
          • Alloalcanivorax mobilis (isolates:1; rSTs:1)
          • Alloalcanivorax profundimaris (isolates:2; rSTs:2)
          • Alloalcanivorax venustensis (isolates:1; rSTs:1)
          • Alloalcanivorax xenomutans (isolates:8; rSTs:7 tree)
        • Isoalcanivorax (isolates:2; rSTs:3 tree)
          • Isoalcanivorax indicus (isolates:1; rSTs:1)
          • Isoalcanivorax pacificus (isolates:1; rSTs:2)
        • Marinicella (isolates:10; rSTs:8 tree)
          • Marinicella gelatinilytica (isolates:1; rSTs:1)
          • Marinicella litoralis (isolates:2; rSTs:1)
          • Marinicella marina (isolates:2; rSTs:2)
          • Marinicella meishanensis (isolates:1; rSTs:1)
          • Marinicella pacifica (isolates:2; rSTs:1)
          • Marinicella rhabdoformis (isolates:1; rSTs:1)
          • Marinicella sediminis (isolates:1; rSTs:1)
      • Balneatrichaceae (isolates:6; rSTs:5 tree)
        • Balneatrix (isolates:3; rSTs:2)
          • Balneatrix alpica (isolates:3; rSTs:2)
        • Pokkaliibacter (isolates:3; rSTs:3 tree)
          • Pokkaliibacter plantistimulans (isolates:2; rSTs:2)
          • Pokkaliibacter sp. (isolates:1; rSTs:1)
      • Endozoicomonadaceae (isolates:32; rSTs:26 tree)
        • Endozoicomonas (isolates:28; rSTs:22 tree)
          • Endozoicomonas acroporae (isolates:3; rSTs:3 tree)
          • Endozoicomonas arenosclerae (isolates:2; rSTs:1)
          • Endozoicomonas ascidiicola (isolates:2; rSTs:2)
          • Endozoicomonas atrinae (isolates:1; rSTs:1)
          • Endozoicomonas elysicola (isolates:2; rSTs:2)
          • Endozoicomonas euniceicola (isolates:1; rSTs:1)
          • Endozoicomonas gorgoniicola (isolates:1; rSTs:1)
          • Endozoicomonas montiporae (isolates:2; rSTs:1)
          • Endozoicomonas numazuensis (isolates:1; rSTs:1)
          • Endozoicomonas sp. (isolates:13; rSTs:9 tree)
        • Kistimonas (isolates:2; rSTs:2)
          • Kistimonas asteriae (isolates:1; rSTs:1)
          • Kistimonas scapharcae (isolates:1; rSTs:1)
        • Parendozoicomonas (isolates:2; rSTs:2)
          • Parendozoicomonas callyspongiae (isolates:1; rSTs:1)
          • Parendozoicomonas haliclonae (isolates:1; rSTs:1)
      • Hahellaceae (isolates:10; rSTs:9 tree)
        • Allohahella (isolates:1; rSTs:1)
          • Allohahella marinimesophila (isolates:1; rSTs:1)
        • Hahella (isolates:8; rSTs:7 tree)
          • Hahella chejuensis (isolates:1; rSTs:1)
          • Hahella ganghwensis (isolates:1; rSTs:1)
          • Hahella sp. (isolates:6; rSTs:5 tree)
        • Sansalvadorimonas (isolates:1; rSTs:1)
          • Sansalvadorimonas verongulae (isolates:1; rSTs:1)
      • Halomonadaceae (isolates:467; rSTs:389 tree)
        • Aidingimonas (isolates:3; rSTs:2)
          • Aidingimonas halophila (isolates:2; rSTs:1)
          • Aidingimonas lacisalsi (isolates:1; rSTs:1)
        • Billgrantia (isolates:26; rSTs:23 tree)
          • Billgrantia aerodenitrificans (isolates:1; rSTs:1)
          • Billgrantia antri (isolates:1; rSTs:1)
          • Billgrantia azerbaijanica (isolates:1; rSTs:1)
          • Billgrantia bachuensis (isolates:1; rSTs:1)
          • Billgrantia campisalis (isolates:2; rSTs:1)
          • Billgrantia desiderata (isolates:8; rSTs:7 tree)
          • Billgrantia endophytica (isolates:1; rSTs:1)
          • Billgrantia ethanolica (isolates:1; rSTs:1)
          • Billgrantia gudaonensis (isolates:1; rSTs:1)
          • Billgrantia kenyensis (isolates:2; rSTs:1)
          • Billgrantia lactosivorans (isolates:1; rSTs:1)
          • Billgrantia montanilacus (isolates:1; rSTs:1)
          • Billgrantia pellis (isolates:1; rSTs:1)
          • Billgrantia saliphila (isolates:1; rSTs:1)
          • Billgrantia sulfidoxydans (isolates:1; rSTs:1)
          • Billgrantia tianxiuensis (isolates:1; rSTs:1)
          • Billgrantia zhangzhouensis (isolates:1; rSTs:1)
        • Bisbaumannia (isolates:3; rSTs:3 tree)
          • Bisbaumannia pacifica (isolates:3; rSTs:3 tree)
        • Candidatus Carsonella (isolates:3)
          • Candidatus Carsonella ruddii (isolates:2)
          • Candidatus Carsonella ruddii (Diaphorina cf. continua) (isolates:1)
        • Candidatus Johnevansia (isolates:1)
          • Candidatus Johnevansia muelleri (isolates:1)
        • Candidatus Portiera (isolates:12; rSTs:1)
          • Candidatus Portiera aleyrodidarum (isolates:12; rSTs:1)
        • Carnimonas (isolates:1; rSTs:1)
          • Carnimonas nigrificans (isolates:1; rSTs:1)
        • Chromohalobacter (isolates:35; rSTs:25 tree)
          • Chromohalobacter beijerinckii (isolates:1; rSTs:1)
          • Chromohalobacter canadensis (isolates:6; rSTs:4 tree)
          • Chromohalobacter japonicus (isolates:3; rSTs:3 tree)
          • Chromohalobacter marismortui (isolates:1; rSTs:1)
          • Chromohalobacter moromii (isolates:3; rSTs:3 tree)
          • Chromohalobacter nigrandesensis (isolates:1; rSTs:1)
          • Chromohalobacter salexigens (isolates:7; rSTs:7 tree)
          • Chromohalobacter sarecensis (isolates:1; rSTs:1)
          • Chromohalobacter sp. (isolates:12; rSTs:4 tree)
        • Cobetia (isolates:42; rSTs:37 tree)
          • Cobetia amphilecti (isolates:8; rSTs:8 tree)
          • Cobetia crustatorum (isolates:1; rSTs:1)
          • Cobetia marina (isolates:6; rSTs:6 tree)
          • Cobetia pacifica (isolates:1; rSTs:1)
          • Cobetia sp. (isolates:26; rSTs:21 tree)
        • Franzmannia (isolates:2; rSTs:2)
          • Franzmannia pantelleriensis (isolates:1; rSTs:1)
          • Franzmannia qiaohouensis (isolates:1; rSTs:1)
        • Halomonas (isolates:187; rSTs:166 tree)
          • Halomonas aestuarii (isolates:1; rSTs:1)
          • Halomonas alimentaria (isolates:2; rSTs:2)
          • Halomonas alkaliantarctica (isolates:1; rSTs:1)
          • Halomonas alkalicola (isolates:2; rSTs:2)
          • Halomonas alkalisoli (isolates:2; rSTs:2)
          • Halomonas almeriensis (isolates:1; rSTs:1)
          • Halomonas axialensis (isolates:3; rSTs:3 tree)
          • Halomonas beimenensis (isolates:2; rSTs:2)
          • Halomonas binhaiensis (isolates:1; rSTs:1)
          • Halomonas campaniensis (isolates:1; rSTs:1)
          • Halomonas casei (isolates:2; rSTs:2)
          • Halomonas caseinilytica (isolates:5; rSTs:4 tree)
          • Halomonas cerina (isolates:1; rSTs:1)
          • Halomonas chromatireducens (isolates:1; rSTs:1)
          • Halomonas cibimaris (isolates:1; rSTs:1)
          • Halomonas citrativorans (isolates:3; rSTs:3 tree)
          • Halomonas colorata (isolates:2; rSTs:2)
          • Halomonas cupida (isolates:2; rSTs:1)
          • Halomonas daqiaonensis (isolates:1; rSTs:1)
          • Halomonas denitrificans (isolates:1; rSTs:1)
          • Halomonas dongshanensis (isolates:1; rSTs:1)
          • Halomonas elongata (isolates:9; rSTs:6 tree)
          • Halomonas eurihalina (isolates:2; rSTs:1)
          • Halomonas faecis (isolates:1; rSTs:1)
          • Halomonas flagellata (isolates:1; rSTs:1)
          • Halomonas fontilapidosi (isolates:1; rSTs:1)
          • Halomonas garicola (isolates:1; rSTs:1)
          • Halomonas gemina (isolates:1; rSTs:1)
          • Halomonas getboli (isolates:1; rSTs:1)
          • Halomonas halmophila (isolates:1; rSTs:1)
          • Halomonas halocynthiae (isolates:1; rSTs:1)
          • Halomonas halodenitrificans (isolates:1; rSTs:1)
          • Halomonas halophila (isolates:2; rSTs:1)
          • Halomonas heilongjiangensis (isolates:2; rSTs:1)
          • Halomonas hibernica (isolates:1; rSTs:1)
          • Halomonas huangheensis (isolates:2; rSTs:1)
          • Halomonas humidisoli (isolates:1; rSTs:1)
          • Halomonas hydrothermalis (isolates:1; rSTs:1)
          • Halomonas icarae (isolates:2; rSTs:1)
          • Halomonas jincaotanensis (isolates:1; rSTs:1)
          • Halomonas johnsoniae (isolates:1; rSTs:1)
          • Halomonas kalidii (isolates:2; rSTs:2)
          • Halomonas koreensis (isolates:1; rSTs:1)
          • Halomonas korlensis (isolates:1; rSTs:1)
          • Halomonas litopenaei (isolates:3; rSTs:3 tree)
          • Halomonas llamarensis (isolates:1; rSTs:1)
          • Halomonas lysinitropha (isolates:1; rSTs:1)
          • Halomonas marinisediminis (isolates:1; rSTs:1)
          • Halomonas maura (isolates:1)
          • Halomonas meridiana (isolates:6; rSTs:3 tree)
          • Halomonas mongoliensis (isolates:1; rSTs:1)
          • Halomonas nitroreducens (isolates:1; rSTs:1)
          • Halomonas organivorans (isolates:1; rSTs:1)
          • Halomonas piscis (isolates:3; rSTs:3 tree)
          • Halomonas profundus (isolates:1; rSTs:1)
          • Halomonas qaidamensis (isolates:1; rSTs:1)
          • Halomonas ramblicola (isolates:1; rSTs:1)
          • Halomonas rhizosphaerae (isolates:2; rSTs:2)
          • Halomonas sabkhae (isolates:1; rSTs:1)
          • Halomonas saccharevitans (isolates:2; rSTs:2)
          • Halomonas salina (isolates:1; rSTs:1)
          • Halomonas salinarum (isolates:1; rSTs:1)
          • Halomonas salipaludis (isolates:1; rSTs:1)
          • Halomonas shengliensis (isolates:1; rSTs:1)
          • Halomonas smyrnensis (isolates:1; rSTs:1)
          • Halomonas socia (isolates:1; rSTs:1)
          • Halomonas sp. (isolates:71; rSTs:66 tree)
          • Halomonas stenophila (isolates:1; rSTs:1)
          • Halomonas sulfidivorans (isolates:1; rSTs:1)
          • Halomonas urmiana (isolates:1; rSTs:1)
          • Halomonas urumqiensis (isolates:3; rSTs:1)
          • Halomonas ventosae (isolates:3; rSTs:3 tree)
          • Halomonas zhuhanensis (isolates:1; rSTs:1)
        • Halotalea (isolates:2; rSTs:2)
          • Halotalea alkalilenta (isolates:2; rSTs:2)
        • Halovibrio (isolates:3; rSTs:3 tree)
          • Halovibrio salipaludis (isolates:1; rSTs:1)
          • Halovibrio sp. (isolates:1; rSTs:1)
          • Halovibrio variabilis (isolates:1; rSTs:1)
        • Kushneria (isolates:11; rSTs:10 tree)
          • Kushneria aurantia (isolates:1; rSTs:1)
          • Kushneria avicenniae (isolates:1; rSTs:1)
          • Kushneria indalinina (isolates:1; rSTs:1)
          • Kushneria konosiri (isolates:1; rSTs:1)
          • Kushneria marisflavi (isolates:2; rSTs:1)
          • Kushneria pakistanensis (isolates:1; rSTs:1)
          • Kushneria phosphatilytica (isolates:2; rSTs:2)
          • Kushneria phyllosphaerae (isolates:1; rSTs:1)
          • Kushneria sinocarnis (isolates:1; rSTs:1)
        • Larsenimonas (isolates:5; rSTs:4 tree)
          • Larsenimonas rhizosphaerae (isolates:2; rSTs:2)
          • Larsenimonas salina (isolates:1; rSTs:1)
          • Larsenimonas suaedae (isolates:2; rSTs:1)
        • Litchfieldella (isolates:5; rSTs:3 tree)
          • Litchfieldella anticariensis (isolates:3; rSTs:1)
          • Litchfieldella qijiaojingensis (isolates:1; rSTs:1)
          • Litchfieldella xinjiangensis (isolates:1; rSTs:1)
        • Modicisalibacter (isolates:14; rSTs:11 tree)
          • Modicisalibacter coralii (isolates:1; rSTs:2)
          • Modicisalibacter ilicicola (isolates:1; rSTs:1)
          • Modicisalibacter luteus (isolates:2; rSTs:1)
          • Modicisalibacter muralis (isolates:1; rSTs:1)
          • Modicisalibacter sp. (isolates:3; rSTs:1)
          • Modicisalibacter tunisiensis (isolates:2; rSTs:2)
          • Modicisalibacter xianhensis (isolates:2; rSTs:2)
          • Modicisalibacter zincidurans (isolates:2; rSTs:1)
        • Onishia (isolates:4; rSTs:4 tree)
          • Onishia niordana (isolates:1; rSTs:1)
          • Onishia taeanensis (isolates:3; rSTs:3 tree)
        • Phytohalomonas (isolates:1; rSTs:1)
          • Phytohalomonas tamaricis (isolates:1; rSTs:1)
        • Pistricoccus (isolates:1; rSTs:1)
          • Pistricoccus aurantiacus (isolates:1; rSTs:1)
        • Salicola (isolates:1; rSTs:1)
          • Salicola sp. (isolates:1; rSTs:1)
        • Salinicola (isolates:30; rSTs:28 tree)
          • Salinicola acroporae (isolates:2; rSTs:1)
          • Salinicola aestuarinus (isolates:1; rSTs:1)
          • Salinicola corii (isolates:1; rSTs:1)
          • Salinicola endophyticus (isolates:2; rSTs:2)
          • Salinicola halimionae (isolates:1; rSTs:1)
          • Salinicola halophilus (isolates:1; rSTs:1)
          • Salinicola halophyticus (isolates:1; rSTs:1)
          • Salinicola lusitanus (isolates:2; rSTs:2)
          • Salinicola peritrichatus (isolates:1; rSTs:1)
          • Salinicola rhizosphaerae (isolates:1; rSTs:1)
          • Salinicola salarius (isolates:3; rSTs:3 tree)
          • Salinicola socius (isolates:2; rSTs:2)
          • Salinicola sp. (isolates:11; rSTs:10 tree)
          • Salinicola tamaricis (isolates:1; rSTs:1)
        • Vreelandella (isolates:73; rSTs:60 tree)
          • Vreelandella alkaliphila (isolates:4; rSTs:3 tree)
          • Vreelandella andesensis (isolates:1; rSTs:1)
          • Vreelandella aquamarina (isolates:1; rSTs:1)
          • Vreelandella arcis (isolates:1; rSTs:1)
          • Vreelandella azerica (isolates:1; rSTs:1)
          • Vreelandella boliviensis (isolates:2; rSTs:1)
          • Vreelandella glaciei (isolates:1; rSTs:1)
          • Vreelandella gomseomensis (isolates:1; rSTs:1)
          • Vreelandella hamiltonii (isolates:1; rSTs:1)
          • Vreelandella janggokensis (isolates:3; rSTs:2)
          • Vreelandella jeotgali (isolates:1; rSTs:1)
          • Vreelandella lionensis (isolates:1; rSTs:1)
          • Vreelandella lutescens (isolates:1; rSTs:1)
          • Vreelandella malpeensis (isolates:1; rSTs:1)
          • Vreelandella maris (isolates:1; rSTs:1)
          • Vreelandella massiliensis (isolates:1; rSTs:1)
          • Vreelandella nanhaiensis (isolates:1; rSTs:1)
          • Vreelandella neptunia (isolates:6; rSTs:3 tree)
          • Vreelandella nigrificans (isolates:1; rSTs:1)
          • Vreelandella olivaria (isolates:1; rSTs:1)
          • Vreelandella piezotolerans (isolates:3; rSTs:2)
          • Vreelandella populi (isolates:3; rSTs:3 tree)
          • Vreelandella profundi (isolates:3; rSTs:2)
          • Vreelandella rituensis (isolates:1; rSTs:1)
          • Vreelandella salicampi (isolates:1; rSTs:1)
          • Vreelandella sedimenti (isolates:1; rSTs:1)
          • Vreelandella songnenensis (isolates:1; rSTs:1)
          • Vreelandella sp. (isolates:1; rSTs:1)
          • Vreelandella stevensii (isolates:1; rSTs:1)
          • Vreelandella subglaciescola (isolates:1; rSTs:1)
          • Vreelandella subterranea (isolates:1; rSTs:1)
          • Vreelandella sulfidaeris (isolates:2; rSTs:2)
          • Vreelandella titanicae (isolates:7; rSTs:6 tree)
          • Vreelandella utahensis (isolates:2; rSTs:1)
          • Vreelandella venusta (isolates:11; rSTs:8 tree)
          • Vreelandella vilamensis (isolates:1; rSTs:1)
          • Vreelandella zhanjiangensis (isolates:1; rSTs:1)
          • Vreelandella zhaodongensis (isolates:1; rSTs:1)
        • Zymobacter (isolates:2; rSTs:1)
          • Zymobacter palmae (isolates:2; rSTs:1)
      • Litorivicinaceae (isolates:1; rSTs:1)
        • Litorivicinus (isolates:1; rSTs:1)
          • Litorivicinus lipolyticus (isolates:1; rSTs:1)
      • Natronospirillaceae (isolates:1; rSTs:1)
        • Natronospirillum (isolates:1; rSTs:1)
          • Natronospirillum operosum (isolates:1; rSTs:1)
      • Oceanospirillaceae (isolates:210; rSTs:185 tree)
        • Aliamphritea (isolates:3; rSTs:3 tree)
          • Aliamphritea ceti (isolates:1; rSTs:1)
          • Aliamphritea hakodatensis (isolates:1; rSTs:1)
          • Aliamphritea spongicola (isolates:1; rSTs:1)
        • Allopseudospirillum (isolates:1; rSTs:1)
          • Allopseudospirillum japonicum (isolates:1; rSTs:1)
        • Amphritea (isolates:12; rSTs:8 tree)
          • Amphritea atlantica (isolates:2; rSTs:1)
          • Amphritea balenae (isolates:2; rSTs:1)
          • Amphritea japonica (isolates:3; rSTs:1)
          • Amphritea opalescens (isolates:1; rSTs:1)
          • Amphritea pacifica (isolates:2; rSTs:2)
          • Amphritea sp. (isolates:2; rSTs:2)
        • Bacterioplanes (isolates:2; rSTs:1)
          • Bacterioplanes sanyensis (isolates:2; rSTs:1)
        • Bacterioplanoides (isolates:1; rSTs:1)
          • Bacterioplanoides sp. (isolates:1; rSTs:1)
        • Bermanella (isolates:2; rSTs:1)
          • Bermanella marisrubri (isolates:2; rSTs:1)
        • Litoribacillus (isolates:1; rSTs:1)
          • Litoribacillus peritrichatus (isolates:1; rSTs:1)
        • Litoribrevibacter (isolates:1; rSTs:1)
          • Litoribrevibacter albus (isolates:1; rSTs:1)
        • Maribrevibacterium (isolates:1; rSTs:1)
          • Maribrevibacterium harenarium (isolates:1; rSTs:1)
        • Marinobacterium (isolates:28; rSTs:26 tree)
          • Marinobacterium aestuarii (isolates:1; rSTs:1)
          • Marinobacterium alkalitolerans (isolates:1; rSTs:1)
          • Marinobacterium arenosum (isolates:1; rSTs:1)
          • Marinobacterium halophilum (isolates:1; rSTs:1)
          • Marinobacterium iners (isolates:2; rSTs:2)
          • Marinobacterium jannaschii (isolates:1; rSTs:1)
          • Marinobacterium lacunae (isolates:1; rSTs:1)
          • Marinobacterium litorale (isolates:1; rSTs:1)
          • Marinobacterium lutimaris (isolates:1; rSTs:1)
          • Marinobacterium mangrovicola (isolates:1; rSTs:1)
          • Marinobacterium marinum (isolates:1; rSTs:1)
          • Marinobacterium maritimum (isolates:1; rSTs:1)
          • Marinobacterium nitratireducens (isolates:1; rSTs:1)
          • Marinobacterium profundum (isolates:1; rSTs:1)
          • Marinobacterium ramblicola (isolates:1; rSTs:1)
          • Marinobacterium rhizophilum (isolates:2; rSTs:1)
          • Marinobacterium sedimentorum (isolates:1; rSTs:1)
          • Marinobacterium sediminicola (isolates:3; rSTs:1)
          • Marinobacterium sp. (isolates:2; rSTs:3 tree)
          • Marinobacterium stanieri (isolates:2; rSTs:2)
          • Marinobacterium weihaiense (isolates:1; rSTs:1)
          • Marinobacterium zhoushanense (isolates:1; rSTs:1)
        • Marinomonas (isolates:74; rSTs:67 tree)
          • Marinomonas agarivorans (isolates:1; rSTs:1)
          • Marinomonas alcarazii (isolates:1; rSTs:1)
          • Marinomonas algarum (isolates:1; rSTs:1)
          • Marinomonas algicola (isolates:1; rSTs:1)
          • Marinomonas aquimarina (isolates:2; rSTs:1)
          • Marinomonas aquiplantarum (isolates:1; rSTs:1)
          • Marinomonas arctica (isolates:3; rSTs:2)
          • Marinomonas arenicola (isolates:3; rSTs:3 tree)
          • Marinomonas atlantica (isolates:1; rSTs:1)
          • Marinomonas balearica (isolates:1; rSTs:1)
          • Marinomonas colpomeniae (isolates:1; rSTs:1)
          • Marinomonas communis (isolates:2; rSTs:2)
          • Marinomonas flavescens (isolates:1; rSTs:1)
          • Marinomonas foliarum (isolates:2; rSTs:2)
          • Marinomonas fungiae (isolates:2; rSTs:1)
          • Marinomonas gallaica (isolates:3; rSTs:2)
          • Marinomonas hwangdonensis (isolates:1; rSTs:1)
          • Marinomonas lutimaris (isolates:1; rSTs:1)
          • Marinomonas maritima (isolates:1; rSTs:1)
          • Marinomonas mediterranea (isolates:4; rSTs:3 tree)
          • Marinomonas ostreistagni (isolates:1; rSTs:1)
          • Marinomonas phaeophyticola (isolates:1; rSTs:1)
          • Marinomonas piezotolerans (isolates:1; rSTs:1)
          • Marinomonas polaris (isolates:1; rSTs:1)
          • Marinomonas pollencensis (isolates:1; rSTs:1)
          • Marinomonas pontica (isolates:2; rSTs:2)
          • Marinomonas posidonica (isolates:1; rSTs:1)
          • Marinomonas primoryensis (isolates:4; rSTs:3 tree)
          • Marinomonas profundi (isolates:2; rSTs:1)
          • Marinomonas profundimaris (isolates:1; rSTs:1)
          • Marinomonas rhizomae (isolates:2; rSTs:1)
          • Marinomonas rhodophyticola (isolates:1; rSTs:1)
          • Marinomonas sargassi (isolates:1; rSTs:1)
          • Marinomonas shanghaiensis (isolates:1; rSTs:1)
          • Marinomonas sp. (isolates:15; rSTs:16 tree)
          • Marinomonas spartinae (isolates:3; rSTs:3 tree)
          • Marinomonas transparens (isolates:1; rSTs:1)
          • Marinomonas ushuaiensis (isolates:1; rSTs:1)
          • Marinomonas vulgaris (isolates:1; rSTs:1)
        • Marinospirillum (isolates:6; rSTs:5 tree)
          • Marinospirillum alkaliphilum (isolates:1; rSTs:1)
          • Marinospirillum celere (isolates:1; rSTs:1)
          • Marinospirillum insulare (isolates:2; rSTs:1)
          • Marinospirillum minutulum (isolates:1; rSTs:1)
          • Marinospirillum perlucidum (isolates:1; rSTs:1)
        • Motiliproteus (isolates:3; rSTs:4 tree)
          • Motiliproteus coralliicola (isolates:1; rSTs:1)
          • Motiliproteus sediminis (isolates:1; rSTs:1)
          • Motiliproteus sp. (isolates:1; rSTs:2)
        • Neptuniibacter (isolates:8; rSTs:7 tree)
          • Neptuniibacter caesariensis (isolates:1; rSTs:1)
          • Neptuniibacter halophilus (isolates:1; rSTs:1)
          • Neptuniibacter marinus (isolates:1; rSTs:1)
          • Neptuniibacter pectenicola (isolates:2; rSTs:2)
          • Neptuniibacter sp. (isolates:3; rSTs:2)
        • Neptunomonas (isolates:19; rSTs:16 tree)
          • Neptunomonas antarctica (isolates:2; rSTs:1)
          • Neptunomonas concharum (isolates:2; rSTs:1)
          • Neptunomonas japonica (isolates:2; rSTs:2)
          • Neptunomonas marina (isolates:1; rSTs:1)
          • Neptunomonas phycophila (isolates:8; rSTs:8 tree)
          • Neptunomonas qingdaonensis (isolates:2; rSTs:1)
          • Neptunomonas sp. (isolates:2; rSTs:2)
        • Nitrincola (isolates:9; rSTs:9 tree)
          • Nitrincola alkalilacustris (isolates:1; rSTs:1)
          • Nitrincola alkalisediminis (isolates:1; rSTs:1)
          • Nitrincola iocasae (isolates:1; rSTs:1)
          • Nitrincola lacisaponensis (isolates:1; rSTs:1)
          • Nitrincola nitratireducens (isolates:1; rSTs:1)
          • Nitrincola schmidtii (isolates:1; rSTs:1)
          • Nitrincola sp. (isolates:1; rSTs:1)
          • Nitrincola tapanii (isolates:1; rSTs:1)
          • Nitrincola tibetensis (isolates:1; rSTs:1)
        • Oceaniserpentilla (isolates:1; rSTs:1)
          • Oceaniserpentilla sp. (isolates:1; rSTs:1)
        • Oceanobacter (isolates:7; rSTs:6 tree)
          • Oceanobacter kriegii (isolates:1; rSTs:1)
          • Oceanobacter mangrovi (isolates:1; rSTs:1)
          • Oceanobacter sp. (isolates:5; rSTs:4 tree)
        • Oceanospirillum (isolates:8; rSTs:6 tree)
          • Oceanospirillum beijerinckii (isolates:1; rSTs:1)
          • Oceanospirillum linum (isolates:2; rSTs:1)
          • Oceanospirillum maris (isolates:1; rSTs:1)
          • Oceanospirillum multiglobuliferum (isolates:2; rSTs:1)
          • Oceanospirillum sanctuarii (isolates:1; rSTs:1)
          • Oceanospirillum sediminis (isolates:1; rSTs:1)
        • Oleispira (isolates:1; rSTs:1)
          • Oleispira antarctica (isolates:1; rSTs:1)
        • Parathalassolituus (isolates:1; rSTs:1)
          • Parathalassolituus penaei (isolates:1; rSTs:1)
        • Pontibacterium (isolates:2; rSTs:2)
          • Pontibacterium granulatum (isolates:1; rSTs:1)
          • Pontibacterium sinense (isolates:1; rSTs:1)
        • Thalassolituus (isolates:15; rSTs:13 tree)
          • Oleibacter sp. HI0075 (isolates:1; rSTs:1)
          • Thalassolituus alkanivorans (isolates:2; rSTs:1)
          • Thalassolituus hydrocarboniclasticus (isolates:1; rSTs:1)
          • Thalassolituus marinus (isolates:1; rSTs:1)
          • Thalassolituus maritimus (isolates:2; rSTs:2)
          • Thalassolituus oleivorans (isolates:4; rSTs:4 tree)
          • Thalassolituus pacificus (isolates:1; rSTs:1)
          • Thalassolituus sp. (isolates:3; rSTs:2)
        • Venatoribacter (isolates:2; rSTs:2)
          • Venatoribacter cucullus (isolates:2; rSTs:2)
      • Oleiphilaceae (isolates:1; rSTs:1)
        • Oleiphilus (isolates:1; rSTs:1)
          • Oleiphilus messinensis (isolates:1; rSTs:1)
      • Pleioneaceae (isolates:5; rSTs:5 tree)
        • Aliikangiella (isolates:2; rSTs:2)
          • Aliikangiella coralliicola (isolates:1; rSTs:1)
          • Aliikangiella marina (isolates:1; rSTs:1)
        • Pleionea (isolates:3; rSTs:3 tree)
          • Pleionea litopenaei (isolates:1; rSTs:1)
          • Pleionea mediterranea (isolates:1; rSTs:1)
          • Pleionea sediminis (isolates:1; rSTs:1)
      • Saccharospirillaceae (isolates:13; rSTs:11 tree)
        • Gynuella (isolates:1; rSTs:1)
          • Gynuella sunshinyii (isolates:1; rSTs:1)
        • Reinekea (isolates:5; rSTs:4 tree)
          • Reinekea blandensis (isolates:1)
          • Reinekea forsetii (isolates:1; rSTs:1)
          • Reinekea marina (isolates:1; rSTs:1)
          • Reinekea marinisedimentorum (isolates:1; rSTs:1)
          • Reinekea thalattae (isolates:1; rSTs:1)
        • Saccharospirillum (isolates:6; rSTs:5 tree)
          • Saccharospirillum alexandrii (isolates:1; rSTs:1)
          • Saccharospirillum impatiens (isolates:1; rSTs:1)
          • Saccharospirillum mangrovi (isolates:2; rSTs:1)
          • Saccharospirillum salsuginis (isolates:1; rSTs:1)
          • Saccharospirillum sp. (isolates:1; rSTs:1)
        • Salinibius (isolates:1; rSTs:1)
          • Salinibius halmophilus (isolates:1; rSTs:1)
      • Zooshikellaceae (isolates:9; rSTs:7 tree)
        • Spartinivicinus (isolates:4; rSTs:3 tree)
          • Spartinivicinus marinus (isolates:2; rSTs:1)
          • Spartinivicinus poritis (isolates:1; rSTs:1)
          • Spartinivicinus ruber (isolates:1; rSTs:1)
        • Zooshikella (isolates:5; rSTs:4 tree)
          • Zooshikella ganghwensis (isolates:4; rSTs:3 tree)
          • Zooshikella harenae (isolates:1; rSTs:1)
    • Orbales (isolates:191; rSTs:117 tree)
      • Orbaceae (isolates:191; rSTs:117 tree)
        • Candidatus Schmidhempelia (isolates:1; rSTs:1)
          • Candidatus Schmidhempelia bombi (isolates:1; rSTs:1)
        • Frischella (isolates:5; rSTs:4 tree)
          • Frischella japonica (isolates:1; rSTs:1)
          • Frischella perrara (isolates:3; rSTs:2)
          • Frischella sp. (isolates:1; rSTs:1)
        • Gilliamella (isolates:182; rSTs:109 tree)
          • Gilliamella apicola (isolates:34; rSTs:12 tree)
          • Gilliamella apis (isolates:24; rSTs:13 tree)
          • Gilliamella bombi (isolates:1; rSTs:1)
          • Gilliamella bombicola (isolates:1; rSTs:1)
          • Gilliamella intestini (isolates:1; rSTs:1)
          • Gilliamella mensalis (isolates:1; rSTs:1)
          • Gilliamella sp. (isolates:120; rSTs:80 tree)
        • Orbus (isolates:2; rSTs:2)
          • Orbus hercynius (isolates:1; rSTs:1)
          • Orbus sasakiae (isolates:1; rSTs:1)
        • Zophobihabitans (isolates:1; rSTs:1)
          • Zophobihabitans entericus (isolates:1; rSTs:1)
    • Pasteurellales (isolates:10400; rSTs:4476)
      • Pasteurellaceae (isolates:10397; rSTs:4474)
        • Actinobacillus (isolates:329; rSTs:123 tree)
          • Actinobacillus arthritidis (isolates:1; rSTs:1)
          • Actinobacillus capsulatus (isolates:1; rSTs:1)
          • Actinobacillus delphinicola (isolates:2; rSTs:2)
          • Actinobacillus equuli (isolates:27; rSTs:24 tree)
          • Actinobacillus lignieresii (isolates:3; rSTs:3 tree)
          • Actinobacillus minor (isolates:1; rSTs:1)
          • Actinobacillus pleuropneumoniae (isolates:269; rSTs:75 tree)
          • Actinobacillus porcinus (isolates:2; rSTs:1)
          • Actinobacillus porcitonsillarum (isolates:1; rSTs:1)
          • Actinobacillus seminis (isolates:2; rSTs:1)
          • Actinobacillus succinogenes (isolates:2; rSTs:2)
          • Actinobacillus suis (isolates:14; rSTs:7 tree)
          • Actinobacillus ureae (isolates:3; rSTs:3 tree)
          • Actinobacillus vicugnae (isolates:1; rSTs:1)
        • Aggregatibacter (isolates:229; rSTs:164 tree)
          • Aggregatibacter actinomycetemcomitans (isolates:184; rSTs:129 tree)
          • Aggregatibacter aphrophilus (isolates:20; rSTs:16 tree)
          • Aggregatibacter kilianii (isolates:10; rSTs:4 tree)
          • Aggregatibacter segnis (isolates:11; rSTs:11 tree)
          • Aggregatibacter sp. (isolates:4; rSTs:4 tree)
        • Avibacterium (isolates:100; rSTs:27 tree)
          • Avibacterium avium (isolates:1; rSTs:1)
          • Avibacterium endocarditidis (isolates:1; rSTs:1)
          • Avibacterium gallinarum (isolates:3; rSTs:1)
          • Avibacterium paragallinarum (isolates:88; rSTs:19 tree)
          • Avibacterium sp. (isolates:6; rSTs:4 tree)
          • Avibacterium volantium (isolates:1; rSTs:1)
        • Basfia (isolates:3; rSTs:2)
          • Basfia succiniciproducens (isolates:2; rSTs:1)
          • [Mannheimia] succiniciproducens (isolates:1; rSTs:1)
        • Bibersteinia (isolates:8; rSTs:6 tree)
          • Bibersteinia trehalosi (isolates:8; rSTs:6 tree)
        • Bisgaardia (isolates:2; rSTs:1)
          • Bisgaardia hudsonensis (isolates:2; rSTs:1)
        • Canicola (isolates:5; rSTs:3 tree)
          • Canicola haemoglobinophilus (isolates:5; rSTs:3 tree)
        • Caviibacterium (isolates:1; rSTs:1)
          • Caviibacterium pharyngocola (isolates:1; rSTs:1)
        • Chelonobacter (isolates:2; rSTs:2)
          • Chelonobacter oris (isolates:2; rSTs:2)
        • Conservatibacter (isolates:1; rSTs:1)
          • Conservatibacter flavescens (isolates:1; rSTs:1)
        • Cricetibacter (isolates:1; rSTs:1)
          • Cricetibacter osteomyelitidis (isolates:1; rSTs:1)
        • Exercitatus (isolates:15; rSTs:13 tree)
          • Exercitatus varius (isolates:15; rSTs:13 tree)
        • Frederiksenia (isolates:2; rSTs:1)
          • Frederiksenia canicola (isolates:2; rSTs:1)
        • Gallibacterium (isolates:107; rSTs:62 tree)
          • Gallibacterium anatis (isolates:95; rSTs:50 tree)
          • Gallibacterium genomosp. 1 (isolates:3; rSTs:3 tree)
          • Gallibacterium genomosp. 2 (isolates:1; rSTs:1)
          • Gallibacterium genomosp. 3 (isolates:3; rSTs:3 tree)
          • Gallibacterium salpingitidis (isolates:4; rSTs:4 tree)
          • Gallibacterium sp. (isolates:1; rSTs:1 tree)
        • Glaesserella (isolates:677; rSTs:454 tree)
          • Glaesserella australis (isolates:1; rSTs:1)
          • Glaesserella parasuis (isolates:675; rSTs:453 tree)
          • Glaesserella sp. (isolates:1)
        • Haemophilus (isolates:5650; rSTs:2877)
          • Haemophilus haemolyticus (isolates:49; rSTs:90 tree)
          • Haemophilus influenzae (isolates:5459; rSTs:2583)
          • Haemophilus massiliensis (isolates:1; rSTs:1)
          • Haemophilus paracuniculus (isolates:1; rSTs:1)
          • Haemophilus parahaemolyticus (isolates:9; rSTs:7 tree)
          • Haemophilus parainfluenzae (isolates:60; rSTs:81 tree)
          • Haemophilus paraphrohaemolyticus (isolates:4; rSTs:2)
          • Haemophilus pittmaniae (isolates:2; rSTs:2)
          • Haemophilus quentini (isolates:3; rSTs:1)
          • Haemophilus seminalis (isolates:4; rSTs:4 tree)
          • Haemophilus sp. (isolates:21; rSTs:83 tree)
          • Haemophilus sputorum (isolates:6; rSTs:5 tree)
          • [Haemophilus] ducreyi (isolates:31; rSTs:17 tree)
        • Histophilus (isolates:66; rSTs:19 tree)
          • Histophilus somni (isolates:66; rSTs:19 tree)
        • Lonepinella (isolates:4; rSTs:2)
          • Lonepinella koalarum (isolates:4; rSTs:2)
        • Mannheimia (isolates:1852; rSTs:139 tree)
          • Mannheimia bovis (isolates:1; rSTs:1)
          • Mannheimia cairinae (isolates:2; rSTs:1)
          • Mannheimia granulomatis (isolates:6; rSTs:5 tree)
          • Mannheimia haemolytica (isolates:1822; rSTs:110 tree)
          • Mannheimia indoligenes (isolates:8; rSTs:8 tree)
          • Mannheimia pernigra (isolates:4; rSTs:4 tree)
          • Mannheimia sp. (isolates:2; rSTs:3 tree)
          • Mannheimia varigena (isolates:7; rSTs:7 tree)
        • Mergibacter (isolates:6; rSTs:4 tree)
          • Mergibacter septicus (isolates:6; rSTs:4 tree)
        • Mesocricetibacter (isolates:1; rSTs:1)
          • Mesocricetibacter intestinalis (isolates:1; rSTs:1)
        • Muribacter (isolates:4; rSTs:2)
          • Muribacter muris (isolates:4; rSTs:2)
        • Necropsobacter (isolates:3; rSTs:2)
          • Necropsobacter massiliensis (isolates:2; rSTs:1)
          • Necropsobacter rosorum (isolates:1; rSTs:1)
        • Nicoletella (isolates:2; rSTs:1)
          • Nicoletella semolina (isolates:2; rSTs:1)
        • Otariodibacter (isolates:2; rSTs:1)
          • Otariodibacter oris (isolates:2; rSTs:1)
        • Pasteurella (isolates:1237; rSTs:513 tree)
          • Pasteurella atlantica (isolates:75; rSTs:7 tree)
          • Pasteurella bettyae (isolates:2; rSTs:1)
          • Pasteurella canis (isolates:9; rSTs:9 tree)
          • Pasteurella dagmatis (isolates:2; rSTs:1)
          • Pasteurella langaaensis (isolates:1; rSTs:1)
          • Pasteurella multocida (isolates:1129; rSTs:486 tree)
          • Pasteurella oralis (isolates:1; rSTs:1)
          • Pasteurella skyensis (isolates:14; rSTs:6 tree)
          • Pasteurella sp. (isolates:1)
          • Pasteurella testudinis (isolates:3; rSTs:1)
        • Phocoenobacter (isolates:2; rSTs:1)
          • Phocoenobacter uteri (isolates:2; rSTs:1)
        • Rodentibacter (isolates:48; rSTs:33 tree)
          • Rodentibacter caecimuris (isolates:12; rSTs:8 tree)
          • Rodentibacter genomosp. 1 (isolates:1; rSTs:1)
          • Rodentibacter genomosp. 2 (isolates:1; rSTs:1)
          • Rodentibacter haemolyticus (isolates:1; rSTs:1)
          • Rodentibacter heidelbergensis (isolates:1; rSTs:1)
          • Rodentibacter mrazii (isolates:1; rSTs:1)
          • Rodentibacter myodis (isolates:1; rSTs:1)
          • Rodentibacter pneumotropicus (isolates:19; rSTs:8 tree)
          • Rodentibacter rarus (isolates:2; rSTs:2)
          • Rodentibacter ratti (isolates:4; rSTs:4 tree)
          • Rodentibacter sp. (isolates:2; rSTs:3 tree)
          • Rodentibacter trehalosifermentans (isolates:3; rSTs:2)
        • Spirabiliibacterium (isolates:3; rSTs:3 tree)
          • Spirabiliibacterium falconis (isolates:1; rSTs:1)
          • Spirabiliibacterium mucosae (isolates:1; rSTs:1)
          • Spirabiliibacterium pneumoniae (isolates:1; rSTs:1)
        • Testudinibacter (isolates:9; rSTs:3 tree)
          • Testudinibacter aquarius (isolates:3; rSTs:1)
          • Testudinibacter sp. (isolates:6; rSTs:2)
        • Ursidibacter (isolates:15; rSTs:3 tree)
          • Ursidibacter arcticus (isolates:1; rSTs:1)
          • Ursidibacter maritimus (isolates:14; rSTs:2)
        • Vespertiliibacter (isolates:2; rSTs:1)
          • Vespertiliibacter pulmonis (isolates:2; rSTs:1)
        • Volucribacter (isolates:2; rSTs:2)
          • Volucribacter amazonae (isolates:1; rSTs:1)
          • Volucribacter psittacicida (isolates:1; rSTs:1)
      • Psittacicellaceae (isolates:3; rSTs:2)
        • Psittacicella (isolates:3; rSTs:2)
          • Psittacicella gerlachiana (isolates:1)
          • Psittacicella hinzii (isolates:1; rSTs:1)
          • Psittacicella melopsittaci (isolates:1; rSTs:1)
    • Pseudomonadales (isolates:30249; rSTs:8455)
      • Ketobacteraceae (isolates:1; rSTs:1)
        • Ketobacter (isolates:1; rSTs:1)
          • Ketobacter alkanivorans (isolates:1; rSTs:1)
      • Marinobacteraceae (isolates:223; rSTs:192 tree)
        • Mangrovitalea (isolates:1; rSTs:1)
          • Mangrovitalea sediminis (isolates:1; rSTs:1)
        • Marinobacter (isolates:220; rSTs:189 tree)
          • Marinobacter adhaerens (isolates:1; rSTs:1)
          • Marinobacter albus (isolates:1; rSTs:1)
          • Marinobacter alexandrii (isolates:2; rSTs:2)
          • Marinobacter algicola (isolates:1; rSTs:1)
          • Marinobacter antarcticus (isolates:1; rSTs:1)
          • Marinobacter arenosus (isolates:1; rSTs:1)
          • Marinobacter aromaticivorans (isolates:1; rSTs:1)
          • Marinobacter azerbaijanicus (isolates:1; rSTs:1)
          • Marinobacter bohaiensis (isolates:1; rSTs:1)
          • Marinobacter bryozoorum (isolates:1; rSTs:1)
          • Marinobacter caseinilyticus (isolates:1; rSTs:1)
          • Marinobacter changyiensis (isolates:1; rSTs:1)
          • Marinobacter confluentis (isolates:2; rSTs:1)
          • Marinobacter daepoensis (isolates:4; rSTs:3 tree)
          • Marinobacter daqiaonensis (isolates:2; rSTs:1)
          • Marinobacter denitrificans (isolates:1; rSTs:1)
          • Marinobacter excellens (isolates:2; rSTs:1)
          • Marinobacter flavimaris (isolates:2; rSTs:1)
          • Marinobacter fonticola (isolates:1; rSTs:1)
          • Marinobacter fuscus (isolates:1; rSTs:1)
          • Marinobacter gelidimuriae (isolates:1; rSTs:1)
          • Marinobacter goseongensis (isolates:1; rSTs:1)
          • Marinobacter gudaonensis (isolates:1; rSTs:1)
          • Marinobacter guineae (isolates:1; rSTs:1)
          • Marinobacter halodurans (isolates:1; rSTs:1)
          • Marinobacter halophilus (isolates:2; rSTs:2)
          • Marinobacter halotolerans (isolates:1; rSTs:1)
          • Marinobacter iranensis (isolates:1; rSTs:1)
          • Marinobacter koreensis (isolates:1; rSTs:1)
          • Marinobacter lipolyticus (isolates:1; rSTs:1)
          • Marinobacter litoralis (isolates:2; rSTs:2)
          • Marinobacter lutaoensis (isolates:2; rSTs:2)
          • Marinobacter manganoxydans (isolates:1; rSTs:1)
          • Marinobacter mangrovi (isolates:1; rSTs:1)
          • Marinobacter maritimus (isolates:1; rSTs:1)
          • Marinobacter maroccanus (isolates:1; rSTs:1)
          • Marinobacter mobilis (isolates:1; rSTs:1)
          • Marinobacter nanhaiticus (isolates:2; rSTs:1)
          • Marinobacter nauticus (isolates:24; rSTs:18 tree)
          • Marinobacter nitratireducens (isolates:1; rSTs:1)
          • Marinobacter orientalis (isolates:2; rSTs:1)
          • Marinobacter oulmenensis (isolates:1; rSTs:1)
          • Marinobacter panjinensis (isolates:2; rSTs:1)
          • Marinobacter pelagius (isolates:1; rSTs:2 tree)
          • Marinobacter persicus (isolates:5; rSTs:2)
          • Marinobacter piscensis (isolates:1; rSTs:1)
          • Marinobacter profundi (isolates:1; rSTs:1)
          • Marinobacter psychrophilus (isolates:1; rSTs:1)
          • Marinobacter qingdaonensis (isolates:1; rSTs:1)
          • Marinobacter salarius (isolates:14; rSTs:13 tree)
          • Marinobacter salexigens (isolates:1; rSTs:1)
          • Marinobacter salicampi (isolates:1; rSTs:1)
          • Marinobacter salinexigens (isolates:1; rSTs:1)
          • Marinobacter salinisoli (isolates:1; rSTs:1)
          • Marinobacter salinus (isolates:1; rSTs:1)
          • Marinobacter salsuginis (isolates:1; rSTs:1)
          • Marinobacter santoriniensis (isolates:1; rSTs:1)
          • Marinobacter sediminicola (isolates:1; rSTs:1)
          • Marinobacter sediminum (isolates:1; rSTs:1)
          • Marinobacter segnicrescens (isolates:1; rSTs:1)
          • Marinobacter shengliensis (isolates:4; rSTs:4 tree)
          • Marinobacter similis (isolates:1; rSTs:1)
          • Marinobacter sp. (isolates:90; rSTs:77 tree)
          • Marinobacter suadae (isolates:1; rSTs:1)
          • Marinobacter subterrani (isolates:1; rSTs:1)
          • Marinobacter szutsaonensis (isolates:1; rSTs:1)
          • Marinobacter vinifirmus (isolates:1; rSTs:1)
          • Marinobacter vulgaris (isolates:1; rSTs:1)
          • Marinobacter xestospongiae (isolates:3; rSTs:2)
          • Marinobacter xiaoshiensis (isolates:1; rSTs:1)
          • Marinobacter zhanjiangensis (isolates:1; rSTs:1)
          • Marinobacter zhejiangensis (isolates:1; rSTs:1)
        • Tamilnaduibacter (isolates:2; rSTs:2)
          • Tamilnaduibacter salinus (isolates:2; rSTs:2)
      • Perlucidibacaceae (isolates:3; rSTs:3 tree)
        • Perlucidibaca (isolates:3; rSTs:3 tree)
          • Perlucidibaca aquatica (isolates:1; rSTs:1)
          • Perlucidibaca piscinae (isolates:2; rSTs:2)
      • Pseudohongiellaceae (isolates:7; rSTs:5 tree)
        • Pseudohongiella (isolates:7; rSTs:5 tree)
          • Pseudohongiella acticola (isolates:1; rSTs:1)
          • Pseudohongiella nitratireducens (isolates:3; rSTs:1)
          • Pseudohongiella sp. (isolates:2; rSTs:2)
          • Pseudohongiella spirulinae (isolates:1; rSTs:1)
      • Pseudomonadaceae (isolates:30014; rSTs:8253)
        • Atopomonas (isolates:3; rSTs:3 tree)
          • Atopomonas hussainii (isolates:2; rSTs:2)
          • Atopomonas sediminilitoris (isolates:1; rSTs:1)
        • Azomonas (isolates:2; rSTs:2)
          • Azomonas agilis (isolates:1; rSTs:1)
          • Azomonas macrocytogenes (isolates:1; rSTs:1)
        • Azotobacter (isolates:30; rSTs:20 tree)
          • Azotobacter beijerinckii (isolates:6; rSTs:4 tree)
          • Azotobacter chroococcum (isolates:10; rSTs:9 tree)
          • Azotobacter salinestris (isolates:3; rSTs:3 tree)
          • Azotobacter sp. (isolates:1)
          • Azotobacter vinelandii (isolates:10; rSTs:4 tree)
        • Denitrificimonas (isolates:3; rSTs:3 tree)
          • Denitrificimonas caeni (isolates:2; rSTs:2)
          • Denitrificimonas halotolerans (isolates:1; rSTs:1)
        • Entomomonas (isolates:3; rSTs:3 tree)
          • Entomomonas asaccharolytica (isolates:1; rSTs:1)
          • Entomomonas moraniae (isolates:1; rSTs:1)
          • Entomomonas sp. (isolates:1; rSTs:1)
        • Halopseudomonas (isolates:34; rSTs:29 tree)
          • Halopseudomonas aestusnigri (isolates:7; rSTs:6 tree)
          • Halopseudomonas bauzanensis (isolates:3; rSTs:2)
          • Halopseudomonas formosensis (isolates:2; rSTs:2)
          • Halopseudomonas gallaeciensis (isolates:1; rSTs:1)
          • Halopseudomonas laoshanensis (isolates:1; rSTs:1)
          • Halopseudomonas litoralis (isolates:1; rSTs:1)
          • Halopseudomonas maritima (isolates:1; rSTs:1)
          • Halopseudomonas nanhaiensis (isolates:1; rSTs:1)
          • Halopseudomonas oceani (isolates:2; rSTs:2)
          • Halopseudomonas pachastrellae (isolates:2; rSTs:1)
          • Halopseudomonas pelagia (isolates:1; rSTs:1)
          • Halopseudomonas pertucinogena (isolates:1; rSTs:1)
          • Halopseudomonas phragmitis (isolates:1; rSTs:1)
          • Halopseudomonas sabulinigri (isolates:2; rSTs:2)
          • Halopseudomonas salegens (isolates:1; rSTs:1)
          • Halopseudomonas salina (isolates:2; rSTs:1)
          • Halopseudomonas sp. (isolates:2; rSTs:1 tree)
          • Halopseudomonas xiamenensis (isolates:1; rSTs:1)
          • Halopseudomonas xinjiangensis (isolates:1; rSTs:1)
          • Halopseudomonas yangmingensis (isolates:1; rSTs:1)
        • Permianibacter (isolates:3; rSTs:3 tree)
          • Permianibacter aggregans (isolates:2; rSTs:2)
          • Permianibacter fluminis (isolates:1; rSTs:1)
        • Pseudomonas (isolates:29725; rSTs:8014)
          • Candidatus Pseudomonas adelgestsugas (isolates:1; rSTs:1)
          • Pseudomonas abietaniphila (isolates:4; rSTs:3 tree)
          • Pseudomonas abyssi (isolates:1; rSTs:1)
          • Pseudomonas aegrilactucae (isolates:1; rSTs:1)
          • Pseudomonas aeruginosa (isolates:23232; rSTs:4296)
          • Pseudomonas aestuarii (isolates:1; rSTs:1)
          • Pseudomonas agarici (isolates:5; rSTs:3 tree)
          • Pseudomonas agronomica (isolates:1; rSTs:1)
          • Pseudomonas akapageensis (isolates:1; rSTs:1)
          • Pseudomonas alcaligenes (isolates:18; rSTs:9 tree)
          • Pseudomonas alcaliphila (isolates:4; rSTs:2)
          • Pseudomonas alkylphenolica (isolates:5; rSTs:5 tree)
          • Pseudomonas allii (isolates:3; rSTs:2)
          • Pseudomonas alliivorans (isolates:5; rSTs:5 tree)
          • Pseudomonas allokribbensis (isolates:1; rSTs:1)
          • Pseudomonas alloputida (isolates:16; rSTs:5 tree)
          • Pseudomonas alvandae (isolates:6; rSTs:5 tree)
          • Pseudomonas amygdali (isolates:21; rSTs:5 tree)
          • Pseudomonas anatoliensis (isolates:1; rSTs:1)
          • Pseudomonas anguilliseptica (isolates:3; rSTs:3 tree)
          • Pseudomonas antarctica (isolates:3; rSTs:1)
          • Pseudomonas anuradhapurensis (isolates:1; rSTs:1)
          • Pseudomonas aphyarum (isolates:3; rSTs:2)
          • Pseudomonas arcuscaelestis (isolates:3; rSTs:3 tree)
          • Pseudomonas argentinensis (isolates:3; rSTs:2)
          • Pseudomonas aromaticivorans (isolates:1; rSTs:1)
          • Pseudomonas arsenicoxydans (isolates:2; rSTs:2)
          • Pseudomonas asgharzadehiana (isolates:1; rSTs:1)
          • Pseudomonas asiatica (isolates:14; rSTs:4 tree)
          • Pseudomonas asplenii (isolates:1; rSTs:1)
          • Pseudomonas asturiensis (isolates:1; rSTs:1)
          • Pseudomonas asuensis (isolates:1; rSTs:1)
          • Pseudomonas atacamensis (isolates:8; rSTs:8 tree)
          • Pseudomonas atagonensis (isolates:1; rSTs:1)
          • Pseudomonas avellanae (isolates:10; rSTs:4 tree)
          • Pseudomonas aylmerensis (isolates:2; rSTs:1)
          • Pseudomonas azadiae (isolates:1; rSTs:1)
          • Pseudomonas azerbaijanoccidentalis (isolates:2; rSTs:2)
          • Pseudomonas azerbaijanorientalis (isolates:1; rSTs:1)
          • Pseudomonas azotoformans (isolates:5; rSTs:1)
          • Pseudomonas baetica (isolates:4; rSTs:3 tree)
          • Pseudomonas baltica (isolates:1; rSTs:1)
          • Pseudomonas bananamidigenes (isolates:1; rSTs:1)
          • Pseudomonas batumici (isolates:3; rSTs:3 tree)
          • Pseudomonas benzenivorans (isolates:1; rSTs:1)
          • Pseudomonas benzopyrenica (isolates:2; rSTs:2)
          • Pseudomonas berkeleyensis (isolates:2; rSTs:1)
          • Pseudomonas bijieensis (isolates:3; rSTs:3 tree)
          • Pseudomonas boanensis (isolates:1; rSTs:1)
          • Pseudomonas bohemica (isolates:1; rSTs:1)
          • Pseudomonas borbori (isolates:1; rSTs:1)
          • Pseudomonas botevensis (isolates:1; rSTs:1)
          • Pseudomonas brassicacearum (isolates:23; rSTs:17 tree)
          • Pseudomonas brassicae (isolates:2; rSTs:1)
          • Pseudomonas brenneri (isolates:6; rSTs:3 tree)
          • Pseudomonas bubulae (isolates:10; rSTs:9 tree)
          • Pseudomonas californiensis (isolates:2; rSTs:1)
          • Pseudomonas campi (isolates:1; rSTs:1)
          • Pseudomonas canadensis (isolates:10; rSTs:10 tree)
          • Pseudomonas cannabina (isolates:11; rSTs:5 tree)
          • Pseudomonas capeferrum (isolates:4; rSTs:3 tree)
          • Pseudomonas capsici (isolates:12; rSTs:6 tree)
          • Pseudomonas carbonaria (isolates:1; rSTs:1)
          • Pseudomonas caricapapayae (isolates:5; rSTs:3 tree)
          • Pseudomonas carnis (isolates:35; rSTs:21 tree)
          • Pseudomonas caspiana (isolates:2; rSTs:2)
          • Pseudomonas cavernae (isolates:1; rSTs:1)
          • Pseudomonas cavernicola (isolates:1; rSTs:1)
          • Pseudomonas cedrina (isolates:4; rSTs:2)
          • Pseudomonas cerasi (isolates:4; rSTs:3 tree)
          • Pseudomonas ceruminis (isolates:2; rSTs:1)
          • Pseudomonas chaetocerotis (isolates:1; rSTs:1)
          • Pseudomonas chengduensis (isolates:22; rSTs:19 tree)
          • Pseudomonas chlororaphis (isolates:139; rSTs:77 tree)
          • Pseudomonas cichorii (isolates:14; rSTs:12 tree)
          • Pseudomonas citri (isolates:1; rSTs:1)
          • Pseudomonas citronellolis (isolates:16; rSTs:8 tree)
          • Pseudomonas coleopterorum (isolates:7; rSTs:6 tree)
          • Pseudomonas composti (isolates:3; rSTs:3 tree)
          • Pseudomonas congelans (isolates:11; rSTs:11 tree)
          • Pseudomonas coronafaciens (isolates:60; rSTs:21 tree)
          • Pseudomonas corrugata (isolates:16; rSTs:13 tree)
          • Pseudomonas costantinii (isolates:4; rSTs:3 tree)
          • Pseudomonas cremoricolorata (isolates:2; rSTs:2)
          • Pseudomonas cremoris (isolates:2; rSTs:1)
          • Pseudomonas crudilactis (isolates:1; rSTs:1)
          • Pseudomonas cuatrocienegasensis (isolates:1; rSTs:1)
          • Pseudomonas cucumis (isolates:2; rSTs:2)
          • Pseudomonas cyclaminis (isolates:2; rSTs:1)
          • Pseudomonas daroniae (isolates:3; rSTs:2)
          • Pseudomonas deceptionensis (isolates:2; rSTs:1)
          • Pseudomonas defluvii (isolates:1; rSTs:1)
          • Pseudomonas delhiensis (isolates:3; rSTs:2)
          • Pseudomonas donghuensis (isolates:9; rSTs:7 tree)
          • Pseudomonas dryadis (isolates:2; rSTs:2)
          • Pseudomonas duriflava (isolates:1; rSTs:1)
          • Pseudomonas edaphica (isolates:5; rSTs:3 tree)
          • Pseudomonas ekonensis (isolates:1; rSTs:1)
          • Pseudomonas emilianonis (isolates:1; rSTs:1)
          • Pseudomonas endophytica (isolates:1; rSTs:1)
          • Pseudomonas entomophila (isolates:6; rSTs:5 tree)
          • Pseudomonas eucalypticola (isolates:1; rSTs:1)
          • Pseudomonas extremaustralis (isolates:10; rSTs:7 tree)
          • Pseudomonas extremorientalis (isolates:6; rSTs:3 tree)
          • Pseudomonas fakonensis (isolates:1; rSTs:1)
          • Pseudomonas farris (isolates:1; rSTs:1)
          • Pseudomonas farsensis (isolates:2; rSTs:2)
          • Pseudomonas faucium (isolates:3; rSTs:2)
          • Pseudomonas ficuserectae (isolates:4; rSTs:3 tree)
          • Pseudomonas fildesensis (isolates:1; rSTs:1)
          • Pseudomonas fitomaticsae (isolates:1; rSTs:1)
          • Pseudomonas flavescens (isolates:2; rSTs:2)
          • Pseudomonas flavocrustae (isolates:1; rSTs:1)
          • Pseudomonas flexibilis (isolates:5; rSTs:4 tree)
          • Pseudomonas floridensis (isolates:1; rSTs:1)
          • Pseudomonas fluorescens (isolates:15; rSTs:7 tree)
          • Pseudomonas fluvialis (isolates:2; rSTs:1)
          • Pseudomonas folii (isolates:1; rSTs:1)
          • Pseudomonas fontis (isolates:2; rSTs:1)
          • Pseudomonas fortuita (isolates:1; rSTs:1)
          • Pseudomonas fragi (isolates:31; rSTs:21 tree)
          • Pseudomonas frederiksbergensis (isolates:2; rSTs:2)
          • Pseudomonas fulva (isolates:87; rSTs:30 tree)
          • Pseudomonas furukawaii (isolates:3; rSTs:2)
          • Pseudomonas fuscovaginae (isolates:7; rSTs:2)
          • Pseudomonas germanica (isolates:2; rSTs:2)
          • Pseudomonas gessardii (isolates:13; rSTs:7 tree)
          • Pseudomonas gingeri (isolates:24; rSTs:11 tree)
          • Pseudomonas glycinae (isolates:7; rSTs:6 tree)
          • Pseudomonas gozinkensis (isolates:1; rSTs:1)
          • Pseudomonas graminis (isolates:2; rSTs:2 tree)
          • Pseudomonas granadensis (isolates:8; rSTs:4 tree)
          • Pseudomonas grandcourensis (isolates:1; rSTs:1)
          • Pseudomonas gregormendelii (isolates:1; rSTs:1)
          • Pseudomonas grimontii (isolates:3; rSTs:3 tree)
          • Pseudomonas guangdongensis (isolates:1; rSTs:1)
          • Pseudomonas guariconensis (isolates:26; rSTs:17 tree)
          • Pseudomonas guguanensis (isolates:5; rSTs:4 tree)
          • Pseudomonas guineae (isolates:1; rSTs:1)
          • Pseudomonas guryensis (isolates:1; rSTs:1)
          • Pseudomonas haemolytica (isolates:6; rSTs:2)
          • Pseudomonas hamedanensis (isolates:1; rSTs:1)
          • Pseudomonas hefeiensis (isolates:3; rSTs:1)
          • Pseudomonas helleri (isolates:14; rSTs:12 tree)
          • Pseudomonas helmanticensis (isolates:1; rSTs:1)
          • Pseudomonas helvetica (isolates:1; rSTs:1)
          • Pseudomonas hormoni (isolates:1; rSTs:1)
          • Pseudomonas huaxiensis (isolates:1; rSTs:1)
          • Pseudomonas humi (isolates:1; rSTs:1)
          • Pseudomonas hunanensis (isolates:3; rSTs:2)
          • Pseudomonas hydrolytica (isolates:2; rSTs:2)
          • Pseudomonas hygromyciniae (isolates:2; rSTs:2)
          • Pseudomonas idahonensis (isolates:3; rSTs:3 tree)
          • Pseudomonas indica (isolates:3; rSTs:2)
          • Pseudomonas indoloxydans (isolates:1; rSTs:1)
          • Pseudomonas inefficax (isolates:5; rSTs:4 tree)
          • Pseudomonas insulae (isolates:1; rSTs:1)
          • Pseudomonas iranensis (isolates:1; rSTs:1)
          • Pseudomonas iridis (isolates:2; rSTs:2)
          • Pseudomonas izuensis (isolates:2; rSTs:2)
          • Pseudomonas japonica (isolates:2; rSTs:1)
          • Pseudomonas jessenii (isolates:4; rSTs:3 tree)
          • Pseudomonas jilinensis (isolates:1; rSTs:1)
          • Pseudomonas jinjuensis (isolates:2; rSTs:1)
          • Pseudomonas juntendi (isolates:52; rSTs:32 tree)
          • Pseudomonas kairouanensis (isolates:1; rSTs:1)
          • Pseudomonas karstica (isolates:1; rSTs:1)
          • Pseudomonas kermanshahensis (isolates:4; rSTs:4 tree)
          • Pseudomonas khavaziana (isolates:2; rSTs:2)
          • Pseudomonas khazarica (isolates:3; rSTs:3 tree)
          • Pseudomonas khorasanensis (isolates:1; rSTs:1)
          • Pseudomonas kielensis (isolates:3; rSTs:3 tree)
          • Pseudomonas kilonensis (isolates:3; rSTs:3 tree)
          • Pseudomonas kitaguniensis (isolates:2; rSTs:2)
          • Pseudomonas knackmussii (isolates:2; rSTs:2)
          • Pseudomonas koreensis (isolates:8; rSTs:5 tree)
          • Pseudomonas kribbensis (isolates:2; rSTs:2)
          • Pseudomonas kulmbachensis (isolates:2; rSTs:2)
          • Pseudomonas kurunegalensis (isolates:13; rSTs:6 tree)
          • Pseudomonas kuykendallii (isolates:2; rSTs:1)
          • Pseudomonas lactis (isolates:27; rSTs:14 tree)
          • Pseudomonas lactucae (isolates:3; rSTs:2)
          • Pseudomonas lalkuanensis (isolates:2; rSTs:2)
          • Pseudomonas lalucatii (isolates:1; rSTs:1)
          • Pseudomonas laurentiana (isolates:2; rSTs:2)
          • Pseudomonas laurylsulfatiphila (isolates:2; rSTs:2)
          • Pseudomonas laurylsulfativorans (isolates:2; rSTs:2)
          • Pseudomonas leptonychotis (isolates:1; rSTs:1)
          • Pseudomonas libanensis (isolates:2; rSTs:1)
          • Pseudomonas lijiangensis (isolates:4; rSTs:2)
          • Pseudomonas lini (isolates:6; rSTs:4 tree)
          • Pseudomonas linyingensis (isolates:1; rSTs:1)
          • Pseudomonas lopnurensis (isolates:1; rSTs:1)
          • Pseudomonas lundensis (isolates:40; rSTs:30 tree)
          • Pseudomonas lurida (isolates:23; rSTs:14 tree)
          • Pseudomonas lutea (isolates:1; rSTs:1)
          • Pseudomonas luteola (isolates:7; rSTs:4 tree)
          • Pseudomonas maioricensis (isolates:1; rSTs:1)
          • Pseudomonas mandelii (isolates:9; rSTs:7 tree)
          • Pseudomonas mangiferae (isolates:1; rSTs:1)
          • Pseudomonas mangrovi (isolates:1; rSTs:1)
          • Pseudomonas marginalis (isolates:8; rSTs:4 tree)
          • Pseudomonas marianensis (isolates:1; rSTs:1)
          • Pseudomonas marincola (isolates:3; rSTs:3 tree)
          • Pseudomonas marvdashtae (isolates:1; rSTs:1)
          • Pseudomonas massiliensis (isolates:2; rSTs:1)
          • Pseudomonas matsuisoli (isolates:1; rSTs:1)
          • Pseudomonas maumuensis (isolates:1; rSTs:1)
          • Pseudomonas mediterranea (isolates:11; rSTs:7 tree)
          • Pseudomonas meliae (isolates:2; rSTs:2)
          • Pseudomonas mendocina (isolates:14; rSTs:11 tree)
          • Pseudomonas mercuritolerans (isolates:1; rSTs:1)
          • Pseudomonas migulae (isolates:2; rSTs:1)
          • Pseudomonas mohnii (isolates:2; rSTs:1)
          • Pseudomonas monsensis (isolates:4; rSTs:3 tree)
          • Pseudomonas monteilii (isolates:33; rSTs:18 tree)
          • Pseudomonas moorei (isolates:4; rSTs:3 tree)
          • Pseudomonas moraviensis (isolates:3; rSTs:3 tree)
          • Pseudomonas morbosilactucae (isolates:2; rSTs:2)
          • Pseudomonas mosselii (isolates:46; rSTs:30 tree)
          • Pseudomonas mucidolens (isolates:5; rSTs:4 tree)
          • Pseudomonas mucoides (isolates:1; rSTs:1)
          • Pseudomonas multiresinivorans (isolates:1; rSTs:1)
          • Pseudomonas muyukensis (isolates:1; rSTs:1)
          • Pseudomonas nabeulensis (isolates:1; rSTs:1)
          • Pseudomonas neuropathica (isolates:1; rSTs:1)
          • Pseudomonas neustonica (isolates:1; rSTs:1)
          • Pseudomonas nicosulfuronedens (isolates:4; rSTs:1)
          • Pseudomonas nitritireducens (isolates:1; rSTs:1)
          • Pseudomonas nitroreducens (isolates:10; rSTs:6 tree)
          • Pseudomonas nunensis (isolates:4; rSTs:2)
          • Pseudomonas ogarae (isolates:9; rSTs:3 tree)
          • Pseudomonas oleovorans (isolates:20; rSTs:10 tree)
          • Pseudomonas oligotrophica (isolates:1; rSTs:1)
          • Pseudomonas orientalis (isolates:15; rSTs:13 tree)
          • Pseudomonas oryzae (isolates:1; rSTs:1)
          • Pseudomonas oryzagri (isolates:1; rSTs:1)
          • Pseudomonas oryzicola (isolates:1; rSTs:1)
          • Pseudomonas oryzihabitans (isolates:22; rSTs:15 tree)
          • Pseudomonas oryziphila (isolates:2; rSTs:2)
          • Pseudomonas otitidis (isolates:37; rSTs:29 tree)
          • Pseudomonas ovata (isolates:1; rSTs:1)
          • Pseudomonas palleroniana (isolates:8; rSTs:6 tree)
          • Pseudomonas palmensis (isolates:1; rSTs:1)
          • Pseudomonas panipatensis (isolates:2; rSTs:1)
          • Pseudomonas paracarnis (isolates:14; rSTs:8 tree)
          • Pseudomonas paraeruginosa (isolates:30; rSTs:15 tree)
          • Pseudomonas parafulva (isolates:2; rSTs:1)
          • Pseudomonas paraglycinae (isolates:1; rSTs:1)
          • Pseudomonas parakoreensis (isolates:1; rSTs:1)
          • Pseudomonas paralactis (isolates:3; rSTs:3 tree)
          • Pseudomonas paralcaligenes (isolates:1; rSTs:1)
          • Pseudomonas parasichuanensis (isolates:1; rSTs:1)
          • Pseudomonas paraveronii (isolates:2; rSTs:2)
          • Pseudomonas paraversuta (isolates:3; rSTs:2)
          • Pseudomonas peli (isolates:4; rSTs:3 tree)
          • Pseudomonas peradeniyensis (isolates:3; rSTs:3 tree)
          • Pseudomonas pergaminensis (isolates:1; rSTs:1)
          • Pseudomonas petrae (isolates:4; rSTs:4 tree)
          • Pseudomonas petroselini (isolates:4; rSTs:1)
          • Pseudomonas pharmacofabricae (isolates:1; rSTs:1)
          • Pseudomonas pharyngis (isolates:1; rSTs:1)
          • Pseudomonas pisciculturae (isolates:1; rSTs:1)
          • Pseudomonas piscis (isolates:4; rSTs:3 tree)
          • Pseudomonas plecoglossicida (isolates:7; rSTs:3 tree)
          • Pseudomonas poae (isolates:30; rSTs:10 tree)
          • Pseudomonas pohangensis (isolates:1; rSTs:1)
          • Pseudomonas profundi (isolates:1; rSTs:1)
          • Pseudomonas promysalinigenes (isolates:2; rSTs:2)
          • Pseudomonas prosekii (isolates:6; rSTs:5 tree)
          • Pseudomonas protegens (isolates:70; rSTs:39 tree)
          • Pseudomonas proteolytica (isolates:20; rSTs:16 tree)
          • Pseudomonas pseudonitroreducens (isolates:3; rSTs:2)
          • Pseudomonas psychrophila (isolates:8; rSTs:5 tree)
          • Pseudomonas punonensis (isolates:1; rSTs:1)
          • Pseudomonas purpurea (isolates:1; rSTs:1)
          • Pseudomonas putida (isolates:68; rSTs:37 tree)
          • Pseudomonas qingdaonensis (isolates:8; rSTs:8 tree)
          • Pseudomonas quasicaspiana (isolates:3; rSTs:3 tree)
          • Pseudomonas quebecensis (isolates:4; rSTs:1)
          • Pseudomonas quercus (isolates:1; rSTs:1)
          • Pseudomonas reactans (isolates:5; rSTs:4 tree)
          • Pseudomonas reidholzensis (isolates:1; rSTs:1)
          • Pseudomonas reinekei (isolates:3; rSTs:1)
          • Pseudomonas resinovorans (isolates:2; rSTs:2)
          • Pseudomonas rhizophila (isolates:2; rSTs:2)
          • Pseudomonas rhizoryzae (isolates:2; rSTs:1)
          • Pseudomonas rhizosphaerae (isolates:2; rSTs:2)
          • Pseudomonas rhodesiae (isolates:23; rSTs:18 tree)
          • Pseudomonas rubra (isolates:3; rSTs:1)
          • Pseudomonas rustica (isolates:2; rSTs:2)
          • Pseudomonas sagittaria (isolates:1; rSTs:1)
          • Pseudomonas saliphila (isolates:1; rSTs:1)
          • Pseudomonas salmasensis (isolates:3; rSTs:3 tree)
          • Pseudomonas salomonii (isolates:5; rSTs:4 tree)
          • Pseudomonas saponiphila (isolates:2; rSTs:2)
          • Pseudomonas saudimassiliensis (isolates:1; rSTs:1)
          • Pseudomonas saudiphocaensis (isolates:3; rSTs:3 tree)
          • Pseudomonas savastanoi (isolates:32; rSTs:19 tree)
          • Pseudomonas saxonica (isolates:3; rSTs:3 tree)
          • Pseudomonas schmalbachii (isolates:1; rSTs:1)
          • Pseudomonas sediminis (isolates:4; rSTs:4 tree)
          • Pseudomonas segetis (isolates:1; rSTs:1)
          • Pseudomonas seleniipraecipitans (isolates:2; rSTs:2)
          • Pseudomonas serbica (isolates:1; rSTs:1)
          • Pseudomonas serboccidentalis (isolates:1; rSTs:1)
          • Pseudomonas sessilinigenes (isolates:2; rSTs:1)
          • Pseudomonas shahriarae (isolates:8; rSTs:7 tree)
          • Pseudomonas shirazensis (isolates:2; rSTs:1)
          • Pseudomonas shirazica (isolates:7; rSTs:5 tree)
          • Pseudomonas sichuanensis (isolates:5; rSTs:2)
          • Pseudomonas sihuiensis (isolates:1; rSTs:1)
          • Pseudomonas silesiensis (isolates:3; rSTs:3 tree)
          • Pseudomonas siliginis (isolates:11; rSTs:10 tree)
          • Pseudomonas silvicola (isolates:1; rSTs:1)
          • Pseudomonas simiae (isolates:27; rSTs:18 tree)
          • Pseudomonas sivasensis (isolates:6; rSTs:5 tree)
          • Pseudomonas solani (isolates:2; rSTs:2)
          • Pseudomonas soli (isolates:12; rSTs:10 tree)
          • Pseudomonas songnenensis (isolates:3; rSTs:2)
          • Pseudomonas sp. (isolates:2249; rSTs:1892)
          • Pseudomonas spelaei (isolates:1; rSTs:1)
          • Pseudomonas sputi (isolates:1; rSTs:1)
          • Pseudomonas straminea (isolates:2; rSTs:2)
          • Pseudomonas subflava (isolates:1; rSTs:1)
          • Pseudomonas synxantha (isolates:14; rSTs:8 tree)
          • Pseudomonas syringae (isolates:569; rSTs:219 tree)
          • Pseudomonas taeanensis (isolates:1; rSTs:1)
          • Pseudomonas taetrolens (isolates:5; rSTs:3 tree)
          • Pseudomonas taiwanensis (isolates:4; rSTs:4 tree)
          • Pseudomonas tehranensis (isolates:1; rSTs:1)
          • Pseudomonas tensinigenes (isolates:1; rSTs:1)
          • Pseudomonas thermotolerans (isolates:2; rSTs:2)
          • Pseudomonas thivervalensis (isolates:4; rSTs:2)
          • Pseudomonas tohonis (isolates:9; rSTs:7 tree)
          • Pseudomonas tolaasii (isolates:20; rSTs:11 tree)
          • Pseudomonas toyotomiensis (isolates:5; rSTs:4 tree)
          • Pseudomonas tremae (isolates:6; rSTs:5 tree)
          • Pseudomonas triclosanedens (isolates:4; rSTs:1)
          • Pseudomonas tritici (isolates:1; rSTs:1)
          • Pseudomonas triticicola (isolates:1; rSTs:1)
          • Pseudomonas triticifolii (isolates:1; rSTs:1)
          • Pseudomonas trivialis (isolates:28; rSTs:17 tree)
          • Pseudomonas tructae (isolates:1; rSTs:1)
          • Pseudomonas tumuqii (isolates:1; rSTs:1)
          • Pseudomonas turukhanskensis (isolates:1; rSTs:1)
          • Pseudomonas typographi (isolates:3; rSTs:3 tree)
          • Pseudomonas ullengensis (isolates:1; rSTs:1)
          • Pseudomonas umsongensis (isolates:6; rSTs:5 tree)
          • Pseudomonas urethralis (isolates:2; rSTs:1)
          • Pseudomonas urmiensis (isolates:1; rSTs:1)
          • Pseudomonas uvaldensis (isolates:1; rSTs:1)
          • Pseudomonas vancouverensis (isolates:3; rSTs:1)
          • Pseudomonas vanderleydeniana (isolates:1; rSTs:1)
          • Pseudomonas veronii (isolates:27; rSTs:24 tree)
          • Pseudomonas versuta (isolates:3; rSTs:2)
          • Pseudomonas viciae (isolates:3; rSTs:3 tree)
          • Pseudomonas violetae (isolates:1; rSTs:1)
          • Pseudomonas viridiflava (isolates:1421; rSTs:123 tree)
          • Pseudomonas vlassakiae (isolates:2; rSTs:2)
          • Pseudomonas vranovensis (isolates:2; rSTs:2)
          • Pseudomonas wadenswilerensis (isolates:3; rSTs:3 tree)
          • Pseudomonas weihenstephanensis (isolates:4; rSTs:4 tree)
          • Pseudomonas wenzhouensis (isolates:1; rSTs:1)
          • Pseudomonas wuhanensis (isolates:1; rSTs:1)
          • Pseudomonas xantholysinigenes (isolates:1; rSTs:1)
          • Pseudomonas xanthosomatis (isolates:1; rSTs:1)
          • Pseudomonas xionganensis (isolates:1; rSTs:1)
          • Pseudomonas yamanorum (isolates:12; rSTs:12 tree)
          • Pseudomonas yangonensis (isolates:3; rSTs:2)
          • Pseudomonas zanjanensis (isolates:1; rSTs:1)
          • Pseudomonas zeae (isolates:3; rSTs:3 tree)
          • Pseudomonas zeshuii (isolates:3; rSTs:3 tree)
          • Serpens gallinarum (isolates:1; rSTs:1)
        • Stutzerimonas (isolates:198; rSTs:165 tree)
          • Stutzerimonas azotifigens (isolates:1; rSTs:1)
          • Stutzerimonas balearica (isolates:13; rSTs:10 tree)
          • Stutzerimonas chloritidismutans (isolates:3; rSTs:3 tree)
          • Stutzerimonas decontaminans (isolates:3; rSTs:1)
          • Stutzerimonas degradans (isolates:13; rSTs:11 tree)
          • Stutzerimonas frequens (isolates:19; rSTs:14 tree)
          • Stutzerimonas kirkiae (isolates:4; rSTs:3 tree)
          • Stutzerimonas kunmingensis (isolates:8; rSTs:7 tree)
          • Stutzerimonas nitrititolerans (isolates:5; rSTs:5 tree)
          • Stutzerimonas nosocomialis (isolates:3; rSTs:3 tree)
          • Stutzerimonas sp. (isolates:3; rSTs:11 tree)
          • Stutzerimonas stutzeri (isolates:116; rSTs:91 tree)
          • Stutzerimonas urumqiensis (isolates:1; rSTs:1)
          • Stutzerimonas xanthomarina (isolates:3; rSTs:2)
          • Stutzerimonas zhaodongensis (isolates:3; rSTs:2 tree)
        • Thiopseudomonas (isolates:13; rSTs:11 tree)
          • Thiopseudomonas acetoxidans (isolates:1; rSTs:1)
          • Thiopseudomonas alkaliphila (isolates:10; rSTs:9 tree)
          • Thiopseudomonas denitrificans (isolates:2; rSTs:1)
      • Ventosimonadaceae (isolates:1; rSTs:1)
        • Ventosimonas (isolates:1; rSTs:1)
          • Ventosimonas gracilis (isolates:1; rSTs:1)
    • Salinisphaerales (isolates:19; rSTs:18 tree)
      • Salinisphaeraceae (isolates:19; rSTs:18 tree)
        • Salifodinibacter (isolates:1; rSTs:1)
          • Salifodinibacter halophilus (isolates:1; rSTs:1)
        • Salinisphaera (isolates:16; rSTs:15 tree)
          • Salinisphaera dokdonensis (isolates:1; rSTs:1)
          • Salinisphaera halophila (isolates:1; rSTs:1)
          • Salinisphaera hydrothermalis (isolates:3; rSTs:3 tree)
          • Salinisphaera japonica (isolates:1; rSTs:1)
          • Salinisphaera orenii (isolates:1; rSTs:1)
          • Salinisphaera shabanensis (isolates:2; rSTs:2)
          • Salinisphaera sp. (isolates:7; rSTs:6 tree)
        • Spectribacter (isolates:2; rSTs:2)
          • Spectribacter acetivorans (isolates:1; rSTs:1)
          • Spectribacter hydrogenooxidans (isolates:1; rSTs:1)
    • Steroidobacterales (isolates:8; rSTs:8 tree)
      • Steroidobacteraceae (isolates:8; rSTs:8 tree)
        • Peristeroidobacter (isolates:2; rSTs:2)
          • Peristeroidobacter agariperforans (isolates:1; rSTs:1)
          • Peristeroidobacter soli (isolates:1; rSTs:1)
        • Povalibacter (isolates:1; rSTs:1)
          • Povalibacter uvarum (isolates:1; rSTs:1)
        • Steroidobacter (isolates:5; rSTs:5 tree)
          • Steroidobacter agaridevorans (isolates:2; rSTs:2)
          • Steroidobacter cummioxidans (isolates:1; rSTs:1)
          • Steroidobacter denitrificans (isolates:1; rSTs:1)
          • Steroidobacter gossypii (isolates:1; rSTs:1)
    • Thiohalobacterales (isolates:4; rSTs:4 tree)
      • Thiohalobacteraceae (isolates:4; rSTs:4 tree)
        • Thiohalobacter (isolates:4; rSTs:4 tree)
          • Thiohalobacter sp. (isolates:2; rSTs:2)
          • Thiohalobacter thiocyanaticus (isolates:2; rSTs:2)
    • Thiohalomonadales (isolates:3; rSTs:3 tree)
      • Thiohalomonadaceae (isolates:2; rSTs:2)
        • Sulfurivermis (isolates:1; rSTs:1)
          • Sulfurivermis fontis (isolates:1; rSTs:1)
        • Thiohalomonas (isolates:1; rSTs:1)
          • Thiohalomonas denitrificans (isolates:1; rSTs:1)
      • Thiohalophilaceae (isolates:1; rSTs:1)
        • Thiohalophilus (isolates:1; rSTs:1)
          • Thiohalophilus thiocyanatoxydans (isolates:1; rSTs:1)
    • Thiohalorhabdales (isolates:2; rSTs:1)
      • Thiohalorhabdaceae (isolates:2; rSTs:1)
        • Thiohalorhabdus (isolates:2; rSTs:1)
          • Thiohalorhabdus denitrificans (isolates:2; rSTs:1)
    • Thiohalospirales (isolates:1; rSTs:1)
      • Thiohalospiraceae (isolates:1; rSTs:1)
        • Thiohalospira (isolates:1; rSTs:1)
          • Thiohalospira halophila (isolates:1; rSTs:1)
    • Thiotrichales (isolates:1474; rSTs:260 tree)
      • Fastidiosibacteraceae (isolates:18; rSTs:9 tree)
        • Cysteiniphilum (isolates:13; rSTs:6 tree)
          • Cysteiniphilum halobium (isolates:1; rSTs:1)
          • Cysteiniphilum litorale (isolates:2; rSTs:1)
          • Cysteiniphilum marinum (isolates:6; rSTs:2)
          • Cysteiniphilum sp. (isolates:4; rSTs:2)
        • Facilibium (isolates:1; rSTs:1)
          • Facilibium subflavum (isolates:1; rSTs:1)
        • Fangia (isolates:3; rSTs:1)
          • Fangia hongkongensis (isolates:3; rSTs:1)
        • Fastidiosibacter (isolates:1; rSTs:1)
          • Fastidiosibacter lacustris (isolates:1; rSTs:1)
      • Francisellaceae (isolates:1265; rSTs:148 tree)
        • Allofrancisella (isolates:7; rSTs:4 tree)
          • Allofrancisella frigidaquae (isolates:1; rSTs:1)
          • Allofrancisella guangzhouensis (isolates:4; rSTs:2)
          • Allofrancisella inopinata (isolates:2; rSTs:1)
        • Francisella (isolates:1257; rSTs:143 tree)
          • Candidatus Francisella endociliophora (isolates:1; rSTs:1)
          • Francisella adeliensis (isolates:5; rSTs:1)
          • Francisella endosymbiont of Amblyomma maculatum (isolates:1; rSTs:1)
          • Francisella frigiditurris (isolates:1; rSTs:1)
          • Francisella halioticida (isolates:2; rSTs:2)
          • Francisella hispaniensis (isolates:4; rSTs:3 tree)
          • Francisella marina (isolates:2; rSTs:1)
          • Francisella noatunensis (isolates:29; rSTs:5 tree)
          • Francisella opportunistica (isolates:3; rSTs:1)
          • Francisella orientalis (isolates:55; rSTs:5 tree)
          • Francisella persica (isolates:2; rSTs:1)
          • Francisella philomiragia (isolates:53; rSTs:16 tree)
          • Francisella salimarina (isolates:1; rSTs:1)
          • Francisella salina (isolates:1; rSTs:1)
          • Francisella sp. (isolates:11; rSTs:8 tree)
          • Francisella tularensis (isolates:1085; rSTs:94 tree)
          • Francisella uliginis (isolates:1; rSTs:1)
        • Pseudofrancisella (isolates:1; rSTs:1)
          • Pseudofrancisella aestuarii (isolates:1; rSTs:1)
      • Piscirickettsiaceae (isolates:147; rSTs:73 tree)
        • Cycloclasticus (isolates:5; rSTs:5 tree)
          • Cycloclasticus pugetii (isolates:2; rSTs:2)
          • Cycloclasticus sp. (isolates:2; rSTs:2)
          • Cycloclasticus zancles (isolates:1; rSTs:1)
        • Hydrogenovibrio (isolates:13; rSTs:10 tree)
          • Hydrogenovibrio crunogenus (isolates:2; rSTs:2)
          • Hydrogenovibrio halophilus (isolates:1; rSTs:1)
          • Hydrogenovibrio kuenenii (isolates:1; rSTs:1)
          • Hydrogenovibrio marinus (isolates:3; rSTs:1)
          • Hydrogenovibrio sp. (isolates:5; rSTs:4 tree)
          • Hydrogenovibrio thermophilus (isolates:1; rSTs:1)
        • Methylophaga (isolates:15; rSTs:12 tree)
          • Methylophaga aminisulfidivorans (isolates:1; rSTs:1)
          • Methylophaga frappieri (isolates:1; rSTs:1)
          • Methylophaga lonarensis (isolates:1; rSTs:1)
          • Methylophaga marina (isolates:2; rSTs:1)
          • Methylophaga muralis (isolates:1; rSTs:1)
          • Methylophaga nitratireducenticrescens (isolates:2; rSTs:2)
          • Methylophaga pinxianii (isolates:2; rSTs:1)
          • Methylophaga sp. (isolates:2; rSTs:2)
          • Methylophaga sulfidovorans (isolates:1; rSTs:1)
          • Methylophaga thiooxydans (isolates:2; rSTs:1)
        • Piscirickettsia (isolates:87; rSTs:20 tree)
          • Piscirickettsia litoralis (isolates:1; rSTs:1)
          • Piscirickettsia salmonis (isolates:86; rSTs:19 tree)
        • Sulfurivirga (isolates:1; rSTs:1)
          • Sulfurivirga caldicuralii (isolates:1; rSTs:1)
        • Thiomicrorhabdus (isolates:17; rSTs:16 tree)
          • Thiomicrorhabdus aquaedulcis (isolates:1; rSTs:1)
          • Thiomicrorhabdus arctica (isolates:1; rSTs:1)
          • Thiomicrorhabdus cannonii (isolates:1; rSTs:1)
          • Thiomicrorhabdus chilensis (isolates:1; rSTs:1)
          • Thiomicrorhabdus heinhorstiae (isolates:1; rSTs:1)
          • Thiomicrorhabdus immobilis (isolates:1; rSTs:1)
          • Thiomicrorhabdus indica (isolates:1; rSTs:1)
          • Thiomicrorhabdus lithotrophica (isolates:1; rSTs:1)
          • Thiomicrorhabdus marina (isolates:1; rSTs:1)
          • Thiomicrorhabdus sediminis (isolates:1; rSTs:1)
          • Thiomicrorhabdus sp. (isolates:6; rSTs:5 tree)
          • Thiomicrorhabdus xiamenensis (isolates:1; rSTs:1)
        • Thiomicrospira (isolates:7; rSTs:7 tree)
          • Thiomicrospira aerophila (isolates:1; rSTs:1)
          • Thiomicrospira cyclica (isolates:1; rSTs:1)
          • Thiomicrospira microaerophila (isolates:1; rSTs:1)
          • Thiomicrospira pelophila (isolates:1; rSTs:1)
          • Thiomicrospira sp. (isolates:2; rSTs:2)
          • Thiomicrospira thyasirae (isolates:1; rSTs:1)
        • Thiosulfatimonas (isolates:1; rSTs:1)
          • Thiosulfatimonas sediminis (isolates:1; rSTs:1)
        • Thiosulfativibrio (isolates:1; rSTs:1)
          • Thiosulfativibrio zosterae (isolates:1; rSTs:1)
      • Thiofilaceae (isolates:1; rSTs:1)
        • Thiofilum (isolates:1; rSTs:1)
          • Thiofilum flexile (isolates:1; rSTs:1)
      • Thiolinaceae (isolates:1; rSTs:1)
        • Thiolinea (isolates:1; rSTs:1)
          • Thiolinea disciformis (isolates:1; rSTs:1)
      • Thiotrichaceae (isolates:41; rSTs:27 tree)
        • Achromatium (isolates:2; rSTs:1)
          • Achromatium sp. (isolates:1)
          • Candidatus Achromatium palustre (isolates:1; rSTs:1)
        • Beggiatoa (isolates:3; rSTs:2)
          • Beggiatoa alba (isolates:1; rSTs:1)
          • Beggiatoa leptomitoformis (isolates:2; rSTs:1)
        • Candidatus Marithrix (isolates:6; rSTs:1)
          • Candidatus Marithrix sp. (isolates:6; rSTs:1)
        • Candidatus Parabeggiatoa (isolates:1)
          • Candidatus Parabeggiatoa sp. (isolates:1)
        • Cocleimonas (isolates:5; rSTs:2)
          • Cocleimonas flava (isolates:2; rSTs:1)
          • Cocleimonas sp. (isolates:3; rSTs:1)
        • Leucothrix (isolates:3; rSTs:3 tree)
          • Leucothrix arctica (isolates:1; rSTs:1)
          • Leucothrix mucor (isolates:1; rSTs:1)
          • Leucothrix pacifica (isolates:1; rSTs:1)
        • Thiomargarita (isolates:1)
          • Candidatus Thiomargarita nelsonii (isolates:1)
        • Thioploca (isolates:1; rSTs:1)
          • Thioploca ingrica (isolates:1; rSTs:1)
        • Thiothrix (isolates:17; rSTs:16 tree)
          • Candidatus Thiothrix anitrata (isolates:1; rSTs:1)
          • Candidatus Thiothrix sp. (isolates:1; rSTs:1)
          • Thiothrix caldifontis (isolates:1; rSTs:1)
          • Thiothrix eikelboomii (isolates:1; rSTs:1)
          • Thiothrix fructosivorans (isolates:1; rSTs:1)
          • Thiothrix lacustris (isolates:3; rSTs:3 tree)
          • Thiothrix litoralis (isolates:1; rSTs:1)
          • Thiothrix nivea (isolates:1; rSTs:1)
          • Thiothrix sp. (isolates:1)
          • Thiothrix subterranea (isolates:4; rSTs:4 tree)
          • Thiothrix unzii (isolates:1; rSTs:1)
          • Thiothrix winogradskyi (isolates:1; rSTs:1)
        • Venteria (isolates:2; rSTs:1)
          • Candidatus Venteria ishoeyi (isolates:2; rSTs:1)
    • Vibrionales (isolates:22231; rSTs:7636)
      • Vibrionaceae (isolates:22231; rSTs:7636)
        • Aliivibrio (isolates:123; rSTs:76 tree)
          • Aliivibrio finisterrensis (isolates:11; rSTs:4 tree)
          • Aliivibrio fischeri (isolates:78; rSTs:56 tree)
          • Aliivibrio logei (isolates:5; rSTs:2)
          • Aliivibrio salmonicida (isolates:6; rSTs:1)
          • Aliivibrio sifiae (isolates:4; rSTs:2)
          • Aliivibrio sp. (isolates:18; rSTs:10 tree)
          • Aliivibrio wodanis (isolates:1; rSTs:1)
        • Candidatus Photodesmus (isolates:3; rSTs:3 tree)
          • Candidatus Photodesmus blepharus (isolates:1; rSTs:1)
          • Candidatus Photodesmus katoptron (isolates:2; rSTs:2)
        • Enterovibrio (isolates:43; rSTs:24 tree)
          • Candidatus Enterovibrio escacola (isolates:17; rSTs:3 tree)
          • Candidatus Enterovibrio luxaltus (isolates:3; rSTs:2)
          • Enterovibrio baiacu (isolates:2; rSTs:1)
          • Enterovibrio calviensis (isolates:1; rSTs:1)
          • Enterovibrio coralii (isolates:1; rSTs:1)
          • Enterovibrio nigricans (isolates:2; rSTs:2)
          • Enterovibrio norvegicus (isolates:15; rSTs:12 tree)
          • Enterovibrio sp. (isolates:2; rSTs:2)
        • Grimontia (isolates:20; rSTs:16 tree)
          • Grimontia celer (isolates:1; rSTs:1)
          • Grimontia hollisae (isolates:11; rSTs:8 tree)
          • Grimontia indica (isolates:1; rSTs:1)
          • Grimontia kaedaensis (isolates:1; rSTs:1)
          • Grimontia marina (isolates:2; rSTs:1)
          • Grimontia sedimenti (isolates:1; rSTs:1)
          • Grimontia sp. (isolates:3; rSTs:3 tree)
        • Paraphotobacterium (isolates:1; rSTs:1)
          • Paraphotobacterium marinum (isolates:1; rSTs:1)
        • Photobacterium (isolates:407; rSTs:298 tree)
          • Photobacterium alginatilyticum (isolates:1; rSTs:1)
          • Photobacterium andalusiense (isolates:1; rSTs:1)
          • Photobacterium angustum (isolates:26; rSTs:8 tree)
          • Photobacterium aphoticum (isolates:4; rSTs:2)
          • Photobacterium aquae (isolates:1; rSTs:1)
          • Photobacterium aquimaris (isolates:5; rSTs:2)
          • Photobacterium arenosum (isolates:2; rSTs:2)
          • Photobacterium atrarenae (isolates:1; rSTs:1)
          • Photobacterium carnosum (isolates:21; rSTs:14 tree)
          • Photobacterium chitinilyticum (isolates:1; rSTs:1)
          • Photobacterium damselae (isolates:78; rSTs:61 tree)
          • Photobacterium frigidiphilum (isolates:1; rSTs:1)
          • Photobacterium gaetbulicola (isolates:3; rSTs:2)
          • Photobacterium galatheae (isolates:2; rSTs:1)
          • Photobacterium ganghwense (isolates:4; rSTs:3 tree)
          • Photobacterium halotolerans (isolates:4; rSTs:3 tree)
          • Photobacterium iliopiscarium (isolates:10; rSTs:6 tree)
          • Photobacterium indicum (isolates:1; rSTs:1)
          • Photobacterium jeanii (isolates:2; rSTs:1)
          • Photobacterium kishitanii (isolates:26; rSTs:15 tree)
          • Photobacterium leiognathi (isolates:105; rSTs:85 tree)
          • Photobacterium lipolyticum (isolates:1; rSTs:1)
          • Photobacterium lucens (isolates:4; rSTs:1)
          • Photobacterium lutimaris (isolates:2; rSTs:1)
          • Photobacterium malacitanum (isolates:1; rSTs:1)
          • Photobacterium marinum (isolates:2; rSTs:1)
          • Photobacterium obscurum (isolates:1; rSTs:1)
          • Photobacterium pectinilyticum (isolates:1; rSTs:1)
          • Photobacterium phosphoreum (isolates:37; rSTs:23 tree)
          • Photobacterium piscicola (isolates:5; rSTs:5 tree)
          • Photobacterium profundum (isolates:1; rSTs:1)
          • Photobacterium proteolyticum (isolates:1; rSTs:1)
          • Photobacterium rosenbergii (isolates:2; rSTs:2)
          • Photobacterium salinisoli (isolates:1; rSTs:1)
          • Photobacterium sanctipauli (isolates:2; rSTs:1)
          • Photobacterium sanguinicancri (isolates:6; rSTs:6 tree)
          • Photobacterium sp. (isolates:33; rSTs:32 tree)
          • Photobacterium swingsii (isolates:3; rSTs:2)
          • Photobacterium toruni (isolates:5; rSTs:5 tree)
        • Salinivibrio (isolates:60; rSTs:44 tree)
          • Salinivibrio costicola (isolates:3; rSTs:2)
          • Salinivibrio kushneri (isolates:14; rSTs:10 tree)
          • Salinivibrio proteolyticus (isolates:3; rSTs:3 tree)
          • Salinivibrio sharmensis (isolates:1; rSTs:1)
          • Salinivibrio siamensis (isolates:1; rSTs:1)
          • Salinivibrio socompensis (isolates:3; rSTs:2)
          • Salinivibrio sp. (isolates:35; rSTs:25 tree)
        • Thaumasiovibrio (isolates:4; rSTs:2)
          • Thaumasiovibrio occultus (isolates:2; rSTs:1)
          • Thaumasiovibrio subtropicus (isolates:2; rSTs:1)
        • Veronia (isolates:2; rSTs:2)
          • Veronia nyctiphanis (isolates:1; rSTs:1)
          • Veronia pacifica (isolates:1; rSTs:1)
        • Vibrio (isolates:21568; rSTs:7170)
          • Vibrio aerogenes (isolates:2; rSTs:1)
          • Vibrio aestivus (isolates:1; rSTs:1)
          • Vibrio aestuarianus (isolates:93; rSTs:29 tree)
          • Vibrio agarilyticus (isolates:1; rSTs:1)
          • Vibrio agarivorans (isolates:1; rSTs:1)
          • Vibrio albus (isolates:1; rSTs:1)
          • Vibrio alfacsensis (isolates:4; rSTs:4 tree)
          • Vibrio algarum (isolates:1; rSTs:1)
          • Vibrio algicola (isolates:1; rSTs:1)
          • Vibrio alginolyticus (isolates:643; rSTs:408 tree)
          • Vibrio algivorus (isolates:4; rSTs:2)
          • Vibrio amylolyticus (isolates:1; rSTs:1)
          • Vibrio anguillarum (isolates:124; rSTs:43 tree)
          • Vibrio antiquarius (isolates:14; rSTs:12 tree)
          • Vibrio aphrogenes (isolates:1; rSTs:1)
          • Vibrio aquaticus (isolates:1; rSTs:1)
          • Vibrio aquimaris (isolates:1; rSTs:1)
          • Vibrio artabrorum (isolates:2; rSTs:2)
          • Vibrio astriarenae (isolates:1; rSTs:1)
          • Vibrio atlanticus (isolates:5; rSTs:4 tree)
          • Vibrio atypicus (isolates:2; rSTs:2)
          • Vibrio azureus (isolates:3; rSTs:1)
          • Vibrio barjaei (isolates:2; rSTs:2)
          • Vibrio bathopelagicus (isolates:2; rSTs:1)
          • Vibrio bivalvicida (isolates:1; rSTs:1)
          • Vibrio brasiliensis (isolates:5; rSTs:5 tree)
          • Vibrio breoganii (isolates:61; rSTs:47 tree)
          • Vibrio campbellii (isolates:96; rSTs:45 tree)
          • Vibrio caribbeanicus (isolates:3; rSTs:2)
          • Vibrio casei (isolates:4; rSTs:3 tree)
          • Vibrio celticus (isolates:3; rSTs:1)
          • Vibrio chagasii (isolates:147; rSTs:66 tree)
          • Vibrio chanodichtyis (isolates:1; rSTs:1)
          • Vibrio chemaguriensis (isolates:1; rSTs:1)
          • Vibrio cholerae (isolates:7179; rSTs:1839)
          • Vibrio cidicii (isolates:9; rSTs:8 tree)
          • Vibrio cincinnatiensis (isolates:19; rSTs:15 tree)
          • Vibrio comitans (isolates:2; rSTs:1)
          • Vibrio coralliilyticus (isolates:39; rSTs:32 tree)
          • Vibrio coralliirubri (isolates:23; rSTs:20 tree)
          • Vibrio cortegadensis (isolates:2; rSTs:1)
          • Vibrio crassostreae (isolates:195; rSTs:38 tree)
          • Vibrio cyclitrophicus (isolates:93; rSTs:57 tree)
          • Vibrio diabolicus (isolates:1; rSTs:1)
          • Vibrio diazotrophicus (isolates:10; rSTs:8 tree)
          • Vibrio echinoideorum (isolates:4; rSTs:2)
          • Vibrio europaeus (isolates:38; rSTs:10 tree)
          • Vibrio ezurae (isolates:2; rSTs:1)
          • Vibrio floridensis (isolates:1; rSTs:1)
          • Vibrio fluminensis (isolates:1; rSTs:1)
          • Vibrio fluvialis (isolates:308; rSTs:230 tree)
          • Vibrio fortis (isolates:1; rSTs:1 tree)
          • Vibrio fujianensis (isolates:1; rSTs:1)
          • Vibrio furnissii (isolates:28; rSTs:21 tree)
          • Vibrio galatheae (isolates:1; rSTs:1)
          • Vibrio gallaecicus (isolates:4; rSTs:1)
          • Vibrio gallicus (isolates:1; rSTs:1)
          • Vibrio gangliei (isolates:2; rSTs:1)
          • Vibrio gazogenes (isolates:5; rSTs:2)
          • Vibrio gelatinilyticus (isolates:1; rSTs:1)
          • Vibrio genomosp. F10 (isolates:5; rSTs:3 tree)
          • Vibrio genomosp. F6 (isolates:2; rSTs:1)
          • Vibrio gigantis (isolates:6; rSTs:4 tree)
          • Vibrio halioticoli (isolates:2; rSTs:1)
          • Vibrio hangzhouensis (isolates:2; rSTs:2)
          • Vibrio harveyi (isolates:114; rSTs:88 tree)
          • Vibrio hepatarius (isolates:3; rSTs:3 tree)
          • Vibrio hibernica (isolates:1; rSTs:1)
          • Vibrio hippocampi (isolates:1; rSTs:1)
          • Vibrio hyugaensis (isolates:7; rSTs:5 tree)
          • Vibrio ichthyoenteri (isolates:1; rSTs:1)
          • Vibrio injensis (isolates:3; rSTs:2)
          • Vibrio intestinalis (isolates:1; rSTs:1)
          • Vibrio inusitatus (isolates:2; rSTs:1)
          • Vibrio ishigakensis (isolates:4; rSTs:4 tree)
          • Vibrio japonicus (isolates:1; rSTs:1)
          • Vibrio jasicida (isolates:18; rSTs:19 tree)
          • Vibrio kanaloae (isolates:18; rSTs:15 tree)
          • Vibrio lentus (isolates:99; rSTs:40 tree)
          • Vibrio litoralis (isolates:2; rSTs:2)
          • Vibrio madracius (isolates:1)
          • Vibrio maerlii (isolates:1; rSTs:1)
          • Vibrio mangrovi (isolates:3; rSTs:1)
          • Vibrio marinisediminis (isolates:1; rSTs:1)
          • Vibrio marisflavi (isolates:2; rSTs:2)
          • Vibrio maritimus (isolates:4; rSTs:2)
          • Vibrio mediterranei (isolates:16; rSTs:12 tree)
          • Vibrio methylphosphonaticus (isolates:1; rSTs:1)
          • Vibrio metoecus (isolates:28; rSTs:25 tree)
          • Vibrio metschnikovii (isolates:165; rSTs:112 tree)
          • Vibrio mexicanus (isolates:1; rSTs:1)
          • Vibrio mimicus (isolates:44; rSTs:35 tree)
          • Vibrio mytili (isolates:2; rSTs:2)
          • Vibrio natriegens (isolates:18; rSTs:10 tree)
          • Vibrio navarrensis (isolates:38; rSTs:30 tree)
          • Vibrio neonatus (isolates:1; rSTs:1)
          • Vibrio neptunius (isolates:16; rSTs:6 tree)
          • Vibrio nereis (isolates:3; rSTs:2)
          • Vibrio nigripulchritudo (isolates:26; rSTs:11 tree)
          • Vibrio nitrifigilis (isolates:1; rSTs:1)
          • Vibrio ordalii (isolates:2; rSTs:1)
          • Vibrio orientalis (isolates:2; rSTs:1)
          • Vibrio ostreae (isolates:1; rSTs:1)
          • Vibrio ostreicida (isolates:3; rSTs:2)
          • Vibrio ouci (isolates:1; rSTs:1)
          • Vibrio owensii (isolates:35; rSTs:47 tree)
          • Vibrio pacinii (isolates:1; rSTs:1)
          • Vibrio palustris (isolates:2; rSTs:1)
          • Vibrio panuliri (isolates:4; rSTs:3 tree)
          • Vibrio paracholerae (isolates:62; rSTs:28 tree)
          • Vibrio parahaemolyticus (isolates:9662; rSTs:2294 tree)
          • Vibrio paucivorans (isolates:1; rSTs:1)
          • Vibrio pectenicida (isolates:3; rSTs:2)
          • Vibrio pelagius (isolates:2; rSTs:2)
          • Vibrio penaeicida (isolates:9; rSTs:6 tree)
          • Vibrio plantisponsor (isolates:3; rSTs:1)
          • Vibrio pomeroyi (isolates:1; rSTs:1)
          • Vibrio ponticus (isolates:3; rSTs:2)
          • Vibrio porteresiae (isolates:2; rSTs:1)
          • Vibrio profundi (isolates:1; rSTs:1)
          • Vibrio proteolyticus (isolates:2; rSTs:1)
          • Vibrio qingdaonensis (isolates:1; rSTs:1)
          • Vibrio qinghaiensis (isolates:2; rSTs:1)
          • Vibrio quintilis (isolates:2; rSTs:1)
          • Vibrio rarus (isolates:1; rSTs:1)
          • Vibrio renipiscarius (isolates:2; rSTs:2)
          • Vibrio rhizosphaerae (isolates:3; rSTs:3 tree)
          • Vibrio rhodolitus (isolates:1; rSTs:1)
          • Vibrio rotiferianus (isolates:16; rSTs:15 tree)
          • Vibrio ruber (isolates:3; rSTs:2)
          • Vibrio rumoiensis (isolates:1; rSTs:1)
          • Vibrio salilacus (isolates:2; rSTs:1)
          • Vibrio salinus (isolates:1; rSTs:1)
          • Vibrio scophthalmi (isolates:5; rSTs:4 tree)
          • Vibrio sinaloensis (isolates:1; rSTs:1)
          • Vibrio sinensis (isolates:1; rSTs:1)
          • Vibrio sinus (isolates:1; rSTs:1)
          • Vibrio sonorensis (isolates:1; rSTs:1)
          • Vibrio sp. (isolates:554; rSTs:467 tree)
          • Vibrio spartinae (isolates:3; rSTs:2)
          • Vibrio splendidus (isolates:190; rSTs:102 tree)
          • Vibrio stylophorae (isolates:1; rSTs:1)
          • Vibrio superstes (isolates:2; rSTs:1)
          • Vibrio syngnathi (isolates:1; rSTs:1)
          • Vibrio taketomensis (isolates:2; rSTs:2)
          • Vibrio tapetis (isolates:1; rSTs:1)
          • Vibrio tarriae (isolates:15; rSTs:9 tree)
          • Vibrio tasmaniensis (isolates:2; rSTs:1)
          • Vibrio tetraodonis (isolates:3; rSTs:2)
          • Vibrio thalassae (isolates:1; rSTs:1)
          • Vibrio toranzoniae (isolates:6; rSTs:5 tree)
          • Vibrio tritonius (isolates:3; rSTs:3 tree)
          • Vibrio tubiashii (isolates:8; rSTs:6 tree)
          • Vibrio ulleungensis (isolates:1; rSTs:1)
          • Vibrio variabilis (isolates:1; rSTs:1)
          • Vibrio viridaestus (isolates:1; rSTs:1)
          • Vibrio vulnificus (isolates:1054; rSTs:681 tree)
          • Vibrio xiamenensis (isolates:1; rSTs:1)
          • Vibrio xuii (isolates:1; rSTs:2)
          • Vibrio zhanjiangensis (isolates:1; rSTs:1)
          • Vibrio zhugei (isolates:2; rSTs:1)
          • Vibrio ziniensis (isolates:1; rSTs:1)
    • Woeseiales (isolates:1; rSTs:1)
      • Woeseiaceae (isolates:1; rSTs:1)
        • Woeseia (isolates:1; rSTs:1)
          • Woeseia oceani (isolates:1; rSTs:1)
  • Hydrogenophilia (isolates:12; rSTs:11 tree)
    • Hydrogenophilales (isolates:11; rSTs:10 tree)
      • Hydrogenophilaceae (isolates:11; rSTs:10 tree)
        • Hydrogenophilus (isolates:4; rSTs:4 tree)
          • Hydrogenophilus thermoluteolus (isolates:3; rSTs:3 tree)
          • Hydrogenophilus thiooxidans (isolates:1; rSTs:1)
        • Tepidiphilus (isolates:7; rSTs:6 tree)
          • Tepidiphilus baoligensis (isolates:1; rSTs:1)
          • Tepidiphilus margaritifer (isolates:1; rSTs:1)
          • Tepidiphilus olei (isolates:1; rSTs:1)
          • Tepidiphilus sp. (isolates:1; rSTs:1)
          • Tepidiphilus succinatimandens (isolates:1; rSTs:1)
          • Tepidiphilus thermophilus (isolates:2; rSTs:1)
  • Zetaproteobacteria (isolates:13; rSTs:12 tree)
    • Mariprofundales (isolates:13; rSTs:12 tree)
      • Mariprofundaceae (isolates:12; rSTs:11 tree)
        • Mariprofundus (isolates:12; rSTs:11 tree)
          • Mariprofundus aestuarium (isolates:1; rSTs:1)
          • Mariprofundus erugo (isolates:2; rSTs:2)
          • Mariprofundus ferrinatatus (isolates:1; rSTs:1)
          • Mariprofundus ferrooxydans (isolates:4; rSTs:3 tree)
          • Mariprofundus micogutta (isolates:1; rSTs:1)
          • Mariprofundus sp. (isolates:3; rSTs:3 tree)
• Rhodothermota (isolates:259; rSTs:173 tree)
  • Rhodothermia (isolates:259; rSTs:173 tree)
    • Rhodothermales (isolates:259; rSTs:173 tree)
      • Rhodothermaceae (isolates:8; rSTs:7 tree)
        • Rhodocaloribacter (isolates:1; rSTs:1)
          • Rhodocaloribacter litoris (isolates:1; rSTs:1)
        • Rhodothermus (isolates:7; rSTs:6 tree)
          • Rhodothermus bifroesti (isolates:1; rSTs:1)
          • Rhodothermus marinus (isolates:5; rSTs:4 tree)
          • Rhodothermus profundi (isolates:1; rSTs:1)
      • Rubricoccaceae (isolates:5; rSTs:2)
        • Rubricoccus (isolates:1)
          • Rubricoccus marinus (isolates:1)
        • Rubrivirga (isolates:4; rSTs:2)
          • Rubrivirga litoralis (isolates:1; rSTs:1)
          • Rubrivirga marina (isolates:1)
          • Rubrivirga sp. (isolates:2; rSTs:1)
      • Salinibacteraceae (isolates:243; rSTs:161 tree)
        • Salinibacter (isolates:242; rSTs:160 tree)
          • Salinibacter altiplanensis (isolates:3; rSTs:3 tree)
          • Salinibacter grassmerensis (isolates:1; rSTs:1)
          • Salinibacter pepae (isolates:1; rSTs:1)
          • Salinibacter ruber (isolates:228; rSTs:147 tree)
          • Salinibacter sp. (isolates:9; rSTs:8 tree)
        • Salinivenus (isolates:1; rSTs:1)
          • Salinivenus lutea (isolates:1; rSTs:1)
      • Salisaetaceae (isolates:3; rSTs:3 tree)
        • Longibacter (isolates:1; rSTs:1)
          • Longibacter salinarum (isolates:1; rSTs:1)
        • Longimonas (isolates:1; rSTs:1)
          • Longimonas halophila (isolates:1; rSTs:1)
        • Salisaeta (isolates:1; rSTs:1)
          • Salisaeta longa (isolates:1; rSTs:1)
• Spirochaetota (isolates:2734; rSTs:1068 tree)
  • Spirochaetia (isolates:2734; rSTs:1068 tree)
    • Brachyspirales (isolates:251; rSTs:152 tree)
      • Brachyspiraceae (isolates:251; rSTs:152 tree)
        • Brachyspira (isolates:251; rSTs:152 tree)
          • Brachyspira aalborgi (isolates:17; rSTs:15 tree)
          • Brachyspira alvinipulli (isolates:2; rSTs:2)
          • Brachyspira catarrhinii (isolates:1)
          • Brachyspira hampsonii (isolates:10; rSTs:7 tree)
          • Brachyspira hyodysenteriae (isolates:142; rSTs:71 tree)
          • Brachyspira innocens (isolates:3; rSTs:2)
          • Brachyspira intermedia (isolates:12; rSTs:9 tree)
          • Brachyspira murdochii (isolates:5; rSTs:5 tree)
          • Brachyspira pilosicoli (isolates:47; rSTs:34 tree)
          • Brachyspira pulli (isolates:8; rSTs:5 tree)
          • Brachyspira sp. (isolates:3; rSTs:1)
          • Brachyspira suanatina (isolates:1; rSTs:1)
    • Brevinematales (isolates:1; rSTs:1)
      • Brevinemataceae (isolates:1; rSTs:1)
        • Brevinema (isolates:1; rSTs:1)
          • Brevinema andersonii (isolates:1; rSTs:1)
    • Leptospirales (isolates:1026; rSTs:461 tree)
      • Leptospiraceae (isolates:1026; rSTs:461 tree)
        • Leptonema (isolates:2; rSTs:1)
          • Leptonema illini (isolates:2; rSTs:1)
        • Leptospira (isolates:1023; rSTs:459 tree)
          • Leptospira abararensis (isolates:1; rSTs:1)
          • Leptospira adleri (isolates:3; rSTs:1)
          • Leptospira ainazelensis (isolates:1; rSTs:1)
          • Leptospira ainlahdjerensis (isolates:1; rSTs:1)
          • Leptospira alexanderi (isolates:7; rSTs:5 tree)
          • Leptospira alstonii (isolates:6; rSTs:3 tree)
          • Leptospira andrefontaineae (isolates:1; rSTs:1)
          • Leptospira bandrabouensis (isolates:8; rSTs:4 tree)
          • Leptospira barantonii (isolates:2; rSTs:2)
          • Leptospira biflexa (isolates:7; rSTs:4 tree)
          • Leptospira borgpetersenii (isolates:166; rSTs:30 tree)
          • Leptospira bourretii (isolates:4; rSTs:2)
          • Leptospira bouyouniensis (isolates:3; rSTs:3 tree)
          • Leptospira brenneri (isolates:2; rSTs:2)
          • Leptospira broomii (isolates:2; rSTs:1)
          • Leptospira chreensis (isolates:1; rSTs:1)
          • Leptospira congkakensis (isolates:3; rSTs:1)
          • Leptospira dzoumogneensis (isolates:1; rSTs:1)
          • Leptospira ellinghausenii (isolates:1; rSTs:1)
          • Leptospira ellisii (isolates:2; rSTs:2)
          • Leptospira fainei (isolates:2; rSTs:1)
          • Leptospira fletcheri (isolates:1; rSTs:1)
          • Leptospira fluminis (isolates:1; rSTs:1)
          • Leptospira gomenensis (isolates:4; rSTs:1)
          • Leptospira haakeii (isolates:2; rSTs:1)
          • Leptospira harrisiae (isolates:2; rSTs:1)
          • Leptospira hartskeerlii (isolates:2; rSTs:1)
          • Leptospira idonii (isolates:1; rSTs:1)
          • Leptospira ilyithenensis (isolates:1; rSTs:1)
          • Leptospira inadai (isolates:3; rSTs:1)
          • Leptospira interrogans (isolates:476; rSTs:146 tree)
          • Leptospira jelokensis (isolates:2; rSTs:2)
          • Leptospira johnsonii (isolates:1; rSTs:1)
          • Leptospira kanakyensis (isolates:5; rSTs:3 tree)
          • Leptospira kemamanensis (isolates:1; rSTs:1)
          • Leptospira kirschneri (isolates:46; rSTs:30 tree)
          • Leptospira kmetyi (isolates:7; rSTs:5 tree)
          • Leptospira kobayashii (isolates:1; rSTs:1)
          • Leptospira koniambonensis (isolates:1; rSTs:1)
          • Leptospira langatensis (isolates:2; rSTs:2)
          • Leptospira levettii (isolates:22; rSTs:19 tree)
          • Leptospira licerasiae (isolates:8; rSTs:3 tree)
          • Leptospira limi (isolates:1; rSTs:1)
          • Leptospira mayottensis (isolates:6; rSTs:4 tree)
          • Leptospira meyeri (isolates:13; rSTs:9 tree)
          • Leptospira montravelensis (isolates:2; rSTs:1)
          • Leptospira mtsangambouensis (isolates:2; rSTs:2)
          • Leptospira neocaledonica (isolates:1; rSTs:1)
          • Leptospira noguchii (isolates:34; rSTs:25 tree)
          • Leptospira noumeaensis (isolates:1; rSTs:1)
          • Leptospira ognonensis (isolates:1; rSTs:1)
          • Leptospira paudalimensis (isolates:1; rSTs:1)
          • Leptospira perdikensis (isolates:1; rSTs:1)
          • Leptospira perolatii (isolates:2; rSTs:1)
          • Leptospira ryugenii (isolates:1; rSTs:1)
          • Leptospira saintgironsiae (isolates:1; rSTs:1)
          • Leptospira sanjuanensis (isolates:2; rSTs:2)
          • Leptospira santarosai (isolates:75; rSTs:56 tree)
          • Leptospira sarikeiensis (isolates:1; rSTs:1)
          • Leptospira selangorensis (isolates:3; rSTs:2)
          • Leptospira semungkisensis (isolates:1; rSTs:1)
          • Leptospira soteropolitanensis (isolates:5; rSTs:1)
          • Leptospira sp. (isolates:16; rSTs:31 tree)
          • Leptospira stimsonii (isolates:4; rSTs:3 tree)
          • Leptospira terpstrae (isolates:2; rSTs:1)
          • Leptospira tipperaryensis (isolates:1; rSTs:1)
          • Leptospira vanthielii (isolates:3; rSTs:2)
          • Leptospira venezuelensis (isolates:6; rSTs:2)
          • Leptospira weilii (isolates:2; rSTs:1)
          • Leptospira wolbachii (isolates:2; rSTs:1)
          • Leptospira wolffii (isolates:8; rSTs:4 tree)
          • Leptospira yanagawae (isolates:3; rSTs:2)
          • Leptospira yasudae (isolates:9; rSTs:7 tree)
        • Turneriella (isolates:1; rSTs:1)
          • Turneriella parva (isolates:1; rSTs:1)
    • Spirochaetales (isolates:1456; rSTs:454 tree)
      • Borreliaceae (isolates:526; rSTs:285 tree)
        • Borrelia (isolates:89; rSTs:46 tree)
          • Borrelia anserina (isolates:3; rSTs:1)
          • Borrelia coriaceae (isolates:3; rSTs:1)
          • Borrelia crocidurae (isolates:3; rSTs:3 tree)
          • Borrelia hermsii (isolates:9; rSTs:6 tree)
          • Borrelia hispanica (isolates:1; rSTs:1)
          • Borrelia maritima (isolates:1; rSTs:1)
          • Borrelia miyamotoi (isolates:47; rSTs:14 tree)
          • Borrelia nietonii (isolates:2; rSTs:2)
          • Borrelia parkeri (isolates:3; rSTs:2)
          • Borrelia persica (isolates:1; rSTs:1)
          • Borrelia puertoricensis (isolates:1; rSTs:1)
          • Borrelia recurrentis (isolates:1; rSTs:1)
          • Borrelia sp. (isolates:7; rSTs:7 tree)
          • Borrelia turcica (isolates:1; rSTs:1)
          • Borrelia turicatae (isolates:5; rSTs:3 tree)
          • Candidatus Borrelia fainii (isolates:1; rSTs:1)
        • Borreliella (isolates:437; rSTs:239 tree)
          • Borreliella afzelii (isolates:38; rSTs:25 tree)
          • Borreliella americana (isolates:5; rSTs:4 tree)
          • Borreliella andersonii (isolates:2; rSTs:2)
          • Borreliella bavariensis (isolates:47; rSTs:28 tree)
          • Borreliella bissettiae (isolates:4; rSTs:4 tree)
          • Borreliella burgdorferi (isolates:159; rSTs:70 tree)
          • Borreliella californiensis (isolates:3; rSTs:1)
          • Borreliella carolinensis (isolates:4; rSTs:3 tree)
          • Borreliella finlandensis (isolates:2; rSTs:2)
          • Borreliella garinii (isolates:124; rSTs:64 tree)
          • Borreliella japonica (isolates:3; rSTs:2)
          • Borreliella kurtenbachii (isolates:2; rSTs:1)
          • Borreliella lanei (isolates:2; rSTs:1)
          • Borreliella lusitaniae (isolates:3; rSTs:3 tree)
          • Borreliella mayonii (isolates:2; rSTs:2)
          • Borreliella sinica (isolates:1; rSTs:1)
          • Borreliella spielmanii (isolates:3; rSTs:3 tree)
          • Borreliella tanukii (isolates:4; rSTs:4 tree)
          • Borreliella turdi (isolates:5; rSTs:5 tree)
          • Borreliella valaisiana (isolates:19; rSTs:11 tree)
          • Borreliella yangtzensis (isolates:4; rSTs:2)
          • Candidatus Borreliella tachyglossi (isolates:1; rSTs:1)
      • Breznakiellaceae (isolates:3; rSTs:3 tree)
        • Breznakiella (isolates:1; rSTs:1)
          • Breznakiella homolactica (isolates:1; rSTs:1)
        • Gracilinema (isolates:1; rSTs:1)
          • Gracilinema caldarium (isolates:1; rSTs:1)
        • Leadbettera (isolates:1; rSTs:1)
          • Leadbettera azotonutricia (isolates:1; rSTs:1)
      • Sphaerochaetaceae (isolates:9; rSTs:8 tree)
        • Parasphaerochaeta (isolates:1; rSTs:1)
          • Parasphaerochaeta coccoides (isolates:1; rSTs:1)
        • Sphaerochaeta (isolates:8; rSTs:7 tree)
          • Sphaerochaeta associata (isolates:2; rSTs:1)
          • Sphaerochaeta globosa (isolates:1; rSTs:1)
          • Sphaerochaeta halotolerans (isolates:2; rSTs:2)
          • Sphaerochaeta pleomorpha (isolates:1; rSTs:1)
          • Sphaerochaeta sp. (isolates:2; rSTs:2)
      • Spirochaetaceae (isolates:25; rSTs:16 tree)
        • Alkalispirochaeta (isolates:3; rSTs:3 tree)
          • Alkalispirochaeta alkalica (isolates:1; rSTs:1)
          • Alkalispirochaeta americana (isolates:1; rSTs:1)
          • Alkalispirochaeta sphaeroplastigenens (isolates:1; rSTs:1)
        • Bullifex (isolates:1; rSTs:1)
          • Bullifex porci (isolates:1; rSTs:1)
        • Entomospira (isolates:8)
          • Entomospira culicis (isolates:4)
          • Entomospira entomophila (isolates:2)
          • Entomospira nematocerorum (isolates:2)
        • Marispirochaeta (isolates:1; rSTs:1)
          • Marispirochaeta aestuarii (isolates:1; rSTs:1)
        • Oceanispirochaeta (isolates:1; rSTs:1)
          • Oceanispirochaeta crateris (isolates:1; rSTs:1)
        • Salinispira (isolates:1; rSTs:1)
          • Salinispira pacifica (isolates:1; rSTs:1)
        • Sediminispirochaeta (isolates:3; rSTs:2)
          • Sediminispirochaeta bajacaliforniensis (isolates:1; rSTs:1)
          • Sediminispirochaeta smaragdinae (isolates:2; rSTs:1)
        • Spirochaeta (isolates:6; rSTs:6 tree)
          • Spirochaeta africana (isolates:1; rSTs:1)
          • Spirochaeta cellobiosiphila (isolates:1; rSTs:1)
          • Spirochaeta isovalerica (isolates:1; rSTs:1)
          • Spirochaeta lutea (isolates:1; rSTs:1)
          • Spirochaeta thermophila (isolates:2; rSTs:2)
        • Thiospirochaeta (isolates:1; rSTs:1)
          • Thiospirochaeta perfilievii (isolates:1; rSTs:1)
      • Treponemataceae (isolates:892; rSTs:142 tree)
        • Brucepastera (isolates:1; rSTs:1)
          • Brucepastera parasyntrophica (isolates:1; rSTs:1)
        • Teretinema (isolates:1; rSTs:1)
          • Teretinema zuelzerae (isolates:1; rSTs:1)
        • Treponema (isolates:890; rSTs:140 tree)
          • Treponema berlinense (isolates:1; rSTs:1)
          • Treponema brennaborense (isolates:1; rSTs:1)
          • Treponema bryantii (isolates:4; rSTs:4 tree)
          • Treponema denticola (isolates:44; rSTs:33 tree)
          • Treponema maltophilum (isolates:1; rSTs:1)
          • Treponema medium (isolates:7; rSTs:2)
          • Treponema pallidum (isolates:747; rSTs:28 tree)
          • Treponema paraluiscuniculi (isolates:2; rSTs:2)
          • Treponema parvum (isolates:3; rSTs:3 tree)
          • Treponema pectinovorum (isolates:5; rSTs:4 tree)
          • Treponema pedis (isolates:9; rSTs:8 tree)
          • Treponema peruense (isolates:1; rSTs:1)
          • Treponema phagedenis (isolates:15; rSTs:11 tree)
          • Treponema porcinum (isolates:1; rSTs:1)
          • Treponema primitia (isolates:2; rSTs:2)
          • Treponema putidum (isolates:5; rSTs:4 tree)
          • Treponema rectale (isolates:1; rSTs:1)
          • Treponema ruminis (isolates:1; rSTs:1)
          • Treponema saccharophilum (isolates:2; rSTs:1)
          • Treponema socranskii (isolates:6; rSTs:4 tree)
          • Treponema sp. (isolates:21; rSTs:20 tree)
          • Treponema succinifaciens (isolates:1; rSTs:1)
          • Treponema vincentii (isolates:9; rSTs:5 tree)
          • Treponema zioleckii (isolates:1; rSTs:1)
• Synergistota (isolates:48; rSTs:40 tree)
  • Synergistia (isolates:48; rSTs:40 tree)
    • Synergistales (isolates:48; rSTs:40 tree)
      • Acetomicrobiaceae (isolates:4; rSTs:4 tree)
        • Acetomicrobium (isolates:4; rSTs:4 tree)
          • Acetomicrobium hydrogeniformans (isolates:2; rSTs:2)
          • Acetomicrobium mobile (isolates:1; rSTs:1)
          • Acetomicrobium thermoterrenum (isolates:1; rSTs:1)
      • Aminiphilaceae (isolates:1; rSTs:1)
        • Aminiphilus (isolates:1; rSTs:1)
          • Aminiphilus circumscriptus (isolates:1; rSTs:1)
      • Aminithiophilaceae (isolates:1; rSTs:1)
        • Aminithiophilus (isolates:1; rSTs:1)
          • Aminithiophilus ramosus (isolates:1; rSTs:1)
      • Aminobacteriaceae (isolates:7; rSTs:6 tree)
        • Aminivibrio (isolates:1; rSTs:1)
          • Aminivibrio pyruvatiphilus (isolates:1; rSTs:1)
        • Aminobacterium (isolates:4; rSTs:3 tree)
          • Aminobacterium colombiense (isolates:2; rSTs:1)
          • Aminobacterium mobile (isolates:1; rSTs:1)
          • Aminobacterium sp. (isolates:1; rSTs:1)
        • Fretibacterium (isolates:2; rSTs:2)
          • Fretibacterium fastidiosum (isolates:1; rSTs:1)
          • Fretibacterium sp. (isolates:1; rSTs:1)
      • Dethiosulfovibrionaceae (isolates:15; rSTs:15 tree)
        • Dethiosulfovibrio (isolates:4; rSTs:4 tree)
          • Dethiosulfovibrio acidaminovorans (isolates:1; rSTs:1)
          • Dethiosulfovibrio faecalis (isolates:1; rSTs:1)
          • Dethiosulfovibrio peptidovorans (isolates:1; rSTs:1)
          • Dethiosulfovibrio salsuginis (isolates:1; rSTs:1)
        • Jonquetella (isolates:3; rSTs:3 tree)
          • Jonquetella anthropi (isolates:2; rSTs:2)
          • Jonquetella sp. (isolates:1; rSTs:1)
        • Pyramidobacter (isolates:8; rSTs:8 tree)
          • Pyramidobacter piscolens (isolates:4; rSTs:4 tree)
          • Pyramidobacter porci (isolates:1; rSTs:1)
          • Pyramidobacter sp. (isolates:3; rSTs:3 tree)
      • Synergistaceae (isolates:18; rSTs:12 tree)
        • Aminomonas (isolates:1; rSTs:1)
          • Aminomonas paucivorans (isolates:1; rSTs:1)
        • Cloacibacillus (isolates:9; rSTs:8 tree)
          • Cloacibacillus evryensis (isolates:5; rSTs:5 tree)
          • Cloacibacillus porcorum (isolates:3; rSTs:2)
          • Cloacibacillus sp. (isolates:1; rSTs:1)
        • Synergistes (isolates:6; rSTs:1)
          • Synergistes jonesii (isolates:6; rSTs:1)
        • Thermanaerovibrio (isolates:2; rSTs:2)
          • Thermanaerovibrio acidaminovorans (isolates:1; rSTs:1)
          • Thermanaerovibrio velox (isolates:1; rSTs:1)
      • Thermovirgaceae (isolates:2; rSTs:1)
        • Thermovirga (isolates:2; rSTs:1)
          • Thermovirga lienii (isolates:2; rSTs:1)
• Thermodesulfobacteriota (isolates:398; rSTs:332 tree)
  • Candidatus Desulfofervidia (isolates:1; rSTs:1)
    • Candidatus Desulfofervidales (isolates:1; rSTs:1)
      • Candidatus Desulfofervidaceae (isolates:1; rSTs:1)
        • Candidatus Desulfofervidus (isolates:1; rSTs:1)
          • Candidatus Desulfofervidus auxilii (isolates:1; rSTs:1)
  • Deferrisomatia (isolates:1; rSTs:1)
    • Deferrisomatales (isolates:1; rSTs:1)
      • Deferrisomataceae (isolates:1; rSTs:1)
        • Deferrisoma (isolates:1; rSTs:1)
          • Deferrisoma camini (isolates:1; rSTs:1)
  • Desulfarculia (isolates:5; rSTs:2)
    • Candidatus Adiutricales (isolates:1)
      • Candidatus Adiutricaceae (isolates:1)
        • Candidatus Adiutrix (isolates:1)
          • Candidatus Adiutrix intracellularis (isolates:1)
    • Desulfarculales (isolates:4; rSTs:2)
      • Desulfarculaceae (isolates:4; rSTs:2)
        • Desulfarculus (isolates:2; rSTs:1)
          • Desulfarculus baarsii (isolates:2; rSTs:1)
        • Desulfoferula (isolates:1)
          • Desulfoferula mesophila (isolates:1)
        • Dethiosulfatarculus (isolates:1; rSTs:1)
          • Dethiosulfatarculus sandiegensis (isolates:1; rSTs:1)
  • Desulfobaccia (isolates:2; rSTs:1)
    • Desulfobaccales (isolates:2; rSTs:1)
      • Desulfobaccaceae (isolates:2; rSTs:1)
        • Desulfobacca (isolates:2; rSTs:1)
          • Desulfobacca acetoxidans (isolates:2; rSTs:1)
  • Desulfobacteria (isolates:49; rSTs:44 tree)
    • Desulfatiglandales (isolates:1; rSTs:1)
      • Desulfatiglandaceae (isolates:1; rSTs:1)
        • Desulfatiglans (isolates:1; rSTs:1)
          • Desulfatiglans anilini (isolates:1; rSTs:1)
    • Desulfobacterales (isolates:48; rSTs:43 tree)
      • Candidatus Magnetomoraceae (isolates:1; rSTs:1)
        • Candidatus Magnetomorum (isolates:1; rSTs:1)
          • Candidatus Magnetomorum sp. (isolates:1; rSTs:1)
      • Desulfatibacillaceae (isolates:3; rSTs:3 tree)
        • Desulfatibacillum (isolates:3; rSTs:3 tree)
          • Desulfatibacillum aliphaticivorans (isolates:2; rSTs:2)
          • Desulfatibacillum alkenivorans (isolates:1; rSTs:1)
      • Desulfatirhabdiaceae (isolates:1; rSTs:1)
        • Desulfatirhabdium (isolates:1; rSTs:1)
          • Desulfatirhabdium butyrativorans (isolates:1; rSTs:1)
      • Desulfobacteraceae (isolates:20; rSTs:18 tree)
        • Candidatus Magnetoglobus (isolates:1; rSTs:1)
          • Candidatus Magnetoglobus multicellularis (isolates:1; rSTs:1)
        • Desulfamplus (isolates:1; rSTs:1)
          • Desulfamplus magnetovallimortis (isolates:1; rSTs:1)
        • Desulfobacter (isolates:7; rSTs:5 tree)
          • Desulfobacter curvatus (isolates:1; rSTs:1)
          • Desulfobacter hydrogenophilus (isolates:3; rSTs:1)
          • Desulfobacter latus (isolates:1; rSTs:1)
          • Desulfobacter postgatei (isolates:1; rSTs:1)
          • Desulfobacter vibrioformis (isolates:1; rSTs:1)
        • Desulfobacula (isolates:3; rSTs:3 tree)
          • Desulfobacula phenolica (isolates:1; rSTs:1)
          • Desulfobacula sp. (isolates:1; rSTs:1)
          • Desulfobacula toluolica (isolates:1; rSTs:1)
        • Desulfobotulus (isolates:3; rSTs:3 tree)
          • Desulfobotulus alkaliphilus (isolates:1; rSTs:1)
          • Desulfobotulus mexicanus (isolates:1; rSTs:1)
          • Desulfobotulus pelophilus (isolates:1; rSTs:1)
        • Desulfocicer (isolates:1; rSTs:1)
          • Desulfocicer vacuolatum (isolates:1; rSTs:1)
        • Desulforapulum (isolates:1; rSTs:1)
          • Desulforapulum autotrophicum (isolates:1; rSTs:1)
        • Desulfospira (isolates:1; rSTs:1)
          • Desulfospira joergensenii (isolates:1; rSTs:1)
        • Desulfotignum (isolates:2; rSTs:2)
          • Desulfotignum balticum (isolates:1; rSTs:1)
          • Desulfotignum phosphitoxidans (isolates:1; rSTs:1)
      • Desulfococcaceae (isolates:7; rSTs:4 tree)
        • Desulfococcus (isolates:4; rSTs:1)
          • Desulfococcus multivorans (isolates:4; rSTs:1)
        • Desulfonema (isolates:3; rSTs:3 tree)
          • Desulfonema ishimotonii (isolates:1; rSTs:1)
          • Desulfonema limicola (isolates:1; rSTs:1)
          • Desulfonema magnum (isolates:1; rSTs:1)
      • Desulfofabaceae (isolates:1; rSTs:1)
        • Desulfofaba (isolates:1; rSTs:1)
          • Desulfofaba hansenii (isolates:1; rSTs:1)
      • Desulfolunaceae (isolates:4; rSTs:4 tree)
        • Desulfoluna (isolates:4; rSTs:4 tree)
          • Desulfoluna butyratoxydans (isolates:1; rSTs:1)
          • Desulfoluna limicola (isolates:1; rSTs:1)
          • Desulfoluna spongiiphila (isolates:2; rSTs:2)
      • Desulforegulaceae (isolates:1; rSTs:1)
        • Desulforegula (isolates:1; rSTs:1)
          • Desulforegula conservatrix (isolates:1; rSTs:1)
      • Desulfosalsimonadaceae (isolates:1; rSTs:1)
        • Desulfosalsimonas (isolates:1; rSTs:1)
          • Desulfosalsimonas propionicica (isolates:1; rSTs:1)
      • Desulfosarcinaceae (isolates:8; rSTs:8 tree)
        • Desulfatitalea (isolates:2; rSTs:2)
          • Desulfatitalea alkaliphila (isolates:1; rSTs:1)
          • Desulfatitalea tepidiphila (isolates:1; rSTs:1)
        • Desulfosarcina (isolates:6; rSTs:6 tree)
          • Desulfosarcina alkanivorans (isolates:1; rSTs:1)
          • Desulfosarcina cetonica (isolates:2; rSTs:2)
          • Desulfosarcina ovata (isolates:2; rSTs:2)
          • Desulfosarcina widdelii (isolates:1; rSTs:1)
      • Desulfosudaceae (isolates:1; rSTs:1)
        • Desulfosudis (isolates:1; rSTs:1)
          • Desulfosudis oleivorans (isolates:1; rSTs:1)
  • Desulfobulbia (isolates:28; rSTs:23 tree)
    • Desulfobulbales (isolates:28; rSTs:23 tree)
      • Desulfobulbaceae (isolates:18; rSTs:13 tree)
        • Desulfobulbus (isolates:8; rSTs:5 tree)
          • Desulfobulbus alkaliphilus (isolates:1; rSTs:1)
          • Desulfobulbus elongatus (isolates:1; rSTs:1)
          • Desulfobulbus oligotrophicus (isolates:1)
          • Desulfobulbus oralis (isolates:1; rSTs:1)
          • Desulfobulbus propionicus (isolates:3; rSTs:1)
          • Desulfobulbus rhabdoformis (isolates:1; rSTs:1)
        • Desulfogranum (isolates:3; rSTs:3 tree)
          • Desulfogranum japonicum (isolates:1; rSTs:1)
          • Desulfogranum marinum (isolates:1; rSTs:1)
          • Desulfogranum mediterraneum (isolates:1; rSTs:1)
        • Desulfolithobacter (isolates:1; rSTs:1)
          • Desulfolithobacter dissulfuricans (isolates:1; rSTs:1)
        • Desulfomarina (isolates:1; rSTs:1)
          • Desulfomarina profundi (isolates:1; rSTs:1)
        • Desulfoprunum (isolates:2; rSTs:1)
          • Desulfoprunum benzoelyticum (isolates:2; rSTs:1)
        • Desulfurivibrio (isolates:3; rSTs:2)
          • Desulfurivibrio alkaliphilus (isolates:2; rSTs:1)
          • Desulfurivibrio sp. (isolates:1; rSTs:1)
      • Desulfocapsaceae (isolates:9; rSTs:9 tree)
        • Desulfocapsa (isolates:1; rSTs:1)
          • Desulfocapsa sulfexigens (isolates:1; rSTs:1)
        • Desulfofustis (isolates:2; rSTs:2)
          • Desulfofustis glycolicus (isolates:1; rSTs:1)
          • Desulfofustis limnaeus (isolates:1; rSTs:1)
        • Desulfopila (isolates:1; rSTs:1)
          • Desulfopila aestuarii (isolates:1; rSTs:1)
        • Desulforhopalus (isolates:2; rSTs:2)
          • Desulforhopalus singaporensis (isolates:1; rSTs:1)
          • Desulforhopalus vacuolatus (isolates:1; rSTs:1)
        • Desulfosediminicola (isolates:2; rSTs:2)
          • Desulfosediminicola flagellatus (isolates:1; rSTs:1)
          • Desulfosediminicola ganghwensis (isolates:1; rSTs:1)
        • Desulfotalea (isolates:1; rSTs:1)
          • Desulfotalea psychrophila (isolates:1; rSTs:1)
      • Thiovibrionaceae (isolates:1; rSTs:1)
        • Thiovibrio (isolates:1; rSTs:1)
          • Thiovibrio frasassiensis (isolates:1; rSTs:1)
  • Desulfomonilia (isolates:1; rSTs:1)
    • Desulfomonilales (isolates:1; rSTs:1)
      • Desulfomonilaceae (isolates:1; rSTs:1)
        • Desulfomonile (isolates:1; rSTs:1)
          • Desulfomonile tiedjei (isolates:1; rSTs:1)
  • Desulfovibrionia (isolates:184; rSTs:153 tree)
    • Desulfovibrionales (isolates:184; rSTs:153 tree)
      • Desulfohalobiaceae (isolates:2; rSTs:2)
        • Desulfohalobium (isolates:1; rSTs:1)
          • Desulfohalobium retbaense (isolates:1; rSTs:1)
        • Desulfovermiculus (isolates:1; rSTs:1)
          • Desulfovermiculus halophilus (isolates:1; rSTs:1)
      • Desulfomicrobiaceae (isolates:7; rSTs:7 tree)
        • Desulfomicrobium (isolates:7; rSTs:7 tree)
          • Desulfomicrobium apsheronum (isolates:1; rSTs:1)
          • Desulfomicrobium baculatum (isolates:1; rSTs:1)
          • Desulfomicrobium escambiense (isolates:1; rSTs:1)
          • Desulfomicrobium macestii (isolates:1; rSTs:1)
          • Desulfomicrobium norvegicum (isolates:1; rSTs:1)
          • Desulfomicrobium orale (isolates:1; rSTs:1)
          • Desulfomicrobium sp. (isolates:1; rSTs:1)
      • Desulfonatronaceae (isolates:5; rSTs:5 tree)
        • Desulfonatronum (isolates:5; rSTs:5 tree)
          • Desulfonatronum lacustre (isolates:1; rSTs:1)
          • Desulfonatronum sp. (isolates:1; rSTs:1)
          • Desulfonatronum thioautotrophicum (isolates:1; rSTs:1)
          • Desulfonatronum thiodismutans (isolates:1; rSTs:1)
          • Desulfonatronum thiosulfatophilum (isolates:1; rSTs:1)
      • Desulfonatronovibrionaceae (isolates:4; rSTs:3 tree)
        • Desulfonatronospira (isolates:1; rSTs:1)
          • Desulfonatronospira thiodismutans (isolates:1; rSTs:1)
        • Desulfonatronovibrio (isolates:3; rSTs:2)
          • Desulfonatronovibrio hydrogenovorans (isolates:2; rSTs:1)
          • Desulfonatronovibrio magnus (isolates:1; rSTs:1)
      • Desulfonauticaceae (isolates:2; rSTs:2)
        • Desulfonauticus (isolates:1; rSTs:1)
          • Desulfonauticus submarinus (isolates:1; rSTs:1)
        • Desulfovulcanus (isolates:1; rSTs:1)
          • Desulfovulcanus ferrireducens (isolates:1; rSTs:1)
      • Desulfoplanaceae (isolates:1; rSTs:1)
        • Desulfoplanes (isolates:1; rSTs:1)
          • Desulfoplanes formicivorans (isolates:1; rSTs:1)
      • Desulfothermaceae (isolates:1)
        • Desulfothermus (isolates:1)
          • Desulfothermus okinawensis (isolates:1)
      • Desulfovibrionaceae (isolates:162; rSTs:133 tree)
        • Alkalidesulfovibrio (isolates:1; rSTs:1)
          • Alkalidesulfovibrio alkalitolerans (isolates:1; rSTs:1)
        • Bilophila (isolates:12; rSTs:8 tree)
          • Bilophila sp. (isolates:1; rSTs:1)
          • Bilophila wadsworthia (isolates:11; rSTs:7 tree)
        • Desulfobaculum (isolates:3; rSTs:3 tree)
          • Desulfobaculum bizertense (isolates:2; rSTs:2)
          • Desulfobaculum xiamenense (isolates:1; rSTs:1)
        • Desulfocurvibacter (isolates:4; rSTs:4 tree)
          • Desulfocurvibacter africanus (isolates:4; rSTs:4 tree)
        • Desulfocurvus (isolates:1; rSTs:1)
          • Desulfocurvus vexinensis (isolates:1; rSTs:1)
        • Desulfohalovibrio (isolates:1; rSTs:1)
          • Desulfohalovibrio reitneri (isolates:1; rSTs:1)
        • Desulfolutivibrio (isolates:4; rSTs:3 tree)
          • Desulfolutivibrio sulfodismutans (isolates:2; rSTs:1)
          • Desulfolutivibrio sulfoxidireducens (isolates:2; rSTs:2)
        • Desulfovibrio (isolates:57; rSTs:46 tree)
          • Candidatus Desulfovibrio trichonymphae (isolates:1; rSTs:1)
          • Desulfovibrio aminophilus (isolates:2; rSTs:2)
          • Desulfovibrio cuneatus (isolates:1; rSTs:1)
          • Desulfovibrio desulfuricans (isolates:13; rSTs:8 tree)
          • Desulfovibrio fairfieldensis (isolates:1; rSTs:1)
          • Desulfovibrio ferrophilus (isolates:1; rSTs:1)
          • Desulfovibrio gilichinskyi (isolates:1; rSTs:1)
          • Desulfovibrio inopinatus (isolates:1; rSTs:1)
          • Desulfovibrio intestinalis (isolates:1; rSTs:1)
          • Desulfovibrio legallii (isolates:3; rSTs:3 tree)
          • Desulfovibrio litoralis (isolates:1; rSTs:1)
          • Desulfovibrio mangrovi (isolates:1; rSTs:1)
          • Desulfovibrio oxyclinae (isolates:1; rSTs:1)
          • Desulfovibrio piger (isolates:9; rSTs:7 tree)
          • Desulfovibrio porci (isolates:1; rSTs:1)
          • Desulfovibrio psychrotolerans (isolates:1; rSTs:1)
          • Desulfovibrio sp. (isolates:16; rSTs:12 tree)
          • Desulfovibrio subterraneus (isolates:2; rSTs:2)
        • Fundidesulfovibrio (isolates:5; rSTs:4 tree)
          • Fundidesulfovibrio agrisoli (isolates:1; rSTs:1)
          • Fundidesulfovibrio magnetotacticus (isolates:1; rSTs:1)
          • Fundidesulfovibrio putealis (isolates:1; rSTs:1)
          • Fundidesulfovibrio soli (isolates:1; rSTs:1)
          • Fundidesulfovibrio terrae (isolates:1)
        • Halodesulfovibrio (isolates:5; rSTs:5 tree)
          • Halodesulfovibrio aestuarii (isolates:2; rSTs:2)
          • Halodesulfovibrio marinisediminis (isolates:1; rSTs:1)
          • Halodesulfovibrio sp. (isolates:1; rSTs:1)
          • Halodesulfovibrio spirochaetisodalis (isolates:1; rSTs:1)
        • Humidesulfovibrio (isolates:1; rSTs:1)
          • Humidesulfovibrio mexicanus (isolates:1; rSTs:1)
        • Lawsonia (isolates:9; rSTs:5 tree)
          • Lawsonia intracellularis (isolates:9; rSTs:5 tree)
        • Mailhella (isolates:1; rSTs:1)
          • Mailhella massiliensis (isolates:1; rSTs:1)
        • Maridesulfovibrio (isolates:7; rSTs:6 tree)
          • Maridesulfovibrio bastinii (isolates:1; rSTs:1)
          • Maridesulfovibrio ferrireducens (isolates:1; rSTs:1)
          • Maridesulfovibrio frigidus (isolates:1; rSTs:1)
          • Maridesulfovibrio hydrothermalis (isolates:2; rSTs:1)
          • Maridesulfovibrio salexigens (isolates:1; rSTs:1)
          • Maridesulfovibrio zosterae (isolates:1; rSTs:1)
        • Megalodesulfovibrio (isolates:2; rSTs:1)
          • Megalodesulfovibrio gigas (isolates:2; rSTs:1)
        • Nitratidesulfovibrio (isolates:12; rSTs:10 tree)
          • Nitratidesulfovibrio liaohensis (isolates:2; rSTs:2)
          • Nitratidesulfovibrio oxamicus (isolates:1; rSTs:1)
          • Nitratidesulfovibrio sp. (isolates:3; rSTs:2)
          • Nitratidesulfovibrio termitidis (isolates:1; rSTs:1)
          • Nitratidesulfovibrio vulgaris (isolates:5; rSTs:4 tree)
        • Oceanidesulfovibrio (isolates:3; rSTs:2)
          • Oceanidesulfovibrio indonesiensis (isolates:1)
          • Oceanidesulfovibrio marinus (isolates:2; rSTs:2)
        • Oleidesulfovibrio (isolates:2; rSTs:2)
          • Oleidesulfovibrio alaskensis (isolates:2; rSTs:2)
        • Paucidesulfovibrio (isolates:2; rSTs:2)
          • Paucidesulfovibrio gracilis (isolates:1; rSTs:1)
          • Paucidesulfovibrio longus (isolates:1; rSTs:1)
        • Pseudodesulfovibrio (isolates:21; rSTs:18 tree)
          • Pseudodesulfovibrio aespoeensis (isolates:1; rSTs:1)
          • Pseudodesulfovibrio alkaliphilus (isolates:1; rSTs:1)
          • Pseudodesulfovibrio cashew (isolates:1; rSTs:1)
          • Pseudodesulfovibrio hydrargyri (isolates:1; rSTs:1)
          • Pseudodesulfovibrio indicus (isolates:2; rSTs:1)
          • Pseudodesulfovibrio mercurii (isolates:1; rSTs:1)
          • Pseudodesulfovibrio nedwellii (isolates:1; rSTs:1)
          • Pseudodesulfovibrio pelocollis (isolates:1; rSTs:1)
          • Pseudodesulfovibrio piezophilus (isolates:1; rSTs:1)
          • Pseudodesulfovibrio portus (isolates:1; rSTs:1)
          • Pseudodesulfovibrio profundus (isolates:1; rSTs:1)
          • Pseudodesulfovibrio sediminis (isolates:1; rSTs:1)
          • Pseudodesulfovibrio senegalensis (isolates:1; rSTs:1)
          • Pseudodesulfovibrio sp. (isolates:5; rSTs:3 tree)
          • Pseudodesulfovibrio thermohalotolerans (isolates:1; rSTs:1)
          • Pseudodesulfovibrio tunisiensis (isolates:1; rSTs:1)
        • Salidesulfovibrio (isolates:2; rSTs:2)
          • Salidesulfovibrio brasiliensis (isolates:1; rSTs:1)
          • Salidesulfovibrio onnuriiensis (isolates:1; rSTs:1)
        • Solidesulfovibrio (isolates:7; rSTs:7 tree)
          • Solidesulfovibrio aerotolerans (isolates:1; rSTs:1)
          • Solidesulfovibrio alcoholivorans (isolates:1; rSTs:1)
          • Solidesulfovibrio carbinolicus (isolates:1; rSTs:1)
          • Solidesulfovibrio carbinoliphilus (isolates:1; rSTs:1)
          • Solidesulfovibrio fructosivorans (isolates:1; rSTs:1)
          • Solidesulfovibrio magneticus (isolates:2; rSTs:2)
  • Desulfuromonadia (isolates:89; rSTs:78 tree)
    • Desulfuromonadales (isolates:30; rSTs:23 tree)
      • Desulfuromonadaceae (isolates:15; rSTs:10 tree)
        • Desulfuromonas (isolates:13; rSTs:8 tree)
          • Desulfuromonas acetexigens (isolates:2; rSTs:1)
          • Desulfuromonas acetoxidans (isolates:4; rSTs:1)
          • Desulfuromonas soudanensis (isolates:1; rSTs:1)
          • Desulfuromonas sp. (isolates:4; rSTs:3 tree)
          • Desulfuromonas thiophila (isolates:1; rSTs:1)
          • Desulfuromonas versatilis (isolates:1; rSTs:1)
        • Pelobacter (isolates:2; rSTs:2)
          • Pelobacter propionicus (isolates:1; rSTs:1)
          • Pelobacter seleniigenes (isolates:1; rSTs:1)
      • Geoalkalibacteraceae (isolates:5; rSTs:3 tree)
        • Geoalkalibacter (isolates:5; rSTs:3 tree)
          • Geoalkalibacter ferrihydriticus (isolates:2; rSTs:1)
          • Geoalkalibacter halelectricus (isolates:2; rSTs:1)
          • Geoalkalibacter subterraneus (isolates:1; rSTs:1)
      • Geopsychrobacteraceae (isolates:3; rSTs:3 tree)
        • Desulfuromusa (isolates:1; rSTs:1)
          • Desulfuromusa kysingii (isolates:1; rSTs:1)
        • Geopsychrobacter (isolates:1; rSTs:1)
          • Geopsychrobacter electrodiphilus (isolates:1; rSTs:1)
        • Malonomonas (isolates:1; rSTs:1)
          • Malonomonas rubra (isolates:1; rSTs:1)
      • Geothermobacteraceae (isolates:3; rSTs:3 tree)
        • Geothermobacter (isolates:3; rSTs:3 tree)
          • Geothermobacter ehrlichii (isolates:1; rSTs:1)
          • Geothermobacter hydrogeniphilus (isolates:2; rSTs:2)
      • Syntrophotaleaceae (isolates:4; rSTs:4 tree)
        • Syntrophotalea (isolates:4; rSTs:4 tree)
          • Syntrophotalea acetylenica (isolates:2; rSTs:2)
          • Syntrophotalea acetylenivorans (isolates:1; rSTs:1)
          • Syntrophotalea carbinolica (isolates:1; rSTs:1)
    • Geobacterales (isolates:59; rSTs:55 tree)
      • Geobacteraceae (isolates:59; rSTs:55 tree)
        • Citrifermentans (isolates:3; rSTs:3 tree)
          • Citrifermentans bemidjiense (isolates:1; rSTs:1)
          • Citrifermentans bremense (isolates:2; rSTs:2)
        • Geoanaerobacter (isolates:1; rSTs:1)
          • Geoanaerobacter pelophilus (isolates:1; rSTs:1)
        • Geobacter (isolates:19; rSTs:17 tree)
          • Geobacter anodireducens (isolates:1; rSTs:1)
          • Geobacter argillaceus (isolates:1; rSTs:1)
          • Geobacter benzoatilyticus (isolates:1; rSTs:1)
          • Geobacter grbiciae (isolates:1; rSTs:1)
          • Geobacter hydrogenophilus (isolates:2; rSTs:1)
          • Geobacter metallireducens (isolates:2; rSTs:2)
          • Geobacter pickeringii (isolates:1; rSTs:1)
          • Geobacter soli (isolates:1; rSTs:1)
          • Geobacter sp. (isolates:1; rSTs:1)
          • Geobacter sulfurreducens (isolates:8; rSTs:7 tree)
        • Geomesophilobacter (isolates:1; rSTs:1)
          • Geomesophilobacter sediminis (isolates:1; rSTs:1)
        • Geomobilimonas (isolates:1; rSTs:1)
          • Geomobilimonas luticola (isolates:1; rSTs:1)
        • Geomonas (isolates:21; rSTs:19 tree)
          • Geomonas agri (isolates:1; rSTs:1)
          • Geomonas anaerohicana (isolates:1; rSTs:1)
          • Geomonas azotofigens (isolates:1; rSTs:1)
          • Geomonas diazotrophica (isolates:1; rSTs:1)
          • Geomonas edaphica (isolates:1; rSTs:1)
          • Geomonas ferrireducens (isolates:1; rSTs:1)
          • Geomonas fuzhouensis (isolates:1; rSTs:1)
          • Geomonas limicola (isolates:1; rSTs:1)
          • Geomonas nitrogeniifigens (isolates:2; rSTs:2)
          • Geomonas oryzae (isolates:1; rSTs:1)
          • Geomonas oryzisoli (isolates:1; rSTs:1)
          • Geomonas paludis (isolates:2; rSTs:2)
          • Geomonas propionica (isolates:1; rSTs:1)
          • Geomonas silvestris (isolates:1; rSTs:1)
          • Geomonas sp. (isolates:2; rSTs:2)
          • Geomonas subterranea (isolates:2; rSTs:1)
          • Geomonas terrae (isolates:1)
        • Geotalea (isolates:4; rSTs:4 tree)
          • Geotalea daltonii (isolates:1; rSTs:1)
          • Geotalea sp. (isolates:1; rSTs:1)
          • Geotalea toluenoxydans (isolates:1; rSTs:1)
          • Geotalea uraniireducens (isolates:1; rSTs:1)
        • Oryzomonas (isolates:3; rSTs:3 tree)
          • Oryzomonas japonica (isolates:1; rSTs:1)
          • Oryzomonas rubra (isolates:1; rSTs:1)
          • Oryzomonas sagensis (isolates:1; rSTs:1)
        • Pelotalea (isolates:1; rSTs:1)
          • Pelotalea chapellei (isolates:1; rSTs:1)
        • Pelovirga (isolates:1; rSTs:1)
          • Pelovirga terrestris (isolates:1; rSTs:1)
        • Trichlorobacter (isolates:4; rSTs:4 tree)
          • Trichlorobacter ammonificans (isolates:1; rSTs:1)
          • Trichlorobacter lovleyi (isolates:2; rSTs:2)
          • Trichlorobacter thiogenes (isolates:1; rSTs:1)
  • Dissulfuribacteria (isolates:1; rSTs:1)
    • Dissulfuribacterales (isolates:1; rSTs:1)
      • Dissulfuribacteraceae (isolates:1; rSTs:1)
        • Dissulfuribacter (isolates:1; rSTs:1)
          • Dissulfuribacter thermophilus (isolates:1; rSTs:1)
  • Syntrophia (isolates:7; rSTs:3 tree)
    • Syntrophales (isolates:7; rSTs:3 tree)
      • Smithellaceae (isolates:5; rSTs:1)
        • Smithella (isolates:5; rSTs:1)
          • Smithella sp. (isolates:5; rSTs:1)
      • Syntrophaceae (isolates:2; rSTs:2)
        • Syntrophus (isolates:2; rSTs:2)
          • Syntrophus aciditrophicus (isolates:1; rSTs:1)
          • Syntrophus gentianae (isolates:1; rSTs:1)
  • Syntrophobacteria (isolates:9; rSTs:9 tree)
    • Syntrophobacterales (isolates:9; rSTs:9 tree)
      • Syntrophobacteraceae (isolates:8; rSTs:8 tree)
        • Desulfacinum (isolates:2; rSTs:2)
          • Desulfacinum hydrothermale (isolates:1; rSTs:1)
          • Desulfacinum infernum (isolates:1; rSTs:1)
        • Desulfoferrobacter (isolates:1; rSTs:1)
          • Desulfoferrobacter suflitae (isolates:1; rSTs:1)
        • Desulfoglaeba (isolates:1; rSTs:1)
          • Desulfoglaeba alkanexedens (isolates:1; rSTs:1)
        • Desulforhabdus (isolates:2; rSTs:2)
          • Desulforhabdus amnigena (isolates:1; rSTs:1)
          • Desulforhabdus sp. (isolates:1; rSTs:1)
        • Desulfosoma (isolates:1; rSTs:1)
          • Desulfosoma caldarium (isolates:1; rSTs:1)
        • Syntrophobacter (isolates:1; rSTs:1)
          • Syntrophobacter fumaroxidans (isolates:1; rSTs:1)
      • Thermodesulforhabdaceae (isolates:1; rSTs:1)
        • Thermodesulforhabdus (isolates:1; rSTs:1)
          • Thermodesulforhabdus norvegica (isolates:1; rSTs:1)
  • Syntrophorhabdia (isolates:1; rSTs:1)
    • Syntrophorhabdales (isolates:1; rSTs:1)
      • Syntrophorhabdaceae (isolates:1; rSTs:1)
        • Syntrophorhabdus (isolates:1; rSTs:1)
          • Syntrophorhabdus aromaticivorans (isolates:1; rSTs:1)
  • Thermodesulfobacteria (isolates:20; rSTs:14 tree)
    • Thermodesulfobacteriales (isolates:20; rSTs:14 tree)
      • Thermodesulfatatoraceae (isolates:4; rSTs:3 tree)
        • Thermodesulfatator (isolates:4; rSTs:3 tree)
          • Thermodesulfatator atlanticus (isolates:1; rSTs:1)
          • Thermodesulfatator autotrophicus (isolates:1; rSTs:1)
          • Thermodesulfatator indicus (isolates:2; rSTs:1)
      • Thermodesulfobacteriaceae (isolates:16; rSTs:11 tree)
        • Caldimicrobium (isolates:1; rSTs:1)
          • Caldimicrobium thiodismutans (isolates:1; rSTs:1)
        • Thermodesulfobacterium (isolates:10; rSTs:6 tree)
          • Thermodesulfobacterium commune (isolates:4; rSTs:1)
          • Thermodesulfobacterium geofontis (isolates:1; rSTs:1)
          • Thermodesulfobacterium hveragerdense (isolates:1; rSTs:1)
          • Thermodesulfobacterium hydrogeniphilum (isolates:1; rSTs:1)
          • Thermodesulfobacterium sp. (isolates:2; rSTs:1)
          • Thermodesulfobacterium thermophilum (isolates:1; rSTs:1)
        • Thermosulfurimonas (isolates:3; rSTs:3 tree)
          • Thermosulfurimonas dismutans (isolates:1; rSTs:1)
          • Thermosulfurimonas marina (isolates:1; rSTs:1)
          • Thermosulfurimonas sp. (isolates:1; rSTs:1)
        • Thermosulfuriphilus (isolates:2; rSTs:1)
          • Thermosulfuriphilus ammonigenes (isolates:2; rSTs:1)
• Thermodesulfobiota (isolates:3; rSTs:2)
  • Thermodesulfobiia (isolates:3; rSTs:2)
    • Thermodesulfobiales (isolates:3; rSTs:2)
      • Thermodesulfobiaceae (isolates:3; rSTs:2)
        • Thermodesulfobium (isolates:3; rSTs:2)
          • Thermodesulfobium acidiphilum (isolates:1; rSTs:1)
          • Thermodesulfobium narugense (isolates:1; rSTs:1)
          • Thermodesulfobium sp. (isolates:1)
• Thermomicrobiota (isolates:6; rSTs:4 tree)
  • Thermomicrobia (isolates:6; rSTs:4 tree)
    • Sphaerobacterales (isolates:2; rSTs:1)
      • Sphaerobacteraceae (isolates:2; rSTs:1)
        • Sphaerobacter (isolates:2; rSTs:1)
          • Sphaerobacter thermophilus (isolates:2; rSTs:1)
    • Thermomicrobiales (isolates:3; rSTs:2)
      • Thermomicrobiaceae (isolates:3; rSTs:2)
        • Thermomicrobium (isolates:3; rSTs:2)
          • Thermomicrobium roseum (isolates:1; rSTs:1)
          • Thermomicrobium sp. (isolates:2; rSTs:1)
• Thermosulfidibacterota (isolates:1; rSTs:1)
  • Thermosulfidibacteria (isolates:1; rSTs:1)
    • Thermosulfidibacterales (isolates:1; rSTs:1)
      • Thermosulfidibacteraceae (isolates:1; rSTs:1)
        • Thermosulfidibacter (isolates:1; rSTs:1)
          • Thermosulfidibacter takaii (isolates:1; rSTs:1)
• Thermotogota (isolates:117; rSTs:89 tree)
  • Thermotogae (isolates:117; rSTs:89 tree)
    • Kosmotogales (isolates:16; rSTs:13 tree)
      • Kosmotogaceae (isolates:16; rSTs:13 tree)
        • Kosmotoga (isolates:4; rSTs:4 tree)
          • Kosmotoga arenicorallina (isolates:1; rSTs:1)
          • Kosmotoga olearia (isolates:1; rSTs:1)
          • Kosmotoga pacifica (isolates:1; rSTs:1)
          • Kosmotoga sp. (isolates:1; rSTs:1)
        • Mesotoga (isolates:12; rSTs:9 tree)
          • Mesotoga infera (isolates:1; rSTs:1)
          • Mesotoga prima (isolates:1; rSTs:1)
          • Mesotoga sp. (isolates:10; rSTs:7 tree)
    • Mesoaciditogales (isolates:2; rSTs:2)
      • Mesoaciditogaceae (isolates:2; rSTs:2)
        • Athalassotoga (isolates:1; rSTs:1)
          • Athalassotoga saccharophila (isolates:1; rSTs:1)
        • Mesoaciditoga (isolates:1; rSTs:1)
          • Mesoaciditoga lauensis (isolates:1; rSTs:1)
    • Petrotogales (isolates:34; rSTs:29 tree)
      • Petrotogaceae (isolates:34; rSTs:29 tree)
        • Defluviitoga (isolates:1; rSTs:1)
          • Defluviitoga tunisiensis (isolates:1; rSTs:1)
        • Geotoga (isolates:3; rSTs:2)
          • Geotoga petraea (isolates:3; rSTs:2)
        • Marinitoga (isolates:12; rSTs:12 tree)
          • Marinitoga aeolica (isolates:1; rSTs:1)
          • Marinitoga hydrogenitolerans (isolates:1; rSTs:1)
          • Marinitoga lauensis (isolates:1; rSTs:1)
          • Marinitoga litoralis (isolates:1; rSTs:1)
          • Marinitoga piezophila (isolates:1; rSTs:1)
          • Marinitoga sp. (isolates:7; rSTs:7 tree)
        • Oceanotoga (isolates:1; rSTs:1)
          • Oceanotoga sp. (isolates:1; rSTs:1)
        • Petrotoga (isolates:16; rSTs:12 tree)
          • Petrotoga halophila (isolates:1; rSTs:1)
          • Petrotoga mexicana (isolates:1; rSTs:1)
          • Petrotoga miotherma (isolates:1; rSTs:1)
          • Petrotoga mobilis (isolates:1; rSTs:1)
          • Petrotoga olearia (isolates:2; rSTs:1)
          • Petrotoga sibirica (isolates:2; rSTs:1)
          • Petrotoga sp. (isolates:8; rSTs:6 tree)
        • Tepiditoga (isolates:1; rSTs:1)
          • Tepiditoga spiralis (isolates:1; rSTs:1)
    • Thermotogales (isolates:65; rSTs:45 tree)
      • Fervidobacteriaceae (isolates:30; rSTs:23 tree)
        • Fervidobacterium (isolates:10; rSTs:9 tree)
          • Fervidobacterium changbaicum (isolates:2; rSTs:1)
          • Fervidobacterium gondwanense (isolates:1; rSTs:1)
          • Fervidobacterium islandicum (isolates:1; rSTs:1)
          • Fervidobacterium nodosum (isolates:1; rSTs:1)
          • Fervidobacterium pennivorans (isolates:3; rSTs:3 tree)
          • Fervidobacterium sp. (isolates:1; rSTs:1)
          • Fervidobacterium thailandense (isolates:1; rSTs:1)
        • Thermosipho (isolates:20; rSTs:14 tree)
          • Thermosipho affectus (isolates:1; rSTs:1)
          • Thermosipho africanus (isolates:3; rSTs:3 tree)
          • Thermosipho atlanticus (isolates:1; rSTs:1)
          • Thermosipho ferrireducens (isolates:1; rSTs:1)
          • Thermosipho globiformans (isolates:1; rSTs:1)
          • Thermosipho japonicus (isolates:1; rSTs:1)
          • Thermosipho melanesiensis (isolates:7; rSTs:1)
          • Thermosipho sp. (isolates:5; rSTs:5 tree)
      • Thermotogaceae (isolates:35; rSTs:22 tree)
        • Pseudothermotoga (isolates:8; rSTs:4 tree)
          • Pseudothermotoga elfii (isolates:2; rSTs:1)
          • Pseudothermotoga hypogea (isolates:3; rSTs:1)
          • Pseudothermotoga lettingae (isolates:2; rSTs:1)
          • Pseudothermotoga thermarum (isolates:1; rSTs:1)
        • Thermotoga (isolates:27; rSTs:18 tree)
          • Thermotoga caldifontis (isolates:1; rSTs:1)
          • Thermotoga maritima (isolates:6; rSTs:2)
          • Thermotoga naphthophila (isolates:1; rSTs:1)
          • Thermotoga neapolitana (isolates:2; rSTs:1)
          • Thermotoga petrophila (isolates:1; rSTs:1)
          • Thermotoga profunda (isolates:1; rSTs:1)
          • Thermotoga sp. (isolates:15; rSTs:11 tree)
• Verrucomicrobiota (isolates:423; rSTs:202 tree)
  • Methylacidiphilae (isolates:15; rSTs:8 tree)
    • Methylacidiphilales (isolates:15; rSTs:8 tree)
      • Methylacidiphilaceae (isolates:15; rSTs:8 tree)
        • Candidatus Methylacidithermus (isolates:1)
          • Candidatus Methylacidithermus pantelleriae (isolates:1)
        • Methylacidiphilum (ex Ratnadevi et al. 2023) (isolates:14; rSTs:8 tree)
          • Candidatus Methylacidiphilum fumarolicum (isolates:8; rSTs:2)
          • Candidatus Methylacidiphilum infernorum (isolates:1; rSTs:1)
          • Methylacidiphilum caldifontis (isolates:1; rSTs:1)
          • Methylacidiphilum infernorum (isolates:1; rSTs:1)
          • Methylacidiphilum kamchatkense (isolates:2; rSTs:2)
          • Methylacidiphilum sp. (isolates:1; rSTs:1)
  • Opitutia (isolates:45; rSTs:35 tree)
    • Opitutales (isolates:17; rSTs:14 tree)
      • Opitutaceae (isolates:17; rSTs:14 tree)
        • Actomonas (isolates:1; rSTs:1)
          • Actomonas aquatica (isolates:1; rSTs:1)
        • Candidatus Didemnitutus (isolates:1; rSTs:1)
          • Candidatus Didemnitutus mandela (isolates:1; rSTs:1)
        • Cephaloticoccus (isolates:2; rSTs:2)
          • Cephaloticoccus capnophilus (isolates:1; rSTs:1)
          • Cephaloticoccus primus (isolates:1; rSTs:1)
        • Ereboglobus (isolates:3; rSTs:3 tree)
          • Ereboglobus luteus (isolates:1; rSTs:1)
          • Ereboglobus sp. (isolates:2; rSTs:2)
        • Geminisphaera (isolates:1)
          • Geminisphaera colitermitum (isolates:1)
        • Horticoccus (isolates:1; rSTs:1)
          • Horticoccus luteus (isolates:1; rSTs:1)
        • Lacunisphaera (isolates:1; rSTs:1)
          • Lacunisphaera limnophila (isolates:1; rSTs:1)
        • Nibricoccus (isolates:1; rSTs:1)
          • Nibricoccus aquaticus (isolates:1; rSTs:1)
        • Oleiharenicola (isolates:1; rSTs:1)
          • Oleiharenicola lentus (isolates:1; rSTs:1)
        • Opitutus (isolates:1; rSTs:1)
          • Opitutus terrae (isolates:1; rSTs:1)
        • Rariglobus (isolates:1; rSTs:1)
          • Rariglobus hedericola (isolates:1; rSTs:1)
        • Synoicihabitans (isolates:1; rSTs:1)
          • Synoicihabitans lomoniglobus (isolates:1; rSTs:1)
        • Termitidicoccus (isolates:2)
          • Termitidicoccus mucosus (isolates:2)
    • Puniceicoccales (isolates:28; rSTs:21 tree)
      • Cerasicoccaceae (isolates:8; rSTs:6 tree)
        • Cerasicoccus (isolates:5; rSTs:4 tree)
          • Cerasicoccus arenae (isolates:2; rSTs:1)
          • Cerasicoccus frondis (isolates:1; rSTs:1)
          • Cerasicoccus maritimus (isolates:1; rSTs:1)
          • Cerasicoccus sp. (isolates:1; rSTs:1)
        • Rubellicoccus (isolates:1)
          • Rubellicoccus peritrichatus (isolates:1)
        • Ruficoccus (isolates:2; rSTs:2)
          • Ruficoccus amylovorans (isolates:1; rSTs:1)
          • Ruficoccus sp. (isolates:1; rSTs:1)
      • Coraliomargaritaceae (isolates:8; rSTs:6 tree)
        • Coraliomargarita (isolates:8; rSTs:6 tree)
          • Coraliomargarita akajimensis (isolates:3; rSTs:1)
          • Coraliomargarita algicola (isolates:1; rSTs:1)
          • Coraliomargarita parva (isolates:1; rSTs:1)
          • Coraliomargarita sinensis (isolates:1; rSTs:1)
          • Coraliomargarita sp. (isolates:2; rSTs:2)
      • Oceanipulchritudinaceae (isolates:1; rSTs:1)
        • Oceanipulchritudo (isolates:1; rSTs:1)
          • Oceanipulchritudo coccoides (isolates:1; rSTs:1)
      • Pelagicoccaceae (isolates:8; rSTs:7 tree)
        • Pelagicoccus (isolates:8; rSTs:7 tree)
          • Pelagicoccus albus (isolates:2; rSTs:1)
          • Pelagicoccus enzymogenes (isolates:2; rSTs:2)
          • Pelagicoccus mobilis (isolates:1; rSTs:1)
          • Pelagicoccus sp. (isolates:3; rSTs:3 tree)
      • Puniceicoccaceae (isolates:2; rSTs:1)
        • Puniceicoccus (isolates:2; rSTs:1)
          • Puniceicoccus vermicola (isolates:2; rSTs:1)
  • Spartobacteria (isolates:3; rSTs:2)
    • Chthoniobacterales (isolates:2; rSTs:1)
      • Chthoniobacteraceae (isolates:2; rSTs:1)
        • Chthoniobacter (isolates:2; rSTs:1)
          • Chthoniobacter flavus (isolates:2; rSTs:1)
  • Terrimicrobiia (isolates:1; rSTs:1)
    • Terrimicrobiales (isolates:1; rSTs:1)
      • Terrimicrobiaceae (isolates:1; rSTs:1)
        • Terrimicrobium (isolates:1; rSTs:1)
          • Terrimicrobium sacchariphilum (isolates:1; rSTs:1)
  • Verrucomicrobiia (isolates:346; rSTs:150 tree)
    • Limisphaerales (isolates:3; rSTs:3 tree)
      • Fontisphaeraceae (isolates:1; rSTs:1)
        • Fontisphaera (isolates:1; rSTs:1)
          • Fontisphaera persica (isolates:1; rSTs:1)
      • Limisphaeraceae (isolates:1; rSTs:1)
        • Limisphaera (isolates:1; rSTs:1)
          • Limisphaera ngatamarikiensis (isolates:1; rSTs:1)
    • Verrucomicrobiales (isolates:343; rSTs:147 tree)
      • Akkermansiaceae (isolates:300; rSTs:107 tree)
        • Akkermansia (isolates:300; rSTs:107 tree)
          • Akkermansia biwaensis (isolates:1; rSTs:1)
          • Akkermansia glycaniphila (isolates:3; rSTs:2)
          • Akkermansia massiliensis (isolates:13; rSTs:7 tree)
          • Akkermansia muciniphila (isolates:206; rSTs:75 tree)
          • Akkermansia sp. (isolates:77; rSTs:22 tree)
      • Rubritaleaceae (isolates:4; rSTs:4 tree)
        • Rubritalea (isolates:4; rSTs:4 tree)
          • Rubritalea halochordaticola (isolates:1; rSTs:1)
          • Rubritalea marina (isolates:1; rSTs:1)
          • Rubritalea profundi (isolates:1; rSTs:1)
          • Rubritalea squalenifaciens (isolates:1; rSTs:1)
      • Verrucomicrobiaceae (isolates:39; rSTs:36 tree)
        • Brevifollis (isolates:1; rSTs:1)
          • Brevifollis gellanilyticus (isolates:1; rSTs:1)
        • Haloferula (isolates:5; rSTs:4 tree)
          • Haloferula helveola (isolates:2; rSTs:1)
          • Haloferula luteola (isolates:1; rSTs:1)
          • Haloferula rosea (isolates:1; rSTs:1)
          • Haloferula sargassicola (isolates:1; rSTs:1)
        • Luteolibacter (isolates:12; rSTs:11 tree)
          • Luteolibacter ambystomatis (isolates:1; rSTs:1)
          • Luteolibacter arcticus (isolates:1; rSTs:1)
          • Luteolibacter flavescens (isolates:1; rSTs:1)
          • Luteolibacter luteus (isolates:1; rSTs:1)
          • Luteolibacter pohnpeiensis (isolates:1; rSTs:1)
          • Luteolibacter rhizosphaerae (isolates:1; rSTs:1)
          • Luteolibacter sp. (isolates:4; rSTs:4 tree)
          • Luteolibacter yonseiensis (isolates:2; rSTs:1)
        • Oceaniferula (isolates:3; rSTs:2)
          • Oceaniferula flavus (isolates:2; rSTs:1)
          • Oceaniferula marina (isolates:1; rSTs:1)
        • Persicirhabdus (isolates:1; rSTs:1)
          • Persicirhabdus sediminis (isolates:1; rSTs:1)
        • Phragmitibacter (isolates:1; rSTs:1)
          • Phragmitibacter flavus (isolates:1; rSTs:1)
        • Prosthecobacter (isolates:6; rSTs:6 tree)
          • Prosthecobacter algae (isolates:1; rSTs:1)
          • Prosthecobacter debontii (isolates:1; rSTs:1)
          • Prosthecobacter dejongeii (isolates:1; rSTs:1)
          • Prosthecobacter fusiformis (isolates:1; rSTs:1)
          • Prosthecobacter sp. (isolates:1; rSTs:1)
          • Prosthecobacter vanneervenii (isolates:1; rSTs:1)
        • Roseibacillus (isolates:3; rSTs:3 tree)
          • Roseibacillus ishigakijimensis (isolates:1; rSTs:1)
          • Roseibacillus persicicus (isolates:2; rSTs:2)
        • Roseimicrobium (isolates:2; rSTs:2)
          • Roseimicrobium gellanilyticum (isolates:1; rSTs:1)
          • Roseimicrobium sp. (isolates:1; rSTs:1)
        • Sulfuriroseicoccus (isolates:1; rSTs:1)
          • Sulfuriroseicoccus oceanibius (isolates:1; rSTs:1)
        • Verrucomicrobium (isolates:4; rSTs:4 tree)
          • Verrucomicrobium sp. (isolates:2; rSTs:2)
          • Verrucomicrobium spinosum (isolates:2; rSTs:2)
• Vulcanimicrobiota (isolates:1)
  • Vulcanimicrobiia (isolates:1)
    • Vulcanimicrobiales (isolates:1)
      • Vulcanimicrobiaceae (isolates:1)
        • Vulcanimicrobium (isolates:1)
          • Vulcanimicrobium alpinum (isolates:1)