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Staphylococcus pseudintermedius MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

The MLST scheme used in this database is described in Solyman et al. 2013. J Clin Microbiol 51:306-310. Please cite this if you use the scheme.

This MLST scheme was developed by Vincent Perreten and colleagues at the University of Berne, Switzerland.

Database curated by Vincent Perreten.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Staphylococcus pseudintermedius MLST website (https://pubmlst.org/ spseudintermedius/) sited at the University of Oxford (Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved]). The development of this site has been funded by the Wellcome Trust.


Sequence database
Sequences: 430
Profiles (MLST): 1885
Last updated: 2020-07-16

Isolate database
Isolates: 2,147
Last updated: 2020-07-16