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Staphylococcus epidermidis MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

This MLST scheme is described in Thomas et al. 2007. Improved multilocus sequence typing scheme for Staphylococcus epidermidis. J Clin Microbiol 45:616-9.

Database curated by Jonathan Thomas.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Staphylococcus epidermidis MLST website (https://pubmlst.org/ sepidermidis/) sited at the University of Oxford (Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved]). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 487
Profiles (MLST): 991
Last updated: 2020-07-24

Isolate database
Isolates: 1,580
Last updated: 2020-07-24