Skip to main content

User account menu

My Account
PubMLST
Public databases for molecular typing
and microbial genome diversity

Main navigation

  • Home
  • Organisms
  • Species ID
  • About us
  • Updates

  1. Home

  2. Organisms

  3. Staphylococcus aureus

Staphylococcus aureus

Source of isolates submitted to the Staphylococcus aureus database
Submit

This MLST scheme was developed by Mark Enright in the laboratory of Brian Spratt, Imperial College London, in collaboration with the laboratories of Nick Day and Sharon Peacock. It is described in Enright et al. 2000 J Clin Microbiol 38:1008-15.

Database curated by akinyemi.fasemoreatstud-mail.uni-wuerzburg.de (Akinyemi Fasemore).

  • Primers
  • Clonal complexes
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
622,017
Last updated:
2020-10-16

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
35,488
Last updated:
2020-10-16

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:
25,998
Last updated:
2020-10-09

Contact

Get in touch with us if you have any comments or suggestions concerning the website and the databases.

Follow

  • https://twitter.com/pubmlst

Supported by

Wellcome Trust

Footer menu

  • Disclaimer & Privacy
  • Cookies
  • Terms & Conditions

Website by Manta Ray Media