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PubMLST
Public databases for molecular typing
and microbial genome diversity

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Saprolegnia parasitica

Source of isolates submitted to the Saprolegnia parasitica database
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This MLST scheme was developed by Damiana Ravasi and colleagues at the University of Applied Sciences of Southern Switzerland. It is described in Ravasi et al. 2018 J. Fish Dis 41:1653-1665.

Database curated by damiana.ravasiatsupsi.ch (Damiana Ravasi).

  • Primers
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
78
Last updated:
2018-03-26

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
82
Last updated:
2018-03-26

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Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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