Histophilus somni

Source of isolates submitted to the Histophilus somni database

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The Histophilus somni MLST scheme has been developed by Daniël Kos, Andrew Cameron, and colleagues at the University of Regina, Canada.

Database curated by Daniel.Kosuregina.ca (Daniël Kos).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:

Last updated:

2025-05-14

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:

Last updated:

2025-05-15

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:

Last updated:

2025-05-14