Halobacteria spp.

Source of isolates submitted to the Halobacteria spp. database

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The MLST scheme hosted in this database is based on MLSA loci described in Papke et al. 2011 Int J Syst Evol Microbiol 61:2984-2995.

Database curated by kayo.biancofiocruz.br (Kayo Cesar Bianco Fernandes).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:

Last updated:

2024-05-24

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:

Last updated:

2024-05-22