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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Enterococcus faecium

Enterococcus faecium

Source of isolates submitted to the Enterococcus faecium database
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This MLST scheme is described in Homan et al. 2002 J Clin Microbiol 40:1963-71.

Database curated by shakeel.mowlaboccusatuwa.edu.au (Shakeel Mowlaboccus).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
65,541
Last updated:
2021-01-02

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
3,611
Last updated:
2021-01-18

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:
81
Last updated:
2020-11-30

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Wellcome Trust

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