Enterobacter spp.

Source of isolates submitted to the Enterobacter spp. database

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This MLST scheme was developed by takiyamri.ncgm.go.jp (Tohru Miyoshi-Akiyama) and colleagues at the National Center for Global Health and Medicine, Japan. It is described in Miyoshi-Akiyama et al. 2013 PLoS One 8:e66358.

Database curated by keith.jolleybiology.ox.ac.uk (Keith Jolley).

Primers

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.