Cronobacter spp.

Source of isolates submitted to the Cronobacter spp. database

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The MLST scheme hosted in this database was developed by Adam Baldwin (Warwick University, UK) in close collaboration with Stephen Forsythe (Nottingham Trent University, UK). It is described in Baldwin et al. 2009 BMC Microbiol 9:223.

Database curated by steve.forsythefoodmicrobe.com (Stephen Forsythe).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.