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Neisseria PorA typing

The PorA variable region and porA allele databases have been incorporated in to the Neisseria MLST sequence definition database, allowing querying from a unified interface.

Information about the PorA variable regions can be found in Russell et al., Emerg Infect Dis 2004 10:674-8.

Database statistics

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Neisseria Multi Locus Sequence Typing website (https://pubmlst.org/ neisseria/) developed by Keith Jolley and sited at the University of Oxford (Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved]). The development of this site has been funded by the Wellcome Trust and European Union.

The preferred format for citing the MRF Meningococcus Genome Library is here.

Status

Sequence database
Sequences: 1,218,732
Profiles:
MLST: 14,019
rplF species: 165
beta lactamase plasmid: 18
Bexsero Antigen Sequence Typing (BAST): 3,041
Conjugative Plasmid: 242
Cryptic Plasmid: 96
N. gonorrhoeae cgMLST v1.0: 4,887
NG STAR: 831
N. meningitidis cgMLST v1.0: 14,574

Isolate database
Isolates: 47,948
Last updated: 2018-12-17