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Brucella MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

These MLST schemes were developed by Adrian Whatmore and colleagues at the Animal and Plant Health Agency (APHA). The 9 locus scheme is described in Whatmore et al. 2007 BMC Microbiol 7:34. The 21 locus scheme is described in Whatmore et al. 2016 Front Microbiol 7:2049.

Database curated by Adrian Whatmore.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Brucella MLST website (https://pubmlst.org/brucella/) sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 462
Profiles:
MLST (9 locus): 73
MLST (21 locus): 107

Isolate database
Isolates: 756
Last updated: 2017-02-28