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Arcobacter MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

This MLST scheme was developed by Bill Miller.

Please note that these databases will no longer be curated after January 31 2019. If you are interested in taking on the role of curator, please contact Keith Jolley. See a brief overview of the role of a curator for more details.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Arcobacter MLST website (https://pubmlst.org/ arcobacter/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 2,622
Profiles (MLST): 762
Last updated: 2018-11-27

Isolate database
Isolates: 893
Last updated: 2018-06-17