Yersinia ruckeri MLST Databases

This MLST site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

Information
- Primers used for amplification and sequencing
Access main databases
- Sequence/profile definitions database
- Isolates database
Policy document
Submission of data (coming soon)
Submission history

This MLST scheme was developed by Asmine Bastardo and Jesús L. Romalde of the Universidad de Santiago de Compostela, Spain.

Database curated by Asmine Bastardo and Jesús L. Romalde.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Yersinia ruckeri MLST website (http://pubmlst.org/ yruckeri/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 34
Profiles (MLST): 30
Last updated: 2011-07-27

Isolate database
Isolates: 103
Last updated: 2012-10-02