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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Tenacibaculum spp.

Tenacibaculum spp.

Source of isolates submitted to the Tenacibaculum spp. database
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This MLST scheme was developed by Christophe Habib, Eric Duchaud, Pierre Nicolas and colleagues, Infection et Immunité des Poissons. Unité de Virologie et Immunologie Moléculaires, INRA, France.

Database curated by Pierre.Nicolasatjouy.inra.fr (Pierre Nicolas) and eric.duchaudatjouy.inra.fr (Eric Duchaud).

  • Primers
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
551
Last updated:
2024-01-19

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
171
Last updated:
2024-01-31

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:
30
Last updated:
2024-01-30

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Get in touch with us if you have any comments or suggestions concerning the website and the databases.

Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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