Streptococcus uberis

Source of isolates submitted to the Streptococcus uberis database

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This MLST scheme was developed by James Leigh, Tracey Coffey and Gillian Pullinger, Institute for Animal Health, Compton, UK. It is described in Coffey et al. 2006 Appl Environ Microbiol 72:1420-8.The project was funded by BBSRC grant number 201/S15848 - Molecular Epidemiology of Streptococcus uberis.

Database curated by Adam.Blanchardnottingham.ac.uk (Adam Blanchard).

Primers

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.