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Streptococcus pneumoniae MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

Please note we are now using a new submission system - further details.

This database has been migrated from www.mlst.net.

This MLST scheme was originally developed by Mark Enright and colleagues in the laboratory of Brian Spratt.

Database jointly curated by Angela Brueggemann (University of Oxford), William Hanage (Harvard University) and Mark van der Linden (RWTH Aachen University).

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Streptococcus pneumoniae MLST website (http://pubmlst.org/ spneumoniae/) sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 4128
Profiles (MLST): 12999
Last updated: 2017-02-18

Isolate database
Isolates: 36194
Last updated: 2017-02-18