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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Photobacterium damselae

Photobacterium damselae

Source of isolates submitted to the Photobacterium damselae database
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This MLST scheme has been developed by Patricia Alba, Antonio Battisti and colleagues, Istituto Zooprofilattico Sperimentale delle Regione Lazio e Toscana M. Aleandri (IZSLT), Italy. It is described in Alba et al. 2016 Front Microbiol 7:1656

Database curated by patricia.albaatizslt.it (Patricia Alba).

  • Primers
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
185
Last updated:
2023-08-10

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
93
Last updated:
2023-08-11

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:
1
Last updated:
2022-10-04

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Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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