Helicobacter pylori MLST Databases

This MLST scheme uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

This database is hosted on PubMLST.org and is not affiliated with www.mlst.net. Please cite accordingly.

Information
- Primers used for amplification and sequencing
Access main databases
- Sequence/profile definitions
- Isolates
Policy document
Submission of data
Submission history
Related links and projects

BIGSdb software

Website and database managed by Keith Jolley.

The use of this database is subject to the terms of the policy document and it should be acknowledged in all publications that make use of it. The preferred format for the acknowledgement can be found in the right-hand sidebar.

The primary Helicobacter pylori MLST website is hosted at the Department of Zoology, University of Oxford, UK.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Helicobacter pylori Multi Locus Sequence Typing website (http://pubmlst.org/ helicobacter/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust and European Union.

Helicobacter pylori MLST Databases

Navigation

Citing the database

Status