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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Helicobacter cinaedi

Helicobacter cinaedi

Source of isolates submitted to the Helicobacter cinaedi database
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The MLST scheme is described in Rimbara et al. 2012 J Clin Microbiol 50:2553-60.

Database curated by rimbaraatnih.go.jp (Emiko Rimbara).

  • Primers
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
43
Last updated:
2020-10-12

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
70
Last updated:
2019-12-17

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Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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