Chlamydiales MLST Databases

This MLST site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

Information
- Primers used for amplification and sequencing
Access main databases
- Sequence/profile definitions
- Isolates
Policy document
Submission of data
Submission history

This MLST scheme was developed by Yvonne Pannekoek, Arie van der Ende and colleagues, Academic Medical Center, Amsterdam, The Netherlands.

Database curated by Yvonne Pannekoek.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Chlamydiales MLST website (http://pubmlst.org/ chlamydiales/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 210
Profiles (MLST): 68
Last updated: 2013-03-20

Isolate database
Isolates: 283
Last updated: 2013-03-19