Clostridium botulinum MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

Information
- Primers and protocol used for amplification and sequencing - coming soon
Access main databases
- Sequence and profile definitions
- Isolates database
Policy document
Submission of data

This MLST scheme was developed by Guangyun Lin and Mark Jacobson, University of Wisconsin, Madison, WI, USA.

Database curated by Carolina Lúquez.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Clostridium botulinum MLST website (http://pubmlst.org/ cbotulinum/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 110
Profiles:
MLST: 36
Extended MLST: 0

Isolate database
Isolates: 139
Last updated: 2013-03-27