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PubMLST
Public databases for molecular typing
and microbial genome diversity

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  3. Blastocystis spp.

Blastocystis spp.

Source of isolates submitted to the Blastocystis spp. database
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ST3 and ST4 MLST schemes were developed by runatssi.dk (Rune Stensvold). The 18S typing scheme was developed by a.bartatamc.uva.nl (Aldert Bart).

Database curated by runatssi.dk (Rune Stensvold) and Graham.Clarkatlshtm.ac.uk (Graham Clark.)

  • More information
The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:
426
Last updated:
2024-05-29

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Isolates:
781
Last updated:
2024-05-29

Contact

Get in touch with us if you have any comments or suggestions concerning the website and the databases.

Cite us

Please cite Jolley et al. 2018 Wellcome Open Res 3:124 if you use data or analysis from PubMLST in your publications.

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Wellcome Trust

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