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Multi Locus Sequence Typing of Campylobacter

Information

Experimental Conditions

MLST

These protocols are for guidance only and you may need to optimise them for your particular laboratory.

porA (MOMP)

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Campylobacter Multi Locus Sequence Typing website (https://pubmlst.org/ campylobacter/) sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

jejuni/coli

Sequence database
Sequences: 795334
Profiles:
MLST: 8852
C. jejuni / C. coli cgMLST v1.0: 15392

Isolate database
Isolates: 51542
Last updated: 2017-04-26

Non-jejuni/coli

Sequence database
Sequences: 2721
Profiles:
C. concisus/curvus MLST: 130
C. fetus MLST: 69
C. helveticus MLST: 9
C. hyointestinalis MLST: 131
C. insulaenigrae MLST: 43
C. lanienae MLST: 171
C. lari MLST: 65
C. sputorum MLST: 16
C. upsaliensis MLST: 203

Isolate database
Isolates: 349
Last updated: 2017-02-24