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Profile information for cgST-3 (cgMLST)

cgST
3
SPNE00001 (dnaA)
6
SPNE00002 (dnaN)
24
SPNE00003 (ychF)
37
SPNE00004 (pth)
1
SPNE00005 (mfd)
61
SPNE00006
1
SPNE00007
3
SPNE00008
1
SPNE00009 (tilS)
41
SPNE00010 (hpt)
6
SPNE00011 (ftsH)
1
SPNE00012
1
SPNE00013 (purA)
28
SPNE00014
1
SPNE00015 (dut)
3
SPNE00016
1
SPNE00017 (radA)
1
SPNE00018
28
SPNE00019
6
SPNE00020 (polA)
1
SPNE00021
1
SPNE00022
1
SPNE00023 (araT/aspC)
1
SPNE00024 (recO)
2
SPNE00025 (plsX)
1
SPNE00026 (acpP)
1
SPNE00027 (comB)
1
SPNE00028 (purC)
23
SPNE00029 (purL)
1
SPNE00030 (purF)
1
SPNE00031 (purM)
1
SPNE00032 (purN)
1
SPNE00033 (vanZ)
1
SPNE00034 (purH)
1
SPNE00035 (purD)
1
SPNE00036 (purE)
1
SPNE00037 (purK)
54
SPNE00038 (purB)
37
SPNE00039 (strH)
1
SPNE00040
17
SPNE00041 (bgaC)
56
SPNE00042
2
SPNE00043
3
SPNE00044
12
SPNE00045
11
SPNE00046 (agaS)
53
SPNE00047 (galM)
51
SPNE00048
1
SPNE00049
1
SPNE00050 (trkH)
15
SPNE00051 (trkA)
1
SPNE00052
4
SPNE00053
16
SPNE00054
44
SPNE00055 (rpsD)
8
SPNE00056
33
SPNE00057
2
SPNE00058
54
SPNE00059
34
SPNE00060
58
SPNE00061
1
SPNE00062
1
SPNE00063
1
SPNE00064
12
SPNE00065
1
SPNE00066
N
SPNE00067 (pglF/capD)
1
SPNE00068 (gph)
1
SPNE00069 (sdaAA/sdaA/sdhA)
11
SPNE00070 (sdaAB/sdaB/sdhB)
1
SPNE00071
N
SPNE00072 (trmU/mnmA)
1
SPNE00073
48
SPNE00074 (gidA)
62
SPNE00075
1
SPNE00076
1
SPNE00077
1
SPNE00078 (rimI)
1
SPNE00079
1
SPNE00080
26
SPNE00081
1
SPNE00082
1
SPNE00083 (dapE)
1
SPNE00084
62
SPNE00085
6
SPNE00086
1
SPNE00087
28
SPNE00088
1
SPNE00089
1
SPNE00090
1
SPNE00091
1
SPNE00092
24
SPNE00093
5
SPNE00094
17
SPNE00095 (mutL/hexB)
46
SPNE00096 (ribH)
12
SPNE00097 (ribA/ribAB)
1
SPNE00098 (ribE)
1
SPNE00099 (ribD)
1
SPNE00100 (ruvA)
19
SPNE00101 (tag)
1
SPNE00102
35
SPNE00103
8
SPNE00104 (corA)
N
SPNE00105 (uvrA)
65
SPNE00106 (pepP)
31
SPNE00107 (spxA/arsC)
5
SPNE00108
1
SPNE00109
1
SPNE00110
10
SPNE00111
3
SPNE00112 (folC)
1
SPNE00113
1
SPNE00114 (cls)
3
SPNE00115 (ccs/ccs4)
25
SPNE00116 (nrdD)
1
SPNE00117
17
SPNE00118 (nrdG)
1
SPNE00119
1
SPNE00120 (rpsJ)
1
SPNE00121 (rplC)
3
SPNE00122 (rplD)
1
SPNE00123 (rplW)
2
SPNE00124 (rplB)
7
SPNE00125 (rpsS)
1
SPNE00126 (rplV)
2
SPNE00127 (rpsC)
1
SPNE00128 (rplP)
1
SPNE00129 (rpmC)
1
SPNE00130 (rpsQ)
1
SPNE00131 (rplN)
1
SPNE00132 (rplX)
2
SPNE00133 (rplE)
1
SPNE00134 (rpsN)
1
SPNE00135 (rpsH)
1
SPNE00136 (rplF)
15
SPNE00137 (rplR)
1
SPNE00138 (rpsE)
1
SPNE00139 (rplO)
1
SPNE00140 (secY)
1
SPNE00141 (adk)
1
SPNE00142 (infA)
1
SPNE00143 (rpsM)
6
SPNE00144 (rpsK)
1
SPNE00145 (rpoA)
2
SPNE00146 (rplQ)
1
SPNE00147
10
SPNE00148
1
SPNE00149
1
SPNE00150
22
SPNE00151
1
SPNE00152
1
SPNE00153
11
SPNE00154
1
SPNE00155
1
SPNE00156
1
SPNE00157
1
SPNE00158 (gldA)
25
SPNE00159 (leuS)
1
SPNE00160 (ruvB)
44
SPNE00161 (uppS)
5
SPNE00162 (cdsA)
1
SPNE00163 (eep)
37
SPNE00164 (proS)
1
SPNE00165
1
SPNE00166 (glmS)
1
SPNE00167
N
SPNE00168 (pulA/spuA)
1
SPNE00169 (rpsL)
1
SPNE00170 (rpsG)
1
SPNE00171 (fusA)
1
SPNE00172 (polC)
1
SPNE00173 (pepS)
1
SPNE00174 (rsuA/rsuA1)
1
SPNE00175 (pepC)
1
SPNE00176 (manN)
3
SPNE00177 (manM)
12
SPNE00178 (manL)
1
SPNE00179 (adhP)
1
SPNE00180
1
SPNE00181
1
SPNE00182
51
SPNE00183 (folP/sulA)
N
SPNE00184 (folC/sulB)
1
SPNE00185 (folE/sulC)
2
SPNE00186 (folK/sulD)
47
SPNE00187
15
SPNE00188 (rplM)
2
SPNE00189 (rpsI)
1
SPNE00190 (btuE)
1
SPNE00191 (hysA)
1
SPNE00192 (eda/kdgK)
9
SPNE00193 (kdgK)
1
SPNE00194 (rpiB)
1
SPNE00195
1
SPNE00196
1
SPNE00197 (ugl)
14
SPNE00198
33
SPNE00199
6
SPNE00200
1
SPNE00201 (yajC/yajC1)
1
SPNE00202
1
SPNE00203 (regR)
1
SPNE00204 (rsmH/yllC/mraW)
60
SPNE00205 (ftsL)
18
SPNE00206 (pbpX)
1
SPNE00207 (mraY)
1
SPNE00208 (clpL)
1
SPNE00209 (luxS)
4
SPNE00210
1
SPNE00211 (dexB)
45
SPNE00212 (cps4C)
1
SPNE00213
83
SPNE00214 (pbp1A)
73
SPNE00215 (recU)
1
SPNE00216
35
SPNE00217 (gpsB)
7
SPNE00218
1
SPNE00219 (mapZ)
69
SPNE00220 (gnd)
1
SPNE00221 (csrR)
1
SPNE00222 (mvk/mvaK1)
1
SPNE00223 (mvaD)
49
SPNE00224 (mvaK2)
1
SPNE00225 (fni)
1
SPNE00226 (yvqF)
1
SPNE00227
55
SPNE00228
1
SPNE00229 (tig)
1
SPNE00230 (recD/recD2)
1
SPNE00231 (spi/lepB)
8
SPNE00232 (rnhC)
24
SPNE00233
3
SPNE00234
5
SPNE00235 (mutS2)
1
SPNE00236 (agcS/dagA)
1
SPNE00237 (ahpD/mip)
1
SPNE00238
29
SPNE00239 (serS)
1
SPNE00240
1
SPNE00241 (lysC)
1
SPNE00242 (phaB)
1
SPNE00243 (marR)
3
SPNE00244 (fabH)
1
SPNE00245 (acpP)
1
SPNE00246 (fabK)
11
SPNE00247 (fabD)
6
SPNE00248 (fabG)
1
SPNE00249 (fabF)
6
SPNE00250 (accB)
1
SPNE00251 (fabZ)
1
SPNE00252 (accC)
13
SPNE00253 (accD)
1
SPNE00254 (accA)
24
SPNE00255 (nusB)
3
SPNE00256
1
SPNE00257 (efp)
8
SPNE00258 (gatB)
1
SPNE00259 (gatA)
1
SPNE00260 (gatC)
1
SPNE00261 (prfC)
1
SPNE00262
1
SPNE00263
48
SPNE00264 (ilvB)
22
SPNE00265 (ilvN)
7
SPNE00266 (ilvC)
23
SPNE00267
17
SPNE00268 (ilvA)
40
SPNE00269
1
SPNE00270 (glnQ)
4
SPNE00271 (glnP/glnH)
9
SPNE00272
1
SPNE00273 (uppP/bacA)
1
SPNE00274 (dinB/dinP)
41
SPNE00275 (pflB/pfl)
1
SPNE00276
1
SPNE00277 (trkH)
1
SPNE00278 (trkA)
1
SPNE00279
1
SPNE00280
30
SPNE00281
1
SPNE00282
1
SPNE00283 (trmL/cspR)
3
SPNE00284
1
SPNE00285
1
SPNE00286
5
SPNE00287 (rpoE)
1
SPNE00288 (pyrG)
1
SPNE00289
1
SPNE00290 (pgk)
1
SPNE00291
1
SPNE00292 (glnR)
1
SPNE00293 (glnA)
30
SPNE00294 (hrcA)
1
SPNE00295 (grpE)
6
SPNE00296 (dnaK)
52
SPNE00297 (dnaJ)
1
SPNE00298
1
SPNE00299
1
SPNE00300
23
SPNE00301
1
SPNE00302 (blpT)
1
SPNE00303 (blpS)
1
SPNE00304 (blpR)
1
SPNE00305 (blpH)
47
SPNE00306 (blpY)
1
SPNE00307 (blpZ)
N
SPNE00308 (pncP)
1
SPNE00309
4
SPNE00310
4
SPNE00311 (rimP)
4
SPNE00312 (nusA)
1
SPNE00313
1
SPNE00314
1
SPNE00315 (infB)
70
SPNE00316 (rbfA)
1
SPNE00317
1
SPNE00318
1
SPNE00319
13
SPNE00320
1
SPNE00321
1
SPNE00322 (valS)
1
SPNE00323 (licT)
9
SPNE00324
1
SPNE00325 (bglH/bglA-2)
15
SPNE00326 (pheS)
14
SPNE00327
1
SPNE00328 (pheT)
N
SPNE00329
24
SPNE00330 (metE)
1
SPNE00331 (metF)
1
SPNE00332 (pnp)
1
SPNE00333 (cysE)
2
SPNE00334
1
SPNE00335 (cysS)
55
SPNE00336
1
SPNE00337
1
SPNE00338 (vex1)
1
SPNE00339 (vex2)
1
SPNE00340 (vex3)
44
SPNE00341 (vncR)
6
SPNE00342 (vncS)
49
SPNE00343 (fba)
3
SPNE00344
1
SPNE00345 (recJ)
68
SPNE00346
1
SPNE00347 (estA)
18
SPNE00348 (murM)
1
SPNE00349 (murN)
10
SPNE00350
5
SPNE00351 (uvrC)
17
SPNE00352
1
SPNE00353 (nrd)
11
SPNE00354 (pepV)
1
SPNE00355
4
SPNE00356 (brnQ)
1
SPNE00357
1
SPNE00358
37
SPNE00359 (rplK)
1
SPNE00360 (rplA)
21
SPNE00361
11
SPNE00362 (prtA)
1
SPNE00363
53
SPNE00364 (bgaA)
1
SPNE00365
25
SPNE00366
1
SPNE00367
11
SPNE00368
1
SPNE00369
1
SPNE00370 (ccdA/ccdA-1)
13
SPNE00371
1
SPNE00372 (msrA/msrA-1)
3
SPNE00373
1
SPNE00374
1
SPNE00375
1
SPNE00376 (pabB)
1
SPNE00377 (gki)
1
SPNE00378 (thyA)
7
SPNE00379 (miaA)
1
SPNE00380 (hflX)
48
SPNE00381
1
SPNE00382
1
SPNE00383
1
SPNE00384 (cpsY)
1
SPNE00385
2
SPNE00386
5
SPNE00387 (rsuA/rsuA2)
1
SPNE00388 (typA)
45
SPNE00389
9
SPNE00390 (murD)
1
SPNE00391 (murG)
1
SPNE00392 (divIB)
28
SPNE00393 (pyrF)
45
SPNE00394 (pyrE)
1
SPNE00395
39
SPNE00396
32
SPNE00397
14
SPNE00398 (lysS)
1
SPNE00399
1
SPNE00400 (thiM/thiM1)
1
SPNE00401 (thiE/thiE1)
16
SPNE00402
6
SPNE00403
1
SPNE00404
1
SPNE00405 (tenA)
9
SPNE00406 (thiW)
1
SPNE00407 (thiM/thiM2)
1
SPNE00408 (thiE/thiE2)
1
SPNE00409 (thiD)
14
SPNE00410
1
SPNE00411
1
SPNE00412
1
SPNE00413 (spxB)
44
SPNE00414
26
SPNE00415 (manA/pmi)
1
SPNE00416
42
SPNE00417
1
SPNE00418
9
SPNE00419
3
SPNE00420 (upp)
1
SPNE00421 (clpP)
1
SPNE00422
1
SPNE00423 (livJ)
1
SPNE00424 (livH)
13
SPNE00425 (livM)
43
SPNE00426 (livG)
2
SPNE00427 (livF)
38
SPNE00428
2
SPNE00429 (prfB)
34
SPNE00430 (ftsE)
1
SPNE00431 (ftsX)
14
SPNE00432
1
SPNE00433
40
SPNE00434 (rheB/cshB)
1
SPNE00435 (metK)
1
SPNE00436
2
SPNE00437 (holA)
1
SPNE00438 (sodA)
1
SPNE00439
26
SPNE00440
1
SPNE00441
1
SPNE00442 (ppiA)
22
SPNE00443
N
SPNE00444 (rpsP)
2
SPNE00445
1
SPNE00446 (rimM)
1
SPNE00447 (trmD)
31
SPNE00448
3
SPNE00449
1
SPNE00450
2
SPNE00451
19
SPNE00452 (gor)
49
SPNE00453
53
SPNE00454
19
SPNE00455
1
SPNE00456 (metG)
1
SPNE00457
2
SPNE00458
38
SPNE00459
1
SPNE00460
1
SPNE00461
1
SPNE00462
1
SPNE00463
1
SPNE00464 (pepN)
63
SPNE00465 (ciaR)
2
SPNE00466 (ciaH)
1
SPNE00467
1
SPNE00468
1
SPNE00469 (dinG)
1
SPNE00470 (rodA)
40
SPNE00471 (thiJ)
1
SPNE00472
1
SPNE00473 (gyrB)
1
SPNE00474 (ezrA)
1
SPNE00475
3
SPNE00476 (clpE)
55
SPNE00477
1
SPNE00478 (folD)
14
SPNE00479
1
SPNE00480 (rpiA)
1
SPNE00481 (deoB)
17
SPNE00482 (punA)
33
SPNE00483 (deoD)
6
SPNE00484
1
SPNE00485 (rpsT)
1
SPNE00486 (coaA)
27
SPNE00487
5
SPNE00488 (pdp)
1
SPNE00489 (deoC)
1
SPNE00490 (cdd)
1
SPNE00491
19
SPNE00492
35
SPNE00493
N
SPNE00494
1
SPNE00495
5
SPNE00496 (parE)
1
SPNE00497 (parC)
35
SPNE00498 (ilvE)
1
SPNE00499
38
SPNE00500
1
SPNE00501
1
SPNE00502
1
SPNE00503 (rpsA)
30
SPNE00504
8
SPNE00505 (dnaX)
1
SPNE00506 (sufC)
1
SPNE00507 (sufD)
1
SPNE00508 (sufS/csdB)
1
SPNE00509
5
SPNE00510 (sufB)
26
SPNE00511 (dacA)
1
SPNE00512
3
SPNE00513
4
SPNE00514 (pfkB/fruB)
N
SPNE00515 (fruA)
1
SPNE00516 (ftsK)
1
SPNE00517
2
SPNE00518
1
SPNE00519 (thiI)
2
SPNE00520 (argR)
1
SPNE00521 (pepX/pepXP)
1
SPNE00522 (dnaE)
1
SPNE00523 (pfkA/pfk)
12
SPNE00524 (pyk)
N
SPNE00525
1
SPNE00526
N
SPNE00527
8
SPNE00528
15
SPNE00529
1
SPNE00530
1
SPNE00531
1
SPNE00532
3
SPNE00533
1
SPNE00534
1
SPNE00535 (speA/cad)
13
SPNE00536 (speE)
1
SPNE00537
1
SPNE00538 (nspC)
1
SPNE00539
1
SPNE00540
1
SPNE00541
1
SPNE00542
1
SPNE00543
30
SPNE00544
1
SPNE00545 (lspA)
1
SPNE00546 (rluD)
1
SPNE00547 (cbpE)
54
SPNE00548 (proB)
38
SPNE00549 (proA)
1
SPNE00550 (proC)
13
SPNE00551 (tmk)
1
SPNE00552 (holB)
1
SPNE00553 (yabA)
12
SPNE00554
45
SPNE00555 (trmFO/gid/gidA)
23
SPNE00556 (pyrH)
1
SPNE00557 (frr)
1
SPNE00558
1
SPNE00559
1
SPNE00560
11
SPNE00561
1
SPNE00562 (comEA/celA)
1
SPNE00563 (comEC/celB)
N
SPNE00564
9
SPNE00565 (infC)
23
SPNE00566 (rplT)
2
SPNE00567 (gloA/lguL)
6
SPNE00568 (pyrK)
1
SPNE00569 (pyrD)
27
SPNE00570 (lytB)
N
SPNE00571 (fbpA/flpA/pavA)
53
SPNE00572 (ybeY)
1
SPNE00573 (dgkA/dgk)
1
SPNE00574 (era)
9
SPNE00575 (fpg)
54
SPNE00576 (coaE)
1
SPNE00577 (pmrA)
49
SPNE00578 (secG)
1
SPNE00579 (rnr)
1
SPNE00580 (smpB)
1
SPNE00581 (tehB)
1
SPNE00582 (coiA)
12
SPNE00583 (pepF/pepB)
57
SPNE00584
1
SPNE00585
1
SPNE00586
25
SPNE00587
1
SPNE00588
1
SPNE00589
1
SPNE00590 (glmU/gcaD)
1
SPNE00591
18
SPNE00592
7
SPNE00593 (mtnN/pfs)
1
SPNE00594
1
SPNE00595 (dnaQ)
1
SPNE00596
1
SPNE00597 (ccdA)
2
SPNE00598
12
SPNE00599 (yfnA)
1
SPNE00600 (lmb)
1
SPNE00601 (phtE)
1
SPNE00602 (pepT)
1
SPNE00603 (hemH)
1
SPNE00604 (mscL)
1
SPNE00605 (mesH)
1
SPNE00606 (ccl)
9
SPNE00607 (asd)
1
SPNE00608 (dapA)
19
SPNE00609 (mnmE/thdF/trmE)
1
SPNE00610 (tdk)
N
SPNE00611 (prfA)
4
SPNE00612
1
SPNE00613 (rimN)
1
SPNE00614
1
SPNE00615 (glyA)
1
SPNE00616
19
SPNE00617 (pvaA)
31
SPNE00618
1
SPNE00619 (rumA)
1
SPNE00620
2
SPNE00621
1
SPNE00622
16
SPNE00623
1
SPNE00624
1
SPNE00625
1
SPNE00626 (ftsW)
38
SPNE00627 (ppc)
1
SPNE00628
1
SPNE00629
15
SPNE00630
1
SPNE00631 (dnaG)
62
SPNE00632 (rpoD)
1
SPNE00633
1
SPNE00634 (cpoA)
31
SPNE00635
46
SPNE00636 (obg)
1
SPNE00637 (murA/murZ/murA1)
30
SPNE00638
1
SPNE00639
1
SPNE00640 (map)
1
SPNE00641 (pcrA)
1
SPNE00642 (radC)
1
SPNE00643
35
SPNE00644 (rex)
20
SPNE00645
1
SPNE00646 (iscS/nifS)
1
SPNE00647 (prs/prsA2)
23
SPNE00648
1
SPNE00649
1
SPNE00650 (nadK/ppnK)
1
SPNE00651 (rluD)
1
SPNE00652 (pta)
21
SPNE00653
8
SPNE00654 (rplU)
1
SPNE00655
1
SPNE00656 (rpmA)
1
SPNE00657
5
SPNE00658
26
SPNE00659
1
SPNE00660 (hlpA/hup)
1
SPNE00661
1
SPNE00662
45
SPNE00663 (ligA)
1
SPNE00664
1
SPNE00665 (gapN)
1
SPNE00666 (glgB)
1
SPNE00667 (glgC)
35
SPNE00668 (glgD)
N
SPNE00669 (glgA)
1
SPNE00670
1
SPNE00671 (eno)
14
SPNE00672 (rexB)
1
SPNE00673 (addA/rexA)
1
SPNE00674
4
SPNE00675
1
SPNE00676 (rnhB)
1
SPNE00677
40
SPNE00678 (xerS/xerC)
1
SPNE00679 (acoL/lpdA)
1
SPNE00680 (acoC)
22
SPNE00681 (acoB)
1
SPNE00682 (acoA)
20
SPNE00683
53
SPNE00684
1
SPNE00685 (pyrC)
1
SPNE00686 (mutX)
6
SPNE00687 (ung)
1
SPNE00688
1
SPNE00689 (ptsI)
1
SPNE00690 (ptsH)
2
SPNE00691 (nrdH)
1
SPNE00692 (nrdE)
22
SPNE00693 (nrdF)
1
SPNE00694 (lacR)
1
SPNE00695 (lacG)
1
SPNE00696 (lacE)
N
SPNE00697 (lacF)
1
SPNE00698 (lacT)
1
SPNE00699 (lacD)
1
SPNE00700 (lacC)
1
SPNE00701 (lacB)
28
SPNE00702 (lacA)
1
SPNE00703 (lepA)
1
SPNE00704 (pphA)
1
SPNE00705 (recN)
1
SPNE00706 (argR/ahrC)
14
SPNE00707
32
SPNE00708 (ispA)
1
SPNE00709 (xseB)
1
SPNE00710 (xseA)
1
SPNE00711 (udk)
2
SPNE00712
3
SPNE00713 (truB)
1
SPNE00714
47
SPNE00715 (nirC)
1
SPNE00716 (srtA)
10
SPNE00717 (gyrA)
1
SPNE00718 (ldh)
2
SPNE00719
22
SPNE00720
1
SPNE00721 (vicX)
1
SPNE00722 (vicK)
35
SPNE00723 (vicR)
2
SPNE00724 (mutY)
1
SPNE00725 (fhs)
1
SPNE00726
1
SPNE00727
1
SPNE00728
3
SPNE00729 (niaX)
7
SPNE00730
1
SPNE00731
9
SPNE00732
N
SPNE00733 (uvrB)
1
SPNE00734
1
SPNE00735 (gdh/zwf)
1
SPNE00736 (ftsY)
N
SPNE00737
1
SPNE00738
18
SPNE00739 (smc)
1
SPNE00740 (rnc)
1
SPNE00741 (guaC)
1
SPNE00742
1
SPNE00743
N
SPNE00744 (cutC)
11
SPNE00745
1
SPNE00746 (topA)
55
SPNE00747
1
SPNE00748 (dprA/smf)
18
SPNE00749 (licC)
17
SPNE00750 (licB)
1
SPNE00751 (licA/pck)
1
SPNE00752
1
SPNE00753
1
SPNE00754
1
SPNE00755 (licD1)
1
SPNE00756 (licD2)
N
SPNE00757 (carB)
1
SPNE00758 (carA)
22
SPNE00759 (pyrB)
1
SPNE00760 (pyrR)
3
SPNE00761 (nth)
1
SPNE00762
1
SPNE00763
1
SPNE00764 (htpX)
1
SPNE00765 (lemA)
1
SPNE00766 (rsmG/gidB)
5
SPNE00767 (pyrP)
1
SPNE00768 (ffh)
1
SPNE00769
2
SPNE00770
1
SPNE00771
1
SPNE00772
1
SPNE00773 (rplS)
13
SPNE00774 (crcB1)
1
SPNE00775 (crcB2)
3
SPNE00776
1
SPNE00777 (fld)
1
SPNE00778
1
SPNE00779 (rpmE)
2
SPNE00780 (gdhA)
1
SPNE00781 (rplL)
4
SPNE00782 (rplJ)
1
SPNE00783
N
SPNE00784
53
SPNE00785
1
SPNE00786 (thrB)
4
SPNE00787 (hom)
40
SPNE00788 (mecA)
21
SPNE00789
11
SPNE00790
40
SPNE00791
1
SPNE00792
1
SPNE00793 (licD3)
1
SPNE00794 (msrR)
1
SPNE00795 (pheA)
1
SPNE00796 (aroK)
1
SPNE00797 (aroA)
1
SPNE00798
1
SPNE00799 (tyrA)
34
SPNE00800 (aroC)
1
SPNE00801 (aroB)
39
SPNE00802 (aroE)
44
SPNE00803 (aroD)
1
SPNE00804
1
SPNE00805
1
SPNE00806 (amy)
1
SPNE00807 (alaS)
1
SPNE00808
2
SPNE00809 (potD)
1
SPNE00810 (potC)
1
SPNE00811 (potB)
1
SPNE00812 (potA)
1
SPNE00813 (murB)
34
SPNE00814
33
SPNE00815
1
SPNE00816
1
SPNE00817 (phoU)
3
SPNE00818 (pstB1)
3
SPNE00819 (pstB2)
22
SPNE00820 (pstA)
29
SPNE00821 (pstC)
25
SPNE00822 (pstS)
23
SPNE00823
1
SPNE00824
1
SPNE00825
1
SPNE00826 (spx/spxA)
1
SPNE00827
1
SPNE00828 (nagD/yutF)
31
SPNE00829
1
SPNE00830
1
SPNE00831
2
SPNE00832
14
SPNE00833 (lgt)
29
SPNE00834 (hprK/ptsK)
1
SPNE00835 (nagB)
1
SPNE00836 (queA)
1
SPNE00837
1
SPNE00838 (nadE)
28
SPNE00839
1
SPNE00840
1
SPNE00841
2
SPNE00842
N
SPNE00843 (guaA)
10
SPNE00844
1
SPNE00845
1
SPNE00846
41
SPNE00847 (cppA)
1
SPNE00848
22
SPNE00849
1
SPNE00850 (def)
1
SPNE00851 (trmH)
1
SPNE00852 (trxB)
1
SPNE00853
1
SPNE00854
18
SPNE00855
1
SPNE00856
3
SPNE00857 (ogt)
N
SPNE00858
1
SPNE00859
3
SPNE00860
4
SPNE00861 (pdxT)
12
SPNE00862 (pdxS)
1
SPNE00863 (nox)
1
SPNE00864 (apbE)
1
SPNE00865
1
SPNE00866
41
SPNE00867
1
SPNE00868 (glyS)
55
SPNE00869 (glyQ)
1
SPNE00870
1
SPNE00871 (pgdA)
1
SPNE00872 (mocA)
1
SPNE00873
1
SPNE00874 (tuf/tufA)
14
SPNE00875 (gla/glpF)
21
SPNE00876 (pgm)
1
SPNE00877 (bta)
1
SPNE00878 (glnH/aatB)
28
SPNE00879 (glnQ)
27
SPNE00880 (glnP)
23
SPNE00881
9
SPNE00882
22
SPNE00883
4
SPNE00884 (atpC)
1
SPNE00885 (atpD)
31
SPNE00886 (atpG)
1
SPNE00887 (atpA)
1
SPNE00888 (atpH)
1
SPNE00889 (atpF)
1
SPNE00890 (atpB)
1
SPNE00891
N
SPNE00892 (greA)
18
SPNE00893
21
SPNE00894
2
SPNE00895
1
SPNE00896 (murC)
1
SPNE00897
10
SPNE00898 (snf)
66
SPNE00899 (patB)
1
SPNE00900 (metB)
1
SPNE00901 (aliB)
52
SPNE00902 (ytgP)
10
SPNE00903 (murE)
1
SPNE00904
1
SPNE00905 (ppaC)
28
SPNE00906
1
SPNE00907
1
SPNE00908
1
SPNE00909
1
SPNE00910 (rpsR)
2
SPNE00911 (rpsF)
1
SPNE00912 (asnS)
42
SPNE00913 (aspB)
1
SPNE00914
2
SPNE00915
1
SPNE00916
1
SPNE00917
1
SPNE00918 (def1)
1
SPNE00919
3
SPNE00920 (pacL)
1
SPNE00921
1
SPNE00922
1
SPNE00923 (cca)
233
SPNE00924 (dapB)
1
SPNE00925
1
SPNE00926 (glmM)
1
SPNE00927
5
SPNE00928
1
SPNE00929 (trxB1)
41
SPNE00930 (whiA)
40
SPNE00931
1
SPNE00932
1
SPNE00933 (aldR/tdcF)
1
SPNE00934 (engB)
1
SPNE00935 (clpX)
28
SPNE00936 (folA)
1
SPNE00937 (dpr/dps)
1
SPNE00938 (lytC)
22
SPNE00939 (tpi/tpiA)
12
SPNE00940
1
SPNE00941 (metA)
1
SPNE00942 (apt)
2
SPNE00943
8
SPNE00944 (msmK/msmX)
11
SPNE00945
1
SPNE00946 (codY)
3
SPNE00947 (cshA)
1
SPNE00948 (oxlT)
37
SPNE00949 (merA)
48
SPNE00950
46
SPNE00951 (cobQ)
5
SPNE00952 (pepQ)
1
SPNE00953 (hmpT)
3
SPNE00954 (thiD/pdxL)
1
SPNE00955 (truA)
1
SPNE00956
14
SPNE00957
1
SPNE00958 (phnA)
1
SPNE00959 (cmk)
2
SPNE00960
1
SPNE00961 (fer)
1
SPNE00962 (csbB/gtrB)
1
SPNE00963 (galE)
1
SPNE00964
1
SPNE00965
35
SPNE00966
25
SPNE00967 (ctpE)
1
SPNE00968
17
SPNE00969 (cadD)
N
SPNE00970 (rpsO)
4
SPNE00971 (thrS)
35
SPNE00972
1
SPNE00973
1
SPNE00974
40
SPNE00975
4
SPNE00976
44
SPNE00977
4
SPNE00978 (relA)
1
SPNE00979
2
SPNE00980 (pepO)
1
SPNE00981 (psaB/mtsB)
1
SPNE00982 (psaC/mtsC)
9
SPNE00983 (psaA/mtsA/sitA)
2
SPNE00984 (tpx/psaD)
3
SPNE00985
1
SPNE00986
35
SPNE00987 (gpmA)
33
SPNE00988 (ileS)
1
SPNE00989 (divIVA)
7
SPNE00990 (ylmH)
1
SPNE00991 (ylmG)
9
SPNE00992 (ylmF/sepF)
1
SPNE00993 (ylmE)
1
SPNE00994 (ftsZ)
1
SPNE00995 (ftsA)
1
SPNE00996
5
SPNE00997 (murF)
1
SPNE00998 (ddl/ddlA)
1
SPNE00999 (recR)
1
SPNE01000 (pbp2b/penA)
1
SPNE01001
N
SPNE01002 (glk)
40
SPNE01003
36
SPNE01004
N
SPNE01005
1
SPNE01006
12
SPNE01007
19
SPNE01008
41
SPNE01009
1
SPNE01010
1
SPNE01011
42
SPNE01012
38
SPNE01013 (nanA)
75
SPNE01014
1
SPNE01015 (recG)
1
SPNE01016 (alr)
46
SPNE01017 (acpS)
1
SPNE01018 (secA)
1
SPNE01019 (der/serA)
1
SPNE01020 (frp)
2
SPNE01021 (dnaI)
3
SPNE01022 (dnaB)
1
SPNE01023 (ndr)
3
SPNE01024 (yvoA)
3
SPNE01025 (natB)
1
SPNE01026 (natA)
1
SPNE01027
1
SPNE01028 (scrK)
36
SPNE01029 (scrB)
1
SPNE01030 (scrR)
1
SPNE01031 (mvaA)
3
SPNE01032 (mvaS)
1
SPNE01033
21
SPNE01034
3
SPNE01035 (stkP/prkC/pkn2/stk1)
63
SPNE01036 (phpP/stp/pppL)
20
SPNE01037 (rsmB/sun/sunL)
1
SPNE01038 (fmt)
1
SPNE01039 (priA)
1
SPNE01040 (rpoZ)
1
SPNE01041 (gmk)
1
SPNE01042
45
SPNE01043
1
SPNE01044
47
SPNE01045 (rsfS)
5
SPNE01046
1
SPNE01047
1
SPNE01048
1
SPNE01049 (yhbY)
1
SPNE01050 (yqeH)
1
SPNE01051
1
SPNE01052 (corA)
21
SPNE01053
9
SPNE01054
1
SPNE01055
N
SPNE01056
1
SPNE01057 (trxA)
1
SPNE01058 (aqpZ)
1
SPNE01059 (pepF)
1
SPNE01060
1
SPNE01061 (prmA)
3
SPNE01062
1
SPNE01063
3
SPNE01064
1
SPNE01065 (sacA)
1
SPNE01066
2
SPNE01067
1
SPNE01068
1
SPNE01069
32
SPNE01070 (trpA)
1
SPNE01071 (trpB)
1
SPNE01072 (trpF)
1
SPNE01073 (trpC)
1
SPNE01074 (trpD)
9
SPNE01075 (trpG)
1
SPNE01076 (trpE)
71
SPNE01077
20
SPNE01078
10
SPNE01079
1
SPNE01080
1
SPNE01081
1
SPNE01082
1
SPNE01083
1
SPNE01084
1
SPNE01085
1
SPNE01086 (exoA/xth)
9
SPNE01087 (xpt)
1
SPNE01088 (pbuX)
1
SPNE01089
19
SPNE01090 (galK)
1
SPNE01091 (galR)
57
SPNE01092 (adhR)
1
SPNE01093
1
SPNE01094
6
SPNE01095
1
SPNE01096 (proWX)
1
SPNE01097 (proV)
4
SPNE01098
1
SPNE01099
20
SPNE01100
1
SPNE01101 (pepA)
1
SPNE01102
36
SPNE01103
1
SPNE01104
1
SPNE01105
1
SPNE01106
1
SPNE01107
1
SPNE01108 (rluB)
16
SPNE01109 (scpB)
1
SPNE01110 (scpA)
33
SPNE01111 (xerD)
8
SPNE01112
6
SPNE01113
2
SPNE01114
1
SPNE01115 (murI)
1
SPNE01116
1
SPNE01117 (treC/dexS)
1
SPNE01118 (treB/treP)
1
SPNE01119 (treR)
15
SPNE01120 (oppF/amiF)
1
SPNE01121 (oppD/amiE)
31
SPNE01122 (amiD)
1
SPNE01123 (amiC)
25
SPNE01124 (amiA)
1
SPNE01125
3
SPNE01126 (gtfA)
58
SPNE01127 (msmG)
1
SPNE01128 (msmF)
39
SPNE01129 (msmE)
55
SPNE01130 (rafA)
1
SPNE01131 (msmR)
1
SPNE01132 (birA)
5
SPNE01133 (rumA/rlmD)
6
SPNE01134 (recX)
1
SPNE01135
2
SPNE01136 (groEL/groL)
43
SPNE01137 (groES/groS)
1
SPNE01138 (ssb/ssbB)
6
SPNE01139
1
SPNE01140
24
SPNE01141
3
SPNE01142
1
SPNE01143
1
SPNE01144
1
SPNE01145 (bcrC)
2
SPNE01146
1
SPNE01147
1
SPNE01148
N
SPNE01149 (ply)
25
SPNE01150
1
SPNE01151
1
SPNE01152
1
SPNE01153 (dinF)
1
SPNE01154 (recA)
6
SPNE01155 (cinA)
11
SPNE01156 (lytR/brpA)
2
SPNE01157
2
SPNE01158
1
SPNE01159
17
SPNE01160 (ndk)
15
SPNE01161 (rpoC)
1
SPNE01162 (rpoB)
50
SPNE01163 (hlyX)
44
SPNE01164 (endA)
23
SPNE01165 (murA)
17
SPNE01166
1
SPNE01167 (asnA)
6
SPNE01168 (ybhL)
1
SPNE01169
1
SPNE01170 (acyP)
2
SPNE01171 (yidC)
15
SPNE01172 (pflA/pflC)
1
SPNE01173 (cbf/cbf1)
18
SPNE01174
1
SPNE01175 (thiN)
1
SPNE01176 (rpe)
1
SPNE01177 (rsgA/engC)
1
SPNE01178 (ksgA)
1
SPNE01179
N
SPNE01180
1
SPNE01181
1
SPNE01182
1
SPNE01183
1
SPNE01184
39
SPNE01185
1
SPNE01186 (ccpA)
19
SPNE01187
1
SPNE01188
1
SPNE01189
1
SPNE01190
11
SPNE01191 (nusG)
3
SPNE01192 (pbp2A)
1
SPNE01193 (rluD)
23
SPNE01194 (gap/gapA)
23
SPNE01195 (nadC)
1
SPNE01196
8
SPNE01197
5
SPNE01198 (bgl)
1
SPNE01199
1
SPNE01200
1
SPNE01201
5
SPNE01202 (adhE)
1
SPNE01203
1
SPNE01204
2
SPNE01205 (yajC/yajC2)
1
SPNE01206 (ulaG)
4
SPNE01207
1
SPNE01208 (araD)
4
SPNE01209
1
SPNE01210
1
SPNE01211
21
SPNE01212
12
SPNE01213
21
SPNE01214
1
SPNE01215
N
SPNE01216 (yidC2)
1
SPNE01217 (rnpA)
1
SPNE01218 (ackA)
1
SPNE01219
1
SPNE01220 (comGG)
13
SPNE01221 (comGF)
1
SPNE01222
5
SPNE01223 (cglD)
14
SPNE01224 (comGC/cglC)
1
SPNE01225 (cglB)
50
SPNE01226 (comGA/cglA)
20
SPNE01227
1
SPNE01228 (adh)
1
SPNE01229 (nagA)
8
SPNE01230
1
SPNE01231 (tgt)
1
SPNE01232
26
SPNE01233
51
SPNE01234
4
SPNE01235
1
SPNE01236 (thrC)
1
SPNE01237
1
SPNE01238
8
SPNE01239 (gltX)
1
SPNE01240 (pgi)
1
SPNE01241 (guaA)
1
SPNE01242
44
SPNE01243
1
SPNE01244 (mutS/hexA)
1
SPNE01245 (argR)
1
SPNE01246 (argS)
1
SPNE01247 (phoP/pnpR)
2
SPNE01248 (phoR/pnpS)
1
SPNE01249 (pstS)
3
SPNE01250 (pstC)
19
SPNE01251 (pstA)
15
SPNE01252 (pstB)
6
SPNE01253 (phoU)
3
SPNE01254 (gpsA)
1
SPNE01255 (galU)
5
SPNE01256
19
SPNE01257
1
SPNE01258 (hipO)
1
SPNE01259 (dapD)
1
SPNE01260
14
SPNE01261 (pbp1B)
67
SPNE01262 (tyrS)
45
SPNE01263 (ctpC)
55
SPNE01264
1
SPNE01265 (rrmA)
1
SPNE01266 (malP/glgP)
1
SPNE01267 (malQ)
1
SPNE01268 (malX/mdxE)
N
SPNE01269 (malC)
21
SPNE01270 (malD)
2
SPNE01271 (malA)
1
SPNE01272 (malR)
6
SPNE01273
1
SPNE01274 (aspS)
1
SPNE01275
1
SPNE01276
1
SPNE01277
1
SPNE01278
20
SPNE01279
1
SPNE01280 (hisS)
1
SPNE01281
N
SPNE01282
5
SPNE01283 (ilvD)
20
SPNE01284 (tktC)
1
SPNE01285 (tktN)
46
SPNE01286
50
SPNE01287
1
SPNE01288
62
SPNE01289
23
SPNE01290
1
SPNE01291
1
SPNE01292
1
SPNE01293
62
SPNE01294
71
SPNE01295
59
SPNE01296 (arcA)
44
SPNE01297 (argF/arcB)
1
SPNE01298 (arcC)
1
SPNE01299 (arcD)
8
SPNE01300 (arcT)
1
SPNE01301
44
SPNE01302
1
SPNE01303 (fucI)
1
SPNE01304 (fucK)
1
SPNE01305 (adcA)
64
SPNE01306 (adcB)
1
SPNE01307 (adcC)
1
SPNE01308 (adcR)
1
SPNE01309 (dltD)
1
SPNE01310 (dltC)
1
SPNE01311 (dltB)
1
SPNE01312 (dltA)
56
SPNE01313 (glpF)
9
SPNE01314 (glpD/glpO)
1
SPNE01315 (glpK)
1
SPNE01316
68
SPNE01317 (hslO)
1
SPNE01318
1
SPNE01319
45
SPNE01320
66
SPNE01321
4
SPNE01322 (clpC)
1
SPNE01323 (ctsR)
6
SPNE01324 (cysA/tauB)
4
SPNE01325 (tauA)
4
SPNE01326 (tauC)
1
SPNE01327
1
SPNE01328 (veg)
1
SPNE01329
1
SPNE01330 (rplI)
2
SPNE01331
6
SPNE01332
1
SPNE01333 (comFC)
1
SPNE01334 (comFA)
10
SPNE01335
1
SPNE01336
2
SPNE01337 (tsf)
14
SPNE01338 (rpsB)
3
SPNE01339
2
SPNE01340 (mreD)
2
SPNE01341 (mreC)
3
SPNE01342
6
SPNE01343
1
SPNE01344
4
SPNE01345 (pgsA)
2
SPNE01346
4
SPNE01347
24
SPNE01348
1
SPNE01349
1
SPNE01350 (recF)
1
SPNE01351 (guaB)
1
SPNE01352 (trpS)
4
SPNE01353
1
SPNE01354
1
SPNE01355
1
SPNE01356 (comE)
16
SPNE01357 (comD)
28
SPNE01358
1
SPNE01359 (htrA)
1
SPNE01360 (parB)
1
sender
Auto Definer
curator
Auto Definer
date entered
2020-02-12
datestamp
2020-02-12

Client database

PubMLST isolates
Contains data for a collection of isolates that represent the total known diversity of S. pneumoniae. For every allelic profile in the profiles database there is at least one corresponding isolate deposited here. Any isolate may be submitted to this database and consequently it should be noted that it does not represent a population sample.

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles Isolates
Sp_cgc_1000Single-linkage1000experimental314PubMLST isolates 14
Sp_cgc_500Single-linkage500experimental35PubMLST isolates 5
Sp_cgc_400Single-linkage400experimental35PubMLST isolates 5
Sp_cgc_300Single-linkage300experimental35PubMLST isolates 5
Sp_cgc_200Single-linkage200experimental34PubMLST isolates 4
Sp_cgc_100Single-linkage100experimental34PubMLST isolates 4
Sp_cgc_50Single-linkage50experimental34PubMLST isolates 4
Sp_cgc_25Single-linkage25experimental33PubMLST isolates 3
Sp_cgc_10Single-linkage10experimental33PubMLST isolates 3
Sp_cgc_5Single-linkage5experimental33PubMLST isolates 3