Full information on isolate 4600_B1_19 (id:2472)

Provenance/primary metadata

id
2472
isolate
4600_B1_19
MSSP MRSP
MRSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
67
total length
2,517,388 bp
max length
313,017 bp
mean length
37,573 bp
N50
150,639
L50
6
N90
63,462
L90
15
N95
40,257
L95
18
%GC
37.67
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
4
cpn60
13
fdh
2
pta
1
purA
1
sar
2
tuf
5
ST
2151
clonal complex
Not defined

Tools

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