Full information on isolate 4393A_19 (id:2470)

Provenance/primary metadata

id
2470
isolate
4393A_19
MSSP MRSP
MRSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
62
total length
2,527,286 bp
max length
202,289 bp
mean length
40,763 bp
N50
124,983
L50
9
N90
40,709
L90
21
N95
37,925
L95
24
%GC
37.61
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
10
cpn60
2
fdh
2
pta
1
purA
7
sar
1
tuf
2
ST
2158
clonal complex
Not defined

Tools

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