Full information on isolate 4311A_19 (id:2469)

Provenance/primary metadata

id
2469
isolate
4311A_19
MSSP MRSP
MRSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
84
total length
2,588,546 bp
max length
201,189 bp
mean length
30,817 bp
N50
126,077
L50
9
N90
34,955
L90
25
N95
21,713
L95
30
%GC
37.46
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 98%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
4
cpn60
13
fdh
2
pta
1
purA
11
sar
2
tuf
2
ST
2150
clonal complex
Not defined

Tools

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