Full information on isolate 4310A_19 (id:2468)

Provenance/primary metadata

id
2468
isolate
4310A_19
MSSP MRSP
MRSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
127
total length
2,612,298 bp
max length
290,643 bp
mean length
20,570 bp
N50
130,078
L50
8
N90
40,657
L90
19
N95
32,586
L95
22
%GC
37.45
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
5
cpn60
18
fdh
2
pta
1
purA
1
sar
3
tuf
2
ST
2154
clonal complex
Not defined

Tools

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