Full information on isolate 3867_2B_19 (id:2465)

Provenance/primary metadata

id
2465
isolate
3867_2B_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
98
total length
2,610,690 bp
max length
299,043 bp
mean length
26,640 bp
N50
168,462
L50
6
N90
42,935
L90
16
N95
29,386
L95
19
%GC
37.47
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 98%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
2
cpn60
78
fdh
2
pta
1
purA
8
sar
1
tuf
2
ST
2139
clonal complex
Not defined

Tools

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