Full information on isolate 3193B_19 (id:2461)

Provenance/primary metadata

id
2461
isolate
3193B_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
pyodermia
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
203
total length
2,514,648 bp
max length
301,429 bp
mean length
12,388 bp
N50
132,249
L50
6
N90
42,963
L90
18
N95
26,384
L95
22
%GC
37.62
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 94%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
43
cpn60
24
fdh
3
pta
8
purA
5
sar
6
tuf
2
ST
2161
clonal complex
Not defined

Tools

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