Full information on isolate 3120A_19 (id:2460)

Provenance/primary metadata

id
2460
isolate
3120A_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
164
total length
2,537,478 bp
max length
258,364 bp
mean length
15,473 bp
N50
111,633
L50
7
N90
41,428
L90
21
N95
32,513
L95
24
%GC
37.67
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
10
cpn60
2
fdh
11
pta
1
purA
7
sar
4
tuf
2
ST
2157
clonal complex
Not defined

Tools

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