Full information on isolate 3001B_19 (id:2459)

Provenance/primary metadata

id
2459
isolate
3001B_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
408
total length
2,590,593 bp
max length
217,558 bp
mean length
6,350 bp
N50
124,535
L50
8
N90
42,099
L90
20
N95
15,662
L95
24
%GC
37.59
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 98%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
4
cpn60
73
fdh
4
pta
1
purA
3
sar
2
tuf
2
ST
2148
clonal complex
Not defined

Tools

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