Full information on isolate 2614A_19 (id:2458)

Provenance/primary metadata

id
2458
isolate
2614A_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
wound
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
169
total length
2,620,693 bp
max length
273,258 bp
mean length
15,508 bp
N50
133,651
L50
7
N90
24,007
L90
23
N95
19,076
L95
29
%GC
37.42
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
1
cpn60
9
fdh
1
pta
1
purA
5
sar
1
tuf
1
ST
2134
clonal complex
Not defined

Tools

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