Full information on isolate 2440A_19 (id:2456)

Provenance/primary metadata

id
2456
isolate
2440A_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
urinary tract
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
193
total length
2,538,453 bp
max length
457,346 bp
mean length
13,153 bp
N50
135,028
L50
6
N90
40,735
L90
17
N95
19,805
L95
21
%GC
37.69
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 98%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
4
cpn60
9
fdh
6
pta
1
purA
5
sar
4
tuf
1
ST
2147
clonal complex
Not defined

Tools

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