Full information on isolate 2322_1E_19 (id:2455)

Provenance/primary metadata

id
2455
isolate
2322_1E_19
MSSP MRSP
MRSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
otitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
91
total length
2,621,755 bp
max length
334,161 bp
mean length
28,811 bp
N50
100,270
L50
8
N90
33,051
L90
24
N95
28,404
L95
28
%GC
37.34
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
2
cpn60
6
fdh
2
pta
1
purA
1
sar
5
tuf
2
ST
2137
clonal complex
Not defined

Tools

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