Full information on isolate 2320D_19 (id:2454)

Provenance/primary metadata

id
2454
isolate
2320D_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
wound
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
109
total length
2,563,314 bp
max length
274,835 bp
mean length
23,517 bp
N50
126,525
L50
7
N90
60,199
L90
19
N95
38,952
L95
22
%GC
37.58
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
11
cpn60
13
fdh
1
pta
4
purA
7
sar
1
tuf
1
ST
2159
clonal complex
Not defined

Tools

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