Full information on isolate 1292A_19 (id:2450)

Provenance/primary metadata

id
2450
isolate
1292A_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
wound
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
125
total length
2,513,458 bp
max length
334,561 bp
mean length
20,108 bp
N50
128,746
L50
7
N90
39,740
L90
20
N95
25,646
L95
24
%GC
37.57
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 98%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
5
cpn60
7
fdh
1
pta
4
purA
13
sar
2
tuf
2
ST
2152
clonal complex
Not defined

Tools

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