Full information on isolate 1276A_19 (id:2449)

Provenance/primary metadata

id
2449
isolate
1276A_19
MSSP MRSP
MSSP
country
USA
continent
North America
region
New England
year
2019
host
dog
disease
sinusitis
sender
Spencer Bruce, UAlbany
curator
Vincent Perreten, University of Berne, Switzerland (E-mail: vincent.perreten@vetsuisse.unibe.ch)
update history
1 update show details
date entered
2021-05-12
datestamp
2021-05-12

Sequence bin

contigs
125
total length
2,573,577 bp
max length
261,785 bp
mean length
20,589 bp
N50
134,048
L50
7
N90
39,117
L90
20
N95
31,546
L95
23
%GC
37.50
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus pseudintermedius Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus pseudintermedius 100%

Analysis performed: 2021-05-12

Schemes and loci

MLST

ack
1
cpn60
47
fdh
4
pta
75
purA
11
sar
1
tuf
2
ST
2132
clonal complex
Not defined

Tools

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