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Full information on isolate 33B/2 (id:4666)

Provenance/meta data

id
4666
isolate
33B/2
alias
E294 (da)
country
Denmark
continent
Europe
serotype
33B
host
human
sender
Fanrong kong, CIDMLS, ICPMR, Westmead Hospital, Australia
curator
Melissa Jansen van Rensburg, University of Oxford, UK (E-mail: Melissa.JansenvanRensburg@ndph.ox.ac.uk)
update history
8 updates show details
date entered
2007-07-31
datestamp
2020-03-12

Publications (2)

  • Brueggemann AB, Harrold CL, Rezaei Javan R, van Tonder AJ, McDonnell AJ, Edwards BA (2017). Pneumococcal prophages are diverse, but not without structure or history. Sci Rep 7:42976
  • Rezaei Javan R, van Tonder AJ, King JP, Harrold CL, Brueggemann AB (2018). Genome Sequencing Reveals a Large and Diverse Repertoire of Antimicrobial Peptides. Front Microbiol 9:2012

Sequence bin

contigs
30
total length
2,115,280 bp
max length
528,913 bp
mean length
70,510 bp
N50 contig number
5
N50 length (L50)
94,524
N90 contig number
16
N90 length (L90)
43,233
N95 contig number
19
N95 length (L95)
35,855
loci tagged
1,396
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Sp_cgc_1000cgMLSTSingle-linkage1000experimentalgroup: 7 (4508 isolates)

Schemes and loci

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Tools

Analysis: