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Full information on isolate 23B/1 (id:15438)

Provenance/meta data

id
15438
isolate
23B/1
alias
1039/41
country
Denmark
continent
Europe
year
1941
serotype
23B
host
human
penicillin
0.016
cefotaxime
0.012
comments
Unknown
sender
Kelly Wyres, Department of Zoology, University of Oxford
curator
Melissa Jansen van Rensburg, University of Oxford, UK (E-mail: Melissa.JansenvanRensburg@ndph.ox.ac.uk)
update history
13 updates show details
date entered
2012-06-01
datestamp
2020-04-03

Publications (2)

  • Brueggemann AB, Harrold CL, Rezaei Javan R, van Tonder AJ, McDonnell AJ, Edwards BA (2017). Pneumococcal prophages are diverse, but not without structure or history. Sci Rep 7:42976
  • Rezaei Javan R, van Tonder AJ, King JP, Harrold CL, Brueggemann AB (2018). Genome Sequencing Reveals a Large and Diverse Repertoire of Antimicrobial Peptides. Front Microbiol 9:2012

Sequence bin

contigs
45
total length
2,087,707 bp
max length
196,038 bp
mean length
46,394 bp
N50 contig number
8
N50 length (L50)
118,878
N90 contig number
19
N90 length (L90)
55,378
N95 contig number
21
N95 length (L95)
46,835
loci tagged
1,398
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Sp_cgc_1000cgMLSTSingle-linkage1000experimentalgroup: 11 (72 isolates)

Schemes and loci

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