PubMLST Database home Contents
Log in
Help

Full information on isolate 46/2 (id:15432)

Provenance/meta data

id
15432
isolate
46/2
alias
Eddy nr. 73
country
USA
continent
North America
year
1954
serotype
46
host
human
penicillin
0.008
cefotaxime
0.008
comments
Unknown
sender
Kelly Wyres, Department of Zoology, University of Oxford
curator
Melissa Jansen van Rensburg, University of Oxford, UK (E-mail: Melissa.JansenvanRensburg@ndph.ox.ac.uk)
update history
11 updates show details
date entered
2012-06-01
datestamp
2020-03-10

Publications (2)

  • Brueggemann AB, Harrold CL, Rezaei Javan R, van Tonder AJ, McDonnell AJ, Edwards BA (2017). Pneumococcal prophages are diverse, but not without structure or history. Sci Rep 7:42976
  • Rezaei Javan R, van Tonder AJ, King JP, Harrold CL, Brueggemann AB (2018). Genome Sequencing Reveals a Large and Diverse Repertoire of Antimicrobial Peptides. Front Microbiol 9:2012

Sequence bin

contigs
46
total length
2,145,704 bp
max length
333,855 bp
mean length
46,646 bp
N50 contig number
6
N50 length (L50)
104,428
N90 contig number
18
N90 length (L90)
40,538
N95 contig number
22
N95 length (L95)
26,074
loci tagged
1,399
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Sp_cgc_1000cgMLSTSingle-linkage1000experimentalgroup: 7 (4508 isolates)

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Analysis: