Full information on isolate ERR460138 (id:7213)

Provenance/primary metadata

id
7213
isolate
ERR460138
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR460138 www.ebi.ac.uk
rMLST database accession
98351
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
13 updates show details
date entered
2015-05-14
datestamp
2018-12-05

Sequence bin

contigs
120
total length
4,842,182 bp
max length
342,915 bp
mean length
40,352 bp
N50 contig number
13
N50 length (L50)
101,263
N90 contig number
43
N90 length (L90)
36,612
N95 contig number
51
N95 length (L95)
26,398
loci tagged
6,575

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 1 (5 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 1 (5 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 332 (4 isolates)

Schemes and loci

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