Full information on isolate ERR460151 (id:7102)

Provenance/primary metadata

id
7102
isolate
ERR460151
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR460151 www.ebi.ac.uk
rMLST database accession
97274
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
13 updates show details
date entered
2015-05-14
datestamp
2016-09-21

Sequence bin

contigs
107
total length
4,684,295 bp
max length
342,909 bp
mean length
43,779 bp
N50 contig number
12
N50 length (L50)
138,533
N90 contig number
39
N90 length (L90)
39,338
N95 contig number
46
N95 length (L95)
26,294
loci tagged
6,584

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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